Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:57:44 (1154386): wrapper (7.7.26015): starting
20:57:44 (1154386): wrapper: running run_atlas (--nthreads 10)
[2025-11-25 20:57:44] Arguments: --nthreads 10
[2025-11-25 20:57:44] Threads: 10
[2025-11-25 20:57:44] Checking for CVMFS
[2025-11-25 20:57:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:57:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:57:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:57:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:57:45] 2.13.3.0 8980 29422 321836 153304 1 134 32284175 32935936 23818 16776704 0 158061718 99.763 94612096 32643 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 20:57:45] CVMFS is ok
[2025-11-25 20:57:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:57:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:57:45] Further information can be found at the LHC@home message board.
[2025-11-25 20:57:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:57:45] Checking for apptainer binary...
[2025-11-25 20:57:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:57:45] Running /usr/bin/apptainer --version
[2025-11-25 20:57:45] apptainer version 1.4.4-1.el9
[2025-11-25 20:57:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:57:45] c-5-4.aglt2.org
[2025-11-25 20:57:45] apptainer works
[2025-11-25 20:57:45] Set ATHENA_PROC_NUMBER=10
[2025-11-25 20:57:45] Set ATHENA_CORE_NUMBER=10
[2025-11-25 20:57:45] Starting ATLAS job with PandaID=6895476899
[2025-11-25 20:57:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 17:31:47]  *** The last 200 lines of the pilot log: ***
[2025-11-26 17:31:47] 2025-11-26 22:31:08,692 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1560999999997
[2025-11-26 17:31:47] 2025-11-26 22:31:08,716 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895476899/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 17:31:47] 2025-11-26 22:31:08,717 | INFO     | extracted standard info from prmon json
[2025-11-26 17:31:47] 2025-11-26 22:31:08,717 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 17:31:47] 2025-11-26 22:31:08,717 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 17:31:47] 2025-11-26 22:31:08,798 | INFO     | fitting pss+swap vs Time
[2025-11-26 17:31:47] 2025-11-26 22:31:08,800 | INFO     | sum of square deviations: 552061831316.959
[2025-11-26 17:31:47] 2025-11-26 22:31:08,854 | INFO     | sum of deviations: 3128453403944.4966
[2025-11-26 17:31:47] 2025-11-26 22:31:08,855 | INFO     | mean x: 1764159241.4942243
[2025-11-26 17:31:47] 2025-11-26 22:31:08,855 | INFO     | mean y: 3246378.9273927393
[2025-11-26 17:31:47] 2025-11-26 22:31:08,855 | INFO     | intersect: -9993985219.18328
[2025-11-26 17:31:47] 2025-11-26 22:31:08,865 | INFO     | chi2: 8.66556382567277
[2025-11-26 17:31:47] 2025-11-26 22:31:08,867 | INFO     | sum of square deviations: 545258661701.94684
[2025-11-26 17:31:47] 2025-11-26 22:31:09,039 | INFO     | sum of deviations: 3579532441424.984
[2025-11-26 17:31:47] 2025-11-26 22:31:09,039 | INFO     | mean x: 1764159089.006628
[2025-11-26 17:31:47] 2025-11-26 22:31:09,039 | INFO     | mean y: 3256490.7514498755
[2025-11-26 17:31:47] 2025-11-26 22:31:09,039 | INFO     | intersect: -11578154561.432528
[2025-11-26 17:31:47] 2025-11-26 22:31:09,041 | INFO     | chi2: 5.584227518179011
[2025-11-26 17:31:47] 2025-11-26 22:31:09,041 | INFO     | current chi2=5.584227518179011 (change=35.55840530958795 %)
[2025-11-26 17:31:47] 2025-11-26 22:31:09,055 | INFO     | sum of square deviations: 538511632674.05994
[2025-11-26 17:31:47] 2025-11-26 22:31:09,112 | INFO     | monitor loop #4177: job 0:6895476899 is in state 'finished'
