Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:22:32 (3213597): wrapper (7.7.26015): starting
08:22:32 (3213597): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 08:22:32] Arguments: --nthreads 8
[2025-11-25 08:22:32] Threads: 8
[2025-11-25 08:22:32] Checking for CVMFS
[2025-11-25 08:22:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:22:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:22:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:22:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:22:33] 2.13.2.0 6491 35117 225908 153284 3 126 37787174 40960001 27798 16776704 0 146675490 99.582 147541510 40329 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 08:22:33] CVMFS is ok
[2025-11-25 08:22:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:22:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:22:33] Further information can be found at the LHC@home message board.
[2025-11-25 08:22:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:22:33] Checking for apptainer binary...
[2025-11-25 08:22:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:22:33] Running /usr/bin/apptainer --version
[2025-11-25 08:22:33] apptainer version 1.4.4-1.el9
[2025-11-25 08:22:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:22:33] c-212-20.aglt2.org
[2025-11-25 08:22:33] apptainer works
[2025-11-25 08:22:33] Set ATHENA_PROC_NUMBER=8
[2025-11-25 08:22:33] Set ATHENA_CORE_NUMBER=8
[2025-11-25 08:22:33] Starting ATLAS job with PandaID=6895357020
[2025-11-25 08:22:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:45:26]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:45:26] 2025-11-26 01:44:30,064 | INFO     | monitor loop #2848: job 0:6895357020 is in state 'finished'
[2025-11-25 20:45:26] 2025-11-26 01:44:30,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:45:26] 2025-11-26 01:44:31,442 | INFO     | time since job start (44488s) is within the limit (172800.0s)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,002 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 20:45:26] 2025-11-26 01:44:32,014 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3225.79240625
[2025-11-25 20:45:26] 2025-11-26 01:44:32,031 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895357020/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,032 | INFO     | extracted standard info from prmon json
[2025-11-25 20:45:26] 2025-11-26 01:44:32,032 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:45:26] 2025-11-26 01:44:32,032 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:45:26] 2025-11-26 01:44:32,042 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:45:26] 2025-11-26 01:44:32,043 | INFO     | sum of square deviations: 120128608862.9136
[2025-11-25 20:45:26] 2025-11-26 01:44:32,054 | INFO     | sum of deviations: 969262983662.7528
[2025-11-25 20:45:26] 2025-11-26 01:44:32,054 | INFO     | mean x: 1764099233.7201645
[2025-11-25 20:45:26] 2025-11-26 01:44:32,054 | INFO     | mean y: 2845887.7242798354
[2025-11-25 20:45:26] 2025-11-26 01:44:32,054 | INFO     | intersect: -14230866655.338888
[2025-11-25 20:45:26] 2025-11-26 01:44:32,055 | INFO     | chi2: 7.066459211600531
[2025-11-25 20:45:26] 2025-11-26 01:44:32,056 | INFO     | sum of square deviations: 117673820630.30257
[2025-11-25 20:45:26] 2025-11-26 01:44:32,066 | INFO     | sum of deviations: 1218236842671.4321
[2025-11-25 20:45:26] 2025-11-26 01:44:32,066 | INFO     | mean x: 1764099081.2251382
[2025-11-25 20:45:26] 2025-11-26 01:44:32,067 | INFO     | mean y: 2861353.690607735
[2025-11-25 20:45:26] 2025-11-26 01:44:32,067 | INFO     | intersect: -18260253444.146313
[2025-11-25 20:45:26] 2025-11-26 01:44:32,067 | INFO     | chi2: 3.7752354914042163
