Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:05:47 (2826198): wrapper (7.7.26015): starting
16:05:47 (2826198): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 16:05:47] Arguments: --nthreads 4
[2025-11-25 16:05:47] Threads: 4
[2025-11-25 16:05:47] Checking for CVMFS
[2025-11-25 16:05:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 16:05:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 16:05:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 16:05:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 16:05:47] 2.12.7.0 1658315 7287 92668 153285 3 81 2113120 4097025 0 130560 0 2704560 99.980 236261 17190 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 16:05:47] CVMFS is ok
[2025-11-25 16:05:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 16:05:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 16:05:48] Further information can be found at the LHC@home message board.
[2025-11-25 16:05:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 16:05:48] Checking for apptainer binary...
[2025-11-25 16:05:48] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-25 16:05:48] apptainer is not installed, using version from CVMFS
[2025-11-25 16:05:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 16:05:48] pckeatlas05
[2025-11-25 16:05:48] apptainer works
[2025-11-25 16:05:48] Set ATHENA_PROC_NUMBER=4
[2025-11-25 16:05:48] Set ATHENA_CORE_NUMBER=4
[2025-11-25 16:05:48] Starting ATLAS job with PandaID=6895373262
[2025-11-25 16:05:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 05:34:41]  *** The last 200 lines of the pilot log: ***
[2025-11-26 05:34:41] 2025-11-26 04:34:06,030 | INFO     | time since job start (48493s) is within the limit (172800.0s)
[2025-11-26 05:34:41] 2025-11-26 04:34:06,489 | INFO     | monitor loop #3666: job 0:6895373262 is in state 'finished'
[2025-11-26 05:34:41] 2025-11-26 04:34:06,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 05:34:41] 2025-11-26 04:34:08,036 | INFO     | time since job start (48495s) is within the limit (172800.0s)
[2025-11-26 05:34:41] 2025-11-26 04:34:08,618 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 05:34:41] 2025-11-26 04:34:08,619 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3814.85475
[2025-11-26 05:34:41] 2025-11-26 04:34:08,619 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6895373262/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 05:34:41] 2025-11-26 04:34:08,620 | INFO     | extracted standard info from prmon json
[2025-11-26 05:34:41] 2025-11-26 04:34:08,620 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 05:34:41] 2025-11-26 04:34:08,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 05:34:41] 2025-11-26 04:34:08,627 | INFO     | fitting pss+swap vs Time
[2025-11-26 05:34:41] 2025-11-26 04:34:08,627 | INFO     | sum of square deviations: 155804186390.0
[2025-11-26 05:34:41] 2025-11-26 04:34:08,635 | INFO     | sum of deviations: 652075222383.9999
[2025-11-26 05:34:41] 2025-11-26 04:34:08,635 | INFO     | mean x: 1764107390.0
[2025-11-26 05:34:41] 2025-11-26 04:34:08,635 | INFO     | mean y: 2410680.6012578616
[2025-11-26 05:34:41] 2025-11-26 04:34:08,635 | INFO     | intersect: -7380771667.041612
[2025-11-26 05:34:41] 2025-11-26 04:34:08,636 | INFO     | chi2: 2.4538912964970803
[2025-11-26 05:34:41] 2025-11-26 04:34:08,636 | INFO     | sum of square deviations: 152882931617.5
[2025-11-26 05:34:41] 2025-11-26 04:34:08,644 | INFO     | sum of deviations: 752295716778.5002
[2025-11-26 05:34:41] 2025-11-26 04:34:08,644 | INFO     | mean x: 1764107237.5
[2025-11-26 05:34:41] 2025-11-26 04:34:08,644 | INFO     | mean y: 2415899.682278481
[2025-11-26 05:34:41] 2025-11-26 04:34:08,644 | INFO     | intersect: -8678280530.378136
[2025-11-26 05:34:41] 2025-11-26 04:34:08,645 | INFO     | chi2: 1.4596788878661668
