Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:02:59 (30386): wrapper (7.7.26015): starting
03:02:59 (30386): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 03:02:59] Arguments: --nthreads 8
[2025-11-25 03:02:59] Threads: 8
[2025-11-25 03:02:59] Checking for CVMFS
[2025-11-25 03:03:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:03:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:03:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:03:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:03:00] 2.11.2.0 21766 115993 140220 153275 1 82 16398447 18432000 1885 130560 0 84291932 99.974 4822003 27011 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 03:03:00] CVMFS is ok
[2025-11-25 03:03:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 03:03:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 03:03:00] Further information can be found at the LHC@home message board.
[2025-11-25 03:03:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:03:00] Checking for apptainer binary...
[2025-11-25 03:03:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:03:00] Running /usr/bin/apptainer --version
[2025-11-25 03:03:00] apptainer version 1.3.2-1.el7
[2025-11-25 03:03:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:03:01] c-206-18.aglt2.org
[2025-11-25 03:03:01] apptainer works
[2025-11-25 03:03:01] Set ATHENA_PROC_NUMBER=8
[2025-11-25 03:03:01] Set ATHENA_CORE_NUMBER=8
[2025-11-25 03:03:01] Starting ATLAS job with PandaID=6895475899
[2025-11-25 03:03:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:28:15]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:28:15] 2025-11-26 03:27:18,095 | INFO     | monitor loop #4998: job 0:6895475899 is in state 'finished'
[2025-11-25 22:28:15] 2025-11-26 03:27:18,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,407 | INFO     | time since job start (69846s) is within the limit (172800.0s)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,592 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 22:28:15] 2025-11-26 03:27:18,597 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2466.8333333333335
[2025-11-25 22:28:15] 2025-11-26 03:27:18,600 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895475899/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,601 | INFO     | extracted standard info from prmon json
[2025-11-25 22:28:15] 2025-11-26 03:27:18,601 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:28:15] 2025-11-26 03:27:18,601 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:28:15] 2025-11-26 03:27:18,617 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:28:15] 2025-11-26 03:27:18,618 | INFO     | sum of square deviations: 465471587759.37616
[2025-11-25 22:28:15] 2025-11-26 03:27:18,642 | INFO     | sum of deviations: 2244197334194.743
[2025-11-25 22:28:15] 2025-11-26 03:27:18,642 | INFO     | mean x: 1764092710.6139739
[2025-11-25 22:28:15] 2025-11-26 03:27:18,643 | INFO     | mean y: 2865046.5537117906
[2025-11-25 22:28:15] 2025-11-26 03:27:18,643 | INFO     | intersect: -8502427784.506978
[2025-11-25 22:28:15] 2025-11-26 03:27:18,644 | INFO     | chi2: 5.579607916256309
[2025-11-25 22:28:15] 2025-11-26 03:27:18,645 | INFO     | sum of square deviations: 459400488337.48346
[2025-11-25 22:28:15] 2025-11-26 03:27:18,671 | INFO     | sum of deviations: 2587999406660.933
[2025-11-25 22:28:15] 2025-11-26 03:27:18,671 | INFO     | mean x: 1764092558.1166666
[2025-11-25 22:28:15] 2025-11-26 03:27:18,671 | INFO     | mean y: 2873677.7824561405
[2025-11-25 22:28:15] 2025-11-26 03:27:18,671 | INFO     | intersect: -9935014090.301561
[2025-11-25 22:28:15] 2025-11-26 03:27:18,672 | INFO     | chi2: 2.925047538485528
[2025-11-25 22:28:15] 2025-11-26 03:27:18,672 | INFO     | current chi2=2.925047538485528 (change=47.57610960506135 %)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,673 | INFO     | sum of square deviations: 453382413165.57404
