Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:53:36 (684196): wrapper (7.7.26015): starting
07:53:36 (684196): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 07:53:36] Arguments: --nthreads 4
[2025-11-27 07:53:36] Threads: 4
[2025-11-27 07:53:36] Checking for CVMFS
[2025-11-27 07:53:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 07:53:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 07:53:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 07:53:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 07:53:36] 2.12.7.0 1898503 12943 57368 153350 0 81 3204189 4096001 846 130560 56 7915623 99.920 759007 422 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.210:3128 1
[2025-11-27 07:53:36] CVMFS is ok
[2025-11-27 07:53:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 07:53:36] Checking for apptainer binary...
[2025-11-27 07:53:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 07:53:36] Running /usr/bin/apptainer --version
[2025-11-27 07:53:36] apptainer version 1.4.2
[2025-11-27 07:53:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 07:53:37] TC-910
[2025-11-27 07:53:37] apptainer works
[2025-11-27 07:53:37] Set ATHENA_PROC_NUMBER=4
[2025-11-27 07:53:37] Set ATHENA_CORE_NUMBER=4
[2025-11-27 07:53:37] Starting ATLAS job with PandaID=6895418030
[2025-11-27 07:53:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:46:07]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:46:07] 2025-11-27 19:45:08,602 | INFO     | monitor loop #3459: job 0:6895418030 is in state 'finished'
[2025-11-27 20:46:07] 2025-11-27 19:45:08,602 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:46:07] 2025-11-27 19:45:08,693 | INFO     | time since job start (46284s) is within the limit (172800.0s)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,530 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 20:46:07] 2025-11-27 19:45:09,531 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3999.7365
[2025-11-27 20:46:07] 2025-11-27 19:45:09,533 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6895418030/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,533 | INFO     | extracted standard info from prmon json
[2025-11-27 20:46:07] 2025-11-27 19:45:09,533 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:46:07] 2025-11-27 19:45:09,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:46:07] 2025-11-27 19:45:09,542 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:46:07] 2025-11-27 19:45:09,542 | INFO     | sum of square deviations: 135582300260.0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,552 | INFO     | sum of deviations: 532399799953.0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,552 | INFO     | mean x: 1764249563.0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,552 | INFO     | mean y: 2357161.716732543
[2025-11-27 20:46:07] 2025-11-27 19:45:09,552 | INFO     | intersect: -6925435865.891896
[2025-11-27 20:46:07] 2025-11-27 19:45:09,553 | INFO     | chi2: 3.6440207692194937
[2025-11-27 20:46:07] 2025-11-27 19:45:09,554 | INFO     | sum of square deviations: 132920417792.5
[2025-11-27 20:46:07] 2025-11-27 19:45:09,563 | INFO     | sum of deviations: 677940799508.4999
[2025-11-27 20:46:07] 2025-11-27 19:45:09,563 | INFO     | mean x: 1764249410.5
[2025-11-27 20:46:07] 2025-11-27 19:45:09,563 | INFO     | mean y: 2365482.733421751
[2025-11-27 20:46:07] 2025-11-27 19:45:09,563 | INFO     | intersect: -8995925944.200813
[2025-11-27 20:46:07] 2025-11-27 19:45:09,564 | INFO     | chi2: 1.5693508930059041
[2025-11-27 20:46:07] 2025-11-27 19:45:09,564 | INFO     | current chi2=1.5693508930059041 (change=56.93353599238568 %)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,564 | INFO     | sum of square deviations: 130293605750.0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,574 | INFO     | sum of deviations: 671110071755.0001
