Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:58:42 (17863): wrapper (7.7.26015): starting
03:58:42 (17863): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 03:58:42] Arguments: --nthreads 8
[2025-11-25 03:58:42] Threads: 8
[2025-11-25 03:58:42] Checking for CVMFS
[2025-11-25 03:58:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:58:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:58:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:58:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:58:43] 2.11.2.0 12825 116010 139704 153276 0 81 10469737 18432000 1885 130560 0 81003004 99.975 4602032 22790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 03:58:43] CVMFS is ok
[2025-11-25 03:58:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 03:58:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 03:58:43] Further information can be found at the LHC@home message board.
[2025-11-25 03:58:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:58:43] Checking for apptainer binary...
[2025-11-25 03:58:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:58:43] Running /usr/bin/apptainer --version
[2025-11-25 03:58:43] apptainer version 1.3.2-1.el7
[2025-11-25 03:58:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:58:43] c-206-8.aglt2.org
[2025-11-25 03:58:43] apptainer works
[2025-11-25 03:58:43] Set ATHENA_PROC_NUMBER=8
[2025-11-25 03:58:43] Set ATHENA_CORE_NUMBER=8
[2025-11-25 03:58:43] Starting ATLAS job with PandaID=6895475934
[2025-11-25 03:58:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:23:55]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:23:55] 2025-11-26 04:22:55,720 | INFO     | monitor loop #4988: job 0:6895475934 is in state 'finished'
[2025-11-25 23:23:56] 2025-11-26 04:22:55,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:23:56] 2025-11-26 04:22:56,988 | INFO     | time since job start (69841s) is within the limit (172800.0s)
[2025-11-25 23:23:56] 2025-11-26 04:22:57,738 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 23:23:56] 2025-11-26 04:22:57,744 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2544.5
[2025-11-25 23:23:56] 2025-11-26 04:22:57,747 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895475934/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:23:56] 2025-11-26 04:22:57,748 | INFO     | extracted standard info from prmon json
[2025-11-25 23:23:56] 2025-11-26 04:22:57,748 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:23:56] 2025-11-26 04:22:57,748 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:23:56] 2025-11-26 04:22:57,763 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:23:56] 2025-11-26 04:22:57,764 | INFO     | sum of square deviations: 465473709951.5631
[2025-11-25 23:23:56] 2025-11-26 04:22:57,788 | INFO     | sum of deviations: 2313851688154.955
[2025-11-25 23:23:56] 2025-11-26 04:22:57,788 | INFO     | mean x: 1764096052.576419
[2025-11-25 23:23:56] 2025-11-26 04:22:57,788 | INFO     | mean y: 2866807.657641921
[2025-11-25 23:23:56] 2025-11-26 04:22:57,789 | INFO     | intersect: -8766385981.60557
[2025-11-25 23:23:56] 2025-11-26 04:22:57,789 | INFO     | chi2: 5.726366827034751
[2025-11-25 23:23:56] 2025-11-26 04:22:57,791 | INFO     | sum of square deviations: 459402597414.8943
[2025-11-25 23:23:56] 2025-11-26 04:22:57,827 | INFO     | sum of deviations: 2675287439031.473
[2025-11-25 23:23:56] 2025-11-26 04:22:57,828 | INFO     | mean x: 1764095900.0789473
[2025-11-25 23:23:56] 2025-11-26 04:22:57,828 | INFO     | mean y: 2875882.5280701756
[2025-11-25 23:23:56] 2025-11-26 04:22:57,828 | INFO     | intersect: -10270169218.403088
[2025-11-25 23:23:56] 2025-11-26 04:22:57,830 | INFO     | chi2: 2.7938942302540477
[2025-11-25 23:23:56] 2025-11-26 04:22:57,830 | INFO     | current chi2=2.7938942302540477 (change=51.21000252614287 %)
