Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
09:10:55 (1692253): wrapper (7.7.26015): starting
09:10:55 (1692253): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 09:10:55] Arguments: --nthreads 12
[2025-11-25 09:10:55] Threads: 12
[2025-11-25 09:10:55] Checking for CVMFS
[2025-11-25 09:10:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 09:10:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 09:10:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 09:10:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 09:10:56] 2.13.2.0 1643598 228 43728 153275 0 81 3561053 4096001 0 130560 0 130646 99.982 9221 537 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-25 09:10:56] CVMFS is ok
[2025-11-25 09:10:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 09:10:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 09:10:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 09:10:56] Further information can be found at the LHC@home message board.
[2025-11-25 09:10:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 09:10:56] Checking for apptainer binary...
[2025-11-25 09:10:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 09:10:56] Running /usr/bin/apptainer --version
[2025-11-25 09:10:56] apptainer version 1.4.3
[2025-11-25 09:10:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 09:10:56] tito-MS-7C02
[2025-11-25 09:10:56] apptainer works
[2025-11-25 09:10:56] Set ATHENA_PROC_NUMBER=12
[2025-11-25 09:10:56] Set ATHENA_CORE_NUMBER=12
[2025-11-25 09:10:56] Starting ATLAS job with PandaID=6895351403
[2025-11-25 09:10:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 12:57:36]  *** The last 200 lines of the pilot log: ***
[2025-11-25 12:57:36] 2025-11-25 11:57:02,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 12:57:36] 2025-11-25 11:57:02,971 | INFO     | time since job start (13560s) is within the limit (172800.0s)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,289 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 12:57:36] 2025-11-25 11:57:03,292 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3541.317083333333
[2025-11-25 12:57:36] 2025-11-25 11:57:03,295 | INFO     | using path: /var/lib/boinc-client/slots/23/PanDA_Pilot-6895351403/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,296 | INFO     | extracted standard info from prmon json
[2025-11-25 12:57:36] 2025-11-25 11:57:03,296 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 12:57:36] 2025-11-25 11:57:03,296 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 12:57:36] 2025-11-25 11:57:03,299 | INFO     | fitting pss+swap vs Time
[2025-11-25 12:57:36] 2025-11-25 11:57:03,299 | INFO     | sum of square deviations: 3392590662.1846933
[2025-11-25 12:57:36] 2025-11-25 11:57:03,300 | INFO     | sum of deviations: 107694000484.31522
[2025-11-25 12:57:36] 2025-11-25 11:57:03,300 | INFO     | mean x: 1764065024.1126127
[2025-11-25 12:57:36] 2025-11-25 11:57:03,300 | INFO     | mean y: 3455338.3873873875
[2025-11-25 12:57:36] 2025-11-25 11:57:03,300 | INFO     | intersect: -55994818098.70573
[2025-11-25 12:57:36] 2025-11-25 11:57:03,300 | INFO     | chi2: 3.9555531979087477
[2025-11-25 12:57:36] 2025-11-25 11:57:03,301 | INFO     | sum of square deviations: 3168525612.76499
[2025-11-25 12:57:36] 2025-11-25 11:57:03,302 | INFO     | sum of deviations: 173953769994.46545
[2025-11-25 12:57:36] 2025-11-25 11:57:03,302 | INFO     | mean x: 1764064871.626728
[2025-11-25 12:57:36] 2025-11-25 11:57:03,302 | INFO     | mean y: 3500247.0921658985
[2025-11-25 12:57:36] 2025-11-25 11:57:03,302 | INFO     | intersect: -96844615386.88184
[2025-11-25 12:57:36] 2025-11-25 11:57:03,302 | INFO     | chi2: 1.9129421809659122