[2025-11-26 05:34:41] 2025-11-26 04:34:08,645 | INFO     | current chi2=1.4596788878661668 (change=40.515747785981695 %)
[2025-11-26 05:34:41] 2025-11-26 04:34:08,645 | INFO     | sum of square deviations: 149998421720.0
[2025-11-26 05:34:41] 2025-11-26 04:34:08,652 | INFO     | sum of deviations: 744009174615.0001
[2025-11-26 05:34:41] 2025-11-26 04:34:08,653 | INFO     | mean x: 1764107085.0
[2025-11-26 05:34:41] 2025-11-26 04:34:08,653 | INFO     | mean y: 2415461.6012738855
[2025-11-26 05:34:41] 2025-11-26 04:34:08,653 | INFO     | intersect: -8747755648.154612
[2025-11-26 05:34:41] 2025-11-26 04:34:08,653 | INFO     | chi2: 1.4581081983287356
[2025-11-26 05:34:41] 2025-11-26 04:34:08,653 | INFO     | current chi2=1.4581081983287356 (change=0.10760514182179745 %)
[2025-11-26 05:34:41] 2025-11-26 04:34:08,653 | INFO     | right removable region: 784
[2025-11-26 05:34:41] 2025-11-26 04:34:08,654 | INFO     | sum of square deviations: 152882931617.5
[2025-11-26 05:34:41] 2025-11-26 04:34:08,661 | INFO     | sum of deviations: 541955130770.5001
[2025-11-26 05:34:41] 2025-11-26 04:34:08,661 | INFO     | mean x: 1764107542.5
[2025-11-26 05:34:41] 2025-11-26 04:34:08,661 | INFO     | mean y: 2416414.7556962026
[2025-11-26 05:34:41] 2025-11-26 04:34:08,661 | INFO     | intersect: -6251173333.776934
[2025-11-26 05:34:41] 2025-11-26 04:34:08,662 | INFO     | chi2: 1.2502893097693821
[2025-11-26 05:34:41] 2025-11-26 04:34:08,662 | INFO     | current chi2=1.2502893097693821 (change=49.04870841042695 %)
[2025-11-26 05:34:41] 2025-11-26 04:34:08,662 | INFO     | sum of square deviations: 149998421720.0
[2025-11-26 05:34:41] 2025-11-26 04:34:08,670 | INFO     | sum of deviations: 507902482687.9998
[2025-11-26 05:34:41] 2025-11-26 04:34:08,670 | INFO     | mean x: 1764107695.0
[2025-11-26 05:34:41] 2025-11-26 04:34:08,670 | INFO     | mean y: 2418214.677707006
[2025-11-26 05:34:41] 2025-11-26 04:34:08,670 | INFO     | intersect: -5970942489.690542
[2025-11-26 05:34:41] 2025-11-26 04:34:08,670 | INFO     | chi2: 1.2152384548090907
[2025-11-26 05:34:41] 2025-11-26 04:34:08,671 | INFO     | current chi2=1.2152384548090907 (change=2.8034195514921794 %)
[2025-11-26 05:34:41] 2025-11-26 04:34:08,671 | INFO     | left removable region: 20
[2025-11-26 05:34:41] 2025-11-26 04:34:08,671 | INFO     | sum of square deviations: 138279485715.0
[2025-11-26 05:34:41] 2025-11-26 04:34:08,678 | INFO     | sum of deviations: 535951805400.5001
[2025-11-26 05:34:41] 2025-11-26 04:34:08,678 | INFO     | mean x: 1764107664.5
[2025-11-26 05:34:41] 2025-11-26 04:34:08,678 | INFO     | mean y: 2426577.320680628
[2025-11-26 05:34:41] 2025-11-26 04:34:08,678 | INFO     | intersect: -6835006197.4750185
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | chi2: 0.16267774311601554
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | current memory leak: 3.88 B/s (using 764 data points, chi2=0.16)
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | could have reported an average CPU frequency of 3708 MHz (30 samples)
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | ..............................
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | . Timing measurements:
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | . get job = 0 s
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | . initial setup = 0 s
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | . payload setup = 3 s
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | . stage-in = 0 s
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | . payload execution = 48469 s
[2025-11-26 05:34:41] 2025-11-26 04:34:08,679 | INFO     | . stage-out = 0 s
[2025-11-26 05:34:41] 2025-11-26 04:34:08,680 | INFO     | . log creation = 0 s
[2025-11-26 05:34:41] 2025-11-26 04:34:08,680 | INFO     | ..............................
