Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:08:07 (2435599): wrapper (7.7.26015): starting
14:08:07 (2435599): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 14:08:07] Arguments: --nthreads 12
[2025-11-26 14:08:07] Threads: 12
[2025-11-26 14:08:07] Checking for CVMFS
[2025-11-26 14:08:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 14:08:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 14:08:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 14:08:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 14:08:08] 2.13.3.0 11850 7096 86184 153322 3 81 4061941 4097024 1043 130560 0 5549550 99.991 249331 22214 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-26 14:08:08] CVMFS is ok
[2025-11-26 14:08:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 14:08:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 14:08:08] Further information can be found at the LHC@home message board.
[2025-11-26 14:08:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 14:08:08] Checking for apptainer binary...
[2025-11-26 14:08:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 14:08:08] Running /usr/bin/apptainer --version
[2025-11-26 14:08:08] apptainer version 1.4.4-1.el9
[2025-11-26 14:08:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 14:08:08] pckelar1.cern.ch
[2025-11-26 14:08:08] apptainer works
[2025-11-26 14:08:08] Set ATHENA_PROC_NUMBER=12
[2025-11-26 14:08:08] Set ATHENA_CORE_NUMBER=12
[2025-11-26 14:08:08] Starting ATLAS job with PandaID=6895475304
[2025-11-26 14:08:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:57:35]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:57:35] 2025-11-27 00:57:11,294 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.5430416666663
[2025-11-27 01:57:35] 2025-11-27 00:57:11,300 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6895475304/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,301 | INFO     | extracted standard info from prmon json
[2025-11-27 01:57:35] 2025-11-27 00:57:11,301 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:57:35] 2025-11-27 00:57:11,301 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:57:35] 2025-11-27 00:57:11,321 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:57:35] 2025-11-27 00:57:11,321 | INFO     | time since job start (42532s) is within the limit (172800.0s)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,322 | INFO     | sum of square deviations: 104996501091.63268
[2025-11-27 01:57:35] 2025-11-27 00:57:11,338 | INFO     | sum of deviations: 1243076463657.9336
[2025-11-27 01:57:35] 2025-11-27 00:57:11,338 | INFO     | mean x: 1764183758.9770446
[2025-11-27 01:57:35] 2025-11-27 00:57:11,338 | INFO     | mean y: 3568482.8708751793
[2025-11-27 01:57:35] 2025-11-27 00:57:11,339 | INFO     | intersect: -20882987598.06037
[2025-11-27 01:57:35] 2025-11-27 00:57:11,340 | INFO     | chi2: 6.121182867487348
[2025-11-27 01:57:35] 2025-11-27 00:57:11,341 | INFO     | sum of square deviations: 102753262076.82637
[2025-11-27 01:57:35] 2025-11-27 00:57:11,356 | INFO     | sum of deviations: 1534421706072.6658
[2025-11-27 01:57:35] 2025-11-27 00:57:11,356 | INFO     | mean x: 1764183606.4841042
[2025-11-27 01:57:35] 2025-11-27 00:57:11,356 | INFO     | mean y: 3588276.8786127167
[2025-11-27 01:57:35] 2025-11-27 00:57:11,357 | INFO     | intersect: -26341089882.952477
[2025-11-27 01:57:35] 2025-11-27 00:57:11,358 | INFO     | chi2: 2.843194334888036
[2025-11-27 01:57:35] 2025-11-27 00:57:11,358 | INFO     | current chi2=2.843194334888036 (change=53.55155373662078 %)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,359 | INFO     | sum of square deviations: 100542209711.94753