[2025-11-25 23:23:56] 2025-11-26 04:22:57,832 | INFO     | sum of square deviations: 453384509128.2117
[2025-11-25 23:23:56] 2025-11-26 04:22:57,876 | INFO     | sum of deviations: 2789133441725.2236
[2025-11-25 23:23:56] 2025-11-26 04:22:57,877 | INFO     | mean x: 1764095747.581498
[2025-11-25 23:23:56] 2025-11-26 04:22:57,877 | INFO     | mean y: 2878763.66784141
[2025-11-25 23:23:56] 2025-11-26 04:22:57,877 | INFO     | intersect: -10849495644.636908
[2025-11-25 23:23:56] 2025-11-26 04:22:57,879 | INFO     | chi2: 2.3414768280069773
[2025-11-25 23:23:56] 2025-11-26 04:22:57,879 | INFO     | current chi2=2.3414768280069773 (change=16.193075505436447 %)
[2025-11-25 23:23:56] 2025-11-26 04:22:57,879 | INFO     | right removable region: 1134
[2025-11-25 23:23:56] 2025-11-26 04:22:57,881 | INFO     | sum of square deviations: 459402194814.8948
[2025-11-25 23:23:56] 2025-11-26 04:22:57,926 | INFO     | sum of deviations: 2020391634767.3145
[2025-11-25 23:23:56] 2025-11-26 04:22:57,926 | INFO     | mean x: 1764096205.0789473
[2025-11-25 23:23:56] 2025-11-26 04:22:57,927 | INFO     | mean y: 2874170.296491228
[2025-11-25 23:23:56] 2025-11-26 04:22:57,927 | INFO     | intersect: -7755393543.470888
[2025-11-25 23:23:56] 2025-11-26 04:22:57,928 | INFO     | chi2: 3.744497252889705
[2025-11-25 23:23:56] 2025-11-26 04:22:57,929 | INFO     | current chi2=3.744497252889705 (change=34.60954622725952 %)
[2025-11-25 23:23:56] 2025-11-26 04:22:57,930 | INFO     | sum of square deviations: 453383773224.3737
[2025-11-25 23:23:56] 2025-11-26 04:22:57,975 | INFO     | sum of deviations: 1944098070696.0093
[2025-11-25 23:23:56] 2025-11-26 04:22:57,975 | INFO     | mean x: 1764096357.5806167
[2025-11-25 23:23:56] 2025-11-26 04:22:57,975 | INFO     | mean y: 2876103.1911894274
[2025-11-25 23:23:56] 2025-11-26 04:22:57,975 | INFO     | intersect: -7561524141.890104
[2025-11-25 23:23:56] 2025-11-26 04:22:57,977 | INFO     | chi2: 3.694443625727945
[2025-11-25 23:23:56] 2025-11-26 04:22:57,977 | INFO     | current chi2=3.694443625727945 (change=1.3367249000685626 %)
[2025-11-25 23:23:56] 2025-11-26 04:22:57,977 | INFO     | left removable region: 20
[2025-11-25 23:23:56] 2025-11-26 04:22:57,979 | INFO     | sum of square deviations: 428681185371.72644
[2025-11-25 23:23:56] 2025-11-26 04:22:58,023 | INFO     | sum of deviations: 2301696654947.1
[2025-11-25 23:23:56] 2025-11-26 04:22:58,024 | INFO     | mean x: 1764096327.086176
[2025-11-25 23:23:56] 2025-11-26 04:22:58,024 | INFO     | mean y: 2891711.4156193896
[2025-11-25 23:23:56] 2025-11-26 04:22:58,024 | INFO     | intersect: -9468983317.430748
[2025-11-25 23:23:56] 2025-11-26 04:22:58,026 | INFO     | chi2: 0.23489701996224502
[2025-11-25 23:23:56] 2025-11-26 04:22:58,026 | INFO     | current memory leak: 5.37 B/s (using 1114 data points, chi2=0.23)
[2025-11-25 23:23:56] 2025-11-26 04:22:58,027 | INFO     | could have reported an average CPU frequency of 2632 MHz (41 samples)
[2025-11-25 23:23:56] 2025-11-26 04:22:58,027 | INFO     | ..............................
[2025-11-25 23:23:56] 2025-11-26 04:22:58,028 | INFO     | . Timing measurements:
[2025-11-25 23:23:56] 2025-11-26 04:22:58,028 | INFO     | . get job = 0 s
[2025-11-25 23:23:56] 2025-11-26 04:22:58,028 | INFO     | . initial setup = 2 s
[2025-11-25 23:23:56] 2025-11-26 04:22:58,028 | INFO     | . payload setup = 5 s
[2025-11-25 23:23:56] 2025-11-26 04:22:58,028 | INFO     | . stage-in = 0 s
[2025-11-25 23:23:56] 2025-11-26 04:22:58,028 | INFO     | . payload execution = 69805 s
[2025-11-25 23:23:56] 2025-11-26 04:22:58,029 | INFO     | . stage-out = 4 s
[2025-11-25 23:23:56] 2025-11-26 04:22:58,029 | INFO     | . log creation = 0 s
[2025-11-25 23:23:56] 2025-11-26 04:22:58,029 | INFO     | ..............................