[2025-11-25 12:57:36] 2025-11-25 11:57:03,302 | INFO     | current chi2=1.9129421809659122 (change=51.63907334182078 %)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,302 | INFO     | sum of square deviations: 2954501072.811308
[2025-11-25 12:57:36] 2025-11-25 11:57:03,303 | INFO     | sum of deviations: 170922569363.94336
[2025-11-25 12:57:36] 2025-11-25 11:57:03,303 | INFO     | mean x: 1764064719.1226416
[2025-11-25 12:57:36] 2025-11-25 11:57:03,303 | INFO     | mean y: 3498026.886792453
[2025-11-25 12:57:36] 2025-11-25 11:57:03,303 | INFO     | intersect: -102050441669.20541
[2025-11-25 12:57:36] 2025-11-25 11:57:03,304 | INFO     | chi2: 1.8691815006824988
[2025-11-25 12:57:36] 2025-11-25 11:57:03,304 | INFO     | current chi2=1.8691815006824988 (change=2.287611236703301 %)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,304 | INFO     | right removable region: 211
[2025-11-25 12:57:36] 2025-11-25 11:57:03,304 | INFO     | sum of square deviations: 3168442652.76499
[2025-11-25 12:57:36] 2025-11-25 11:57:03,305 | INFO     | sum of deviations: 46850814752.88937
[2025-11-25 12:57:36] 2025-11-25 11:57:03,305 | INFO     | mean x: 1764065176.626728
[2025-11-25 12:57:36] 2025-11-25 11:57:03,305 | INFO     | mean y: 3496428.2949308758
[2025-11-25 12:57:36] 2025-11-25 11:57:03,305 | INFO     | intersect: -26081208223.069984
[2025-11-25 12:57:36] 2025-11-25 11:57:03,305 | INFO     | chi2: 2.1843744981699076
[2025-11-25 12:57:36] 2025-11-25 11:57:03,305 | INFO     | current chi2=2.1843744981699076 (change=44.77701628877702 %)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,306 | INFO     | sum of square deviations: 2954454042.051891
[2025-11-25 12:57:36] 2025-11-25 11:57:03,307 | INFO     | sum of deviations: 32239943685.608482
[2025-11-25 12:57:36] 2025-11-25 11:57:03,307 | INFO     | mean x: 1764065329.1179245
[2025-11-25 12:57:36] 2025-11-25 11:57:03,307 | INFO     | mean y: 3506827.6556603773
[2025-11-25 12:57:36] 2025-11-25 11:57:03,307 | INFO     | intersect: -19246536009.02265
[2025-11-25 12:57:36] 2025-11-25 11:57:03,307 | INFO     | chi2: 2.1455067172108415
[2025-11-25 12:57:36] 2025-11-25 11:57:03,307 | INFO     | current chi2=2.1455067172108415 (change=1.7793551880243021 %)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,307 | INFO     | left removable region: 20
[2025-11-25 12:57:36] 2025-11-25 11:57:03,307 | INFO     | sum of square deviations: 2160626633.3298426
[2025-11-25 12:57:36] 2025-11-25 11:57:03,308 | INFO     | sum of deviations: 72969846808.9738
[2025-11-25 12:57:36] 2025-11-25 11:57:03,308 | INFO     | mean x: 1764065298.6125655
[2025-11-25 12:57:36] 2025-11-25 11:57:03,308 | INFO     | mean y: 3572005.0942408377
[2025-11-25 12:57:36] 2025-11-25 11:57:03,308 | INFO     | intersect: -59573391740.09649
[2025-11-25 12:57:36] 2025-11-25 11:57:03,308 | INFO     | chi2: 0.017390069950548585
[2025-11-25 12:57:36] 2025-11-25 11:57:03,308 | INFO     | current memory leak: 33.77 B/s (using 191 data points, chi2=0.02)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | could have reported an average CPU frequency of 3552 MHz (11 samples)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | ..............................
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | . Timing measurements:
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | . get job = 0 s
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | . initial setup = 1 s
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | . payload setup = 3 s
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | . stage-in = 0 s
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | . payload execution = 13534 s
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | . stage-out = 1 s
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | . log creation = 0 s
[2025-11-25 12:57:36] 2025-11-25 11:57:03,309 | INFO     | ..............................