[2025-11-25 20:45:26] 2025-11-26 01:44:32,068 | INFO     | current chi2=3.7752354914042163 (change=46.57528787250811 %)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,068 | INFO     | sum of square deviations: 115252707447.6546
[2025-11-25 20:45:26] 2025-11-26 01:44:32,079 | INFO     | sum of deviations: 1265138594026.962
[2025-11-25 20:45:26] 2025-11-26 01:44:32,079 | INFO     | mean x: 1764098928.7301807
[2025-11-25 20:45:26] 2025-11-26 01:44:32,079 | INFO     | mean y: 2864293.4534075106
[2025-11-25 20:45:26] 2025-11-26 01:44:32,079 | INFO     | intersect: -19361796961.309925
[2025-11-25 20:45:26] 2025-11-26 01:44:32,080 | INFO     | chi2: 3.3994265107976784
[2025-11-25 20:45:26] 2025-11-26 01:44:32,080 | INFO     | current chi2=3.3994265107976784 (change=9.954583799135508 %)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,080 | INFO     | right removable region: 718
[2025-11-25 20:45:26] 2025-11-26 01:44:32,081 | INFO     | sum of square deviations: 117673500380.30257
[2025-11-25 20:45:26] 2025-11-26 01:44:32,091 | INFO     | sum of deviations: 718548086637.7556
[2025-11-25 20:45:26] 2025-11-26 01:44:32,092 | INFO     | mean x: 1764099386.2251382
[2025-11-25 20:45:26] 2025-11-26 01:44:32,092 | INFO     | mean y: 2861450.6947513814
[2025-11-25 20:45:26] 2025-11-26 01:44:32,092 | INFO     | intersect: -10769234514.108337
[2025-11-25 20:45:26] 2025-11-26 01:44:32,093 | INFO     | chi2: 3.9051065722084255
[2025-11-25 20:45:26] 2025-11-26 01:44:32,093 | INFO     | current chi2=3.9051065722084255 (change=44.737435605689555 %)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,093 | INFO     | sum of square deviations: 115252331320.36707
[2025-11-25 20:45:26] 2025-11-26 01:44:32,104 | INFO     | sum of deviations: 676417764107.1138
[2025-11-25 20:45:26] 2025-11-26 01:44:32,104 | INFO     | mean x: 1764099538.7218359
[2025-11-25 20:45:26] 2025-11-26 01:44:32,104 | INFO     | mean y: 2864103.6105702366
[2025-11-25 20:45:26] 2025-11-26 01:44:32,104 | INFO     | intersect: -10350664124.18454
[2025-11-25 20:45:26] 2025-11-26 01:44:32,105 | INFO     | chi2: 3.871595904523761
[2025-11-25 20:45:26] 2025-11-26 01:44:32,105 | INFO     | current chi2=3.871595904523761 (change=0.8581242807341251 %)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,105 | INFO     | left removable region: 20
[2025-11-25 20:45:26] 2025-11-26 01:44:32,106 | INFO     | sum of square deviations: 105446017514.23491
[2025-11-25 20:45:26] 2025-11-26 01:44:32,115 | INFO     | sum of deviations: 916512005447.2018
[2025-11-25 20:45:26] 2025-11-26 01:44:32,116 | INFO     | mean x: 1764099508.226361
[2025-11-25 20:45:26] 2025-11-26 01:44:32,116 | INFO     | mean y: 2886262.3151862463
[2025-11-25 20:45:26] 2025-11-26 01:44:32,116 | INFO     | intersect: -15330252116.995337
[2025-11-25 20:45:26] 2025-11-26 01:44:32,117 | INFO     | chi2: 0.1524690593318353
[2025-11-25 20:45:26] 2025-11-26 01:44:32,117 | INFO     | current memory leak: 8.69 B/s (using 698 data points, chi2=0.15)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | could have reported an average CPU frequency of 3186 MHz (28 samples)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | ..............................
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | . Timing measurements:
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | . get job = 0 s
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | . initial setup = 8 s
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | . payload setup = 15 s
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | . stage-in = 0 s
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | . payload execution = 44436 s
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | . stage-out = 3 s
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | . log creation = 0 s
[2025-11-25 20:45:26] 2025-11-26 01:44:32,118 | INFO     | ..............................