[2025-11-27 01:57:35] 2025-11-27 00:57:11,374 | INFO     | sum of deviations: 1642786394294.2651
[2025-11-27 01:57:35] 2025-11-27 00:57:11,374 | INFO     | mean x: 1764183453.9912665
[2025-11-27 01:57:35] 2025-11-27 00:57:11,374 | INFO     | mean y: 3595740.0436681225
[2025-11-27 01:57:35] 2025-11-27 00:57:11,375 | INFO     | intersect: -28821875507.89452
[2025-11-27 01:57:35] 2025-11-27 00:57:11,376 | INFO     | chi2: 2.1964252550714325
[2025-11-27 01:57:35] 2025-11-27 00:57:11,376 | INFO     | current chi2=2.1964252550714325 (change=22.747973006286713 %)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,376 | INFO     | right removable region: 686
[2025-11-27 01:57:35] 2025-11-27 00:57:11,377 | INFO     | sum of square deviations: 102752931336.7558
[2025-11-27 01:57:35] 2025-11-27 00:57:11,392 | INFO     | sum of deviations: 1034345687743.121
[2025-11-27 01:57:35] 2025-11-27 00:57:11,393 | INFO     | mean x: 1764183911.4812138
[2025-11-27 01:57:35] 2025-11-27 00:57:11,393 | INFO     | mean y: 3582640.047687861
[2025-11-27 01:57:35] 2025-11-27 00:57:11,393 | INFO     | intersect: -17755288055.776867
[2025-11-27 01:57:35] 2025-11-27 00:57:11,394 | INFO     | chi2: 4.281892486138272
[2025-11-27 01:57:35] 2025-11-27 00:57:11,394 | INFO     | current chi2=4.281892486138272 (change=30.047956762057602 %)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,395 | INFO     | sum of square deviations: 100541633023.7903
[2025-11-27 01:57:35] 2025-11-27 00:57:11,410 | INFO     | sum of deviations: 965373317142.6517
[2025-11-27 01:57:35] 2025-11-27 00:57:11,410 | INFO     | mean x: 1764184063.9825327
[2025-11-27 01:57:35] 2025-11-27 00:57:11,411 | INFO     | mean y: 3587396.304221252
[2025-11-27 01:57:35] 2025-11-27 00:57:11,411 | INFO     | intersect: -16935626446.522787
[2025-11-27 01:57:35] 2025-11-27 00:57:11,412 | INFO     | chi2: 4.20753103027878
[2025-11-27 01:57:35] 2025-11-27 00:57:11,412 | INFO     | current chi2=4.20753103027878 (change=1.7366492993512017 %)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,412 | INFO     | left removable region: 20
[2025-11-27 01:57:35] 2025-11-27 00:57:11,413 | INFO     | sum of square deviations: 91600982602.5
[2025-11-27 01:57:35] 2025-11-27 00:57:11,428 | INFO     | sum of deviations: 1261142564653.0002
[2025-11-27 01:57:35] 2025-11-27 00:57:11,428 | INFO     | mean x: 1764184033.5
[2025-11-27 01:57:35] 2025-11-27 00:57:11,428 | INFO     | mean y: 3623211.06006006
[2025-11-27 01:57:35] 2025-11-27 00:57:11,428 | INFO     | intersect: -24285281922.009357
[2025-11-27 01:57:35] 2025-11-27 00:57:11,429 | INFO     | chi2: 0.20914320376235349
[2025-11-27 01:57:35] 2025-11-27 00:57:11,429 | INFO     | current memory leak: 13.77 B/s (using 666 data points, chi2=0.21)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,430 | INFO     | could have reported an average CPU frequency of 2802 MHz (27 samples)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,431 | INFO     | ..............................
[2025-11-27 01:57:35] 2025-11-27 00:57:11,431 | INFO     | . Timing measurements:
[2025-11-27 01:57:35] 2025-11-27 00:57:11,431 | INFO     | . get job = 0 s
[2025-11-27 01:57:35] 2025-11-27 00:57:11,431 | INFO     | . initial setup = 1 s
[2025-11-27 01:57:35] 2025-11-27 00:57:11,431 | INFO     | . payload setup = 9 s
[2025-11-27 01:57:35] 2025-11-27 00:57:11,431 | INFO     | . stage-in = 0 s
[2025-11-27 01:57:35] 2025-11-27 00:57:11,432 | INFO     | . payload execution = 42487 s
[2025-11-27 01:57:35] 2025-11-27 00:57:11,432 | INFO     | . stage-out = 3 s
[2025-11-27 01:57:35] 2025-11-27 00:57:11,432 | INFO     | . log creation = 0 s
[2025-11-27 01:57:35] 2025-11-27 00:57:11,432 | INFO     | ..............................