[2025-11-26 17:31:47] 2025-11-26 22:31:09,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 17:31:47] 2025-11-26 22:31:09,209 | INFO     | sum of deviations: 3958490906143.2754
[2025-11-26 17:31:47] 2025-11-26 22:31:09,209 | INFO     | mean x: 1764158936.5191348
[2025-11-26 17:31:47] 2025-11-26 22:31:09,209 | INFO     | mean y: 3265050.1181364395
[2025-11-26 17:31:47] 2025-11-26 22:31:09,209 | INFO     | intersect: -12964713139.18343
[2025-11-26 17:31:47] 2025-11-26 22:31:09,211 | INFO     | chi2: 3.1763532473653164
[2025-11-26 17:31:47] 2025-11-26 22:31:09,211 | INFO     | current chi2=3.1763532473653164 (change=43.119200694725464 %)
[2025-11-26 17:31:47] 2025-11-26 22:31:09,224 | INFO     | sum of square deviations: 531820218641.028
[2025-11-26 17:31:47] 2025-11-26 22:31:09,455 | INFO     | sum of deviations: 4144234516910.9805
[2025-11-26 17:31:47] 2025-11-26 22:31:09,472 | INFO     | mean x: 1764158784.0284042
[2025-11-26 17:31:47] 2025-11-26 22:31:09,472 | INFO     | mean y: 3269280.1771094403
[2025-11-26 17:31:47] 2025-11-26 22:31:09,472 | INFO     | intersect: -13744022510.955618
[2025-11-26 17:31:47] 2025-11-26 22:31:09,474 | INFO     | chi2: 2.4696765316058595
[2025-11-26 17:31:47] 2025-11-26 22:31:09,474 | INFO     | current chi2=2.4696765316058595 (change=22.248051797942267 %)
[2025-11-26 17:31:47] 2025-11-26 22:31:09,474 | INFO     | right removable region: 1196
[2025-11-26 17:31:47] 2025-11-26 22:31:09,475 | INFO     | sum of square deviations: 545256595519.97046
[2025-11-26 17:31:47] 2025-11-26 22:31:09,630 | INFO     | sum of deviations: 2785261349054.5747
[2025-11-26 17:31:47] 2025-11-26 22:31:09,631 | INFO     | mean x: 1764159394.004971
[2025-11-26 17:31:47] 2025-11-26 22:31:09,631 | INFO     | mean y: 3254060.7373653688
[2025-11-26 17:31:47] 2025-11-26 22:31:09,631 | INFO     | intersect: -9008365448.436678
[2025-11-26 17:31:47] 2025-11-26 22:31:09,640 | INFO     | chi2: 6.700853973604999
[2025-11-26 17:31:47] 2025-11-26 22:31:09,641 | INFO     | current chi2=6.700853973604999 (change=22.672614172514464 %)
[2025-11-26 17:31:47] 2025-11-26 22:31:09,641 | INFO     | left removable region: 10
[2025-11-26 17:31:47] 2025-11-26 22:31:09,665 | INFO     | sum of square deviations: 517291341573.465
[2025-11-26 17:31:47] 2025-11-26 22:31:09,810 | INFO     | sum of deviations: 3714641894734.0645
[2025-11-26 17:31:47] 2025-11-26 22:31:09,810 | INFO     | mean x: 1764159058.5505903
[2025-11-26 17:31:47] 2025-11-26 22:31:09,810 | INFO     | mean y: 3280123.1989881955
[2025-11-26 17:31:47] 2025-11-26 22:31:09,810 | INFO     | intersect: -12665053214.70968
[2025-11-26 17:31:47] 2025-11-26 22:31:09,812 | INFO     | chi2: 0.36137482356650885
[2025-11-26 17:31:47] 2025-11-26 22:31:09,812 | INFO     | current memory leak: 7.18 B/s (using 1186 data points, chi2=0.36)
[2025-11-26 17:31:47] 2025-11-26 22:31:09,816 | INFO     | could have reported an average CPU frequency of 2601 MHz (44 samples)
[2025-11-26 17:31:47] 2025-11-26 22:31:09,817 | INFO     | ..............................
[2025-11-26 17:31:47] 2025-11-26 22:31:09,817 | INFO     | . Timing measurements:
[2025-11-26 17:31:47] 2025-11-26 22:31:09,817 | INFO     | . get job = 0 s
[2025-11-26 17:31:47] 2025-11-26 22:31:09,817 | INFO     | . initial setup = 2 s
[2025-11-26 17:31:47] 2025-11-26 22:31:09,817 | INFO     | . payload setup = 6 s
[2025-11-26 17:31:47] 2025-11-26 22:31:09,817 | INFO     | . stage-in = 0 s
[2025-11-26 17:31:47] 2025-11-26 22:31:09,817 | INFO     | . payload execution = 73927 s
[2025-11-26 17:31:47] 2025-11-26 22:31:09,818 | INFO     | . stage-out = 12 s
[2025-11-26 17:31:47] 2025-11-26 22:31:09,818 | INFO     | . log creation = 1 s
[2025-11-26 17:31:47] 2025-11-26 22:31:09,818 | INFO     | ..............................
