Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:08:34 (3568719): wrapper (7.7.26015): starting
00:08:34 (3568719): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:08:34] Arguments: --nthreads 8
[2025-11-25 00:08:34] Threads: 8
[2025-11-25 00:08:34] Checking for CVMFS
[2025-11-25 00:08:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:08:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:08:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:08:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:08:34] 2.11.3.0 733561 26686 194524 153275 3 231 44052603 45568000 15020 130560 0 176282823 99.787 123246841 23121 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-25 00:08:34] CVMFS is ok
[2025-11-25 00:08:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:08:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:08:34] Further information can be found at the LHC@home message board.
[2025-11-25 00:08:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:08:34] Checking for apptainer binary...
[2025-11-25 00:08:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:08:34] Running /usr/bin/apptainer --version
[2025-11-25 00:08:34] apptainer version 1.4.1-1.el9
[2025-11-25 00:08:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:08:34] wns0024.triumf.lcg
[2025-11-25 00:08:34] apptainer works
[2025-11-25 00:08:34] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:08:34] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:08:34] Starting ATLAS job with PandaID=6896242944
[2025-11-25 00:08:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:16:04]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:16:04] 2025-11-25 08:15:31,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 00:16:04] 2025-11-25 08:15:31,518 | WARNING  | wrong length of table data, x=[1764058154.0, 1764058215.0, 1764058276.0, 1764058337.0, 1764058398.0], y=[1303.0, 611387.0, 345873.0, 492980.0, 229502.0] (must be s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | ..............................
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . Timing measurements:
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . get job = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . initial setup = 3 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . payload setup = 6 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . stage-in = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . payload execution = 252 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . stage-out = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | . log creation = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | ..............................
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896242944/pilotlog.txt
[2025-11-25 00:16:04] 2025-11-25 08:15:31,532 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-25 00:16:04] - Log from pilotlog.txt -
[2025-11-25 00:16:04] 2025-11-25 08:15:31,516 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896242944/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:16:04] 2025-11-25 08:15:31,517 | INFO     | extracted standard info from prmon json
[2025-11-25 00:16:04] 2025-11-25 08:15:31,517 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:16:04] 2025-11-25 08:15:31,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:16:04] 2025-11-25 08:15:31,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 00:16:04] 2025-11-25 08:15:31,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 00:16:04] 2025-11-25 08:15:31,518 | WARNING  | wrong length of table data, x=[1764058154.0, 1764058215.0, 1764058276.0, 1764058337.0, 1764058398.0], y=[1303.0, 611387.0, 345873.0, 492980.0, 229502.0] (must be s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | ..............................
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . Timing measurements:
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . get job = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . initial setup = 3 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . payload setup = 6 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . stage-in = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . payload execution = 252 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . stage-out = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | . log creation = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | ..............................
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896242944/pilotlog.txt
[2025-11-25 00:16:04] 2025-11-25 08:15:31,533 | WARNING  | 
[2025-11-25 00:16:04] [begin log extracts]
[2025-11-25 00:16:04] - Log from pilotlog.txt -
[2025-11-25 00:16:04] 2025-11-25 08:15:31,516 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896242944/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:16:04] 2025-11-25 08:15:31,517 | INFO     | extracted standard info from prmon json
[2025-11-25 00:16:04] 2025-11-25 08:15:31,517 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:16:04] 2025-11-25 08:15:31,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:16:04] 2025-11-25 08:15:31,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-25 00:16:04] 2025-11-25 08:15:31,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-25 00:16:04] 2025-11-25 08:15:31,518 | WARNING  | wrong length of table data, x=[1764058154.0, 1764058215.0, 1764058276.0, 1764058337.0, 1764058398.0], y=[1303.0, 611387.0, 345873.0, 492980.0, 229502.0] (must be s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | ..............................
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . Timing measurements:
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . get job = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . initial setup = 3 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . payload setup = 6 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . stage-in = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . payload execution = 252 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,519 | INFO     | . stage-out = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | . log creation = 0 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | ..............................