[2025-11-26 05:34:41] 2025-11-26 04:34:09,145 | INFO     | 
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | job summary report
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | --------------------------------------------------
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | PanDA job id: 6895373262
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | task id: 47556137
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | errors: (none)
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | pilot state: finished 
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | transexitcode: 0
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | exeerrorcode: 0
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | exeerrordiag: 
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | exitcode: 0
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | exitmsg: OK
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | cpuconsumptiontime: 191117 s
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | nevents: 1000
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | neventsw: 0
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | pid: 2837038
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | pgrp: 2837038
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | corecount: 4
[2025-11-26 05:34:41] 2025-11-26 04:34:09,146 | INFO     | event service: False
[2025-11-26 05:34:41] 2025-11-26 04:34:09,147 | INFO     | sizes: {0: 2284315, 2: 2284577, 11: 2284605, 48476: 2332950, 48477: 2341944, 48478: 2342000, 48482: 2342374}
[2025-11-26 05:34:41] 2025-11-26 04:34:09,147 | INFO     | --------------------------------------------------
[2025-11-26 05:34:41] 2025-11-26 04:34:09,147 | INFO     | 
[2025-11-26 05:34:41] 2025-11-26 04:34:09,147 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-26 05:34:41] 2025-11-26 04:34:09,156 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 05:34:41] 2025-11-26 04:34:09,157 | INFO     | job 6895373262 has completed (purged errors)
[2025-11-26 05:34:41] 2025-11-26 04:34:09,158 | INFO     | overall cleanup function is called
[2025-11-26 05:34:41] 2025-11-26 04:34:10,167 | INFO     | --- collectZombieJob: --- 10, [2837038]
[2025-11-26 05:34:41] 2025-11-26 04:34:10,167 | INFO     | zombie collector waiting for pid 2837038
[2025-11-26 05:34:41] 2025-11-26 04:34:10,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 05:34:41] 2025-11-26 04:34:10,167 | INFO     | collected zombie processes
[2025-11-26 05:34:41] 2025-11-26 04:34:10,167 | INFO     | will attempt to kill all subprocesses of pid=2837038
[2025-11-26 05:34:41] 2025-11-26 04:34:10,209 | INFO     | process IDs to be killed: [2837038] (in reverse order)
[2025-11-26 05:34:41] 2025-11-26 04:34:10,228 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 05:34:41] 2025-11-26 04:34:10,228 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 05:34:41] 2025-11-26 04:34:10,230 | INFO     | did not find any defunct processes belonging to 2837038
[2025-11-26 05:34:41] 2025-11-26 04:34:10,231 | INFO     | did not find any defunct processes belonging to 2837038
[2025-11-26 05:34:41] 2025-11-26 04:34:10,231 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 05:34:41] 2025-11-26 04:34:10,231 | INFO     | ready for new job
[2025-11-26 05:34:41] 2025-11-26 04:34:10,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 05:34:41] 2025-11-26 04:34:10,233 | INFO     | ***************************************
[2025-11-26 05:34:41] 2025-11-26 04:34:10,233 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 05:34:41] 2025-11-26 04:34:10,233 | INFO     | ***************************************
[2025-11-26 05:34:41] 2025-11-26 04:34:10,233 | INFO     | 
[2025-11-26 05:34:41] 2025-11-26 04:34:10,233 | INFO     | architecture information:
[2025-11-26 05:34:41] 2025-11-26 04:34:10,233 | INFO     | executing command: cat /etc/os-release
[2025-11-26 05:34:41] 2025-11-26 04:34:10,239 | INFO     | cat /etc/os-release:
[2025-11-26 05:34:41] NAME="CentOS Linux"
[2025-11-26 05:34:41] VERSION="7 (Core)"
[2025-11-26 05:34:41] ID="centos"
[2025-11-26 05:34:41] ID_LIKE="rhel fedora"
[2025-11-26 05:34:41] VERSION_ID="7"
[2025-11-26 05:34:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 05:34:41] ANSI_COLOR="0;31"
[2025-11-26 05:34:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 05:34:41] HOME_URL="https://www.centos.org/"
[2025-11-26 05:34:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 05:34:41] 