[2025-11-27 20:46:07] 2025-11-27 19:45:09,574 | INFO     | mean x: 1764249258.0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,574 | INFO     | mean y: 2365086.1562082777
[2025-11-27 20:46:07] 2025-11-27 19:45:09,574 | INFO     | intersect: -9084845597.090124
[2025-11-27 20:46:07] 2025-11-27 19:45:09,575 | INFO     | chi2: 1.567160873969409
[2025-11-27 20:46:07] 2025-11-27 19:45:09,575 | INFO     | current chi2=1.567160873969409 (change=0.13954935421105624 %)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,575 | INFO     | right removable region: 748
[2025-11-27 20:46:07] 2025-11-27 19:45:09,576 | INFO     | sum of square deviations: 132920417792.5
[2025-11-27 20:46:07] 2025-11-27 19:45:09,585 | INFO     | sum of deviations: 423855419621.9998
[2025-11-27 20:46:07] 2025-11-27 19:45:09,585 | INFO     | mean x: 1764249715.5
[2025-11-27 20:46:07] 2025-11-27 19:45:09,585 | INFO     | mean y: 2363361.0159151196
[2025-11-27 20:46:07] 2025-11-27 19:45:09,585 | INFO     | intersect: -5623460089.588978
[2025-11-27 20:46:07] 2025-11-27 19:45:09,586 | INFO     | chi2: 2.2966053370671586
[2025-11-27 20:46:07] 2025-11-27 19:45:09,586 | INFO     | current chi2=2.2966053370671586 (change=36.97606346082752 %)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,587 | INFO     | sum of square deviations: 130293605750.0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,597 | INFO     | sum of deviations: 416533264248.0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,597 | INFO     | mean x: 1764249868.0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,597 | INFO     | mean y: 2363785.6208277703
[2025-11-27 20:46:07] 2025-11-27 19:45:09,597 | INFO     | intersect: -5637734607.827333
[2025-11-27 20:46:07] 2025-11-27 19:45:09,598 | INFO     | chi2: 2.295931132462043
[2025-11-27 20:46:07] 2025-11-27 19:45:09,598 | INFO     | current chi2=2.295931132462043 (change=0.029356572251833312 %)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,598 | INFO     | left removable region: 20
[2025-11-27 20:46:07] 2025-11-27 19:45:09,598 | INFO     | sum of square deviations: 119638715742.0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,607 | INFO     | sum of deviations: 506021958889.00006
[2025-11-27 20:46:07] 2025-11-27 19:45:09,608 | INFO     | mean x: 1764249837.5
[2025-11-27 20:46:07] 2025-11-27 19:45:09,608 | INFO     | mean y: 2374751.7967032967
[2025-11-27 20:46:07] 2025-11-27 19:45:09,608 | INFO     | intersect: -7459667557.872993
[2025-11-27 20:46:07] 2025-11-27 19:45:09,608 | INFO     | chi2: 0.1673776168059531
[2025-11-27 20:46:07] 2025-11-27 19:45:09,608 | INFO     | current memory leak: 4.23 B/s (using 728 data points, chi2=0.17)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,609 | INFO     | could have reported an average CPU frequency of 3999 MHz (29 samples)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,609 | INFO     | ..............................
[2025-11-27 20:46:07] 2025-11-27 19:45:09,609 | INFO     | . Timing measurements:
[2025-11-27 20:46:07] 2025-11-27 19:45:09,609 | INFO     | . get job = 0 s
[2025-11-27 20:46:07] 2025-11-27 19:45:09,609 | INFO     | . initial setup = 1 s
[2025-11-27 20:46:07] 2025-11-27 19:45:09,609 | INFO     | . payload setup = 3 s
[2025-11-27 20:46:07] 2025-11-27 19:45:09,609 | INFO     | . stage-in = 0 s
[2025-11-27 20:46:07] 2025-11-27 19:45:09,609 | INFO     | . payload execution = 46255 s
[2025-11-27 20:46:07] 2025-11-27 19:45:09,609 | INFO     | . stage-out = 1 s
[2025-11-27 20:46:07] 2025-11-27 19:45:09,610 | INFO     | . log creation = 0 s
[2025-11-27 20:46:07] 2025-11-27 19:45:09,610 | INFO     | ..............................