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-25 00:16:04] 2025-11-25 08:15:31,520 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896242944/pilotlog.txt
[2025-11-25 00:16:04] [end log extracts]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,533 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-25 00:16:04] 2025-11-25 08:15:31,534 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-25 00:16:04] 2025-11-25 08:15:31,603 | INFO     | 
[2025-11-25 00:16:04] 2025-11-25 08:15:31,603 | INFO     | job summary report
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | --------------------------------------------------
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | PanDA job id: 6896242944
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | task id: 47556185
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-25 00:13:17,122 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | pilot state: failed 
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | transexitcode: 65
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | exeerrorcode: 65
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | exitcode: 65
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | cpuconsumptiontime: 52 s
[2025-11-25 00:16:04] 2025-11-25 08:15:31,604 | INFO     | nevents: 0
[2025-11-25 00:16:04] 2025-11-25 08:15:31,605 | INFO     | neventsw: 0
[2025-11-25 00:16:04] 2025-11-25 08:15:31,605 | INFO     | pid: 3578930
[2025-11-25 00:16:04] 2025-11-25 08:15:31,605 | INFO     | pgrp: 3578930
[2025-11-25 00:16:04] 2025-11-25 08:15:31,605 | INFO     | corecount: 8
[2025-11-25 00:16:04] 2025-11-25 08:15:31,605 | INFO     | event service: False
[2025-11-25 00:16:04] 2025-11-25 08:15:31,605 | INFO     | sizes: {0: 2284302, 5: 2284564, 11: 2284620, 263: 2314384, 265: 2314384, 389: 2314578}
[2025-11-25 00:16:04] 2025-11-25 08:15:31,605 | INFO     | --------------------------------------------------
[2025-11-25 00:16:04] 2025-11-25 08:15:31,605 | INFO     | 
[2025-11-25 00:16:04] 2025-11-25 08:15:31,605 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-25 00:16:04] 2025-11-25 08:15:31,619 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,619 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,619 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,619 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:16:04] 2025-11-25 08:15:31,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,621 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:16:04] 2025-11-25 08:15:31,621 | INFO     | job 6896242944 has completed (purged errors)
[2025-11-25 00:16:04] 2025-11-25 08:15:31,621 | INFO     | overall cleanup function is called
[2025-11-25 00:16:04] 2025-11-25 08:15:32,629 | INFO     | --- collectZombieJob: --- 10, [3578930]
[2025-11-25 00:16:04] 2025-11-25 08:15:32,629 | INFO     | zombie collector waiting for pid 3578930
[2025-11-25 00:16:04] 2025-11-25 08:15:32,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:16:04] 2025-11-25 08:15:32,629 | INFO     | collected zombie processes
[2025-11-25 00:16:04] 2025-11-25 08:15:32,629 | INFO     | will attempt to kill all subprocesses of pid=3578930
[2025-11-25 00:16:04] 2025-11-25 08:15:32,820 | INFO     | process IDs to be killed: [3578930] (in reverse order)
[2025-11-25 00:16:04] 2025-11-25 08:15:32,876 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:16:04] 2025-11-25 08:15:32,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:16:04] 2025-11-25 08:15:32,883 | INFO     | did not find any defunct processes belonging to 3578930
[2025-11-25 00:16:04] 2025-11-25 08:15:32,890 | INFO     | did not find any defunct processes belonging to 3578930
[2025-11-25 00:16:04] 2025-11-25 08:15:32,891 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:16:04] 2025-11-25 08:15:32,891 | INFO     | ready for new job
[2025-11-25 00:16:04] 2025-11-25 08:15:32,891 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:16:04] 2025-11-25 08:15:32,893 | INFO     | ***************************************
[2025-11-25 00:16:04] 2025-11-25 08:15:32,893 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:16:04] 2025-11-25 08:15:32,893 | INFO     | ***************************************
[2025-11-25 00:16:04] 2025-11-25 08:15:32,893 | INFO     | 
[2025-11-25 00:16:04] 2025-11-25 08:15:32,895 | INFO     | architecture information:
[2025-11-25 00:16:04] 2025-11-25 08:15:32,914 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:16:04] 2025-11-25 08:15:32,927 | INFO     | cat /etc/os-release:
[2025-11-25 00:16:04] NAME="CentOS Linux"
[2025-11-25 00:16:04] VERSION="7 (Core)"
