Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:16:09 (2151817): wrapper (7.7.26015): starting
23:16:09 (2151817): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 23:16:09] Arguments: --nthreads 12
[2025-11-25 23:16:09] Threads: 12
[2025-11-25 23:16:09] Checking for CVMFS
[2025-11-25 23:16:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:16:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:16:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:16:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:16:10] 2.13.3.0 13543 6170 92048 153300 0 72 2083892 4097025 1044 130560 0 4781402 99.931 530575 18548 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 23:16:10] CVMFS is ok
[2025-11-25 23:16:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:16:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:16:10] Further information can be found at the LHC@home message board.
[2025-11-25 23:16:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:16:10] Checking for apptainer binary...
[2025-11-25 23:16:10] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-25 23:16:10] apptainer is not installed, using version from CVMFS
[2025-11-25 23:16:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:16:10] pckelar5.cern.ch
[2025-11-25 23:16:10] apptainer works
[2025-11-25 23:16:10] Set ATHENA_PROC_NUMBER=12
[2025-11-25 23:16:10] Set ATHENA_CORE_NUMBER=12
[2025-11-25 23:16:10] Starting ATLAS job with PandaID=6895418031
[2025-11-25 23:16:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:17:49]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:17:49] 2025-11-26 10:17:15,463 | INFO     | time since job start (43254s) is within the limit (172800.0s)
[2025-11-26 11:17:49] 2025-11-26 10:17:15,608 | INFO     | monitor loop #3051: job 0:6895418031 is in state 'finished'
[2025-11-26 11:17:49] 2025-11-26 10:17:15,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,319 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 11:17:49] 2025-11-26 10:17:16,324 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.850041666667
[2025-11-26 11:17:49] 2025-11-26 10:17:16,330 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6895418031/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,330 | INFO     | extracted standard info from prmon json
[2025-11-26 11:17:49] 2025-11-26 10:17:16,331 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:17:49] 2025-11-26 10:17:16,331 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:17:49] 2025-11-26 10:17:16,351 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:17:49] 2025-11-26 10:17:16,352 | INFO     | sum of square deviations: 110513452355.63896
[2025-11-26 11:17:49] 2025-11-26 10:17:16,369 | INFO     | sum of deviations: 1407165292242.177
[2025-11-26 11:17:49] 2025-11-26 10:17:16,369 | INFO     | mean x: 1764130606.977433
[2025-11-26 11:17:49] 2025-11-26 10:17:16,369 | INFO     | mean y: 3573435.448519041
[2025-11-26 11:17:49] 2025-11-26 10:17:16,369 | INFO     | intersect: -22459061729.835976
[2025-11-26 11:17:49] 2025-11-26 10:17:16,371 | INFO     | chi2: 6.542088423732357
[2025-11-26 11:17:49] 2025-11-26 10:17:16,372 | INFO     | sum of square deviations: 108192020185.82812
[2025-11-26 11:17:49] 2025-11-26 10:17:16,388 | INFO     | sum of deviations: 1697017807044.4844
[2025-11-26 11:17:49] 2025-11-26 10:17:16,388 | INFO     | mean x: 1764130454.484375
[2025-11-26 11:17:49] 2025-11-26 10:17:16,388 | INFO     | mean y: 3592464.453125
[2025-11-26 11:17:49] 2025-11-26 10:17:16,389 | INFO     | intersect: -27667217176.289776
[2025-11-26 11:17:49] 2025-11-26 10:17:16,390 | INFO     | chi2: 3.411064910616621
[2025-11-26 11:17:49] 2025-11-26 10:17:16,390 | INFO     | current chi2=3.411064910616621 (change=47.85969418813575 %)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,391 | INFO     | sum of square deviations: 105903332815.94849
[2025-11-26 11:17:49] 2025-11-26 10:17:16,407 | INFO     | sum of deviations: 1822975344579.0906
[2025-11-26 11:17:49] 2025-11-26 10:17:16,407 | INFO     | mean x: 1764130301.9914162
[2025-11-26 11:17:49] 2025-11-26 10:17:16,408 | INFO     | mean y: 3600844.515021459