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | 
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | job summary report
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | --------------------------------------------------
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | PanDA job id: 6895418030
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | task id: 47556149
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | errors: (none)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | pilot state: finished 
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | transexitcode: 0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | exeerrorcode: 0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,978 | INFO     | exeerrordiag: 
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | exitcode: 0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | exitmsg: OK
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | cpuconsumptiontime: 181584 s
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | nevents: 1000
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | neventsw: 0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | pid: 694328
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | pgrp: 694328
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | corecount: 4
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | event service: False
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | sizes: {0: 2284316, 3: 2284578, 11: 2284606, 46263: 2331348, 46265: 2340344, 46266: 2340400, 46272: 2340774}
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | --------------------------------------------------
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | 
[2025-11-27 20:46:07] 2025-11-27 19:45:09,979 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-11-27 20:46:07] 2025-11-27 19:45:09,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | job 6895418030 has completed (purged errors)
[2025-11-27 20:46:07] 2025-11-27 19:45:09,992 | INFO     | overall cleanup function is called
[2025-11-27 20:46:07] 2025-11-27 19:45:11,018 | INFO     | --- collectZombieJob: --- 10, [694328]
[2025-11-27 20:46:07] 2025-11-27 19:45:11,019 | INFO     | zombie collector waiting for pid 694328
[2025-11-27 20:46:07] 2025-11-27 19:45:11,019 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:46:07] 2025-11-27 19:45:11,019 | INFO     | collected zombie processes
[2025-11-27 20:46:07] 2025-11-27 19:45:11,019 | INFO     | will attempt to kill all subprocesses of pid=694328
[2025-11-27 20:46:07] 2025-11-27 19:45:11,096 | INFO     | process IDs to be killed: [694328] (in reverse order)
[2025-11-27 20:46:07] 2025-11-27 19:45:11,126 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:46:07] 2025-11-27 19:45:11,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:46:07] 2025-11-27 19:45:11,128 | INFO     | did not find any defunct processes belonging to 694328
[2025-11-27 20:46:07] 2025-11-27 19:45:11,131 | INFO     | did not find any defunct processes belonging to 694328
[2025-11-27 20:46:07] 2025-11-27 19:45:11,132 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:46:07] 2025-11-27 19:45:11,132 | INFO     | ready for new job
[2025-11-27 20:46:07] 2025-11-27 19:45:11,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:46:07] 2025-11-27 19:45:11,134 | INFO     | ***************************************
[2025-11-27 20:46:07] 2025-11-27 19:45:11,134 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:46:07] 2025-11-27 19:45:11,134 | INFO     | ***************************************
[2025-11-27 20:46:07] 2025-11-27 19:45:11,134 | INFO     | 
[2025-11-27 20:46:07] 2025-11-27 19:45:11,135 | INFO     | architecture information:
[2025-11-27 20:46:07] 2025-11-27 19:45:11,135 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:46:07] 2025-11-27 19:45:11,143 | INFO     | cat /etc/os-release:
[2025-11-27 20:46:07] NAME="CentOS Linux"
[2025-11-27 20:46:07] VERSION="7 (Core)"
[2025-11-27 20:46:07] ID="centos"
[2025-11-27 20:46:07] ID_LIKE="rhel fedora"
[2025-11-27 20:46:07] VERSION_ID="7"
[2025-11-27 20:46:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:46:07] ANSI_COLOR="0;31"
[2025-11-27 20:46:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:46:07] HOME_URL="https://www.centos.org/"
[2025-11-27 20:46:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:46:07] 