[2025-11-25 20:45:26] 2025-11-26 01:44:32,197 | INFO     | 
[2025-11-25 20:45:26] 2025-11-26 01:44:32,197 | INFO     | job summary report
[2025-11-25 20:45:26] 2025-11-26 01:44:32,197 | INFO     | --------------------------------------------------
[2025-11-25 20:45:26] 2025-11-26 01:44:32,197 | INFO     | PanDA job id: 6895357020
[2025-11-25 20:45:26] 2025-11-26 01:44:32,197 | INFO     | task id: 47556137
[2025-11-25 20:45:26] 2025-11-26 01:44:32,197 | INFO     | errors: (none)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,197 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | pilot state: finished 
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | transexitcode: 0
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | exeerrorcode: 0
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | exeerrordiag: 
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | exitcode: 0
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | exitmsg: OK
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | cpuconsumptiontime: 192680 s
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | nevents: 1000
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | neventsw: 0
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | pid: 3224842
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | pgrp: 3224842
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | corecount: 8
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | event service: False
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | sizes: {0: 2284093, 1: 2284292, 10: 2284554, 12: 2284582, 44455: 2330574, 44459: 2339568, 44462: 2339752, 44469: 2339998}
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | --------------------------------------------------
[2025-11-25 20:45:26] 2025-11-26 01:44:32,198 | INFO     | 
[2025-11-25 20:45:26] 2025-11-26 01:44:32,199 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 20:45:26] 2025-11-26 01:44:32,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,219 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,219 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,221 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,221 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:45:26] 2025-11-26 01:44:32,221 | INFO     | job 6895357020 has completed (purged errors)
[2025-11-25 20:45:26] 2025-11-26 01:44:32,221 | INFO     | overall cleanup function is called
[2025-11-25 20:45:26] 2025-11-26 01:44:33,242 | INFO     | --- collectZombieJob: --- 10, [3224842]
[2025-11-25 20:45:26] 2025-11-26 01:44:33,242 | INFO     | zombie collector waiting for pid 3224842
[2025-11-25 20:45:26] 2025-11-26 01:44:33,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:45:26] 2025-11-26 01:44:33,242 | INFO     | collected zombie processes
[2025-11-25 20:45:26] 2025-11-26 01:44:33,242 | INFO     | will attempt to kill all subprocesses of pid=3224842
[2025-11-25 20:45:26] 2025-11-26 01:44:33,671 | INFO     | process IDs to be killed: [3224842] (in reverse order)
[2025-11-25 20:45:26] 2025-11-26 01:44:33,834 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:45:26] 2025-11-26 01:44:33,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:45:26] 2025-11-26 01:44:33,854 | INFO     | did not find any defunct processes belonging to 3224842
[2025-11-25 20:45:26] 2025-11-26 01:44:33,872 | INFO     | did not find any defunct processes belonging to 3224842
[2025-11-25 20:45:26] 2025-11-26 01:44:33,874 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:45:26] 2025-11-26 01:44:33,874 | INFO     | ready for new job
[2025-11-25 20:45:26] 2025-11-26 01:44:33,874 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:45:26] 2025-11-26 01:44:33,877 | INFO     | ***************************************
[2025-11-25 20:45:26] 2025-11-26 01:44:33,877 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:45:26] 2025-11-26 01:44:33,877 | INFO     | ***************************************
[2025-11-25 20:45:26] 2025-11-26 01:44:33,877 | INFO     | 
[2025-11-25 20:45:26] 2025-11-26 01:44:33,882 | INFO     | architecture information:
[2025-11-25 20:45:26] 2025-11-26 01:44:33,883 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:45:26] 2025-11-26 01:44:33,897 | INFO     | cat /etc/os-release:
[2025-11-25 20:45:26] NAME="CentOS Linux"
[2025-11-25 20:45:26] VERSION="7 (Core)"
[2025-11-25 20:45:26] ID="centos"
[2025-11-25 20:45:26] ID_LIKE="rhel fedora"
[2025-11-25 20:45:26] VERSION_ID="7"
[2025-11-25 20:45:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:45:26] ANSI_COLOR="0;31"
[2025-11-25 20:45:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:45:26] HOME_URL="https://www.centos.org/"