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | 
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | job summary report
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | --------------------------------------------------
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | PanDA job id: 6895351403
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | task id: 47556137
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | errors: (none)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | pilot state: finished 
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | transexitcode: 0
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | exeerrorcode: 0
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | exeerrordiag: 
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | exitcode: 0
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | exitmsg: OK
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | cpuconsumptiontime: 157740 s
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | nevents: 1000
[2025-11-25 12:57:36] 2025-11-25 11:57:03,369 | INFO     | neventsw: 0
[2025-11-25 12:57:36] 2025-11-25 11:57:03,370 | INFO     | pid: 1702645
[2025-11-25 12:57:36] 2025-11-25 11:57:03,370 | INFO     | pgrp: 1702645
[2025-11-25 12:57:36] 2025-11-25 11:57:03,370 | INFO     | corecount: 12
[2025-11-25 12:57:36] 2025-11-25 11:57:03,370 | INFO     | event service: False
[2025-11-25 12:57:36] 2025-11-25 11:57:03,370 | INFO     | sizes: {0: 2284266, 3: 2284528, 11: 2284556, 13542: 2315961, 13544: 2325032, 13547: 2325222}
[2025-11-25 12:57:36] 2025-11-25 11:57:03,370 | INFO     | --------------------------------------------------
[2025-11-25 12:57:36] 2025-11-25 11:57:03,370 | INFO     | 
[2025-11-25 12:57:36] 2025-11-25 11:57:03,370 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/23
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,386 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,386 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,386 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 12:57:36] 2025-11-25 11:57:03,386 | INFO     | job 6895351403 has completed (purged errors)
[2025-11-25 12:57:36] 2025-11-25 11:57:03,386 | INFO     | overall cleanup function is called
[2025-11-25 12:57:36] 2025-11-25 11:57:04,400 | INFO     | --- collectZombieJob: --- 10, [1702645]
[2025-11-25 12:57:36] 2025-11-25 11:57:04,400 | INFO     | zombie collector waiting for pid 1702645
[2025-11-25 12:57:36] 2025-11-25 11:57:04,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 12:57:36] 2025-11-25 11:57:04,400 | INFO     | collected zombie processes
[2025-11-25 12:57:36] 2025-11-25 11:57:04,400 | INFO     | will attempt to kill all subprocesses of pid=1702645
[2025-11-25 12:57:36] 2025-11-25 11:57:04,468 | INFO     | process IDs to be killed: [1702645] (in reverse order)
[2025-11-25 12:57:36] 2025-11-25 11:57:04,500 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 12:57:36] 2025-11-25 11:57:04,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 12:57:36] 2025-11-25 11:57:04,502 | INFO     | did not find any defunct processes belonging to 1702645
[2025-11-25 12:57:36] 2025-11-25 11:57:04,504 | INFO     | did not find any defunct processes belonging to 1702645
[2025-11-25 12:57:36] 2025-11-25 11:57:04,505 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 12:57:36] 2025-11-25 11:57:04,505 | INFO     | ready for new job
[2025-11-25 12:57:36] 2025-11-25 11:57:04,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 12:57:36] 2025-11-25 11:57:04,506 | INFO     | ***************************************
[2025-11-25 12:57:36] 2025-11-25 11:57:04,506 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 12:57:36] 2025-11-25 11:57:04,506 | INFO     | ***************************************
[2025-11-25 12:57:36] 2025-11-25 11:57:04,506 | INFO     | 
[2025-11-25 12:57:36] 2025-11-25 11:57:04,507 | INFO     | architecture information:
[2025-11-25 12:57:36] 2025-11-25 11:57:04,507 | INFO     | executing command: cat /etc/os-release
[2025-11-25 12:57:36] 2025-11-25 11:57:04,516 | INFO     | cat /etc/os-release:
[2025-11-25 12:57:36] NAME="CentOS Linux"
[2025-11-25 12:57:36] VERSION="7 (Core)"
[2025-11-25 12:57:36] ID="centos"
[2025-11-25 12:57:36] ID_LIKE="rhel fedora"
[2025-11-25 12:57:36] VERSION_ID="7"
[2025-11-25 12:57:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 12:57:36] ANSI_COLOR="0;31"
[2025-11-25 12:57:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 12:57:36] HOME_URL="https://www.centos.org/"
[2025-11-25 12:57:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 12:57:36] 
[2025-11-25 12:57:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 12:57:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 12:57:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 12:57:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 12:57:36] 
[2025-11-25 12:57:36] 2025-11-25 11:57:04,516 | INFO     | ***************************************
[2025-11-25 12:57:36] 2025-11-25 11:57:05,019 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/23
[2025-11-25 12:57:36] 2025-11-25 11:57:05,031 | INFO     | sufficient remaining disk space (189075030016 B)
[2025-11-25 12:57:36] 2025-11-25 11:57:05,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 12:57:36] 2025-11-25 11:57:05,031 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 12:57:36] 2025-11-25 11:57:05,031 | INFO     | update_server=False
[2025-11-25 12:57:36] 2025-11-25 11:57:05,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 12:57:36] 2025-11-25 11:57:05,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:57:36] 2025-11-25 11:57:05,157 | INFO     | all job control threads have been joined
[2025-11-25 12:57:36] 2025-11-25 11:57:05,367 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 12:57:36] 2025-11-25 11:57:05,367 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 12:57:36] 2025-11-25 11:57:05,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 12:57:36] 2025-11-25 11:57:05,367 | INFO     | will abort loop
[2025-11-25 12:57:36] 2025-11-25 11:57:05,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 12:57:36] 2025-11-25 11:57:05,842 | INFO     | all data control threads have been joined
[2025-11-25 12:57:36] 2025-11-25 11:57:06,009 | INFO     | all payload control threads have been joined
[2025-11-25 12:57:36] 2025-11-25 11:57:06,036 | INFO     | [job] queue monitor thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:06,036 | INFO     | [job] retrieve thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:06,162 | INFO     | [job] control thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:06,306 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 12:57:36] 2025-11-25 11:57:06,372 | INFO     | [job] job monitor thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:06,382 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:06,523 | INFO     | [data] copytool_in thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:06,845 | INFO     | [data] control thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:06,888 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:06,931 | INFO     | [payload] validate_post thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:06,958 | INFO     | [job] validate thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:07,011 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:07,014 | INFO     | [payload] control thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:07,121 | INFO     | [payload] failed_post thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:07,211 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:07,770 | INFO     | [data] copytool_out thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:10,311 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 12:57:36] 2025-11-25 11:57:24,289 | INFO     | [monitor] cgroup control has ended
[2025-11-25 12:57:36] 2025-11-25 11:57:24,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139268701161280)>', '<ExcThread(monitor, started 139268307552000)>']
[2025-11-25 12:57:36] 2025-11-25 11:57:29,840 | INFO     | all workflow threads have been joined
[2025-11-25 12:57:36] 2025-11-25 11:57:29,841 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 12:57:36] 2025-11-25 11:57:29,841 | INFO     | traces error code: 0
[2025-11-25 12:57:36] 2025-11-25 11:57:29,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 12:57:36] 2025-11-25 11:57:36,087 | INFO     | PID=1696065 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 12:57:36] 2025-11-25 11:57:36,088 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 12:57:36] 2025-11-25 11:57:36,088 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 12:57:36] 2025-11-25 11:57:36,088 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 12:57:36] 2025-11-25 11:57:36,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 12:57:36] 2025-11-25 11:57:36,088 | INFO     | [monitor] control thread has ended
[2025-11-25 12:57:36] 2025-11-25 11:57:36,146 [wrapper] ==== pilot stdout END ====
[2025-11-25 12:57:36] 2025-11-25 11:57:36,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 12:57:36] 2025-11-25 11:57:36,150 [wrapper] pilotpid: 1696065
[2025-11-25 12:57:36] 2025-11-25 11:57:36,152 [wrapper] Pilot exit status: 0
[2025-11-25 12:57:36] 2025-11-25 11:57:36,158 [wrapper] pandaids: 6895351403
