Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 08:29:09 (26240): vboxwrapper version 26210
2025-11-25 08:29:09 (26240): BOINC client version: 8.2.4
2025-11-25 08:29:09 (26240): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-11-25 08:29:10 (26240): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 08:29:10 (26240): Create VM. (boinc_baa616ab52561f63, slot#16)
2025-11-25 08:29:10 (26240): Setting Memory Size for VM. (4300MB)
2025-11-25 08:29:11 (26240): Setting CPU Count for VM. (3)
2025-11-25 08:29:11 (26240): Setting Chipset Options for VM.
2025-11-25 08:29:11 (26240): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 08:29:12 (26240): Setting Boot Options for VM.
2025-11-25 08:29:12 (26240): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 08:29:12 (26240): Enabling VM Network Access.
2025-11-25 08:29:13 (26240): Disabling USB Support for VM.
2025-11-25 08:29:13 (26240): Disabling COM Port Support for VM.
2025-11-25 08:29:13 (26240): Disabling LPT Port Support for VM.
2025-11-25 08:29:13 (26240): Disabling Audio Support for VM.
2025-11-25 08:29:14 (26240): Disabling Clipboard Support for VM.
2025-11-25 08:29:14 (26240): Disabling Drag and Drop Support for VM.
2025-11-25 08:29:14 (26240): Adding storage controller(s) to VM.
2025-11-25 08:29:14 (26240): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 08:29:16 (26240): Adding VirtualBox Guest Additions to VM.
2025-11-25 08:29:17 (26240): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 08:29:17 (26240): forwarding host port 4375 to guest port 80
2025-11-25 08:29:17 (26240): Enabling remote desktop for VM.
2025-11-25 08:29:17 (26240): Required extension pack not installed, remote desktop not enabled.
2025-11-25 08:29:17 (26240): Enabling shared directory for VM.
2025-11-25 08:29:18 (26240): Starting VM using VBoxManage interface. (boinc_baa616ab52561f63, slot#16)
2025-11-25 08:29:24 (26240): Successfully started VM. (PID = '21548')
2025-11-25 08:29:24 (26240): Reporting VM Process ID to BOINC.
2025-11-25 08:29:24 (26240): Guest Log: BIOS: VirtualBox 7.0.22
2025-11-25 08:29:24 (26240): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 08:29:24 (26240): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 08:29:24 (26240): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 08:29:24 (26240): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 08:29:24 (26240): Detected: Web Application Enabled (http://localhost:4375)
2025-11-25 08:29:24 (26240): Preference change detected
2025-11-25 08:29:24 (26240): Setting CPU throttle for VM. (90%)
2025-11-25 08:29:24 (26240): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 08:29:26 (26240): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 08:29:26 (26240): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 08:29:29 (26240): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 08:29:29 (26240): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 08:29:29 (26240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 08:29:37 (26240): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 08:29:37 (26240): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-25 08:29:43 (26240): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 08:29:43 (26240): Guest Log: 00:00:00.000164 main     Log opened 2025-11-25T08:29:41.743136000Z
2025-11-25 08:29:43 (26240): Guest Log: 00:00:00.000269 main     OS Product: Linux
2025-11-25 08:29:43 (26240): Guest Log: 00:00:00.000316 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 08:29:43 (26240): Guest Log: 00:00:00.000349 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 08:29:43 (26240): Guest Log: 00:00:00.000376 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 08:29:43 (26240): Guest Log: 00:00:00.000377 main     Process ID: 1284
2025-11-25 08:29:43 (26240): Guest Log: 00:00:00.000377 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 08:29:43 (26240): Guest Log: 00:00:00.001026 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 08:29:43 (26240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 08:29:43 (26240): Guest Log: [INFO] Mounting shared directory
2025-11-25 08:29:43 (26240): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 08:29:48 (26240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 08:29:48 (26240): Guest Log: [INFO] Detected branch: prod
2025-11-25 08:29:48 (26240): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 08:29:48 (26240): Guest Log: Copying input files
2025-11-25 08:29:52 (26240): Guest Log: Copied input files into RunAtlas.