[2025-11-27 20:46:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:46:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:46:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:46:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:46:07] 
[2025-11-27 20:46:07] 2025-11-27 19:45:11,144 | INFO     | ***************************************
[2025-11-27 20:46:07] 2025-11-27 19:45:11,647 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-11-27 20:46:07] 2025-11-27 19:45:11,655 | INFO     | sufficient remaining disk space (122057392128 B)
[2025-11-27 20:46:07] 2025-11-27 19:45:11,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:46:07] 2025-11-27 19:45:11,656 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:46:07] 2025-11-27 19:45:11,656 | INFO     | update_server=False
[2025-11-27 20:46:07] 2025-11-27 19:45:11,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:46:07] 2025-11-27 19:45:11,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:46:07] 2025-11-27 19:45:11,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:46:07] 2025-11-27 19:45:11,805 | INFO     | all job control threads have been joined
[2025-11-27 20:46:07] 2025-11-27 19:45:11,875 | INFO     | all payload control threads have been joined
[2025-11-27 20:46:07] 2025-11-27 19:45:12,051 | INFO     | all data control threads have been joined
[2025-11-27 20:46:07] 2025-11-27 19:45:12,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:46:07] 2025-11-27 19:45:12,112 | INFO     | aborting loop
[2025-11-27 20:46:07] 2025-11-27 19:45:12,658 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:12,661 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:12,739 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:12,778 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:12,810 | INFO     | [job] control thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:12,878 | INFO     | [payload] control thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:13,056 | INFO     | [data] control thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:13,115 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:13,175 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:13,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:13,577 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:13,662 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:13,832 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:13,902 | INFO     | [job] validate thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:14,042 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:14,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:46:07] 2025-11-27 19:45:18,337 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:46:07] 2025-11-27 19:45:41,840 | INFO     | PID=687904 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 20:46:07] 2025-11-27 19:45:41,841 | INFO     | .. there are 2 such processes running
[2025-11-27 20:46:07] 2025-11-27 19:45:41,841 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:46:07] 2025-11-27 19:45:41,841 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:46:07] 2025-11-27 19:45:41,841 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:46:07] 2025-11-27 19:46:00,763 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:46:07] 2025-11-27 19:46:02,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068063352640)>', '<ExcThread(monitor, started 140067205019392)>']
[2025-11-27 20:46:07] 2025-11-27 19:46:02,928 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:46:07] 2025-11-27 19:46:02,929 | INFO     | [monitor] control thread has ended
[2025-11-27 20:46:07] 2025-11-27 19:46:07,142 | INFO     | all workflow threads have been joined
[2025-11-27 20:46:07] 2025-11-27 19:46:07,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:46:07] 2025-11-27 19:46:07,142 | INFO     | traces error code: 0
[2025-11-27 20:46:07] 2025-11-27 19:46:07,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:46:07] 2025-11-27 19:46:07,253 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:46:07] 2025-11-27 19:46:07,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:46:07] 2025-11-27 19:46:07,256 [wrapper] pilotpid: 687904
[2025-11-27 20:46:07] 2025-11-27 19:46:07,258 [wrapper] Pilot exit status: 0
[2025-11-27 20:46:07] 2025-11-27 19:46:07,291 [wrapper] pandaids: 6895418030
[2025-11-27 20:46:07] 2025-11-27 19:46:07,310 [wrapper] cleanup supervisor_pilot  851768 687905
[2025-11-27 20:46:07] 2025-11-27 19:46:07,312 [wrapper] Test setup, not cleaning
[2025-11-27 20:46:07] 2025-11-27 19:46:07,314 [wrapper] apfmon messages muted
[2025-11-27 20:46:07] 2025-11-27 19:46:07,315 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:46:07] 2025-11-27 19:46:07,317 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:46:07]  *** Error codes and diagnostics ***
[2025-11-27 20:46:07]     "exeErrorCode": 0,
[2025-11-27 20:46:07]     "exeErrorDiag": "",
[2025-11-27 20:46:07]     "pilotErrorCode": 0,
[2025-11-27 20:46:07]     "pilotErrorDiag": "",
[2025-11-27 20:46:07]  *** Listing of results directory ***
[2025-11-27 20:46:07] insgesamt 1319696
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc    576529 24. Nov 09:46 pilot3.tar.gz
[2025-11-27 20:46:07] -rwx------ 1 boinc boinc     36292 24. Nov 09:53 runpilot2-wrapper.sh
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc      5112 24. Nov 09:53 queuedata.json
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc       100 27. Nov 07:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:46:07] -rwxr-xr-x 1 boinc boinc      7986 27. Nov 07:53 run_atlas
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc       105 27. Nov 07:53 job.xml
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc      9854 27. Nov 07:53 init_data.xml
[2025-11-27 20:46:07] -rw-r--r-- 2 boinc boinc 411005443 27. Nov 07:53 EVNT.47483658._001282.pool.root.1
[2025-11-27 20:46:07] drwxrwx--x 2 boinc boinc      4096 27. Nov 07:53 shared
[2025-11-27 20:46:07] -rw-r--r-- 2 boinc boinc    590101 27. Nov 07:53 input.tar.gz
[2025-11-27 20:46:07] -rw-r--r-- 2 boinc boinc     15847 27. Nov 07:53 start_atlas.sh
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc         0 27. Nov 07:53 boinc_lockfile
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc      2786 27. Nov 07:53 pandaJob.out
[2025-11-27 20:46:07] -rw------- 1 boinc boinc        52 27. Nov 07:53 setup.sh.local
[2025-11-27 20:46:07] -rw------- 1 boinc boinc    991554 27. Nov 07:53 agis_schedconf.cvmfs.json
[2025-11-27 20:46:07] drwx------ 5 boinc boinc      4096 27. Nov 07:53 pilot3
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc       532 27. Nov 20:40 boinc_task_state.xml
[2025-11-27 20:46:07] -rw------- 1 boinc boinc 920230324 27. Nov 20:44 HITS.47556149._002683.pool.root.1
[2025-11-27 20:46:07] -rw------- 1 boinc boinc        95 27. Nov 20:44 pilot_heartbeat.json
[2025-11-27 20:46:07] -rw------- 1 boinc boinc      1041 27. Nov 20:44 memory_monitor_summary.json
[2025-11-27 20:46:07] -rw------- 1 boinc boinc   1516240 27. Nov 20:45 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:46:07] -rw------- 1 boinc boinc   1514247 27. Nov 20:45 log.47556149._002683.job.log.tgz.1
[2025-11-27 20:46:07] -rw------- 1 boinc boinc      8592 27. Nov 20:45 heartbeat.json
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc      8192 27. Nov 20:45 boinc_mmap_file
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc        29 27. Nov 20:45 wrapper_checkpoint.txt
[2025-11-27 20:46:07] -rw------- 1 boinc boinc      4824 27. Nov 20:46 pilotlog.txt
[2025-11-27 20:46:07] -rw------- 1 boinc boinc   6587523 27. Nov 20:46 log.47556149._002683.job.log.1
[2025-11-27 20:46:07] -rw------- 1 boinc boinc       353 27. Nov 20:46 output.list
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc       620 27. Nov 20:46 runtime_log
[2025-11-27 20:46:07] -rw------- 1 boinc boinc   8120320 27. Nov 20:46 result.tar.gz
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc      9299 27. Nov 20:46 runtime_log.err
[2025-11-27 20:46:07] -rw------- 1 boinc boinc       656 27. Nov 20:46 8TpNDmrUhh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMzIKDmsHUmOn.diag
[2025-11-27 20:46:07] -rw-r--r-- 1 boinc boinc     20920 27. Nov 20:46 stderr.txt
[2025-11-27 20:46:07] HITS file was successfully produced:
[2025-11-27 20:46:07] -rw------- 1 boinc boinc 920230324 27. Nov 20:44 shared/HITS.pool.root.1
[2025-11-27 20:46:07]  *** Contents of shared directory: ***
[2025-11-27 20:46:07] insgesamt 1308576
[2025-11-27 20:46:07] -rw-r--r-- 2 boinc boinc 411005443 27. Nov 07:53 ATLAS.root_0
[2025-11-27 20:46:07] -rw-r--r-- 2 boinc boinc    590101 27. Nov 07:53 input.tar.gz
[2025-11-27 20:46:07] -rw-r--r-- 2 boinc boinc     15847 27. Nov 07:53 start_atlas.sh
[2025-11-27 20:46:07] -rw------- 1 boinc boinc 920230324 27. Nov 20:44 HITS.pool.root.1
[2025-11-27 20:46:07] -rw------- 1 boinc boinc   8120320 27. Nov 20:46 result.tar.gz
20:46:09 (684196): run_atlas exited; CPU time 181829.859628
20:46:09 (684196): called boinc_finish(0)

</stderr_txt>
]]>

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