[2025-11-26 05:34:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 05:34:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 05:34:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 05:34:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 05:34:41] 
[2025-11-26 05:34:41] 2025-11-26 04:34:10,239 | INFO     | ***************************************
[2025-11-26 05:34:41] 2025-11-26 04:34:10,742 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-26 05:34:41] 2025-11-26 04:34:10,749 | INFO     | sufficient remaining disk space (45973766144 B)
[2025-11-26 05:34:41] 2025-11-26 04:34:10,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 05:34:41] 2025-11-26 04:34:10,750 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 05:34:41] 2025-11-26 04:34:10,750 | INFO     | update_server=False
[2025-11-26 05:34:41] 2025-11-26 04:34:10,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 05:34:41] 2025-11-26 04:34:10,750 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:34:41] 2025-11-26 04:34:10,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 05:34:41] 2025-11-26 04:34:10,750 | INFO     | aborting loop
[2025-11-26 05:34:41] 2025-11-26 04:34:11,546 | INFO     | all data control threads have been joined
[2025-11-26 05:34:41] 2025-11-26 04:34:11,721 | INFO     | all job control threads have been joined
[2025-11-26 05:34:41] 2025-11-26 04:34:11,755 | INFO     | [job] retrieve thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:11,755 | INFO     | [job] job monitor thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:11,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 05:34:41] 2025-11-26 04:34:11,995 | INFO     | [payload] validate_post thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:12,001 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:12,251 | INFO     | all payload control threads have been joined
[2025-11-26 05:34:41] 2025-11-26 04:34:12,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:12,365 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:12,470 | INFO     | [data] copytool_in thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:12,551 | INFO     | [data] control thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:12,726 | INFO     | [job] control thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:12,779 | INFO     | [payload] failed_post thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:13,077 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:13,113 | INFO     | [job] validate thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:13,256 | INFO     | [payload] control thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:13,610 | INFO     | [monitor] cgroup control has ended
[2025-11-26 05:34:41] 2025-11-26 04:34:13,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 05:34:41] 2025-11-26 04:34:13,987 | INFO     | [data] copytool_out thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:14,740 | INFO     | [job] queue monitor thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:14,756 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 05:34:41] 2025-11-26 04:34:15,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044475610944)>', '<ExcThread(monitor, started 140043716916992)>']
[2025-11-26 05:34:41] 2025-11-26 04:34:20,652 | INFO     | all workflow threads have been joined
[2025-11-26 05:34:41] 2025-11-26 04:34:20,653 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 05:34:41] 2025-11-26 04:34:20,653 | INFO     | traces error code: 0
[2025-11-26 05:34:41] 2025-11-26 04:34:20,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 05:34:41] 2025-11-26 04:34:41,159 | INFO     | PID=2829860 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 05:34:41] 2025-11-26 04:34:41,160 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 05:34:41] 2025-11-26 04:34:41,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 05:34:41] 2025-11-26 04:34:41,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 05:34:41] 2025-11-26 04:34:41,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 05:34:41] 2025-11-26 04:34:41,160 | INFO     | [monitor] control thread has ended
[2025-11-26 05:34:41] 2025-11-26 04:34:41,217 [wrapper] ==== pilot stdout END ====
[2025-11-26 05:34:41] 2025-11-26 04:34:41,219 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 05:34:41] 2025-11-26 04:34:41,220 [wrapper] pilotpid: 2829860
[2025-11-26 05:34:41] 2025-11-26 04:34:41,221 [wrapper] Pilot exit status: 0
[2025-11-26 05:34:41] 2025-11-26 04:34:41,226 [wrapper] pandaids: 6895373262
[2025-11-26 05:34:41] 2025-11-26 04:34:41,236 [wrapper] cleanup supervisor_pilot 2951839 2829861
[2025-11-26 05:34:41] 2025-11-26 04:34:41,238 [wrapper] Test setup, not cleaning
[2025-11-26 05:34:41] 2025-11-26 04:34:41,239 [wrapper] apfmon messages muted
[2025-11-26 05:34:41] 2025-11-26 04:34:41,240 [wrapper] ==== wrapper stdout END ====
[2025-11-26 05:34:41] 2025-11-26 04:34:41,241 [wrapper] ==== wrapper stderr END ====
[2025-11-26 05:34:41]  *** Error codes and diagnostics ***
[2025-11-26 05:34:41]     "exeErrorCode": 0,
[2025-11-26 05:34:41]     "exeErrorDiag": "",
[2025-11-26 05:34:41]     "pilotErrorCode": 0,
[2025-11-26 05:34:41]     "pilotErrorDiag": "",
[2025-11-26 05:34:41]  *** Listing of results directory ***
[2025-11-26 05:34:41] total 1312484
[2025-11-26 05:34:41] -rwx------ 1 boinc boinc     36292 Nov 23 23:35 runpilot2-wrapper.sh
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc      5112 Nov 23 23:35 queuedata.json
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc    576529 Nov 23 23:35 pilot3.tar.gz
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc       100 Nov 25 16:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 05:34:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 16:05 run_atlas
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc       105 Nov 25 16:05 job.xml
[2025-11-26 05:34:41] -rw-r--r-- 2 boinc boinc     15847 Nov 25 16:05 start_atlas.sh
[2025-11-26 05:34:41] drwxrwx--x 2 boinc boinc        68 Nov 25 16:05 shared
[2025-11-26 05:34:41] -rw-r--r-- 2 boinc boinc    590090 Nov 25 16:05 input.tar.gz
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc      6313 Nov 25 16:05 init_data.xml
[2025-11-26 05:34:41] -rw-r--r-- 2 boinc boinc 406689523 Nov 25 16:05 EVNT.47483658._000924.pool.root.1
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc         0 Nov 25 16:05 boinc_lockfile
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc      2786 Nov 25 16:05 pandaJob.out
[2025-11-26 05:34:41] -rw------- 1 boinc boinc    991909 Nov 25 16:05 agis_schedconf.cvmfs.json
[2025-11-26 05:34:41] drwx------ 5 boinc boinc      4096 Nov 25 16:05 pilot3
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc       532 Nov 26 05:28 boinc_task_state.xml
[2025-11-26 05:34:41] -rw------- 1 boinc boinc 916759136 Nov 26 05:33 HITS.47556137._009105.pool.root.1
[2025-11-26 05:34:41] -rw------- 1 boinc boinc      1025 Nov 26 05:33 memory_monitor_summary.json
[2025-11-26 05:34:41] -rw------- 1 boinc boinc   1516240 Nov 26 05:34 agis_ddmendpoints.agis.ALL.json
[2025-11-26 05:34:41] -rw------- 1 boinc boinc   1529296 Nov 26 05:34 log.47556137._009105.job.log.tgz.1
[2025-11-26 05:34:41] -rw------- 1 boinc boinc      8580 Nov 26 05:34 heartbeat.json
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc      8192 Nov 26 05:34 boinc_mmap_file
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc        29 Nov 26 05:34 wrapper_checkpoint.txt
[2025-11-26 05:34:41] -rw------- 1 boinc boinc       747 Nov 26 05:34 pilotlog.txt
[2025-11-26 05:34:41] -rw------- 1 boinc boinc        95 Nov 26 05:34 pilot_heartbeat.json
[2025-11-26 05:34:41] -rw------- 1 boinc boinc   6784203 Nov 26 05:34 log.47556137._009105.job.log.1
[2025-11-26 05:34:41] -rw------- 1 boinc boinc       353 Nov 26 05:34 output.list
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc       620 Nov 26 05:34 runtime_log
[2025-11-26 05:34:41] -rw------- 1 boinc boinc   8335360 Nov 26 05:34 result.tar.gz
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc      8831 Nov 26 05:34 runtime_log.err
[2025-11-26 05:34:41] -rw------- 1 boinc boinc       658 Nov 26 05:34 4hWNDmSrXh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTFLKDmkMoJ5m.diag
[2025-11-26 05:34:41] -rw-r--r-- 1 boinc boinc     21372 Nov 26 05:34 stderr.txt
[2025-11-26 05:34:41] HITS file was successfully produced:
[2025-11-26 05:34:41] -rw------- 1 boinc boinc 916759136 Nov 26 05:33 shared/HITS.pool.root.1
[2025-11-26 05:34:41]  *** Contents of shared directory: ***
[2025-11-26 05:34:41] total 1301172
[2025-11-26 05:34:41] -rw-r--r-- 2 boinc boinc     15847 Nov 25 16:05 start_atlas.sh
[2025-11-26 05:34:41] -rw-r--r-- 2 boinc boinc    590090 Nov 25 16:05 input.tar.gz
[2025-11-26 05:34:41] -rw-r--r-- 2 boinc boinc 406689523 Nov 25 16:05 ATLAS.root_0
[2025-11-26 05:34:41] -rw------- 1 boinc boinc 916759136 Nov 26 05:33 HITS.pool.root.1
[2025-11-26 05:34:41] -rw------- 1 boinc boinc   8335360 Nov 26 05:34 result.tar.gz
05:34:42 (2826198): run_atlas exited; CPU time 191279.877829
05:34:42 (2826198): called boinc_finish(0)

</stderr_txt>
]]>

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