2025-11-25 08:29:52 (26240): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 08:29:52 (26240): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 08:29:52 (26240): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 08:29:52 (26240): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 08:30:01 (26240): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 08:30:01 (26240): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 08:30:01 (26240): Guest Log: 2.6.3.0 1559 0 32224 153276 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 08:30:02 (26240): Guest Log: copied the webapp to /var/www
2025-11-25 08:30:02 (26240): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-25 08:30:02 (26240): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-25 08:30:03 (26240): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 08:30:03 (26240): Guest Log:  *** Starting ATLAS job. (PandaID=6895351563 taskID=47556137) ***
2025-11-25 10:09:28 (26240): Status Report: Elapsed Time: '6000.000000'
2025-11-25 10:09:28 (26240): Status Report: CPU Time: '14867.078125'
2025-11-25 11:49:36 (26240): Status Report: Elapsed Time: '12000.000000'
2025-11-25 11:49:36 (26240): Status Report: CPU Time: '30570.062500'
2025-11-25 13:29:41 (26240): Status Report: Elapsed Time: '18000.000000'
2025-11-25 13:29:41 (26240): Status Report: CPU Time: '46145.984375'
2025-11-25 15:09:46 (26240): Status Report: Elapsed Time: '24000.000000'
2025-11-25 15:09:46 (26240): Status Report: CPU Time: '61844.968750'
2025-11-25 16:49:53 (26240): Status Report: Elapsed Time: '30000.000000'
2025-11-25 16:49:53 (26240): Status Report: CPU Time: '77459.500000'
2025-11-25 18:30:01 (26240): Status Report: Elapsed Time: '36000.000000'
2025-11-25 18:30:01 (26240): Status Report: CPU Time: '92719.859375'
2025-11-25 20:10:06 (26240): Status Report: Elapsed Time: '42000.000000'
2025-11-25 20:10:06 (26240): Status Report: CPU Time: '108296.375000'
2025-11-25 21:50:13 (26240): Status Report: Elapsed Time: '48000.000000'
2025-11-25 21:50:13 (26240): Status Report: CPU Time: '123689.640625'
2025-11-25 23:30:19 (26240): Status Report: Elapsed Time: '54000.000000'
2025-11-25 23:30:19 (26240): Status Report: CPU Time: '139197.093750'
2025-11-26 01:10:25 (26240): Status Report: Elapsed Time: '60000.000000'
2025-11-26 01:10:25 (26240): Status Report: CPU Time: '154866.687500'
2025-11-26 02:50:31 (26240): Status Report: Elapsed Time: '66000.000000'
2025-11-26 02:50:31 (26240): Status Report: CPU Time: '170529.359375'
2025-11-26 04:30:36 (26240): Status Report: Elapsed Time: '72000.000000'
2025-11-26 04:30:36 (26240): Status Report: CPU Time: '186248.000000'
2025-11-26 05:46:23 (26240): Guest Log:  *** Job finished ***
2025-11-26 05:46:23 (26240): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:45:57,120 | INFO     | [payload] failed_post thread has finished
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:45:59,461 | INFO     | [data] queue_monitor thread has finished
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:16,945 | INFO     | [monitor] cgroup control has ended
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:17,315 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140128315737920)>', '<ExcThread(monitor, started 140127586211584)>']
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:17,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:17,589 | INFO     | [monitor] control thread has ended
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,321 | INFO     | all workflow threads have been joined
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,322 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,322 | INFO     | traces error code: 0
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,448 [wrapper] ==== pilot stdout END ====
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,454 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,458 [wrapper] pilotpid: 5945
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,464 [wrapper] Pilot exit status: 0
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,485 [wrapper] pandaids: 6895351563
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,540 [wrapper] cleanup supervisor_pilot 17567 5946
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,547 [wrapper] Test setup, not cleaning
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,553 [wrapper] apfmon messages muted
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,558 [wrapper] ==== wrapper stdout END ====
2025-11-26 05:46:23 (26240): Guest Log: 2025-11-26 05:46:22,563 [wrapper] ==== wrapper stderr END ====