[2025-11-27 01:57:35] 2025-11-27 00:57:11,586 | INFO     | 
[2025-11-27 01:57:35] 2025-11-27 00:57:11,586 | INFO     | job summary report
[2025-11-27 01:57:35] 2025-11-27 00:57:11,586 | INFO     | --------------------------------------------------
[2025-11-27 01:57:35] 2025-11-27 00:57:11,587 | INFO     | PanDA job id: 6895475304
[2025-11-27 01:57:35] 2025-11-27 00:57:11,587 | INFO     | task id: 47556149
[2025-11-27 01:57:35] 2025-11-27 00:57:11,587 | INFO     | errors: (none)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,587 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:57:35] 2025-11-27 00:57:11,587 | INFO     | pilot state: finished 
[2025-11-27 01:57:35] 2025-11-27 00:57:11,587 | INFO     | transexitcode: 0
[2025-11-27 01:57:35] 2025-11-27 00:57:11,587 | INFO     | exeerrorcode: 0
[2025-11-27 01:57:35] 2025-11-27 00:57:11,588 | INFO     | exeerrordiag: 
[2025-11-27 01:57:35] 2025-11-27 00:57:11,588 | INFO     | exitcode: 0
[2025-11-27 01:57:35] 2025-11-27 00:57:11,588 | INFO     | exitmsg: OK
[2025-11-27 01:57:35] 2025-11-27 00:57:11,588 | INFO     | cpuconsumptiontime: 496735 s
[2025-11-27 01:57:35] 2025-11-27 00:57:11,588 | INFO     | nevents: 1000
[2025-11-27 01:57:35] 2025-11-27 00:57:11,588 | INFO     | neventsw: 0
[2025-11-27 01:57:35] 2025-11-27 00:57:11,589 | INFO     | pid: 2446926
[2025-11-27 01:57:35] 2025-11-27 00:57:11,589 | INFO     | pgrp: 2446926
[2025-11-27 01:57:35] 2025-11-27 00:57:11,589 | INFO     | corecount: 12
[2025-11-27 01:57:35] 2025-11-27 00:57:11,589 | INFO     | event service: False
[2025-11-27 01:57:35] 2025-11-27 00:57:11,589 | INFO     | sizes: {0: 2284144, 1: 2284343, 6: 2284605, 12: 2284633, 42500: 2329547, 42504: 2338569, 42507: 2338753, 42515: 2338999}
[2025-11-27 01:57:35] 2025-11-27 00:57:11,589 | INFO     | --------------------------------------------------
[2025-11-27 01:57:35] 2025-11-27 00:57:11,590 | INFO     | 
[2025-11-27 01:57:35] 2025-11-27 00:57:11,590 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-27 01:57:35] 2025-11-27 00:57:11,609 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,612 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,612 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,613 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,613 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:57:35] 2025-11-27 00:57:11,613 | INFO     | job 6895475304 has completed (purged errors)
[2025-11-27 01:57:35] 2025-11-27 00:57:11,613 | INFO     | overall cleanup function is called
[2025-11-27 01:57:35] 2025-11-27 00:57:12,567 | INFO     | PID=2439435 has CPU usage=18.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 01:57:35] 2025-11-27 00:57:12,567 | INFO     | .. there are 2 such processes running
[2025-11-27 01:57:35] 2025-11-27 00:57:12,634 | INFO     | --- collectZombieJob: --- 10, [2446926]
[2025-11-27 01:57:35] 2025-11-27 00:57:12,634 | INFO     | zombie collector waiting for pid 2446926
[2025-11-27 01:57:35] 2025-11-27 00:57:12,634 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:57:35] 2025-11-27 00:57:12,634 | INFO     | collected zombie processes
[2025-11-27 01:57:35] 2025-11-27 00:57:12,634 | INFO     | will attempt to kill all subprocesses of pid=2446926
[2025-11-27 01:57:35] 2025-11-27 00:57:12,825 | INFO     | process IDs to be killed: [2446926] (in reverse order)
[2025-11-27 01:57:35] 2025-11-27 00:57:12,884 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:57:35] 2025-11-27 00:57:12,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:57:35] 2025-11-27 00:57:12,891 | INFO     | did not find any defunct processes belonging to 2446926
[2025-11-27 01:57:35] 2025-11-27 00:57:12,898 | INFO     | did not find any defunct processes belonging to 2446926
[2025-11-27 01:57:35] 2025-11-27 00:57:12,900 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:57:35] 2025-11-27 00:57:12,900 | INFO     | ready for new job
[2025-11-27 01:57:35] 2025-11-27 00:57:12,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:57:35] 2025-11-27 00:57:12,903 | INFO     | ***************************************
[2025-11-27 01:57:35] 2025-11-27 00:57:12,904 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:57:35] 2025-11-27 00:57:12,904 | INFO     | ***************************************
[2025-11-27 01:57:35] 2025-11-27 00:57:12,904 | INFO     | 
[2025-11-27 01:57:35] 2025-11-27 00:57:12,905 | INFO     | architecture information:
[2025-11-27 01:57:35] 2025-11-27 00:57:12,906 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:57:35] 2025-11-27 00:57:12,921 | INFO     | cat /etc/os-release:
[2025-11-27 01:57:35] NAME="CentOS Linux"
[2025-11-27 01:57:35] VERSION="7 (Core)"