[2025-11-26 17:31:47] 2025-11-26 22:31:09,870 | INFO     | time since job start (73992s) is within the limit (172800.0s)
[2025-11-26 17:31:47] 2025-11-26 22:31:10,053 | INFO     | 
[2025-11-26 17:31:47] 2025-11-26 22:31:10,053 | INFO     | job summary report
[2025-11-26 17:31:47] 2025-11-26 22:31:10,054 | INFO     | --------------------------------------------------
[2025-11-26 17:31:47] 2025-11-26 22:31:10,054 | INFO     | PanDA job id: 6895476899
[2025-11-26 17:31:47] 2025-11-26 22:31:10,054 | INFO     | task id: 47556161
[2025-11-26 17:31:47] 2025-11-26 22:31:10,054 | INFO     | errors: (none)
[2025-11-26 17:31:47] 2025-11-26 22:31:10,054 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 17:31:47] 2025-11-26 22:31:10,054 | INFO     | pilot state: finished 
[2025-11-26 17:31:47] 2025-11-26 22:31:10,054 | INFO     | transexitcode: 0
[2025-11-26 17:31:47] 2025-11-26 22:31:10,054 | INFO     | exeerrorcode: 0
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | exeerrordiag: 
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | exitcode: 0
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | exitmsg: OK
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | cpuconsumptiontime: 303964 s
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | nevents: 1000
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | neventsw: 0
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | pid: 1166759
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | pgrp: 1166759
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | corecount: 10
[2025-11-26 17:31:47] 2025-11-26 22:31:10,055 | INFO     | event service: False
[2025-11-26 17:31:47] 2025-11-26 22:31:10,056 | INFO     | sizes: {0: 2284141, 1: 2284340, 5: 2284602, 11: 2284658, 73938: 2343118, 73952: 2352112, 73955: 2352296, 73978: 2352542}
[2025-11-26 17:31:47] 2025-11-26 22:31:10,056 | INFO     | --------------------------------------------------
[2025-11-26 17:31:47] 2025-11-26 22:31:10,056 | INFO     | 
[2025-11-26 17:31:47] 2025-11-26 22:31:10,056 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 17:31:47] 2025-11-26 22:31:10,104 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,104 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,104 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,104 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,106 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 17:31:47] 2025-11-26 22:31:10,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,106 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 17:31:47] 2025-11-26 22:31:10,106 | INFO     | job 6895476899 has completed (purged errors)
[2025-11-26 17:31:47] 2025-11-26 22:31:10,107 | INFO     | overall cleanup function is called
[2025-11-26 17:31:47] 2025-11-26 22:31:11,243 | INFO     | --- collectZombieJob: --- 10, [1166759]
[2025-11-26 17:31:47] 2025-11-26 22:31:11,244 | INFO     | zombie collector waiting for pid 1166759
[2025-11-26 17:31:47] 2025-11-26 22:31:11,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 17:31:47] 2025-11-26 22:31:11,244 | INFO     | collected zombie processes
[2025-11-26 17:31:47] 2025-11-26 22:31:11,244 | INFO     | will attempt to kill all subprocesses of pid=1166759
[2025-11-26 17:31:47] 2025-11-26 22:31:12,546 | INFO     | process IDs to be killed: [1166759] (in reverse order)
[2025-11-26 17:31:47] 2025-11-26 22:31:12,774 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 17:31:47] 2025-11-26 22:31:12,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 17:31:47] 2025-11-26 22:31:12,795 | INFO     | did not find any defunct processes belonging to 1166759
[2025-11-26 17:31:47] 2025-11-26 22:31:12,867 | INFO     | did not find any defunct processes belonging to 1166759
[2025-11-26 17:31:47] 2025-11-26 22:31:12,869 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 17:31:47] 2025-11-26 22:31:12,870 | INFO     | ready for new job
[2025-11-26 17:31:47] 2025-11-26 22:31:12,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 17:31:47] 2025-11-26 22:31:12,875 | INFO     | ***************************************
[2025-11-26 17:31:47] 2025-11-26 22:31:12,876 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 17:31:47] 2025-11-26 22:31:12,876 | INFO     | ***************************************
[2025-11-26 17:31:47] 2025-11-26 22:31:12,876 | INFO     | 
[2025-11-26 17:31:47] 2025-11-26 22:31:12,878 | INFO     | architecture information:
[2025-11-26 17:31:47] 2025-11-26 22:31:12,879 | INFO     | executing command: cat /etc/os-release
[2025-11-26 17:31:47] 2025-11-26 22:31:12,909 | INFO     | cat /etc/os-release:
[2025-11-26 17:31:47] NAME="CentOS Linux"
[2025-11-26 17:31:47] VERSION="7 (Core)"
[2025-11-26 17:31:47] ID="centos"
[2025-11-26 17:31:47] ID_LIKE="rhel fedora"
[2025-11-26 17:31:47] VERSION_ID="7"
[2025-11-26 17:31:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 17:31:47] ANSI_COLOR="0;31"