2025-11-26 05:46:23 (26240): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 05:46:23 (26240): Guest Log:     "exeErrorCode": 0,
2025-11-26 05:46:23 (26240): Guest Log:     "exeErrorDiag": "",
2025-11-26 05:46:23 (26240): Guest Log:     "pilotErrorCode": 0,
2025-11-26 05:46:23 (26240): Guest Log:     "pilotErrorDiag": "",
2025-11-26 05:46:23 (26240): Guest Log:  *** Listing of results directory ***
2025-11-26 05:46:23 (26240): Guest Log: total 933832
2025-11-26 05:46:23 (26240): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 23 00:28 pilot3.tar.gz
2025-11-26 05:46:23 (26240): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 23 00:58 queuedata.json
2025-11-26 05:46:23 (26240): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 23 00:59 runpilot2-wrapper.sh
2025-11-26 05:46:23 (26240): Guest Log: -rwxr-xr-x. 1 atlas atlas      8480 Nov 25 08:29 init_data.xml
2025-11-26 05:46:23 (26240): Guest Log: -rwxr-xr-x. 1 atlas atlas    590102 Nov 25 08:29 input.tar.gz
2025-11-26 05:46:23 (26240): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 25 08:29 start_atlas.sh
2025-11-26 05:46:23 (26240): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 25 08:29 EVNT.47483658._000556.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 05:46:23 (26240): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 25 08:30 pandaJob.out
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas    991858 Nov 25 08:30 agis_schedconf.cvmfs.json
2025-11-26 05:46:23 (26240): Guest Log: drwx------. 5 atlas atlas      4096 Nov 25 08:30 pilot3
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas 928533564 Nov 26 05:45 HITS.47556137._005518.pool.root.1
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas      1030 Nov 26 05:45 memory_monitor_summary.json
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 05:45 agis_ddmendpoints.agis.ALL.json
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas   1761725 Nov 26 05:45 log.47556137._005518.job.log.tgz.1
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas      8627 Nov 26 05:45 heartbeat.json
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 05:45 pilot_heartbeat.json
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 26 05:46 pilotlog.txt
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas  10170062 Nov 26 05:46 log.47556137._005518.job.log.1
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 05:46 output.list
2025-11-26 05:46:23 (26240): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 05:46 runtime_log
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas  11950080 Nov 26 05:46 result.tar.gz
2025-11-26 05:46:23 (26240): Guest Log: -rw-r--r--. 1 atlas atlas      8783 Nov 26 05:46 runtime_log.err
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas       675 Nov 26 05:46 dZ7NDmUdDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfUKKDmrO7dYn.diag
2025-11-26 05:46:23 (26240): Guest Log: Looking for outputfile HITS.47556137._005518.pool.root.1
2025-11-26 05:46:23 (26240): Guest Log: HITS file was successfully produced
2025-11-26 05:46:23 (26240): Guest Log: -rw-------. 1 atlas atlas 928533564 Nov 26 05:45 /home/atlas/RunAtlas/HITS.47556137._005518.pool.root.1
2025-11-26 05:46:35 (26240): Guest Log: Successfully finished the ATLAS job!
2025-11-26 05:46:35 (26240): Guest Log: Copying the results back to the shared directory!
2025-11-26 05:46:35 (26240): Guest Log:  *** Contents of shared directory: ***
2025-11-26 05:46:35 (26240): Guest Log: total 1318704
2025-11-26 05:46:35 (26240): Guest Log: -rwxrwxrwx. 1 root root 409242576 Nov 25 08:29 ATLAS.root_0
2025-11-26 05:46:35 (26240): Guest Log: -rwxrwxrwx. 1 root root 928533564 Nov 26 05:46 HITS.pool.root.1
2025-11-26 05:46:35 (26240): Guest Log: -rwxrwxrwx. 1 root root      8480 Nov 25 08:29 init_data.xml
2025-11-26 05:46:35 (26240): Guest Log: -rwxrwxrwx. 1 root root    590102 Nov 25 08:28 input.tar.gz
2025-11-26 05:46:35 (26240): Guest Log: -rwxrwxrwx. 1 root root  11950080 Nov 26 05:46 result.tar.gz
2025-11-26 05:46:35 (26240): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 25 08:28 start_atlas.sh
2025-11-26 05:46:35 (26240): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 05:46:35 (26240): VM Completion File Detected.
2025-11-26 05:46:35 (26240): Powering off VM.
2025-11-26 05:46:37 (26240): Successfully stopped VM.
2025-11-26 05:46:37 (26240): Deregistering VM. (boinc_baa616ab52561f63, slot#16)
2025-11-26 05:46:37 (26240): Removing network bandwidth throttle group from VM.
2025-11-26 05:46:37 (26240): Removing VM from VirtualBox.
2025-11-26 05:46:43 (26240): called boinc_finish(0)

</stderr_txt>
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