[2025-11-25 23:23:56] 2025-11-26 04:22:58,187 | INFO     | 
[2025-11-25 23:23:56] 2025-11-26 04:22:58,187 | INFO     | job summary report
[2025-11-25 23:23:56] 2025-11-26 04:22:58,187 | INFO     | --------------------------------------------------
[2025-11-25 23:23:56] 2025-11-26 04:22:58,188 | INFO     | PanDA job id: 6895475934
[2025-11-25 23:23:56] 2025-11-26 04:22:58,188 | INFO     | task id: 47556149
[2025-11-25 23:23:56] 2025-11-26 04:22:58,188 | INFO     | errors: (none)
[2025-11-25 23:23:56] 2025-11-26 04:22:58,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:23:56] 2025-11-26 04:22:58,188 | INFO     | pilot state: finished 
[2025-11-25 23:23:56] 2025-11-26 04:22:58,188 | INFO     | transexitcode: 0
[2025-11-25 23:23:56] 2025-11-26 04:22:58,189 | INFO     | exeerrorcode: 0
[2025-11-25 23:23:56] 2025-11-26 04:22:58,189 | INFO     | exeerrordiag: 
[2025-11-25 23:23:56] 2025-11-26 04:22:58,189 | INFO     | exitcode: 0
[2025-11-25 23:23:56] 2025-11-26 04:22:58,189 | INFO     | exitmsg: OK
[2025-11-25 23:23:56] 2025-11-26 04:22:58,189 | INFO     | cpuconsumptiontime: 542332 s
[2025-11-25 23:23:56] 2025-11-26 04:22:58,189 | INFO     | nevents: 1000
[2025-11-25 23:23:56] 2025-11-26 04:22:58,190 | INFO     | neventsw: 0
[2025-11-25 23:23:56] 2025-11-26 04:22:58,190 | INFO     | pid: 28398
[2025-11-25 23:23:56] 2025-11-26 04:22:58,190 | INFO     | pgrp: 28398
[2025-11-25 23:23:56] 2025-11-26 04:22:58,190 | INFO     | corecount: 8
[2025-11-25 23:23:56] 2025-11-26 04:22:58,190 | INFO     | event service: False
[2025-11-25 23:23:56] 2025-11-26 04:22:58,190 | INFO     | sizes: {0: 2284093, 1: 2284292, 4: 2284554, 12: 2284582, 69814: 2340951, 69819: 2349945, 69822: 2350129, 69828: 2350471}
[2025-11-25 23:23:56] 2025-11-26 04:22:58,191 | INFO     | --------------------------------------------------
[2025-11-25 23:23:56] 2025-11-26 04:22:58,191 | INFO     | 
[2025-11-25 23:23:56] 2025-11-26 04:22:58,191 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 23:23:56] 2025-11-26 04:22:58,214 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,214 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,214 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,215 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,215 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,216 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,216 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,216 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,216 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,216 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,217 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,217 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,217 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,217 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,217 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:23:56] 2025-11-26 04:22:58,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,218 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:23:56] 2025-11-26 04:22:58,218 | INFO     | job 6895475934 has completed (purged errors)
[2025-11-25 23:23:56] 2025-11-26 04:22:58,218 | INFO     | overall cleanup function is called
[2025-11-25 23:23:56] 2025-11-26 04:22:59,238 | INFO     | --- collectZombieJob: --- 10, [28398]
[2025-11-25 23:23:56] 2025-11-26 04:22:59,238 | INFO     | zombie collector waiting for pid 28398
[2025-11-25 23:23:56] 2025-11-26 04:22:59,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:23:56] 2025-11-26 04:22:59,238 | INFO     | collected zombie processes
[2025-11-25 23:23:56] 2025-11-26 04:22:59,238 | INFO     | will attempt to kill all subprocesses of pid=28398
[2025-11-25 23:23:56] 2025-11-26 04:22:59,400 | INFO     | process IDs to be killed: [28398] (in reverse order)
[2025-11-25 23:23:56] 2025-11-26 04:22:59,470 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:23:56] 2025-11-26 04:22:59,471 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:23:56] 2025-11-26 04:22:59,475 | INFO     | did not find any defunct processes belonging to 28398
[2025-11-25 23:23:56] 2025-11-26 04:22:59,477 | INFO     | did not find any defunct processes belonging to 28398
[2025-11-25 23:23:56] 2025-11-26 04:22:59,478 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:23:56] 2025-11-26 04:22:59,479 | INFO     | ready for new job
[2025-11-25 23:23:56] 2025-11-26 04:22:59,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:23:56] 2025-11-26 04:22:59,482 | INFO     | ***************************************
[2025-11-25 23:23:56] 2025-11-26 04:22:59,483 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:23:56] 2025-11-26 04:22:59,483 | INFO     | ***************************************
[2025-11-25 23:23:56] 2025-11-26 04:22:59,483 | INFO     | 
[2025-11-25 23:23:56] 2025-11-26 04:22:59,484 | INFO     | architecture information:
