Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:29:14 (28771): wrapper (7.7.26015): starting
02:29:14 (28771): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 02:29:14] Arguments: --nthreads 8
[2025-11-25 02:29:14] Threads: 8
[2025-11-25 02:29:14] Checking for CVMFS
[2025-11-25 02:29:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:29:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:29:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:29:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:29:15] 2.11.2.0 2857 65897 88116 153275 2 82 17445715 20275200 1 130560 0 17461392 99.851 3738327 29569 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 02:29:15] CVMFS is ok
[2025-11-25 02:29:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 02:29:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 02:29:15] Further information can be found at the LHC@home message board.
[2025-11-25 02:29:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:29:15] Checking for apptainer binary...
[2025-11-25 02:29:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:29:15] Running /usr/bin/apptainer --version
[2025-11-25 02:29:15] apptainer version 1.3.2-1.el7
[2025-11-25 02:29:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:29:16] c-204-10.aglt2.org
[2025-11-25 02:29:16] apptainer works
[2025-11-25 02:29:16] Set ATHENA_PROC_NUMBER=8
[2025-11-25 02:29:16] Set ATHENA_CORE_NUMBER=8
[2025-11-25 02:29:16] Starting ATLAS job with PandaID=6895374035
[2025-11-25 02:29:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:15:56]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:15:56] 2025-11-25 20:15:03,951 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 15:15:56] 2025-11-25 20:15:03,954 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-25 15:15:56] 2025-11-25 20:15:03,956 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895374035/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:15:56] 2025-11-25 20:15:03,957 | INFO     | extracted standard info from prmon json
[2025-11-25 15:15:56] 2025-11-25 20:15:03,957 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:15:56] 2025-11-25 20:15:03,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:15:56] 2025-11-25 20:15:03,970 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:15:56] 2025-11-25 20:15:03,971 | INFO     | sum of square deviations: 132391763644.5762
[2025-11-25 15:15:56] 2025-11-25 20:15:03,983 | INFO     | sum of deviations: 738571990722.7825
[2025-11-25 15:15:56] 2025-11-25 20:15:03,983 | INFO     | mean x: 1764078742.5471447
[2025-11-25 15:15:56] 2025-11-25 20:15:03,983 | INFO     | mean y: 2874000.4568393095
[2025-11-25 15:15:56] 2025-11-25 20:15:03,984 | INFO     | intersect: -9838366215.75932
[2025-11-25 15:15:56] 2025-11-25 20:15:03,984 | INFO     | chi2: 6.486577450551548
[2025-11-25 15:15:56] 2025-11-25 20:15:03,985 | INFO     | sum of square deviations: 129772063438.06952
[2025-11-25 15:15:56] 2025-11-25 20:15:03,997 | INFO     | sum of deviations: 1006584076179.9325
[2025-11-25 15:15:56] 2025-11-25 20:15:03,997 | INFO     | mean x: 1764078590.0508022
[2025-11-25 15:15:56] 2025-11-25 20:15:03,997 | INFO     | mean y: 2889603.028074866
[2025-11-25 15:15:56] 2025-11-25 20:15:03,997 | INFO     | intersect: -13680282035.2382
[2025-11-25 15:15:56] 2025-11-25 20:15:03,998 | INFO     | chi2: 3.001324664747797
[2025-11-25 15:15:56] 2025-11-25 20:15:03,998 | INFO     | current chi2=3.001324664747797 (change=53.730226955162664 %)
[2025-11-25 15:15:56] 2025-11-25 20:15:03,999 | INFO     | sum of square deviations: 127187154581.54262
[2025-11-25 15:15:56] 2025-11-25 20:15:04,010 | INFO     | sum of deviations: 1094350785221.7932
[2025-11-25 15:15:56] 2025-11-25 20:15:04,010 | INFO     | mean x: 1764078437.5545087
[2025-11-25 15:15:56] 2025-11-25 20:15:04,011 | INFO     | mean y: 2894773.017496635
[2025-11-25 15:15:56] 2025-11-25 20:15:04,011 | INFO     | intersect: -15175686976.705584
[2025-11-25 15:15:56] 2025-11-25 20:15:04,012 | INFO     | chi2: 2.471381706253004
[2025-11-25 15:15:56] 2025-11-25 20:15:04,012 | INFO     | current chi2=2.471381706253004 (change=17.656968761802528 %)
[2025-11-25 15:15:56] 2025-11-25 20:15:04,012 | INFO     | right removable region: 742
[2025-11-25 15:15:56] 2025-11-25 20:15:04,013 | INFO     | sum of square deviations: 129771812118.06943
[2025-11-25 15:15:56] 2025-11-25 20:15:04,024 | INFO     | sum of deviations: 532651785051.2894
[2025-11-25 15:15:56] 2025-11-25 20:15:04,024 | INFO     | mean x: 1764078895.0508022
[2025-11-25 15:15:56] 2025-11-25 20:15:04,024 | INFO     | mean y: 2885966.0187165774
[2025-11-25 15:15:56] 2025-11-25 20:15:04,025 | INFO     | intersect: -7237821835.496839
[2025-11-25 15:15:56] 2025-11-25 20:15:04,025 | INFO     | chi2: 4.1892792844945
[2025-11-25 15:15:56] 2025-11-25 20:15:04,025 | INFO     | current chi2=4.1892792844945 (change=35.41618339671116 %)
[2025-11-25 15:15:56] 2025-11-25 20:15:04,026 | INFO     | sum of square deviations: 127186697569.65001
[2025-11-25 15:15:56] 2025-11-25 20:15:04,038 | INFO     | sum of deviations: 488841804752.8161
[2025-11-25 15:15:56] 2025-11-25 20:15:04,038 | INFO     | mean x: 1764079047.5531628
[2025-11-25 15:15:56] 2025-11-25 20:15:04,038 | INFO     | mean y: 2888549.333781965
[2025-11-25 15:15:56] 2025-11-25 20:15:04,038 | INFO     | monitor loop #3383: job 0:6895374035 is in state 'finished'
[2025-11-25 15:15:56] 2025-11-25 20:15:04,038 | INFO     | intersect: -6777345561.708166
[2025-11-25 15:15:56] 2025-11-25 20:15:04,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:15:56] 2025-11-25 20:15:04,039 | INFO     | chi2: 4.143319843662809
[2025-11-25 15:15:56] 2025-11-25 20:15:04,040 | INFO     | current chi2=4.143319843662809 (change=1.0970727352028695 %)
[2025-11-25 15:15:56] 2025-11-25 20:15:04,040 | INFO     | left removable region: 20
[2025-11-25 15:15:56] 2025-11-25 20:15:04,041 | INFO     | sum of square deviations: 116704384393.9402
[2025-11-25 15:15:56] 2025-11-25 20:15:04,052 | INFO     | sum of deviations: 792583634044.5182
[2025-11-25 15:15:56] 2025-11-25 20:15:04,052 | INFO     | mean x: 1764079017.0650969
[2025-11-25 15:15:56] 2025-11-25 20:15:04,052 | INFO     | mean y: 2913099.4570637117
[2025-11-25 15:15:56] 2025-11-25 20:15:04,052 | INFO     | intersect: -11977615013.073177
[2025-11-25 15:15:56] 2025-11-25 20:15:04,053 | INFO     | chi2: 0.08089806699639356
[2025-11-25 15:15:56] 2025-11-25 20:15:04,053 | INFO     | current memory leak: 6.79 B/s (using 722 data points, chi2=0.08)
[2025-11-25 15:15:56] 2025-11-25 20:15:04,053 | INFO     | could have reported an average CPU frequency of 2157 MHz (29 samples)
[2025-11-25 15:15:56] 2025-11-25 20:15:04,054 | INFO     | ..............................
[2025-11-25 15:15:56] 2025-11-25 20:15:04,054 | INFO     | . Timing measurements:
[2025-11-25 15:15:56] 2025-11-25 20:15:04,054 | INFO     | . get job = 0 s
[2025-11-25 15:15:56] 2025-11-25 20:15:04,054 | INFO     | . initial setup = 2 s
[2025-11-25 15:15:56] 2025-11-25 20:15:04,054 | INFO     | . payload setup = 9 s
[2025-11-25 15:15:56] 2025-11-25 20:15:04,054 | INFO     | . stage-in = 0 s
[2025-11-25 15:15:56] 2025-11-25 20:15:04,054 | INFO     | . payload execution = 45888 s
[2025-11-25 15:15:56] 2025-11-25 20:15:04,055 | INFO     | . stage-out = 3 s
[2025-11-25 15:15:56] 2025-11-25 20:15:04,055 | INFO     | . log creation = 0 s
[2025-11-25 15:15:56] 2025-11-25 20:15:04,055 | INFO     | ..............................
[2025-11-25 15:15:56] 2025-11-25 20:15:04,567 | INFO     | 
[2025-11-25 15:15:56] 2025-11-25 20:15:04,567 | INFO     | job summary report
[2025-11-25 15:15:56] 2025-11-25 20:15:04,567 | INFO     | --------------------------------------------------
[2025-11-25 15:15:56] 2025-11-25 20:15:04,568 | INFO     | PanDA job id: 6895374035
[2025-11-25 15:15:56] 2025-11-25 20:15:04,568 | INFO     | task id: 47556137
[2025-11-25 15:15:56] 2025-11-25 20:15:04,568 | INFO     | errors: (none)
[2025-11-25 15:15:56] 2025-11-25 20:15:04,568 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:15:56] 2025-11-25 20:15:04,568 | INFO     | pilot state: finished 
[2025-11-25 15:15:56] 2025-11-25 20:15:04,568 | INFO     | transexitcode: 0
[2025-11-25 15:15:56] 2025-11-25 20:15:04,569 | INFO     | exeerrorcode: 0
[2025-11-25 15:15:56] 2025-11-25 20:15:04,569 | INFO     | exeerrordiag: 
[2025-11-25 15:15:56] 2025-11-25 20:15:04,569 | INFO     | exitcode: 0
[2025-11-25 15:15:56] 2025-11-25 20:15:04,569 | INFO     | exitmsg: OK
[2025-11-25 15:15:56] 2025-11-25 20:15:04,569 | INFO     | cpuconsumptiontime: 355237 s
[2025-11-25 15:15:56] 2025-11-25 20:15:04,570 | INFO     | nevents: 1000
[2025-11-25 15:15:56] 2025-11-25 20:15:04,570 | INFO     | neventsw: 0
[2025-11-25 15:15:56] 2025-11-25 20:15:04,570 | INFO     | pid: 6556
[2025-11-25 15:15:56] 2025-11-25 20:15:04,570 | INFO     | pgrp: 6556
[2025-11-25 15:15:56] 2025-11-25 20:15:04,570 | INFO     | corecount: 8
[2025-11-25 15:15:56] 2025-11-25 20:15:04,570 | INFO     | event service: False
[2025-11-25 15:15:56] 2025-11-25 20:15:04,570 | INFO     | sizes: {0: 2284259, 6: 2284521, 11: 2284549, 45901: 2330862, 45905: 2339861, 45906: 2339917, 45912: 2340291}
[2025-11-25 15:15:56] 2025-11-25 20:15:04,571 | INFO     | --------------------------------------------------
[2025-11-25 15:15:56] 2025-11-25 20:15:04,571 | INFO     | 
[2025-11-25 15:15:56] 2025-11-25 20:15:04,571 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 15:15:56] 2025-11-25 20:15:04,600 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,601 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,601 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,601 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,605 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:15:56] 2025-11-25 20:15:04,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:15:56] 2025-11-25 20:15:04,605 | INFO     | job 6895374035 has completed (purged errors)
[2025-11-25 15:15:56] 2025-11-25 20:15:04,606 | INFO     | overall cleanup function is called
[2025-11-25 15:15:56] 2025-11-25 20:15:05,622 | INFO     | --- collectZombieJob: --- 10, [6556]
[2025-11-25 15:15:56] 2025-11-25 20:15:05,622 | INFO     | zombie collector waiting for pid 6556
[2025-11-25 15:15:56] 2025-11-25 20:15:05,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:15:56] 2025-11-25 20:15:05,623 | INFO     | collected zombie processes
[2025-11-25 15:15:56] 2025-11-25 20:15:05,623 | INFO     | will attempt to kill all subprocesses of pid=6556
[2025-11-25 15:15:56] 2025-11-25 20:15:05,717 | INFO     | process IDs to be killed: [6556] (in reverse order)
[2025-11-25 15:15:56] 2025-11-25 20:15:05,778 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:15:56] 2025-11-25 20:15:05,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:15:56] 2025-11-25 20:15:05,783 | INFO     | did not find any defunct processes belonging to 6556
[2025-11-25 15:15:56] 2025-11-25 20:15:05,787 | INFO     | did not find any defunct processes belonging to 6556
[2025-11-25 15:15:56] 2025-11-25 20:15:05,790 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:15:56] 2025-11-25 20:15:05,790 | INFO     | ready for new job
[2025-11-25 15:15:56] 2025-11-25 20:15:05,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:15:56] 2025-11-25 20:15:05,794 | INFO     | ***************************************
[2025-11-25 15:15:56] 2025-11-25 20:15:05,794 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:15:56] 2025-11-25 20:15:05,794 | INFO     | ***************************************
[2025-11-25 15:15:56] 2025-11-25 20:15:05,794 | INFO     | 
[2025-11-25 15:15:56] 2025-11-25 20:15:05,795 | INFO     | architecture information:
[2025-11-25 15:15:56] 2025-11-25 20:15:05,796 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:15:56] 2025-11-25 20:15:05,815 | INFO     | cat /etc/os-release:
[2025-11-25 15:15:56] NAME="CentOS Linux"
[2025-11-25 15:15:56] VERSION="7 (Core)"
[2025-11-25 15:15:56] ID="centos"
[2025-11-25 15:15:56] ID_LIKE="rhel fedora"
[2025-11-25 15:15:56] VERSION_ID="7"
[2025-11-25 15:15:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:15:56] ANSI_COLOR="0;31"
[2025-11-25 15:15:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:15:56] HOME_URL="https://www.centos.org/"
[2025-11-25 15:15:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:15:56] 
[2025-11-25 15:15:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:15:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:15:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:15:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:15:56] 
[2025-11-25 15:15:56] 2025-11-25 20:15:05,815 | INFO     | ***************************************
[2025-11-25 15:15:56] 2025-11-25 20:15:06,318 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 15:15:56] 2025-11-25 20:15:06,341 | INFO     | sufficient remaining disk space (17469276160 B)
[2025-11-25 15:15:56] 2025-11-25 20:15:06,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:15:56] 2025-11-25 20:15:06,342 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:15:56] 2025-11-25 20:15:06,343 | INFO     | update_server=False
[2025-11-25 15:15:56] 2025-11-25 20:15:06,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:15:56] 2025-11-25 20:15:06,465 | INFO     | all data control threads have been joined
[2025-11-25 15:15:56] 2025-11-25 20:15:06,543 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 15:15:56] 2025-11-25 20:15:06,543 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 15:15:56] 2025-11-25 20:15:06,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:15:56] 2025-11-25 20:15:06,544 | INFO     | will abort loop
[2025-11-25 15:15:56] 2025-11-25 20:15:06,665 | INFO     | all job control threads have been joined
[2025-11-25 15:15:56] 2025-11-25 20:15:07,344 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:07,471 | INFO     | [data] control thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:07,510 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:07,549 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:07,666 | INFO     | [job] control thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:07,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:07,820 | INFO     | all payload control threads have been joined
[2025-11-25 15:15:56] 2025-11-25 20:15:07,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:15:56] 2025-11-25 20:15:07,985 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:08,129 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:08,235 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:08,313 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:08,323 | INFO     | [job] validate thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:08,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:15:56] 2025-11-25 20:15:08,720 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:08,825 | INFO     | [payload] control thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:09,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:15:56] 2025-11-25 20:15:09,827 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:10,160 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:12,549 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:15:56] 2025-11-25 20:15:37,050 | INFO     | PID=32457 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 15:15:56] 2025-11-25 20:15:37,050 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:15:56] 2025-11-25 20:15:37,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:15:56] 2025-11-25 20:15:37,051 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:15:56] 2025-11-25 20:15:50,259 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:15:56] 2025-11-25 20:15:50,747 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325882664768)>', '<ExcThread(monitor, started 140325263746816)>']
[2025-11-25 15:15:56] 2025-11-25 20:15:51,111 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:15:56] 2025-11-25 20:15:51,111 | INFO     | [monitor] control thread has ended
[2025-11-25 15:15:56] 2025-11-25 20:15:55,763 | INFO     | all workflow threads have been joined
[2025-11-25 15:15:56] 2025-11-25 20:15:55,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:15:56] 2025-11-25 20:15:55,764 | INFO     | traces error code: 0
[2025-11-25 15:15:56] 2025-11-25 20:15:55,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:15:56] 2025-11-25 20:15:55,881 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:15:56] 2025-11-25 20:15:55,886 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:15:56] 2025-11-25 20:15:55,891 [wrapper] pilotpid: 32457
[2025-11-25 15:15:56] 2025-11-25 20:15:55,895 [wrapper] Pilot exit status: 0
[2025-11-25 15:15:56] 2025-11-25 20:15:55,913 [wrapper] pandaids: 6895374035
[2025-11-25 15:15:56] 2025-11-25 20:15:55,969 [wrapper] cleanup supervisor_pilot 24435 32458
[2025-11-25 15:15:56] 2025-11-25 20:15:55,974 [wrapper] Test setup, not cleaning
[2025-11-25 15:15:56] 2025-11-25 20:15:55,979 [wrapper] apfmon messages muted
[2025-11-25 15:15:56] 2025-11-25 20:15:55,984 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:15:56] 2025-11-25 20:15:55,988 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:15:56]  *** Error codes and diagnostics ***
[2025-11-25 15:15:56]     "exeErrorCode": 0,
[2025-11-25 15:15:56]     "exeErrorDiag": "",
[2025-11-25 15:15:56]     "pilotErrorCode": 0,
[2025-11-25 15:15:56]     "pilotErrorDiag": "",
[2025-11-25 15:15:56]  *** Listing of results directory ***
[2025-11-25 15:15:56] total 1316988
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 17:35 pilot3.tar.gz
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 17:43 queuedata.json
[2025-11-25 15:15:56] -rwx------ 1 boincer umatlas     36292 Nov 23 17:45 runpilot2-wrapper.sh
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas       100 Nov 25 02:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:15:56] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 02:29 run_atlas
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas       105 Nov 25 02:29 job.xml
[2025-11-25 15:15:56] -rw-r--r-- 2 boincer umatlas 409789323 Nov 25 02:29 EVNT.47483658._000933.pool.root.1
[2025-11-25 15:15:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 02:29 start_atlas.sh
[2025-11-25 15:15:56] drwxrwx--x 2 boincer umatlas      4096 Nov 25 02:29 shared
[2025-11-25 15:15:56] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 02:29 input.tar.gz
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas         0 Nov 25 02:29 boinc_lockfile
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 02:29 pandaJob.out
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas        57 Nov 25 02:29 setup.sh.local
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas    991830 Nov 25 02:29 agis_schedconf.cvmfs.json
[2025-11-25 15:15:56] drwx------ 5 boincer umatlas      4096 Nov 25 02:29 pilot3
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas       533 Nov 25 15:02 boinc_task_state.xml
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 15:10 init_data.xml
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas 918254727 Nov 25 15:14 HITS.47556137._009193.pool.root.1
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas      1064 Nov 25 15:14 memory_monitor_summary.json
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas        95 Nov 25 15:14 pilot_heartbeat.json
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas   1516240 Nov 25 15:14 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas   1994591 Nov 25 15:14 log.47556137._009193.job.log.tgz.1
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas      8673 Nov 25 15:15 heartbeat.json
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 15:15 boinc_mmap_file
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas        29 Nov 25 15:15 wrapper_checkpoint.txt
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas      4932 Nov 25 15:15 pilotlog.txt
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas   6323931 Nov 25 15:15 log.47556137._009193.job.log.1
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas       353 Nov 25 15:15 output.list
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas       620 Nov 25 15:15 runtime_log
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas   8335360 Nov 25 15:15 result.tar.gz
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas       668 Nov 25 15:15 V28NDmW0Xh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLoIKDmYZhmwm.diag
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 15:15 runtime_log.err
[2025-11-25 15:15:56] -rw-r--r-- 1 boincer umatlas     21275 Nov 25 15:15 stderr.txt
[2025-11-25 15:15:56] HITS file was successfully produced:
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas 918254727 Nov 25 15:14 shared/HITS.pool.root.1
[2025-11-25 15:15:56]  *** Contents of shared directory: ***
[2025-11-25 15:15:56] total 1305664
[2025-11-25 15:15:56] -rw-r--r-- 2 boincer umatlas 409789323 Nov 25 02:29 ATLAS.root_0
[2025-11-25 15:15:56] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 02:29 start_atlas.sh
[2025-11-25 15:15:56] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 02:29 input.tar.gz
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas 918254727 Nov 25 15:14 HITS.pool.root.1
[2025-11-25 15:15:56] -rw------- 1 boincer umatlas   8335360 Nov 25 15:15 result.tar.gz
15:15:57 (28771): run_atlas exited; CPU time 351099.874597
15:15:57 (28771): called boinc_finish(0)

</stderr_txt>
]]>

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