[2025-11-26 17:31:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 17:31:47] HOME_URL="https://www.centos.org/"
[2025-11-26 17:31:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 17:31:47] 
[2025-11-26 17:31:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 17:31:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 17:31:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 17:31:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 17:31:47] 
[2025-11-26 17:31:47] 2025-11-26 22:31:12,910 | INFO     | ***************************************
[2025-11-26 17:31:47] 2025-11-26 22:31:13,413 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 17:31:47] 2025-11-26 22:31:13,438 | INFO     | sufficient remaining disk space (69285707776 B)
[2025-11-26 17:31:47] 2025-11-26 22:31:13,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 17:31:47] 2025-11-26 22:31:13,438 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 17:31:47] 2025-11-26 22:31:13,438 | INFO     | update_server=False
[2025-11-26 17:31:47] 2025-11-26 22:31:13,438 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 17:31:47] 2025-11-26 22:31:13,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:31:47] 2025-11-26 22:31:13,443 | INFO     | aborting loop
[2025-11-26 17:31:47] 2025-11-26 22:31:13,499 | INFO     | all job control threads have been joined
[2025-11-26 17:31:47] 2025-11-26 22:31:14,109 | INFO     | all payload control threads have been joined
[2025-11-26 17:31:47] 2025-11-26 22:31:14,234 | INFO     | all data control threads have been joined
[2025-11-26 17:31:47] 2025-11-26 22:31:14,444 | INFO     | [job] retrieve thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:14,448 | INFO     | [job] job monitor thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:14,506 | INFO     | [job] control thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:14,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 17:31:47] 2025-11-26 22:31:15,066 | INFO     | [monitor] cgroup control has ended
[2025-11-26 17:31:47] 2025-11-26 22:31:15,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 17:31:47] 2025-11-26 22:31:15,115 | INFO     | [payload] control thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:15,136 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:15,179 | INFO     | [payload] validate_post thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:15,180 | INFO     | [payload] failed_post thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:15,240 | INFO     | [data] control thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:15,399 | INFO     | [data] copytool_in thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:15,400 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:15,466 | INFO     | [job] validate thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:15,566 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:15,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:16,105 | INFO     | [job] queue monitor thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:16,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 17:31:47] 2025-11-26 22:31:16,961 | INFO     | [data] copytool_out thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:20,323 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 17:31:47] 2025-11-26 22:31:20,466 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637801666368)>', '<ExcThread(monitor, started 139637020415744)>']
[2025-11-26 17:31:47] 2025-11-26 22:31:25,492 | INFO     | all workflow threads have been joined
[2025-11-26 17:31:47] 2025-11-26 22:31:25,493 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 17:31:47] 2025-11-26 22:31:25,493 | INFO     | traces error code: 0
[2025-11-26 17:31:47] 2025-11-26 22:31:25,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 17:31:47] 2025-11-26 22:31:46,914 | INFO     | PID=1158337 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 17:31:47] 2025-11-26 22:31:46,918 | INFO     | .. there are 38 such processes running
[2025-11-26 17:31:47] 2025-11-26 22:31:46,918 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 17:31:47] 2025-11-26 22:31:46,919 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 17:31:47] 2025-11-26 22:31:46,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 17:31:47] 2025-11-26 22:31:46,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 17:31:47] 2025-11-26 22:31:46,919 | CRITICAL | thread 'MainThread' is not alive
[2025-11-26 17:31:47] 2025-11-26 22:31:46,919 | INFO     | [monitor] control thread has ended
[2025-11-26 17:31:47] 2025-11-26 22:31:47,149 [wrapper] ==== pilot stdout END ====
[2025-11-26 17:31:47] 2025-11-26 22:31:47,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 17:31:47] 2025-11-26 22:31:47,184 [wrapper] pilotpid: 1158337
[2025-11-26 17:31:47] 2025-11-26 22:31:47,202 [wrapper] Pilot exit status: 0
[2025-11-26 17:31:47] 2025-11-26 22:31:47,268 [wrapper] pandaids: 6895476899
[2025-11-26 17:31:47] 2025-11-26 22:31:47,429 [wrapper] cleanup supervisor_pilot 1858732 1158338
[2025-11-26 17:31:47] 2025-11-26 22:31:47,433 [wrapper] Test setup, not cleaning
[2025-11-26 17:31:47] 2025-11-26 22:31:47,436 [wrapper] apfmon messages muted
[2025-11-26 17:31:47] 2025-11-26 22:31:47,443 [wrapper] ==== wrapper stdout END ====
[2025-11-26 17:31:47] 2025-11-26 22:31:47,458 [wrapper] ==== wrapper stderr END ====
[2025-11-26 17:31:47]  *** Error codes and diagnostics ***
[2025-11-26 17:31:47]     "exeErrorCode": 0,
[2025-11-26 17:31:47]     "exeErrorDiag": "",
[2025-11-26 17:31:47]     "pilotErrorCode": 0,
[2025-11-26 17:31:47]     "pilotErrorDiag": "",
[2025-11-26 17:31:47]  *** Listing of results directory ***
[2025-11-26 17:31:47] total 1322176
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-11-26 17:31:47] -rwx------. 1 boincer umatlas     36292 Nov 24 04:36 runpilot2-wrapper.sh
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 04:36 queuedata.json
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas       100 Nov 25 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 17:31:47] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 20:57 run_atlas
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas       105 Nov 25 20:57 job.xml
[2025-11-26 17:31:47] -rw-r--r--. 2 boincer umatlas 409545882 Nov 25 20:57 EVNT.47483658._002032.pool.root.1
[2025-11-26 17:31:47] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:57 start_atlas.sh
[2025-11-26 17:31:47] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 20:57 shared
[2025-11-26 17:31:47] -rw-r--r--. 2 boincer umatlas    611273 Nov 25 20:57 input.tar.gz
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas         0 Nov 25 20:57 boinc_lockfile
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 20:57 pandaJob.out
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas        57 Nov 25 20:57 setup.sh.local
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas    991877 Nov 25 20:57 agis_schedconf.cvmfs.json
[2025-11-26 17:31:47] drwx------. 7 boincer umatlas      4096 Nov 25 20:57 pilot3
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas       533 Nov 26 17:08 boinc_task_state.xml
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas      6660 Nov 26 17:28 init_data.xml
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas 917444437 Nov 26 17:29 HITS.47556161._000152.pool.root.1
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas      1075 Nov 26 17:30 memory_monitor_summary.json
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas   1516240 Nov 26 17:30 agis_ddmendpoints.agis.ALL.json
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas   2501249 Nov 26 17:30 log.47556161._000152.job.log.tgz.1
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas      8632 Nov 26 17:31 heartbeat.json
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 17:31 boinc_mmap_file
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas        29 Nov 26 17:31 wrapper_checkpoint.txt
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas       893 Nov 26 17:31 pilotlog.txt
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas        95 Nov 26 17:31 pilot_heartbeat.json
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas   8973499 Nov 26 17:31 log.47556161._000152.job.log.1
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas       353 Nov 26 17:31 output.list
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas       620 Nov 26 17:31 runtime_log
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas  11499520 Nov 26 17:31 result.tar.gz
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas      9330 Nov 26 17:31 runtime_log.err
[2025-11-26 17:31:47] -rw-------. 1 boincer umatlas       657 Nov 26 17:31 qnqKDmGBih8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmK0IKDmkoT9im.diag
[2025-11-26 17:31:47] -rw-r--r--. 1 boincer umatlas     21346 Nov 26 17:31 stderr.txt
[2025-11-26 17:31:48] HITS file was successfully produced:
[2025-11-26 17:31:48] -rw-------. 1 boincer umatlas 917444437 Nov 26 17:29 shared/HITS.pool.root.1
[2025-11-26 17:31:48]  *** Contents of shared directory: ***
[2025-11-26 17:31:48] total 1307748
[2025-11-26 17:31:48] -rw-r--r--. 2 boincer umatlas 409545882 Nov 25 20:57 ATLAS.root_0
[2025-11-26 17:31:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:57 start_atlas.sh
[2025-11-26 17:31:48] -rw-r--r--. 2 boincer umatlas    611273 Nov 25 20:57 input.tar.gz
[2025-11-26 17:31:48] -rw-------. 1 boincer umatlas 917444437 Nov 26 17:29 HITS.pool.root.1
[2025-11-26 17:31:48] -rw-------. 1 boincer umatlas  11499520 Nov 26 17:31 result.tar.gz
17:31:50 (1154386): run_atlas exited; CPU time 306499.684881
17:31:50 (1154386): called boinc_finish(0)

</stderr_txt>
]]>

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