[2025-11-25 23:23:56] 2025-11-26 04:22:59,484 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:23:56] 2025-11-26 04:22:59,493 | INFO     | cat /etc/os-release:
[2025-11-25 23:23:56] NAME="CentOS Linux"
[2025-11-25 23:23:56] VERSION="7 (Core)"
[2025-11-25 23:23:56] ID="centos"
[2025-11-25 23:23:56] ID_LIKE="rhel fedora"
[2025-11-25 23:23:56] VERSION_ID="7"
[2025-11-25 23:23:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:23:56] ANSI_COLOR="0;31"
[2025-11-25 23:23:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:23:56] HOME_URL="https://www.centos.org/"
[2025-11-25 23:23:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:23:56] 
[2025-11-25 23:23:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:23:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:23:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:23:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:23:56] 
[2025-11-25 23:23:56] 2025-11-26 04:22:59,494 | INFO     | ***************************************
[2025-11-25 23:23:56] 2025-11-26 04:22:59,996 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 23:23:56] 2025-11-26 04:23:00,016 | INFO     | sufficient remaining disk space (24974983168 B)
[2025-11-25 23:23:56] 2025-11-26 04:23:00,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:23:56] 2025-11-26 04:23:00,017 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:23:56] 2025-11-26 04:23:00,017 | INFO     | update_server=False
[2025-11-25 23:23:56] 2025-11-26 04:23:00,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:23:56] 2025-11-26 04:23:00,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:23:56] 2025-11-26 04:23:00,018 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:23:56] 2025-11-26 04:23:00,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:23:56] 2025-11-26 04:23:00,019 | INFO     | aborting loop
[2025-11-25 23:23:56] 2025-11-26 04:23:00,227 | INFO     | all data control threads have been joined
[2025-11-25 23:23:56] 2025-11-26 04:23:00,830 | INFO     | all job control threads have been joined
[2025-11-25 23:23:56] 2025-11-26 04:23:01,023 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,024 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,024 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,036 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,127 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,205 | INFO     | all payload control threads have been joined
[2025-11-25 23:23:56] 2025-11-26 04:23:01,234 | INFO     | [data] control thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,533 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,591 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,615 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,651 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,662 | INFO     | [job] validate thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,841 | INFO     | [job] control thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:01,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:02,023 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:02,206 | INFO     | [payload] control thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:02,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:23:56] 2025-11-26 04:23:06,429 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:23:56] 2025-11-26 04:23:30,278 | INFO     | PID=21882 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 23:23:56] 2025-11-26 04:23:30,278 | INFO     | .. there are 3 such processes running
[2025-11-25 23:23:56] 2025-11-26 04:23:30,278 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:23:56] 2025-11-26 04:23:30,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:23:56] 2025-11-26 04:23:30,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:23:56] 2025-11-26 04:23:50,202 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:23:56] 2025-11-26 04:23:50,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140397278381888)>', '<ExcThread(monitor, started 140396701148928)>']
[2025-11-25 23:23:56] 2025-11-26 04:23:51,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:23:56] 2025-11-26 04:23:51,385 | INFO     | [monitor] control thread has ended
[2025-11-25 23:23:56] 2025-11-26 04:23:55,635 | INFO     | all workflow threads have been joined
[2025-11-25 23:23:56] 2025-11-26 04:23:55,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:23:56] 2025-11-26 04:23:55,635 | INFO     | traces error code: 0
[2025-11-25 23:23:56] 2025-11-26 04:23:55,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:23:56] 2025-11-26 04:23:55,765 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:23:56] 2025-11-26 04:23:55,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:23:56] 2025-11-26 04:23:55,771 [wrapper] pilotpid: 21882
[2025-11-25 23:23:56] 2025-11-26 04:23:55,773 [wrapper] Pilot exit status: 0