[2025-11-27 01:57:35] ID="centos"
[2025-11-27 01:57:35] ID_LIKE="rhel fedora"
[2025-11-27 01:57:35] VERSION_ID="7"
[2025-11-27 01:57:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:57:35] ANSI_COLOR="0;31"
[2025-11-27 01:57:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:57:35] HOME_URL="https://www.centos.org/"
[2025-11-27 01:57:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:57:35] 
[2025-11-27 01:57:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:57:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:57:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:57:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:57:35] 
[2025-11-27 01:57:35] 2025-11-27 00:57:12,921 | INFO     | ***************************************
[2025-11-27 01:57:35] 2025-11-27 00:57:13,424 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-27 01:57:35] 2025-11-27 00:57:13,441 | INFO     | sufficient remaining disk space (778292953088 B)
[2025-11-27 01:57:35] 2025-11-27 00:57:13,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:57:35] 2025-11-27 00:57:13,442 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:57:35] 2025-11-27 00:57:13,442 | INFO     | update_server=False
[2025-11-27 01:57:35] 2025-11-27 00:57:13,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:57:35] 2025-11-27 00:57:13,443 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 01:57:35] 2025-11-27 00:57:13,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:57:35] 2025-11-27 00:57:13,443 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:57:35] 2025-11-27 00:57:13,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:57:35] 2025-11-27 00:57:13,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:57:35] 2025-11-27 00:57:13,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:57:35] 2025-11-27 00:57:13,539 | INFO     | all data control threads have been joined
[2025-11-27 01:57:35] 2025-11-27 00:57:13,702 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 01:57:35] 2025-11-27 00:57:13,702 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 01:57:35] 2025-11-27 00:57:13,703 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:57:35] 2025-11-27 00:57:13,703 | INFO     | will abort loop
[2025-11-27 01:57:35] 2025-11-27 00:57:13,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:57:35] 2025-11-27 00:57:14,448 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:14,449 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:14,543 | INFO     | all job control threads have been joined
[2025-11-27 01:57:35] 2025-11-27 00:57:14,544 | INFO     | [data] control thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:14,622 | INFO     | all payload control threads have been joined
[2025-11-27 01:57:35] 2025-11-27 00:57:14,708 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:14,987 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,153 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,429 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,450 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,484 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,548 | INFO     | [job] control thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,597 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,628 | INFO     | [payload] control thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,685 | INFO     | [job] validate thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,714 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:15,834 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:17,795 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:57:35] 2025-11-27 00:57:29,150 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:57:35] 2025-11-27 00:57:30,093 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949424981824)>', '<ExcThread(monitor, started 139948917237504)>']
[2025-11-27 01:57:35] 2025-11-27 00:57:30,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:57:35] 2025-11-27 00:57:30,527 | INFO     | [monitor] control thread has ended
[2025-11-27 01:57:35] 2025-11-27 00:57:35,118 | INFO     | all workflow threads have been joined
[2025-11-27 01:57:35] 2025-11-27 00:57:35,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:57:35] 2025-11-27 00:57:35,119 | INFO     | traces error code: 0
[2025-11-27 01:57:35] 2025-11-27 00:57:35,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:57:35] 2025-11-27 00:57:35,246 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:57:35] 2025-11-27 00:57:35,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:57:35] 2025-11-27 00:57:35,252 [wrapper] pilotpid: 2439435
[2025-11-27 01:57:35] 2025-11-27 00:57:35,254 [wrapper] Pilot exit status: 0