[2025-11-25 20:45:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:45:26] 
[2025-11-25 20:45:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:45:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:45:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:45:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:45:26] 
[2025-11-25 20:45:26] 2025-11-26 01:44:33,897 | INFO     | ***************************************
[2025-11-25 20:45:26] 2025-11-26 01:44:34,403 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 20:45:26] 2025-11-26 01:44:34,436 | INFO     | sufficient remaining disk space (121544638464 B)
[2025-11-25 20:45:26] 2025-11-26 01:44:34,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:45:26] 2025-11-26 01:44:34,436 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:45:26] 2025-11-26 01:44:34,437 | INFO     | update_server=False
[2025-11-25 20:45:26] 2025-11-26 01:44:34,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:45:26] 2025-11-26 01:44:34,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:45:26] 2025-11-26 01:44:34,437 | INFO     | aborting loop
[2025-11-25 20:45:26] 2025-11-26 01:44:34,852 | INFO     | all payload control threads have been joined
[2025-11-25 20:45:26] 2025-11-26 01:44:34,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:45:26] 2025-11-26 01:44:34,951 | INFO     | all data control threads have been joined
[2025-11-25 20:45:26] 2025-11-26 01:44:35,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:45:26] 2025-11-26 01:44:35,441 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:35,442 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:35,451 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:35,455 | INFO     | all job control threads have been joined
[2025-11-25 20:45:26] 2025-11-26 01:44:35,573 | INFO     | [job] validate thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:35,765 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:35,857 | INFO     | [payload] control thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:35,956 | INFO     | [data] control thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:36,173 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:36,243 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:36,309 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:36,418 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:36,460 | INFO     | [job] control thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:36,889 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:36,938 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:37,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:45:26] 2025-11-26 01:44:38,217 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:44:39,118 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:45:26] 2025-11-26 01:45:04,974 | INFO     | PID=3218051 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 20:45:26] 2025-11-26 01:45:04,975 | INFO     | .. there are 31 such processes running
[2025-11-25 20:45:26] 2025-11-26 01:45:04,975 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:45:26] 2025-11-26 01:45:04,975 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:45:26] 2025-11-26 01:45:04,975 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:45:26] 2025-11-26 01:45:19,933 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:45:26] 2025-11-26 01:45:21,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947466651456)>', '<ExcThread(monitor, started 139947122083584)>']
[2025-11-25 20:45:26] 2025-11-26 01:45:22,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:45:26] 2025-11-26 01:45:22,070 | INFO     | [monitor] control thread has ended
[2025-11-25 20:45:26] 2025-11-26 01:45:26,103 | INFO     | all workflow threads have been joined
[2025-11-25 20:45:26] 2025-11-26 01:45:26,103 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:45:26] 2025-11-26 01:45:26,103 | INFO     | traces error code: 0
[2025-11-25 20:45:26] 2025-11-26 01:45:26,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:45:26] 2025-11-26 01:45:26,225 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:45:26] 2025-11-26 01:45:26,233 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:45:26] 2025-11-26 01:45:26,236 [wrapper] pilotpid: 3218051
[2025-11-25 20:45:26] 2025-11-26 01:45:26,238 [wrapper] Pilot exit status: 0
[2025-11-25 20:45:26] 2025-11-26 01:45:26,256 [wrapper] pandaids: 6895357020
[2025-11-25 20:45:26] 2025-11-26 01:45:26,350 [wrapper] cleanup supervisor_pilot 2227137 3218052
[2025-11-25 20:45:26] 2025-11-26 01:45:26,353 [wrapper] Test setup, not cleaning