[2025-11-25 22:28:15] 2025-11-26 03:27:18,715 | INFO     | sum of deviations: 2715605823598.056
[2025-11-25 22:28:15] 2025-11-26 03:27:18,715 | INFO     | mean x: 1764092405.6193833
[2025-11-25 22:28:15] 2025-11-26 03:27:18,715 | INFO     | mean y: 2876909.3612334803
[2025-11-25 22:28:15] 2025-11-26 03:27:18,716 | INFO     | intersect: -10563434158.191349
[2025-11-25 22:28:15] 2025-11-26 03:27:18,717 | INFO     | chi2: 2.4395315324270146
[2025-11-25 22:28:15] 2025-11-26 03:27:18,717 | INFO     | current chi2=2.4395315324270146 (change=16.59856804617589 %)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,718 | INFO     | right removable region: 1134
[2025-11-25 22:28:15] 2025-11-26 03:27:18,719 | INFO     | sum of square deviations: 459400059507.48303
[2025-11-25 22:28:15] 2025-11-26 03:27:18,749 | INFO     | sum of deviations: 1943782853014.8503
[2025-11-25 22:28:15] 2025-11-26 03:27:18,749 | INFO     | mean x: 1764092863.1166666
[2025-11-25 22:28:15] 2025-11-26 03:27:18,749 | INFO     | mean y: 2872583.8131578946
[2025-11-25 22:28:15] 2025-11-26 03:27:18,749 | INFO     | intersect: -7461239332.341689
[2025-11-25 22:28:15] 2025-11-26 03:27:18,750 | INFO     | chi2: 3.5010975185798463
[2025-11-25 22:28:15] 2025-11-26 03:27:18,750 | INFO     | current chi2=3.5010975185798463 (change=37.251907819914685 %)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,751 | INFO     | sum of square deviations: 453381694464.04785
[2025-11-25 22:28:15] 2025-11-26 03:27:18,778 | INFO     | sum of deviations: 1866734415058.5242
[2025-11-25 22:28:15] 2025-11-26 03:27:18,778 | INFO     | mean x: 1764093015.6176212
[2025-11-25 22:28:15] 2025-11-26 03:27:18,778 | INFO     | mean y: 2874535.793832599
[2025-11-25 22:28:15] 2025-11-26 03:27:18,778 | INFO     | intersect: -7260526664.183206
[2025-11-25 22:28:15] 2025-11-26 03:27:18,779 | INFO     | chi2: 3.446597666562773
[2025-11-25 22:28:15] 2025-11-26 03:27:18,779 | INFO     | current chi2=3.446597666562773 (change=1.5566504996747426 %)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,780 | INFO     | left removable region: 20
[2025-11-25 22:28:15] 2025-11-26 03:27:18,781 | INFO     | sum of square deviations: 428679108806.9051
[2025-11-25 22:28:15] 2025-11-26 03:27:18,803 | INFO     | sum of deviations: 2208131416850.1865
[2025-11-25 22:28:15] 2025-11-26 03:27:18,803 | INFO     | mean x: 1764092985.123878
[2025-11-25 22:28:15] 2025-11-26 03:27:18,803 | INFO     | mean y: 2890052.7450628364
[2025-11-25 22:28:15] 2025-11-26 03:27:18,803 | INFO     | intersect: -9083974836.795637
[2025-11-25 22:28:15] 2025-11-26 03:27:18,804 | INFO     | chi2: 0.23414350225464617
[2025-11-25 22:28:15] 2025-11-26 03:27:18,805 | INFO     | current memory leak: 5.15 B/s (using 1114 data points, chi2=0.23)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,805 | INFO     | could have reported an average CPU frequency of 2624 MHz (42 samples)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,805 | INFO     | ..............................
[2025-11-25 22:28:15] 2025-11-26 03:27:18,806 | INFO     | . Timing measurements:
[2025-11-25 22:28:15] 2025-11-26 03:27:18,806 | INFO     | . get job = 0 s
[2025-11-25 22:28:15] 2025-11-26 03:27:18,806 | INFO     | . initial setup = 2 s
[2025-11-25 22:28:15] 2025-11-26 03:27:18,806 | INFO     | . payload setup = 5 s
[2025-11-25 22:28:15] 2025-11-26 03:27:18,806 | INFO     | . stage-in = 0 s
[2025-11-25 22:28:15] 2025-11-26 03:27:18,806 | INFO     | . payload execution = 69814 s
[2025-11-25 22:28:15] 2025-11-26 03:27:18,806 | INFO     | . stage-out = 3 s
[2025-11-25 22:28:15] 2025-11-26 03:27:18,806 | INFO     | . log creation = 0 s
[2025-11-25 22:28:15] 2025-11-26 03:27:18,806 | INFO     | ..............................
