Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:51:26 (3746066): wrapper (7.7.26015): starting
23:51:26 (3746066): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 23:51:26] Arguments: --nthreads 8
[2025-11-24 23:51:26] Threads: 8
[2025-11-24 23:51:26] Checking for CVMFS
[2025-11-24 23:51:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 23:51:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 23:51:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 23:51:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 23:51:27] 2.11.3.0 3082052 26667 180588 153275 0 203 29281555 45568001 10700 130560 0 180852442 99.808 105520457 22597 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 23:51:27] CVMFS is ok
[2025-11-24 23:51:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:51:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:51:27] Further information can be found at the LHC@home message board.
[2025-11-24 23:51:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:51:27] Checking for apptainer binary...
[2025-11-24 23:51:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 23:51:27] Running /usr/bin/apptainer --version
[2025-11-24 23:51:27] apptainer version 1.4.1-1.el9
[2025-11-24 23:51:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:51:27] wns0019.triumf.lcg
[2025-11-24 23:51:27] apptainer works
[2025-11-24 23:51:27] Set ATHENA_PROC_NUMBER=8
[2025-11-24 23:51:27] Set ATHENA_CORE_NUMBER=8
[2025-11-24 23:51:27] Starting ATLAS job with PandaID=6896242938
[2025-11-24 23:51:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:56:48]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | wrong length of table data, x=[1764057136.0, 1764057197.0], y=[1393.0, 371058.0] (must be same and length>=4)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | ..............................
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | . Timing measurements:
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | . get job = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . initial setup = 3 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . payload setup = 8 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . stage-in = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . payload execution = 96 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . stage-out = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . log creation = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | ..............................
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896242938/pilotlog.txt
[2025-11-24 23:56:48] 2025-11-25 07:55:55,269 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 23:56:48] - Log from pilotlog.txt -
[2025-11-24 23:56:48] 2025-11-25 07:55:55,163 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896242938/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,163 | INFO     | extracted standard info from prmon json
[2025-11-24 23:56:48] 2025-11-25 07:55:55,163 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | wrong length of table data, x=[1764057136.0, 1764057197.0], y=[1393.0, 371058.0] (must be same and length>=4)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | ..............................
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | . Timing measurements:
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | . get job = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . initial setup = 3 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . payload setup = 8 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . stage-in = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . payload execution = 96 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . stage-out = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . log creation = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | ..............................
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896242938/pilotlog.txt
[2025-11-24 23:56:48] 2025-11-25 07:55:55,271 | WARNING  | 
[2025-11-24 23:56:48] [begin log extracts]
[2025-11-24 23:56:48] - Log from pilotlog.txt -
[2025-11-24 23:56:48] 2025-11-25 07:55:55,163 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896242938/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,163 | INFO     | extracted standard info from prmon json
[2025-11-24 23:56:48] 2025-11-25 07:55:55,163 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 23:56:48] 2025-11-25 07:55:55,164 | WARNING  | wrong length of table data, x=[1764057136.0, 1764057197.0], y=[1393.0, 371058.0] (must be same and length>=4)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | ..............................
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | . Timing measurements:
[2025-11-24 23:56:48] 2025-11-25 07:55:55,165 | INFO     | . get job = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . initial setup = 3 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . payload setup = 8 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . stage-in = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . payload execution = 96 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . stage-out = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | . log creation = 0 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | ..............................
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 23:56:48] 2025-11-25 07:55:55,166 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896242938/pilotlog.txt
[2025-11-24 23:56:48] [end log extracts]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,271 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,272 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 23:56:48] 2025-11-25 07:55:55,358 | INFO     | 
[2025-11-24 23:56:48] 2025-11-25 07:55:55,358 | INFO     | job summary report
[2025-11-24 23:56:48] 2025-11-25 07:55:55,358 | INFO     | --------------------------------------------------
[2025-11-24 23:56:48] 2025-11-25 07:55:55,358 | INFO     | PanDA job id: 6896242938
[2025-11-24 23:56:48] 2025-11-25 07:55:55,358 | INFO     | task id: 47556185
[2025-11-24 23:56:48] 2025-11-25 07:55:55,358 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 23:53:40,497 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 23:56:48] 2025-11-25 07:55:55,358 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | pilot state: failed 
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | transexitcode: 65
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | exeerrorcode: 65
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | exitcode: 65
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | cpuconsumptiontime: 50 s
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | nevents: 0
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | neventsw: 0
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | pid: 3756263
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | pgrp: 3756263
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | corecount: 8
[2025-11-24 23:56:48] 2025-11-25 07:55:55,359 | INFO     | event service: False
[2025-11-24 23:56:48] 2025-11-25 07:55:55,360 | INFO     | sizes: {0: 2284302, 7: 2284564, 11: 2284592, 108: 2314272, 110: 2314272, 235: 2314438}
[2025-11-24 23:56:48] 2025-11-25 07:55:55,360 | INFO     | --------------------------------------------------
[2025-11-24 23:56:48] 2025-11-25 07:55:55,360 | INFO     | 
[2025-11-24 23:56:48] 2025-11-25 07:55:55,360 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 23:56:48] 2025-11-25 07:55:55,378 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,378 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,378 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,380 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:56:48] 2025-11-25 07:55:55,380 | INFO     | job 6896242938 has completed (purged errors)
[2025-11-24 23:56:48] 2025-11-25 07:55:55,380 | INFO     | overall cleanup function is called
[2025-11-24 23:56:48] 2025-11-25 07:55:56,389 | INFO     | --- collectZombieJob: --- 10, [3756263]
[2025-11-24 23:56:48] 2025-11-25 07:55:56,389 | INFO     | zombie collector waiting for pid 3756263
[2025-11-24 23:56:48] 2025-11-25 07:55:56,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:56:48] 2025-11-25 07:55:56,389 | INFO     | collected zombie processes
[2025-11-24 23:56:48] 2025-11-25 07:55:56,389 | INFO     | will attempt to kill all subprocesses of pid=3756263
[2025-11-24 23:56:48] 2025-11-25 07:55:56,717 | INFO     | process IDs to be killed: [3756263] (in reverse order)
[2025-11-24 23:56:48] 2025-11-25 07:55:56,774 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:56:48] 2025-11-25 07:55:56,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:56:48] 2025-11-25 07:55:56,781 | INFO     | did not find any defunct processes belonging to 3756263
[2025-11-24 23:56:48] 2025-11-25 07:55:56,787 | INFO     | did not find any defunct processes belonging to 3756263
[2025-11-24 23:56:48] 2025-11-25 07:55:56,788 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:56:48] 2025-11-25 07:55:56,790 | INFO     | ready for new job
[2025-11-24 23:56:48] 2025-11-25 07:55:56,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:56:48] 2025-11-25 07:55:56,792 | INFO     | ***************************************
[2025-11-24 23:56:48] 2025-11-25 07:55:56,792 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:56:48] 2025-11-25 07:55:56,792 | INFO     | ***************************************
[2025-11-24 23:56:48] 2025-11-25 07:55:56,792 | INFO     | 
[2025-11-24 23:56:48] 2025-11-25 07:55:56,794 | INFO     | architecture information:
[2025-11-24 23:56:48] 2025-11-25 07:55:56,819 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:56:48] 2025-11-25 07:55:56,947 | INFO     | cat /etc/os-release:
[2025-11-24 23:56:48] NAME="CentOS Linux"
[2025-11-24 23:56:48] VERSION="7 (Core)"
[2025-11-24 23:56:48] ID="centos"
[2025-11-24 23:56:48] ID_LIKE="rhel fedora"
[2025-11-24 23:56:48] VERSION_ID="7"
[2025-11-24 23:56:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:56:48] ANSI_COLOR="0;31"
[2025-11-24 23:56:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:56:48] HOME_URL="https://www.centos.org/"
[2025-11-24 23:56:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:56:48] 
[2025-11-24 23:56:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:56:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:56:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:56:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:56:48] 
[2025-11-24 23:56:48] 2025-11-25 07:55:56,947 | INFO     | ***************************************
[2025-11-24 23:56:48] 2025-11-25 07:55:57,451 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 23:56:48] 2025-11-25 07:55:57,562 | INFO     | sufficient remaining disk space (1028115136512 B)
[2025-11-24 23:56:48] 2025-11-25 07:55:57,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:56:48] 2025-11-25 07:55:57,563 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:56:48] 2025-11-25 07:55:57,563 | INFO     | update_server=False
[2025-11-24 23:56:48] 2025-11-25 07:55:57,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:56:48] 2025-11-25 07:55:57,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:56:48] 2025-11-25 07:55:57,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:56:48] 2025-11-25 07:55:57,576 | INFO     | aborting loop
[2025-11-24 23:56:48] 2025-11-25 07:55:57,748 | INFO     | all payload control threads have been joined
[2025-11-24 23:56:48] 2025-11-25 07:55:58,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:56:48] 2025-11-25 07:55:58,294 | INFO     | all data control threads have been joined
[2025-11-24 23:56:48] 2025-11-25 07:55:58,533 | INFO     | all job control threads have been joined
[2025-11-24 23:56:48] 2025-11-25 07:55:58,569 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:58,591 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:58,632 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:58,707 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:58,754 | INFO     | [payload] control thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:59,161 | INFO     | [job] validate thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:59,300 | INFO     | [data] control thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:59,404 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:59,509 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:59,539 | INFO     | [job] control thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:59,573 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:59,623 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:59,623 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:55:59,782 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:56:00,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:56:48] 2025-11-25 07:56:01,398 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:56:02,249 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:56:48] 2025-11-25 07:56:27,150 | INFO     | PID=3749720 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:56:48] 2025-11-25 07:56:27,150 | INFO     | .. there are 18 such processes running
[2025-11-24 23:56:48] 2025-11-25 07:56:27,150 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:56:48] 2025-11-25 07:56:27,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:56:48] 2025-11-25 07:56:27,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:56:48] 2025-11-25 07:56:41,851 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:56:48] 2025-11-25 07:56:42,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521409021760)>', '<ExcThread(monitor, started 140521020303104)>']
[2025-11-24 23:56:48] 2025-11-25 07:56:42,241 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:56:48] 2025-11-25 07:56:42,241 | INFO     | [monitor] control thread has ended
[2025-11-24 23:56:48] 2025-11-25 07:56:47,263 | INFO     | all workflow threads have been joined
[2025-11-24 23:56:48] 2025-11-25 07:56:47,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:56:48] 2025-11-25 07:56:47,263 | INFO     | traces error code: 0
[2025-11-24 23:56:48] 2025-11-25 07:56:47,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:56:48] 2025-11-25 07:56:47,896 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:56:48] 2025-11-25 07:56:47,900 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:56:48] 2025-11-25 07:56:47,902 [wrapper] pilotpid: 3749720
[2025-11-24 23:56:48] 2025-11-25 07:56:47,903 [wrapper] Pilot exit status: 0
[2025-11-24 23:56:48] 2025-11-25 07:56:47,916 [wrapper] pandaids: 6896242938
[2025-11-24 23:56:48] 2025-11-25 07:56:47,952 [wrapper] cleanup supervisor_pilot 3749726 3749721
[2025-11-24 23:56:48] 2025-11-25 07:56:47,955 [wrapper] Test setup, not cleaning
[2025-11-24 23:56:48] 2025-11-25 07:56:47,956 [wrapper] apfmon messages muted
[2025-11-24 23:56:48] 2025-11-25 07:56:47,958 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:56:48] 2025-11-25 07:56:47,960 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:56:48]  *** Error codes and diagnostics ***
[2025-11-24 23:56:48]     "exeErrorCode": 65,
[2025-11-24 23:56:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 23:56:48]     "pilotErrorCode": 1305,
[2025-11-24 23:56:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 23:56:48]  *** Listing of results directory ***
[2025-11-24 23:56:48] total 403420
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-24 23:56:48] -rwx------. 1 boinc boinc     36292 Nov 24 12:46 runpilot2-wrapper.sh
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc      5112 Nov 24 12:46 queuedata.json
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc       100 Nov 24 23:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:56:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 23:51 run_atlas
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc       105 Nov 24 23:51 job.xml
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc      6445 Nov 24 23:51 init_data.xml
[2025-11-24 23:56:48] -rw-r--r--. 2 boinc boinc 408886875 Nov 24 23:51 EVNT.47483658._004244.pool.root.1
[2025-11-24 23:56:48] drwxrwx--x. 2 boinc boinc      4096 Nov 24 23:51 shared
[2025-11-24 23:56:48] -rw-r--r--. 2 boinc boinc    590094 Nov 24 23:51 input.tar.gz
[2025-11-24 23:56:48] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:51 start_atlas.sh
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc         0 Nov 24 23:51 boinc_lockfile
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc      2783 Nov 24 23:51 pandaJob.out
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc    991830 Nov 24 23:51 agis_schedconf.cvmfs.json
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc   1516227 Nov 24 23:51 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:56:48] drwx------. 5 boinc boinc      4096 Nov 24 23:51 pilot3
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc       524 Nov 24 23:53 boinc_task_state.xml
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc       987 Nov 24 23:53 memory_monitor_summary.json
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc     48734 Nov 24 23:53 log.47556185._000074.job.log.tgz.1
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc        95 Nov 24 23:55 pilot_heartbeat.json
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc     10327 Nov 24 23:55 heartbeat.json
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc      4823 Nov 24 23:56 pilotlog.txt
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc     98609 Nov 24 23:56 log.47556185._000074.job.log.1
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc      8192 Nov 24 23:56 boinc_mmap_file
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc        23 Nov 24 23:56 wrapper_checkpoint.txt
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc       186 Nov 24 23:56 output.list
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc       620 Nov 24 23:56 runtime_log
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc    174080 Nov 24 23:56 result.tar.gz
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc       644 Nov 24 23:56 VtCODmKdsh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3uLKDmtvmi6m.diag
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc      8634 Nov 24 23:56 runtime_log.err
[2025-11-24 23:56:48] -rw-r--r--. 1 boinc boinc     21733 Nov 24 23:56 stderr.txt
[2025-11-24 23:56:48] No HITS result produced
[2025-11-24 23:56:48]  *** Contents of shared directory: ***
[2025-11-24 23:56:48] total 400076
[2025-11-24 23:56:48] -rw-r--r--. 2 boinc boinc 408886875 Nov 24 23:51 ATLAS.root_0
[2025-11-24 23:56:48] -rw-r--r--. 2 boinc boinc    590094 Nov 24 23:51 input.tar.gz
[2025-11-24 23:56:48] -rw-r--r--. 2 boinc boinc     15847 Nov 24 23:51 start_atlas.sh
[2025-11-24 23:56:48] -rw-------. 1 boinc boinc    174080 Nov 24 23:56 result.tar.gz
23:56:50 (3746066): run_atlas exited; CPU time 51.292059
23:56:50 (3746066): called boinc_finish(0)

</stderr_txt>
]]>

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