[2025-11-25 23:23:56] 2025-11-26 04:23:55,785 [wrapper] pandaids: 6895475934
[2025-11-25 23:23:56] 2025-11-26 04:23:55,826 [wrapper] cleanup supervisor_pilot 17452 21883
[2025-11-25 23:23:56] 2025-11-26 04:23:55,828 [wrapper] Test setup, not cleaning
[2025-11-25 23:23:56] 2025-11-26 04:23:55,831 [wrapper] apfmon messages muted
[2025-11-25 23:23:56] 2025-11-26 04:23:55,833 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:23:56] 2025-11-26 04:23:55,835 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:23:56]  *** Error codes and diagnostics ***
[2025-11-25 23:23:56]     "exeErrorCode": 0,
[2025-11-25 23:23:56]     "exeErrorDiag": "",
[2025-11-25 23:23:56]     "pilotErrorCode": 0,
[2025-11-25 23:23:56]     "pilotErrorDiag": "",
[2025-11-25 23:23:56]  *** Listing of results directory ***
[2025-11-25 23:23:56] total 1327168
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 04:01 pilot3.tar.gz
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 04:16 queuedata.json
[2025-11-25 23:23:56] -rwx------ 1 boincer umatlas     36292 Nov 24 04:17 runpilot2-wrapper.sh
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas       100 Nov 25 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:23:56] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 03:58 run_atlas
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas       105 Nov 25 03:58 job.xml
[2025-11-25 23:23:56] -rw-r--r-- 2 boincer umatlas 409124478 Nov 25 03:58 EVNT.47483658._001294.pool.root.1
[2025-11-25 23:23:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:58 start_atlas.sh
[2025-11-25 23:23:56] drwxrwx--x 2 boincer umatlas      4096 Nov 25 03:58 shared
[2025-11-25 23:23:56] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 03:58 input.tar.gz
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas         0 Nov 25 03:58 boinc_lockfile
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 03:58 pandaJob.out
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas        57 Nov 25 03:58 setup.sh.local
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas    991858 Nov 25 03:58 agis_schedconf.cvmfs.json
[2025-11-25 23:23:56] drwx------ 5 boincer umatlas      4096 Nov 25 03:58 pilot3
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas       533 Nov 25 23:09 boinc_task_state.xml
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas      5953 Nov 25 23:20 init_data.xml
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas 922065661 Nov 25 23:22 HITS.47556149._002806.pool.root.1
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas      1067 Nov 25 23:22 memory_monitor_summary.json
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas   1516240 Nov 25 23:22 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas   2302103 Nov 25 23:22 log.47556149._002806.job.log.tgz.1
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas        95 Nov 25 23:22 pilot_heartbeat.json
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas      8662 Nov 25 23:22 heartbeat.json
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 23:23 boinc_mmap_file
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas        29 Nov 25 23:23 wrapper_checkpoint.txt
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas      4821 Nov 25 23:23 pilotlog.txt
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas   9651045 Nov 25 23:23 log.47556149._002806.job.log.1
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas       353 Nov 25 23:23 output.list
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas       620 Nov 25 23:23 runtime_log
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas  11970560 Nov 25 23:23 result.tar.gz
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas       667 Nov 25 23:23 Xm2NDmHshh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7zIKDmnDpVjn.diag
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas      9338 Nov 25 23:23 runtime_log.err
[2025-11-25 23:23:56] -rw-r--r-- 1 boincer umatlas     21292 Nov 25 23:23 stderr.txt
[2025-11-25 23:23:56] HITS file was successfully produced:
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas 922065661 Nov 25 23:22 shared/HITS.pool.root.1
[2025-11-25 23:23:56]  *** Contents of shared directory: ***
[2025-11-25 23:23:56] total 1312288
[2025-11-25 23:23:56] -rw-r--r-- 2 boincer umatlas 409124478 Nov 25 03:58 ATLAS.root_0
[2025-11-25 23:23:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 03:58 start_atlas.sh
[2025-11-25 23:23:56] -rw-r--r-- 2 boincer umatlas    590107 Nov 25 03:58 input.tar.gz
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas 922065661 Nov 25 23:22 HITS.pool.root.1
[2025-11-25 23:23:56] -rw------- 1 boincer umatlas  11970560 Nov 25 23:23 result.tar.gz
23:23:57 (17863): run_atlas exited; CPU time 541463.203344
23:23:57 (17863): called boinc_finish(0)

</stderr_txt>
]]>

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