[2025-11-25 20:45:26] 2025-11-26 01:45:26,356 [wrapper] apfmon messages muted
[2025-11-25 20:45:26] 2025-11-26 01:45:26,362 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:45:26] 2025-11-26 01:45:26,365 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:45:26]  *** Error codes and diagnostics ***
[2025-11-25 20:45:26]     "exeErrorCode": 0,
[2025-11-25 20:45:26]     "exeErrorDiag": "",
[2025-11-25 20:45:26]     "pilotErrorCode": 0,
[2025-11-25 20:45:26]     "pilotErrorDiag": "",
[2025-11-25 20:45:26]  *** Listing of results directory ***
[2025-11-25 20:45:26] total 1322220
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 06:44 pilot3.tar.gz
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 06:56 queuedata.json
[2025-11-25 20:45:26] -rwx------. 1 boincer umatlas     36292 Nov 23 06:59 runpilot2-wrapper.sh
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas       100 Nov 25 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:45:26] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 08:22 run_atlas
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas       105 Nov 25 08:22 job.xml
[2025-11-25 20:45:26] -rw-r--r--. 2 boincer umatlas 409355451 Nov 25 08:22 EVNT.47483658._000717.pool.root.1
[2025-11-25 20:45:26] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 08:22 shared
[2025-11-25 20:45:26] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 08:22 input.tar.gz
[2025-11-25 20:45:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 08:22 start_atlas.sh
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas         0 Nov 25 08:22 boinc_lockfile
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 08:22 pandaJob.out
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas        57 Nov 25 08:22 setup.sh.local
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas    991909 Nov 25 08:22 agis_schedconf.cvmfs.json
[2025-11-25 20:45:26] drwx------. 5 boincer umatlas      4096 Nov 25 08:23 pilot3
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas       532 Nov 25 20:35 boinc_task_state.xml
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas      6949 Nov 25 20:39 init_data.xml
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas 925101365 Nov 25 20:43 HITS.47556137._007125.pool.root.1
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas        95 Nov 25 20:44 pilot_heartbeat.json
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas      1075 Nov 25 20:44 memory_monitor_summary.json
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas   1516240 Nov 25 20:44 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas   1958101 Nov 25 20:44 log.47556137._007125.job.log.tgz.1
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas      8648 Nov 25 20:44 heartbeat.json
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 20:45 boinc_mmap_file
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas      4825 Nov 25 20:45 pilotlog.txt
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas        29 Nov 25 20:45 wrapper_checkpoint.txt
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas   5828840 Nov 25 20:45 log.47556137._007125.job.log.1
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas       353 Nov 25 20:45 output.list
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas       620 Nov 25 20:45 runtime_log
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas   7802880 Nov 25 20:45 result.tar.gz
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas      9343 Nov 25 20:45 runtime_log.err
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas       666 Nov 25 20:45 5bwLDmrvNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3rKKDmNHWiwm.diag
[2025-11-25 20:45:26] -rw-r--r--. 1 boincer umatlas     21347 Nov 25 20:45 stderr.txt
[2025-11-25 20:45:26] HITS file was successfully produced:
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas 925101365 Nov 25 20:43 shared/HITS.pool.root.1
[2025-11-25 20:45:26]  *** Contents of shared directory: ***
[2025-11-25 20:45:26] total 1311408
[2025-11-25 20:45:26] -rw-r--r--. 2 boincer umatlas 409355451 Nov 25 08:22 ATLAS.root_0
[2025-11-25 20:45:26] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 08:22 input.tar.gz
[2025-11-25 20:45:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 08:22 start_atlas.sh
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas 925101365 Nov 25 20:43 HITS.pool.root.1
[2025-11-25 20:45:26] -rw-------. 1 boincer umatlas   7802880 Nov 25 20:45 result.tar.gz
20:45:28 (3213597): run_atlas exited; CPU time 193237.263282
20:45:28 (3213597): called boinc_finish(0)

</stderr_txt>
]]>

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