[2025-11-25 00:16:04] ID="centos"
[2025-11-25 00:16:04] ID_LIKE="rhel fedora"
[2025-11-25 00:16:04] VERSION_ID="7"
[2025-11-25 00:16:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:16:04] ANSI_COLOR="0;31"
[2025-11-25 00:16:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:16:04] HOME_URL="https://www.centos.org/"
[2025-11-25 00:16:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:16:04] 
[2025-11-25 00:16:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:16:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:16:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:16:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:16:04] 
[2025-11-25 00:16:04] 2025-11-25 08:15:32,928 | INFO     | ***************************************
[2025-11-25 00:16:04] 2025-11-25 08:15:33,432 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-25 00:16:04] 2025-11-25 08:15:33,445 | INFO     | sufficient remaining disk space (1068001918976 B)
[2025-11-25 00:16:04] 2025-11-25 08:15:33,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:16:04] 2025-11-25 08:15:33,445 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:16:04] 2025-11-25 08:15:33,445 | INFO     | update_server=False
[2025-11-25 00:16:04] 2025-11-25 08:15:33,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:16:04] 2025-11-25 08:15:33,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:16:04] 2025-11-25 08:15:33,450 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:16:04] 2025-11-25 08:15:33,450 | INFO     | aborting loop
[2025-11-25 00:16:04] 2025-11-25 08:15:33,785 | INFO     | all data control threads have been joined
[2025-11-25 00:16:04] 2025-11-25 08:15:33,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:16:04] 2025-11-25 08:15:34,049 | INFO     | all payload control threads have been joined
[2025-11-25 00:16:04] 2025-11-25 08:15:34,451 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:34,456 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:34,460 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:34,509 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:34,563 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:34,786 | INFO     | all job control threads have been joined
[2025-11-25 00:16:04] 2025-11-25 08:15:34,791 | INFO     | [data] control thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:34,924 | INFO     | [job] validate thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:34,971 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:35,055 | INFO     | [payload] control thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:35,108 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:35,154 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:35,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:16:04] 2025-11-25 08:15:35,280 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:35,545 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:35,791 | INFO     | [job] control thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:35,873 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:39,217 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:16:04] 2025-11-25 08:15:45,767 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:16:04] 2025-11-25 08:15:46,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040423544640)>', '<ExcThread(monitor, started 140040103499520)>']
[2025-11-25 00:16:04] 2025-11-25 08:15:51,593 | INFO     | all workflow threads have been joined
[2025-11-25 00:16:04] 2025-11-25 08:15:51,593 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:16:04] 2025-11-25 08:15:51,594 | INFO     | traces error code: 0
[2025-11-25 00:16:04] 2025-11-25 08:15:51,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:16:04] 2025-11-25 08:16:04,114 | INFO     | PID=3572383 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 00:16:04] 2025-11-25 08:16:04,115 | INFO     | .. there are 19 such processes running
[2025-11-25 00:16:04] 2025-11-25 08:16:04,115 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:16:04] 2025-11-25 08:16:04,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:16:04] 2025-11-25 08:16:04,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:16:04] 2025-11-25 08:16:04,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:16:04] 2025-11-25 08:16:04,116 | INFO     | [monitor] control thread has ended
[2025-11-25 00:16:04] 2025-11-25 08:16:04,405 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:16:04] 2025-11-25 08:16:04,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:16:04] 2025-11-25 08:16:04,409 [wrapper] pilotpid: 3572383