[2025-11-25 22:28:15] 2025-11-26 03:27:18,915 | INFO     | 
[2025-11-25 22:28:15] 2025-11-26 03:27:18,915 | INFO     | job summary report
[2025-11-25 22:28:15] 2025-11-26 03:27:18,915 | INFO     | --------------------------------------------------
[2025-11-25 22:28:15] 2025-11-26 03:27:18,916 | INFO     | PanDA job id: 6895475899
[2025-11-25 22:28:15] 2025-11-26 03:27:18,916 | INFO     | task id: 47556149
[2025-11-25 22:28:15] 2025-11-26 03:27:18,916 | INFO     | errors: (none)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,916 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:28:15] 2025-11-26 03:27:18,916 | INFO     | pilot state: finished 
[2025-11-25 22:28:15] 2025-11-26 03:27:18,916 | INFO     | transexitcode: 0
[2025-11-25 22:28:15] 2025-11-26 03:27:18,917 | INFO     | exeerrorcode: 0
[2025-11-25 22:28:15] 2025-11-26 03:27:18,917 | INFO     | exeerrordiag: 
[2025-11-25 22:28:15] 2025-11-26 03:27:18,917 | INFO     | exitcode: 0
[2025-11-25 22:28:15] 2025-11-26 03:27:18,917 | INFO     | exitmsg: OK
[2025-11-25 22:28:15] 2025-11-26 03:27:18,917 | INFO     | cpuconsumptiontime: 539190 s
[2025-11-25 22:28:15] 2025-11-26 03:27:18,917 | INFO     | nevents: 1000
[2025-11-25 22:28:15] 2025-11-26 03:27:18,918 | INFO     | neventsw: 0
[2025-11-25 22:28:15] 2025-11-26 03:27:18,918 | INFO     | pid: 8750
[2025-11-25 22:28:15] 2025-11-26 03:27:18,918 | INFO     | pgrp: 8750
[2025-11-25 22:28:15] 2025-11-26 03:27:18,918 | INFO     | corecount: 8
[2025-11-25 22:28:15] 2025-11-26 03:27:18,918 | INFO     | event service: False
[2025-11-25 22:28:15] 2025-11-26 03:27:18,918 | INFO     | sizes: {0: 2284304, 4: 2284566, 11: 2284594, 69822: 2341136, 69827: 2350191, 69831: 2350381}
[2025-11-25 22:28:15] 2025-11-26 03:27:18,919 | INFO     | --------------------------------------------------
[2025-11-25 22:28:15] 2025-11-26 03:27:18,919 | INFO     | 
[2025-11-25 22:28:15] 2025-11-26 03:27:18,919 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 22:28:15] 2025-11-26 03:27:18,933 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,933 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,933 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,933 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,933 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:28:15] 2025-11-26 03:27:18,937 | INFO     | job 6895475899 has completed (purged errors)
[2025-11-25 22:28:15] 2025-11-26 03:27:18,937 | INFO     | overall cleanup function is called
[2025-11-25 22:28:15] 2025-11-26 03:27:19,950 | INFO     | --- collectZombieJob: --- 10, [8750]
[2025-11-25 22:28:15] 2025-11-26 03:27:19,950 | INFO     | zombie collector waiting for pid 8750
[2025-11-25 22:28:15] 2025-11-26 03:27:19,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:28:15] 2025-11-26 03:27:19,951 | INFO     | collected zombie processes
[2025-11-25 22:28:15] 2025-11-26 03:27:19,951 | INFO     | will attempt to kill all subprocesses of pid=8750
[2025-11-25 22:28:15] 2025-11-26 03:27:20,097 | INFO     | process IDs to be killed: [8750] (in reverse order)
[2025-11-25 22:28:15] 2025-11-26 03:27:20,141 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:28:15] 2025-11-26 03:27:20,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:28:15] 2025-11-26 03:27:20,147 | INFO     | did not find any defunct processes belonging to 8750
[2025-11-25 22:28:15] 2025-11-26 03:27:20,151 | INFO     | did not find any defunct processes belonging to 8750
[2025-11-25 22:28:15] 2025-11-26 03:27:20,153 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:28:15] 2025-11-26 03:27:20,154 | INFO     | ready for new job
[2025-11-25 22:28:15] 2025-11-26 03:27:20,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:28:15] 2025-11-26 03:27:20,159 | INFO     | ***************************************
[2025-11-25 22:28:15] 2025-11-26 03:27:20,159 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:28:15] 2025-11-26 03:27:20,159 | INFO     | ***************************************
[2025-11-25 22:28:15] 2025-11-26 03:27:20,159 | INFO     | 
[2025-11-25 22:28:15] 2025-11-26 03:27:20,161 | INFO     | architecture information:
[2025-11-25 22:28:15] 2025-11-26 03:27:20,161 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:28:15] 2025-11-26 03:27:20,175 | INFO     | cat /etc/os-release:
[2025-11-25 22:28:15] NAME="CentOS Linux"
[2025-11-25 22:28:15] VERSION="7 (Core)"
[2025-11-25 22:28:15] ID="centos"
[2025-11-25 22:28:15] ID_LIKE="rhel fedora"
[2025-11-25 22:28:15] VERSION_ID="7"
[2025-11-25 22:28:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:28:15] ANSI_COLOR="0;31"
[2025-11-25 22:28:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:28:15] HOME_URL="https://www.centos.org/"
[2025-11-25 22:28:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:28:15] 
[2025-11-25 22:28:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:28:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:28:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:28:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:28:15] 
[2025-11-25 22:28:15] 2025-11-26 03:27:20,175 | INFO     | ***************************************
[2025-11-25 22:28:15] 2025-11-26 03:27:20,679 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 22:28:15] 2025-11-26 03:27:20,693 | INFO     | sufficient remaining disk space (26517438464 B)
[2025-11-25 22:28:15] 2025-11-26 03:27:20,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:28:15] 2025-11-26 03:27:20,693 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:28:15] 2025-11-26 03:27:20,694 | INFO     | update_server=False
[2025-11-25 22:28:15] 2025-11-26 03:27:20,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:28:15] 2025-11-26 03:27:20,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:28:15] 2025-11-26 03:27:20,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:28:15] 2025-11-26 03:27:20,862 | INFO     | all payload control threads have been joined
[2025-11-25 22:28:15] 2025-11-26 03:27:21,069 | INFO     | all job control threads have been joined
[2025-11-25 22:28:15] 2025-11-26 03:27:21,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:28:15] 2025-11-26 03:27:21,458 | INFO     | all data control threads have been joined
[2025-11-25 22:28:15] 2025-11-26 03:27:21,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:28:15] 2025-11-26 03:27:21,604 | INFO     | aborting loop
[2025-11-25 22:28:15] 2025-11-26 03:27:21,699 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:21,699 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:21,770 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:21,867 | INFO     | [payload] control thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,074 | INFO     | [job] control thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,125 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,410 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,446 | INFO     | [job] validate thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,463 | INFO     | [data] control thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,609 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,700 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,718 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:22,781 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:23,119 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:25,087 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:28:15] 2025-11-26 03:27:51,603 | INFO     | PID=1734 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 22:28:15] 2025-11-26 03:27:51,603 | INFO     | .. there are 3 such processes running
[2025-11-25 22:28:15] 2025-11-26 03:27:51,615 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:28:15] 2025-11-26 03:27:51,616 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:28:15] 2025-11-26 03:27:51,616 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:28:15] 2025-11-26 03:28:08,058 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:28:15] 2025-11-26 03:28:10,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140487544661824)>', '<ExcThread(monitor, started 140486954178304)>']
[2025-11-25 22:28:15] 2025-11-26 03:28:10,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:28:15] 2025-11-26 03:28:10,709 | INFO     | [monitor] control thread has ended
[2025-11-25 22:28:15] 2025-11-26 03:28:15,186 | INFO     | all workflow threads have been joined
[2025-11-25 22:28:15] 2025-11-26 03:28:15,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:28:15] 2025-11-26 03:28:15,186 | INFO     | traces error code: 0
[2025-11-25 22:28:15] 2025-11-26 03:28:15,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:28:15] 2025-11-26 03:28:15,314 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:28:15] 2025-11-26 03:28:15,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:28:15] 2025-11-26 03:28:15,320 [wrapper] pilotpid: 1734
[2025-11-25 22:28:15] 2025-11-26 03:28:15,322 [wrapper] Pilot exit status: 0
[2025-11-25 22:28:15] 2025-11-26 03:28:15,331 [wrapper] pandaids: 6895475899
[2025-11-25 22:28:15] 2025-11-26 03:28:15,371 [wrapper] cleanup supervisor_pilot  8408 1735
[2025-11-25 22:28:15] 2025-11-26 03:28:15,373 [wrapper] Test setup, not cleaning
[2025-11-25 22:28:15] 2025-11-26 03:28:15,375 [wrapper] apfmon messages muted
[2025-11-25 22:28:15] 2025-11-26 03:28:15,377 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:28:15] 2025-11-26 03:28:15,380 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:28:15]  *** Error codes and diagnostics ***
[2025-11-25 22:28:15]     "exeErrorCode": 0,
[2025-11-25 22:28:15]     "exeErrorDiag": "",
[2025-11-25 22:28:15]     "pilotErrorCode": 0,
[2025-11-25 22:28:15]     "pilotErrorDiag": "",
[2025-11-25 22:28:15]  *** Listing of results directory ***
[2025-11-25 22:28:15] total 1323768
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 04:01 queuedata.json
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 04:01 pilot3.tar.gz
[2025-11-25 22:28:15] -rwx------ 1 boincer umatlas     36292 Nov 24 04:05 runpilot2-wrapper.sh
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas       100 Nov 25 03:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:28:15] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 03:02 run_atlas
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas       105 Nov 25 03:02 job.xml
[2025-11-25 22:28:15] -rw-r--r-- 2 boincer umatlas 408158207 Nov 25 03:02 EVNT.47483658._001291.pool.root.1
[2025-11-25 22:28:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:02 start_atlas.sh
[2025-11-25 22:28:15] drwxrwx--x 2 boincer umatlas      4096 Nov 25 03:02 shared
[2025-11-25 22:28:15] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 03:02 input.tar.gz
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas         0 Nov 25 03:02 boinc_lockfile
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas      2783 Nov 25 03:03 pandaJob.out
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas        57 Nov 25 03:03 setup.sh.local
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas    991830 Nov 25 03:03 agis_schedconf.cvmfs.json
[2025-11-25 22:28:15] drwx------ 5 boincer umatlas      4096 Nov 25 03:03 pilot3
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas       533 Nov 25 22:16 boinc_task_state.xml
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 22:22 init_data.xml
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas 919474600 Nov 25 22:26 HITS.47556149._002771.pool.root.1
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas        95 Nov 25 22:26 pilot_heartbeat.json
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas      1068 Nov 25 22:27 memory_monitor_summary.json
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas   1516240 Nov 25 22:27 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas   2323477 Nov 25 22:27 log.47556149._002771.job.log.tgz.1
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas      8662 Nov 25 22:27 heartbeat.json
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 22:28 boinc_mmap_file
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas        29 Nov 25 22:28 wrapper_checkpoint.txt
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas      4820 Nov 25 22:28 pilotlog.txt
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas   9665553 Nov 25 22:28 log.47556149._002771.job.log.1
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas       353 Nov 25 22:28 output.list
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas       620 Nov 25 22:28 runtime_log
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas  12011520 Nov 25 22:28 result.tar.gz
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas       668 Nov 25 22:28 VuDLDmAhhh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbZLKDmkOPZqn.diag
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 22:28 runtime_log.err
[2025-11-25 22:28:15] -rw-r--r-- 1 boincer umatlas     21278 Nov 25 22:28 stderr.txt
[2025-11-25 22:28:15] HITS file was successfully produced:
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas 919474600 Nov 25 22:26 shared/HITS.pool.root.1
[2025-11-25 22:28:15]  *** Contents of shared directory: ***
[2025-11-25 22:28:15] total 1308856
[2025-11-25 22:28:15] -rw-r--r-- 2 boincer umatlas 408158207 Nov 25 03:02 ATLAS.root_0
[2025-11-25 22:28:15] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:02 start_atlas.sh
[2025-11-25 22:28:15] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 03:02 input.tar.gz
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas 919474600 Nov 25 22:26 HITS.pool.root.1
[2025-11-25 22:28:15] -rw------- 1 boincer umatlas  12011520 Nov 25 22:28 result.tar.gz
22:28:17 (30386): run_atlas exited; CPU time 538007.261042
22:28:17 (30386): called boinc_finish(0)

</stderr_txt>
]]>

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