[2025-11-25 12:57:36] 2025-11-25 11:57:36,184 [wrapper] cleanup supervisor_pilot 1738113 1696066
[2025-11-25 12:57:36] 2025-11-25 11:57:36,186 [wrapper] Test setup, not cleaning
[2025-11-25 12:57:36] 2025-11-25 11:57:36,188 [wrapper] apfmon messages muted
[2025-11-25 12:57:36] 2025-11-25 11:57:36,191 [wrapper] ==== wrapper stdout END ====
[2025-11-25 12:57:36] 2025-11-25 11:57:36,192 [wrapper] ==== wrapper stderr END ====
[2025-11-25 12:57:36]  *** Error codes and diagnostics ***
[2025-11-25 12:57:36]     "exeErrorCode": 0,
[2025-11-25 12:57:36]     "exeErrorDiag": "",
[2025-11-25 12:57:36]     "pilotErrorCode": 0,
[2025-11-25 12:57:36]     "pilotErrorDiag": "",
[2025-11-25 12:57:36]  *** Listing of results directory ***
[2025-11-25 12:57:36] razem 1305288
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc      5112 lis 23 01:28 queuedata.json
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc    576529 lis 23 01:28 pilot3.tar.gz
[2025-11-25 12:57:36] -rwx------ 1 boinc boinc     36292 lis 23 01:28 runpilot2-wrapper.sh
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc       100 lis 25 09:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 12:57:36] -rwxr-xr-x 1 boinc boinc      7986 lis 25 09:10 run_atlas
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc       105 lis 25 09:10 job.xml
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc      9549 lis 25 09:10 init_data.xml
[2025-11-25 12:57:36] -rw-r--r-- 2 boinc boinc 409102730 lis 25 09:10 EVNT.47483658._000550.pool.root.1
[2025-11-25 12:57:36] -rw-r--r-- 2 boinc boinc     15847 lis 25 09:10 start_atlas.sh
[2025-11-25 12:57:36] drwxrwx--x 2 boinc boinc      4096 lis 25 09:10 shared
[2025-11-25 12:57:36] -rw-r--r-- 2 boinc boinc    590097 lis 25 09:10 input.tar.gz
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc         0 lis 25 09:10 boinc_lockfile
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc      2784 lis 25 09:10 pandaJob.out
[2025-11-25 12:57:36] -rw------- 1 boinc boinc    991830 lis 25 09:11 agis_schedconf.cvmfs.json
[2025-11-25 12:57:36] drwx------ 5 boinc boinc      4096 lis 25 09:11 pilot3
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc       532 lis 25 12:50 boinc_task_state.xml
[2025-11-25 12:57:36] -rw------- 1 boinc boinc 915740362 lis 25 12:56 HITS.47556137._005452.pool.root.1
[2025-11-25 12:57:36] -rw------- 1 boinc boinc      1037 lis 25 12:56 memory_monitor_summary.json
[2025-11-25 12:57:36] -rw------- 1 boinc boinc        95 lis 25 12:56 pilot_heartbeat.json
[2025-11-25 12:57:36] -rw------- 1 boinc boinc   1516240 lis 25 12:56 agis_ddmendpoints.agis.ALL.json
[2025-11-25 12:57:36] -rw------- 1 boinc boinc   1963163 lis 25 12:57 log.47556137._005452.job.log.tgz.1
[2025-11-25 12:57:36] -rw------- 1 boinc boinc      8564 lis 25 12:57 heartbeat.json
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc      8192 lis 25 12:57 boinc_mmap_file
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc        29 lis 25 12:57 wrapper_checkpoint.txt
[2025-11-25 12:57:36] -rw------- 1 boinc boinc       747 lis 25 12:57 pilotlog.txt
[2025-11-25 12:57:36] -rw------- 1 boinc boinc   1962621 lis 25 12:57 log.47556137._005452.job.log.1
[2025-11-25 12:57:36] -rw------- 1 boinc boinc       353 lis 25 12:57 output.list
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc       620 lis 25 12:57 runtime_log
[2025-11-25 12:57:36] -rw------- 1 boinc boinc   3942400 lis 25 12:57 result.tar.gz
[2025-11-25 12:57:36] -rw------- 1 boinc boinc       652 lis 25 12:57 u0XNDmB9Ch8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjTKKDmxayFbn.diag
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc      8915 lis 25 12:57 runtime_log.err
[2025-11-25 12:57:36] -rw-r--r-- 1 boinc boinc     21408 lis 25 12:57 stderr.txt
[2025-11-25 12:57:36] HITS file was successfully produced:
[2025-11-25 12:57:36] -rw------- 1 boinc boinc 915740362 lis 25 12:56 shared/HITS.pool.root.1
[2025-11-25 12:57:36]  *** Contents of shared directory: ***
[2025-11-25 12:57:36] razem 1298252
[2025-11-25 12:57:36] -rw-r--r-- 2 boinc boinc 409102730 lis 25 09:10 ATLAS.root_0
[2025-11-25 12:57:36] -rw-r--r-- 2 boinc boinc     15847 lis 25 09:10 start_atlas.sh
[2025-11-25 12:57:36] -rw-r--r-- 2 boinc boinc    590097 lis 25 09:10 input.tar.gz
[2025-11-25 12:57:36] -rw------- 1 boinc boinc 915740362 lis 25 12:56 HITS.pool.root.1
[2025-11-25 12:57:36] -rw------- 1 boinc boinc   3942400 lis 25 12:57 result.tar.gz
12:57:37 (1692253): run_atlas exited; CPU time 157556.749294
12:57:37 (1692253): called boinc_finish(0)

</stderr_txt>
]]>

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