[2025-11-27 01:57:35] 2025-11-27 00:57:35,265 [wrapper] pandaids: 6895475304
[2025-11-27 01:57:35] 2025-11-27 00:57:35,304 [wrapper] cleanup supervisor_pilot 2675858 2439436
[2025-11-27 01:57:35] 2025-11-27 00:57:35,307 [wrapper] Test setup, not cleaning
[2025-11-27 01:57:35] 2025-11-27 00:57:35,310 [wrapper] apfmon messages muted
[2025-11-27 01:57:35] 2025-11-27 00:57:35,312 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:57:35] 2025-11-27 00:57:35,315 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:57:35]  *** Error codes and diagnostics ***
[2025-11-27 01:57:35]     "exeErrorCode": 0,
[2025-11-27 01:57:35]     "exeErrorDiag": "",
[2025-11-27 01:57:35]     "pilotErrorCode": 0,
[2025-11-27 01:57:35]     "pilotErrorDiag": "",
[2025-11-27 01:57:35]  *** Listing of results directory ***
[2025-11-27 01:57:35] total 1311696
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc      5112 Nov 24 10:01 queuedata.json
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc    576529 Nov 24 10:01 pilot3.tar.gz
[2025-11-27 01:57:35] -rwx------ 1 boinc boinc     36292 Nov 24 10:05 runpilot2-wrapper.sh
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc       100 Nov 26 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:57:35] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 14:08 run_atlas
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc       105 Nov 26 14:08 job.xml
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc      6295 Nov 26 14:08 init_data.xml
[2025-11-27 01:57:35] -rw-r--r-- 2 boinc boinc 407655361 Nov 26 14:08 EVNT.47483658._001288.pool.root.1
[2025-11-27 01:57:35] -rw-r--r-- 2 boinc boinc     15847 Nov 26 14:08 start_atlas.sh
[2025-11-27 01:57:35] drwxrwx--x 2 boinc boinc        68 Nov 26 14:08 shared
[2025-11-27 01:57:35] -rw-r--r-- 2 boinc boinc    590104 Nov 26 14:08 input.tar.gz
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc         0 Nov 26 14:08 boinc_lockfile
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc      2786 Nov 26 14:08 pandaJob.out
[2025-11-27 01:57:35] -rw------- 1 boinc boinc    991830 Nov 26 14:08 agis_schedconf.cvmfs.json
[2025-11-27 01:57:35] drwx------ 5 boinc boinc      4096 Nov 26 14:08 pilot3
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc       533 Nov 27 01:45 boinc_task_state.xml
[2025-11-27 01:57:35] -rw------- 1 boinc boinc 914803904 Nov 27 01:56 HITS.47556149._002743.pool.root.1
[2025-11-27 01:57:35] -rw------- 1 boinc boinc        95 Nov 27 01:56 pilot_heartbeat.json
[2025-11-27 01:57:35] -rw------- 1 boinc boinc      1038 Nov 27 01:56 memory_monitor_summary.json
[2025-11-27 01:57:35] -rw------- 1 boinc boinc   1516240 Nov 27 01:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:57:35] -rw------- 1 boinc boinc   2391901 Nov 27 01:56 log.47556149._002743.job.log.tgz.1
[2025-11-27 01:57:35] -rw------- 1 boinc boinc      8612 Nov 27 01:57 heartbeat.json
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc        29 Nov 27 01:57 wrapper_checkpoint.txt
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc      8192 Nov 27 01:57 boinc_mmap_file
[2025-11-27 01:57:35] -rw------- 1 boinc boinc      4739 Nov 27 01:57 pilotlog.txt
[2025-11-27 01:57:35] -rw------- 1 boinc boinc   6011836 Nov 27 01:57 log.47556149._002743.job.log.1
[2025-11-27 01:57:35] -rw------- 1 boinc boinc       353 Nov 27 01:57 output.list
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc       620 Nov 27 01:57 runtime_log
[2025-11-27 01:57:35] -rw------- 1 boinc boinc   8427520 Nov 27 01:57 result.tar.gz
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc      8842 Nov 27 01:57 runtime_log.err
[2025-11-27 01:57:35] -rw------- 1 boinc boinc       665 Nov 27 01:57 jh0LDmjghh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrzIKDmuU4mCn.diag
[2025-11-27 01:57:35] -rw-r--r-- 1 boinc boinc     21336 Nov 27 01:57 stderr.txt
[2025-11-27 01:57:35] HITS file was successfully produced:
[2025-11-27 01:57:35] -rw------- 1 boinc boinc 914803904 Nov 27 01:56 shared/HITS.pool.root.1
[2025-11-27 01:57:35]  *** Contents of shared directory: ***
[2025-11-27 01:57:35] total 1300296
[2025-11-27 01:57:35] -rw-r--r-- 2 boinc boinc 407655361 Nov 26 14:08 ATLAS.root_0
[2025-11-27 01:57:35] -rw-r--r-- 2 boinc boinc     15847 Nov 26 14:08 start_atlas.sh
[2025-11-27 01:57:35] -rw-r--r-- 2 boinc boinc    590104 Nov 26 14:08 input.tar.gz
[2025-11-27 01:57:35] -rw------- 1 boinc boinc 914803904 Nov 27 01:56 HITS.pool.root.1
[2025-11-27 01:57:35] -rw------- 1 boinc boinc   8427520 Nov 27 01:57 result.tar.gz
01:57:36 (2435599): run_atlas exited; CPU time 496970.497596
01:57:36 (2435599): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN