Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:40:31 (3067202): wrapper (7.7.26015): starting
02:40:31 (3067202): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 02:40:31] Arguments: --nthreads 12
[2025-11-25 02:40:31] Threads: 12
[2025-11-25 02:40:31] Checking for CVMFS
[2025-11-25 02:40:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:40:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:40:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:40:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:40:34] 2.8.1.0 3067495 0 30200 153275 3 1 3783936 4096000 0 130560 0 0 0.000 1292 1138 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 02:40:34] CVMFS is ok
[2025-11-25 02:40:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 02:40:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 02:40:34] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 02:40:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 02:40:34] Further information can be found at the LHC@home message board.
[2025-11-25 02:40:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:40:34] Checking for apptainer binary...
[2025-11-25 02:40:34] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-25 02:40:34] apptainer is not installed, using version from CVMFS
[2025-11-25 02:40:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:40:35] farmville.blisteringsheep.pec
[2025-11-25 02:40:35] apptainer works
[2025-11-25 02:40:35] Set ATHENA_PROC_NUMBER=12
[2025-11-25 02:40:35] Set ATHENA_CORE_NUMBER=12
[2025-11-25 02:40:35] Starting ATLAS job with PandaID=6895475917
[2025-11-25 02:40:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:23:18]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:23:18] 2025-11-25 12:22:24,825 | INFO     | monitor loop #1234: job 0:6895475917 is in state 'finished'
[2025-11-25 07:23:18] 2025-11-25 12:22:24,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 07:23:18] 2025-11-25 12:22:24,879 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 07:23:18] 2025-11-25 12:22:24,885 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2931.3396250000005
[2025-11-25 07:23:18] 2025-11-25 12:22:24,893 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6895475917/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 07:23:18] 2025-11-25 12:22:24,894 | INFO     | extracted standard info from prmon json
[2025-11-25 07:23:18] 2025-11-25 12:22:24,895 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 07:23:18] 2025-11-25 12:22:24,895 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 07:23:18] 2025-11-25 12:22:24,900 | INFO     | fitting pss+swap vs Time
[2025-11-25 07:23:18] 2025-11-25 12:22:24,901 | INFO     | sum of square deviations: 6591399477.241888
[2025-11-25 07:23:18] 2025-11-25 12:22:24,903 | INFO     | sum of deviations: 137533405533.64243
[2025-11-25 07:23:18] 2025-11-25 12:22:24,903 | INFO     | mean x: 1764064883.5054152
[2025-11-25 07:23:18] 2025-11-25 12:22:24,903 | INFO     | mean y: 3541724.238267148
[2025-11-25 07:23:18] 2025-11-25 12:22:24,903 | INFO     | intersect: -36804703906.829025
[2025-11-25 07:23:18] 2025-11-25 12:22:24,904 | INFO     | chi2: 5.693219232213893
[2025-11-25 07:23:18] 2025-11-25 12:22:24,904 | INFO     | sum of square deviations: 6240961185.941217
[2025-11-25 07:23:18] 2025-11-25 12:22:24,906 | INFO     | sum of deviations: 251553947354.7059
[2025-11-25 07:23:18] 2025-11-25 12:22:24,906 | INFO     | mean x: 1764064731.014706
[2025-11-25 07:23:18] 2025-11-25 12:22:24,906 | INFO     | mean y: 3591261.8235294116
[2025-11-25 07:23:18] 2025-11-25 12:22:24,906 | INFO     | intersect: -71100431540.88235
[2025-11-25 07:23:18] 2025-11-25 12:22:24,907 | INFO     | chi2: 2.4042606170447964
[2025-11-25 07:23:18] 2025-11-25 12:22:24,907 | INFO     | current chi2=2.4042606170447964 (change=57.76975171725709 %)
[2025-11-25 07:23:18] 2025-11-25 12:22:24,908 | INFO     | sum of square deviations: 5903157946.636717
[2025-11-25 07:23:18] 2025-11-25 12:22:24,909 | INFO     | sum of deviations: 274079689662.88013
[2025-11-25 07:23:18] 2025-11-25 12:22:24,910 | INFO     | mean x: 1764064578.5205994
[2025-11-25 07:23:18] 2025-11-25 12:22:24,910 | INFO     | mean y: 3601309.7490636706
[2025-11-25 07:23:18] 2025-11-25 12:22:24,910 | INFO     | intersect: -81900741517.74936
[2025-11-25 07:23:18] 2025-11-25 12:22:24,910 | INFO     | chi2: 2.0336452715047173
[2025-11-25 07:23:18] 2025-11-25 12:22:24,910 | INFO     | current chi2=2.0336452715047173 (change=15.4149405814259 %)
[2025-11-25 07:23:18] 2025-11-25 12:22:24,910 | INFO     | right removable region: 266
[2025-11-25 07:23:18] 2025-11-25 12:22:24,911 | INFO     | sum of square deviations: 6240875785.941217
[2025-11-25 07:23:18] 2025-11-25 12:22:24,913 | INFO     | sum of deviations: 53460330129.27931
[2025-11-25 07:23:18] 2025-11-25 12:22:24,913 | INFO     | mean x: 1764065036.014706
[2025-11-25 07:23:18] 2025-11-25 12:22:24,913 | INFO     | mean y: 3578108.680147059
[2025-11-25 07:23:18] 2025-11-25 12:22:24,913 | INFO     | intersect: -15107682302.448544
[2025-11-25 07:23:18] 2025-11-25 12:22:24,914 | INFO     | chi2: 3.770083495675327
[2025-11-25 07:23:18] 2025-11-25 12:22:24,914 | INFO     | current chi2=3.770083495675327 (change=33.77940771465296 %)
[2025-11-25 07:23:18] 2025-11-25 12:22:24,914 | INFO     | sum of square deviations: 5903003494.591726
[2025-11-25 07:23:18] 2025-11-25 12:22:24,916 | INFO     | sum of deviations: 35229639139.22847
[2025-11-25 07:23:18] 2025-11-25 12:22:24,916 | INFO     | mean x: 1764065188.5243447
[2025-11-25 07:23:18] 2025-11-25 12:22:24,916 | INFO     | mean y: 3586323.734082397
[2025-11-25 07:23:18] 2025-11-25 12:22:24,916 | INFO     | intersect: -10524508410.874582
[2025-11-25 07:23:18] 2025-11-25 12:22:24,917 | INFO     | chi2: 3.7348234441105475
[2025-11-25 07:23:18] 2025-11-25 12:22:24,917 | INFO     | current chi2=3.7348234441105475 (change=0.9352591688016068 %)
[2025-11-25 07:23:18] 2025-11-25 12:22:24,917 | INFO     | left removable region: 20
[2025-11-25 07:23:18] 2025-11-25 12:22:24,918 | INFO     | sum of square deviations: 4617002312.085342
[2025-11-25 07:23:18] 2025-11-25 12:22:24,919 | INFO     | sum of deviations: 142054608072.29272
[2025-11-25 07:23:18] 2025-11-25 12:22:24,919 | INFO     | mean x: 1764065158.0609756
[2025-11-25 07:23:18] 2025-11-25 12:22:24,919 | INFO     | mean y: 3662869.4471544717
[2025-11-25 07:23:18] 2025-11-25 12:22:24,920 | INFO     | intersect: -54272589924.7938
[2025-11-25 07:23:18] 2025-11-25 12:22:24,920 | INFO     | chi2: 0.007707880642332417
[2025-11-25 07:23:18] 2025-11-25 12:22:24,920 | INFO     | current memory leak: 30.77 B/s (using 246 data points, chi2=0.01)
[2025-11-25 07:23:18] 2025-11-25 12:22:24,921 | INFO     | could have reported an average CPU frequency of 2901 MHz (13 samples)
[2025-11-25 07:23:18] 2025-11-25 12:22:24,921 | INFO     | ..............................
[2025-11-25 07:23:18] 2025-11-25 12:22:24,921 | INFO     | . Timing measurements:
[2025-11-25 07:23:18] 2025-11-25 12:22:24,921 | INFO     | . get job = 0 s
[2025-11-25 07:23:18] 2025-11-25 12:22:24,921 | INFO     | . initial setup = 2 s
[2025-11-25 07:23:18] 2025-11-25 12:22:24,922 | INFO     | . payload setup = 3 s
[2025-11-25 07:23:18] 2025-11-25 12:22:24,922 | INFO     | . stage-in = 0 s
[2025-11-25 07:23:18] 2025-11-25 12:22:24,922 | INFO     | . payload execution = 16864 s
[2025-11-25 07:23:18] 2025-11-25 12:22:24,922 | INFO     | . stage-out = 3 s
[2025-11-25 07:23:18] 2025-11-25 12:22:24,922 | INFO     | . log creation = 0 s
[2025-11-25 07:23:18] 2025-11-25 12:22:24,922 | INFO     | ..............................
[2025-11-25 07:23:18] 2025-11-25 12:22:25,016 | INFO     | 
[2025-11-25 07:23:18] 2025-11-25 12:22:25,016 | INFO     | job summary report
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | --------------------------------------------------
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | PanDA job id: 6895475917
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | task id: 47556149
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | errors: (none)
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | pilot state: finished 
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | transexitcode: 0
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | exeerrorcode: 0
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | exeerrordiag: 
[2025-11-25 07:23:18] 2025-11-25 12:22:25,017 | INFO     | exitcode: 0
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | exitmsg: OK
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | cpuconsumptiontime: 184359 s
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | nevents: 1000
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | neventsw: 0
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | pid: 3079165
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | pgrp: 3079165
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | corecount: 12
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | event service: False
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | sizes: {0: 2284259, 2: 2284521, 11: 2284549, 16871: 2317455, 16872: 2317454, 16876: 2326509, 16879: 2326693, 16886: 2326939}
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | --------------------------------------------------
[2025-11-25 07:23:18] 2025-11-25 12:22:25,018 | INFO     | 
[2025-11-25 07:23:18] 2025-11-25 12:22:25,019 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-25 07:23:18] 2025-11-25 12:22:25,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,039 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,039 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,039 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,040 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 07:23:18] 2025-11-25 12:22:25,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,041 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 07:23:18] 2025-11-25 12:22:25,041 | INFO     | job 6895475917 has completed (purged errors)
[2025-11-25 07:23:18] 2025-11-25 12:22:25,041 | INFO     | overall cleanup function is called
[2025-11-25 07:23:18] 2025-11-25 12:22:26,058 | INFO     | --- collectZombieJob: --- 10, [3079165]
[2025-11-25 07:23:18] 2025-11-25 12:22:26,058 | INFO     | zombie collector waiting for pid 3079165
[2025-11-25 07:23:18] 2025-11-25 12:22:26,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 07:23:18] 2025-11-25 12:22:26,059 | INFO     | collected zombie processes
[2025-11-25 07:23:18] 2025-11-25 12:22:26,059 | INFO     | will attempt to kill all subprocesses of pid=3079165
[2025-11-25 07:23:18] 2025-11-25 12:22:26,325 | INFO     | process IDs to be killed: [3079165] (in reverse order)
[2025-11-25 07:23:18] 2025-11-25 12:22:26,386 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 07:23:18] 2025-11-25 12:22:26,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 07:23:18] 2025-11-25 12:22:26,391 | INFO     | did not find any defunct processes belonging to 3079165
[2025-11-25 07:23:18] 2025-11-25 12:22:26,395 | INFO     | did not find any defunct processes belonging to 3079165
[2025-11-25 07:23:18] 2025-11-25 12:22:26,395 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 07:23:18] 2025-11-25 12:22:26,396 | INFO     | ready for new job
[2025-11-25 07:23:18] 2025-11-25 12:22:26,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 07:23:18] 2025-11-25 12:22:26,398 | INFO     | ***************************************
[2025-11-25 07:23:18] 2025-11-25 12:22:26,398 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 07:23:18] 2025-11-25 12:22:26,398 | INFO     | ***************************************
[2025-11-25 07:23:18] 2025-11-25 12:22:26,398 | INFO     | 
[2025-11-25 07:23:18] 2025-11-25 12:22:26,399 | INFO     | architecture information:
[2025-11-25 07:23:18] 2025-11-25 12:22:26,399 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:23:18] 2025-11-25 12:22:26,413 | INFO     | cat /etc/os-release:
[2025-11-25 07:23:18] NAME="CentOS Linux"
[2025-11-25 07:23:18] VERSION="7 (Core)"
[2025-11-25 07:23:18] ID="centos"
[2025-11-25 07:23:18] ID_LIKE="rhel fedora"
[2025-11-25 07:23:18] VERSION_ID="7"
[2025-11-25 07:23:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:23:18] ANSI_COLOR="0;31"
[2025-11-25 07:23:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:23:18] HOME_URL="https://www.centos.org/"
[2025-11-25 07:23:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:23:18] 
[2025-11-25 07:23:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:23:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:23:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:23:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:23:18] 
[2025-11-25 07:23:18] 2025-11-25 12:22:26,414 | INFO     | ***************************************
[2025-11-25 07:23:18] 2025-11-25 12:22:26,917 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-25 07:23:18] 2025-11-25 12:22:26,933 | INFO     | sufficient remaining disk space (340598456320 B)
[2025-11-25 07:23:18] 2025-11-25 12:22:26,933 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:23:18] 2025-11-25 12:22:26,934 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:23:18] 2025-11-25 12:22:26,934 | INFO     | update_server=False
[2025-11-25 07:23:18] 2025-11-25 12:22:26,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:23:18] 2025-11-25 12:22:26,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:23:18] 2025-11-25 12:22:27,036 | INFO     | all job control threads have been joined
[2025-11-25 07:23:18] 2025-11-25 12:22:27,327 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 07:23:18] 2025-11-25 12:22:27,328 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 07:23:18] 2025-11-25 12:22:27,328 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:23:18] 2025-11-25 12:22:27,328 | INFO     | will abort loop
[2025-11-25 07:23:18] 2025-11-25 12:22:27,524 | INFO     | all payload control threads have been joined
[2025-11-25 07:23:18] 2025-11-25 12:22:27,782 | INFO     | all data control threads have been joined
[2025-11-25 07:23:18] 2025-11-25 12:22:27,939 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:27,940 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:28,042 | INFO     | [job] control thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:28,105 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:28,167 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:28,170 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:28,333 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:28,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:23:18] 2025-11-25 12:22:28,530 | INFO     | [payload] control thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:28,787 | INFO     | [data] control thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:28,907 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:23:18] 2025-11-25 12:22:29,011 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:29,170 | INFO     | [job] validate thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:29,211 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:29,307 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:29,327 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:30,430 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:32,913 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:23:18] 2025-11-25 12:22:57,717 | INFO     | PID=3071984 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 07:23:18] 2025-11-25 12:22:57,717 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:23:18] 2025-11-25 12:22:57,718 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:23:18] 2025-11-25 12:22:57,718 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:23:18] 2025-11-25 12:23:12,277 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:23:18] 2025-11-25 12:23:13,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140178884572992)>', '<ExcThread(monitor, started 140178060470016)>']
[2025-11-25 07:23:18] 2025-11-25 12:23:13,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:23:18] 2025-11-25 12:23:13,796 | INFO     | [monitor] control thread has ended
[2025-11-25 07:23:18] 2025-11-25 12:23:18,663 | INFO     | all workflow threads have been joined
[2025-11-25 07:23:18] 2025-11-25 12:23:18,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:23:18] 2025-11-25 12:23:18,664 | INFO     | traces error code: 0
[2025-11-25 07:23:18] 2025-11-25 12:23:18,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:23:18] 2025-11-25 12:23:18,821 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:23:18] 2025-11-25 12:23:18,823 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:23:18] 2025-11-25 12:23:18,825 [wrapper] pilotpid: 3071984
[2025-11-25 07:23:18] 2025-11-25 12:23:18,827 [wrapper] Pilot exit status: 0
[2025-11-25 07:23:18] 2025-11-25 12:23:18,836 [wrapper] pandaids: 6895475917
[2025-11-25 07:23:18] 2025-11-25 12:23:18,886 [wrapper] cleanup supervisor_pilot 3468602 3071985
[2025-11-25 07:23:18] 2025-11-25 12:23:18,889 [wrapper] Test setup, not cleaning
[2025-11-25 07:23:18] 2025-11-25 12:23:18,891 [wrapper] apfmon messages muted
[2025-11-25 07:23:18] 2025-11-25 12:23:18,892 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:23:18] 2025-11-25 12:23:18,895 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:23:18]  *** Error codes and diagnostics ***
[2025-11-25 07:23:18]     "exeErrorCode": 0,
[2025-11-25 07:23:18]     "exeErrorDiag": "",
[2025-11-25 07:23:18]     "pilotErrorCode": 0,
[2025-11-25 07:23:18]     "pilotErrorDiag": "",
[2025-11-25 07:23:18]  *** Listing of results directory ***
[2025-11-25 07:23:18] total 1293312
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc    576529 Nov 24 04:01 pilot3.tar.gz
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc      5112 Nov 24 04:11 queuedata.json
[2025-11-25 07:23:18] -rwx------ 1 boinc boinc     36292 Nov 24 04:12 runpilot2-wrapper.sh
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc       100 Nov 25 02:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:23:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 02:40 run_atlas
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc       105 Nov 25 02:40 job.xml
[2025-11-25 07:23:18] -rw-r--r-- 2 boinc boinc 406979892 Nov 25 02:40 EVNT.47483658._001292.pool.root.1
[2025-11-25 07:23:18] drwxrwx--x 1 boinc boinc        76 Nov 25 02:40 shared
[2025-11-25 07:23:18] -rw-r--r-- 2 boinc boinc    590108 Nov 25 02:40 input.tar.gz
[2025-11-25 07:23:18] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:40 start_atlas.sh
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc         0 Nov 25 02:40 boinc_setup_complete
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc         0 Nov 25 02:40 boinc_lockfile
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc      2785 Nov 25 02:40 pandaJob.out
[2025-11-25 07:23:18] -rw------- 1 boinc boinc    991830 Nov 25 02:40 agis_schedconf.cvmfs.json
[2025-11-25 07:23:18] drwx------ 1 boinc boinc       414 Nov 25 02:40 pilot3
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc      9267 Nov 25 04:41 init_data.xml
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc       532 Nov 25 07:12 boinc_task_state.xml
[2025-11-25 07:23:18] -rw------- 1 boinc boinc 904636898 Nov 25 07:21 HITS.47556149._002789.pool.root.1
[2025-11-25 07:23:18] -rw------- 1 boinc boinc        95 Nov 25 07:22 pilot_heartbeat.json
[2025-11-25 07:23:18] -rw------- 1 boinc boinc      1051 Nov 25 07:22 memory_monitor_summary.json
[2025-11-25 07:23:18] -rw------- 1 boinc boinc   1516240 Nov 25 07:22 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:23:18] -rw------- 1 boinc boinc   2067540 Nov 25 07:22 log.47556149._002789.job.log.tgz.1
[2025-11-25 07:23:18] -rw------- 1 boinc boinc      8638 Nov 25 07:22 heartbeat.json
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc      8192 Nov 25 07:23 boinc_mmap_file
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc        29 Nov 25 07:23 wrapper_checkpoint.txt
[2025-11-25 07:23:18] -rw------- 1 boinc boinc      4935 Nov 25 07:23 pilotlog.txt
[2025-11-25 07:23:18] -rw------- 1 boinc boinc   2349350 Nov 25 07:23 log.47556149._002789.job.log.1
[2025-11-25 07:23:18] -rw------- 1 boinc boinc       353 Nov 25 07:23 output.list
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc       620 Nov 25 07:23 runtime_log
[2025-11-25 07:23:18] -rw------- 1 boinc boinc   4433920 Nov 25 07:23 result.tar.gz
[2025-11-25 07:23:18] -rw------- 1 boinc boinc       681 Nov 25 07:23 sJoMDmInhh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzZLKDmg7ZAfn.diag
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc      8905 Nov 25 07:23 runtime_log.err
[2025-11-25 07:23:18] -rw-r--r-- 1 boinc boinc     21653 Nov 25 07:23 stderr.txt
[2025-11-25 07:23:18] HITS file was successfully produced:
[2025-11-25 07:23:19] -rw------- 1 boinc boinc 904636898 Nov 25 07:21 shared/HITS.pool.root.1
[2025-11-25 07:23:19]  *** Contents of shared directory: ***
[2025-11-25 07:23:19] total 1285808
[2025-11-25 07:23:19] -rw-r--r-- 2 boinc boinc 406979892 Nov 25 02:40 ATLAS.root_0
[2025-11-25 07:23:19] -rw-r--r-- 2 boinc boinc    590108 Nov 25 02:40 input.tar.gz
[2025-11-25 07:23:19] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:40 start_atlas.sh
[2025-11-25 07:23:19] -rw------- 1 boinc boinc 904636898 Nov 25 07:21 HITS.pool.root.1
[2025-11-25 07:23:19] -rw------- 1 boinc boinc   4433920 Nov 25 07:23 result.tar.gz
07:23:20 (3067202): run_atlas exited; CPU time 184267.819519
07:23:20 (3067202): called boinc_finish(0)

</stderr_txt>
]]>

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