[2025-11-25 00:16:04] 2025-11-25 08:16:04,411 [wrapper] Pilot exit status: 0
[2025-11-25 00:16:04] 2025-11-25 08:16:04,418 [wrapper] pandaids: 6896242944
[2025-11-25 00:16:04] 2025-11-25 08:16:04,468 [wrapper] cleanup supervisor_pilot 3572389 3572384
[2025-11-25 00:16:04] 2025-11-25 08:16:04,491 [wrapper] Test setup, not cleaning
[2025-11-25 00:16:04] 2025-11-25 08:16:04,535 [wrapper] apfmon messages muted
[2025-11-25 00:16:04] 2025-11-25 08:16:04,568 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:16:04] 2025-11-25 08:16:04,592 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:16:04]  *** Error codes and diagnostics ***
[2025-11-25 00:16:04]     "exeErrorCode": 65,
[2025-11-25 00:16:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-25 00:16:04]     "pilotErrorCode": 1305,
[2025-11-25 00:16:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-25 00:16:04]  *** Listing of results directory ***
[2025-11-25 00:16:04] total 403456
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-25 00:16:04] -rwx------. 1 boinc boinc     36292 Nov 24 12:51 runpilot2-wrapper.sh
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc      5112 Nov 24 12:51 queuedata.json
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc       100 Nov 25 00:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:16:04] -rwxr-xr-x. 1 boinc boinc      7986 Nov 25 00:08 run_atlas
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc       105 Nov 25 00:08 job.xml
[2025-11-25 00:16:04] -rw-r--r--. 2 boinc boinc 408886875 Nov 25 00:08 EVNT.47483658._004244.pool.root.1
[2025-11-25 00:16:04] drwxrwx--x. 2 boinc boinc      4096 Nov 25 00:08 shared
[2025-11-25 00:16:04] -rw-r--r--. 2 boinc boinc    590099 Nov 25 00:08 input.tar.gz
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc      6445 Nov 25 00:08 init_data.xml
[2025-11-25 00:16:04] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:08 start_atlas.sh
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc         0 Nov 25 00:08 boinc_lockfile
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc      2783 Nov 25 00:08 pandaJob.out
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc    991830 Nov 25 00:08 agis_schedconf.cvmfs.json
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc   1516227 Nov 25 00:08 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:16:04] drwx------. 5 boinc boinc      4096 Nov 25 00:08 pilot3
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc       524 Nov 25 00:13 boinc_task_state.xml
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc       998 Nov 25 00:13 memory_monitor_summary.json
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc     51610 Nov 25 00:13 log.47556185._000080.job.log.tgz.1
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc     10331 Nov 25 00:15 heartbeat.json
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc        23 Nov 25 00:16 wrapper_checkpoint.txt
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc      8192 Nov 25 00:16 boinc_mmap_file
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc       823 Nov 25 00:16 pilotlog.txt
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc        95 Nov 25 00:16 pilot_heartbeat.json
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc    118357 Nov 25 00:16 log.47556185._000080.job.log.1
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc       186 Nov 25 00:16 output.list
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc       620 Nov 25 00:16 runtime_log
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc    194560 Nov 25 00:16 result.tar.gz
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc      8634 Nov 25 00:16 runtime_log.err
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc       644 Nov 25 00:16 dJnNDm2hsh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjCJKDmi259zm.diag
[2025-11-25 00:16:04] -rw-r--r--. 1 boinc boinc     22613 Nov 25 00:16 stderr.txt
[2025-11-25 00:16:04] No HITS result produced
[2025-11-25 00:16:04]  *** Contents of shared directory: ***
[2025-11-25 00:16:04] total 400096
[2025-11-25 00:16:04] -rw-r--r--. 2 boinc boinc 408886875 Nov 25 00:08 ATLAS.root_0
[2025-11-25 00:16:04] -rw-r--r--. 2 boinc boinc    590099 Nov 25 00:08 input.tar.gz
[2025-11-25 00:16:04] -rw-r--r--. 2 boinc boinc     15847 Nov 25 00:08 start_atlas.sh
[2025-11-25 00:16:04] -rw-------. 1 boinc boinc    194560 Nov 25 00:16 result.tar.gz
00:16:06 (3568719): run_atlas exited; CPU time 54.722172
00:16:06 (3568719): called boinc_finish(0)

</stderr_txt>
]]>

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