[2025-11-26 11:17:49] 2025-11-26 10:17:16,408 | INFO     | intersect: -30363394788.60928
[2025-11-26 11:17:49] 2025-11-26 10:17:16,409 | INFO     | chi2: 2.6019862817180317
[2025-11-26 11:17:49] 2025-11-26 10:17:16,409 | INFO     | current chi2=2.6019862817180317 (change=23.719238715757285 %)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,409 | INFO     | right removable region: 698
[2025-11-26 11:17:49] 2025-11-26 10:17:16,410 | INFO     | sum of square deviations: 108191640461.79568
[2025-11-26 11:17:49] 2025-11-26 10:17:16,426 | INFO     | sum of deviations: 1155384914932.5125
[2025-11-26 11:17:49] 2025-11-26 10:17:16,426 | INFO     | mean x: 1764130759.4829545
[2025-11-26 11:17:49] 2025-11-26 10:17:16,426 | INFO     | mean y: 3589946.7926136362
[2025-11-26 11:17:49] 2025-11-26 10:17:16,427 | INFO     | intersect: -18835666568.54586
[2025-11-26 11:17:49] 2025-11-26 10:17:16,428 | INFO     | chi2: 4.21033263758021
[2025-11-26 11:17:49] 2025-11-26 10:17:16,428 | INFO     | current chi2=4.21033263758021 (change=35.64237648781039 %)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,429 | INFO     | sum of square deviations: 105902745391.79414
[2025-11-26 11:17:49] 2025-11-26 10:17:16,445 | INFO     | sum of deviations: 1082985522766.8029
[2025-11-26 11:17:49] 2025-11-26 10:17:16,445 | INFO     | mean x: 1764130911.9828327
[2025-11-26 11:17:49] 2025-11-26 10:17:16,445 | INFO     | mean y: 3594768.816881259
[2025-11-26 11:17:49] 2025-11-26 10:17:16,446 | INFO     | intersect: -18036808535.881973
[2025-11-26 11:17:49] 2025-11-26 10:17:16,447 | INFO     | chi2: 4.13421878086127
[2025-11-26 11:17:49] 2025-11-26 10:17:16,447 | INFO     | current chi2=4.13421878086127 (change=1.807787252711824 %)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,447 | INFO     | left removable region: 20
[2025-11-26 11:17:49] 2025-11-26 10:17:16,448 | INFO     | sum of square deviations: 96642157047.49834
[2025-11-26 11:17:49] 2025-11-26 10:17:16,463 | INFO     | sum of deviations: 1411329528597.0762
[2025-11-26 11:17:49] 2025-11-26 10:17:16,464 | INFO     | mean x: 1764130881.4985251
[2025-11-26 11:17:49] 2025-11-26 10:17:16,464 | INFO     | mean y: 3630444.0766961654
[2025-11-26 11:17:49] 2025-11-26 10:17:16,464 | INFO     | intersect: -25759143084.924416
[2025-11-26 11:17:49] 2025-11-26 10:17:16,465 | INFO     | chi2: 0.09392549156231295
[2025-11-26 11:17:49] 2025-11-26 10:17:16,465 | INFO     | current memory leak: 14.60 B/s (using 678 data points, chi2=0.09)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,466 | INFO     | could have reported an average CPU frequency of 2802 MHz (27 samples)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,466 | INFO     | ..............................
[2025-11-26 11:17:49] 2025-11-26 10:17:16,467 | INFO     | . Timing measurements:
[2025-11-26 11:17:49] 2025-11-26 10:17:16,467 | INFO     | . get job = 0 s
[2025-11-26 11:17:49] 2025-11-26 10:17:16,467 | INFO     | . initial setup = 1 s
[2025-11-26 11:17:49] 2025-11-26 10:17:16,467 | INFO     | . payload setup = 8 s
[2025-11-26 11:17:49] 2025-11-26 10:17:16,467 | INFO     | . stage-in = 0 s
[2025-11-26 11:17:49] 2025-11-26 10:17:16,467 | INFO     | . payload execution = 43217 s
[2025-11-26 11:17:49] 2025-11-26 10:17:16,468 | INFO     | . stage-out = 2 s
[2025-11-26 11:17:49] 2025-11-26 10:17:16,468 | INFO     | . log creation = 0 s
[2025-11-26 11:17:49] 2025-11-26 10:17:16,468 | INFO     | ..............................
[2025-11-26 11:17:49] 2025-11-26 10:17:16,622 | INFO     | 
[2025-11-26 11:17:49] 2025-11-26 10:17:16,623 | INFO     | job summary report
[2025-11-26 11:17:49] 2025-11-26 10:17:16,623 | INFO     | --------------------------------------------------
[2025-11-26 11:17:49] 2025-11-26 10:17:16,623 | INFO     | PanDA job id: 6895418031
[2025-11-26 11:17:49] 2025-11-26 10:17:16,623 | INFO     | task id: 47556149
[2025-11-26 11:17:49] 2025-11-26 10:17:16,623 | INFO     | errors: (none)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,624 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:17:49] 2025-11-26 10:17:16,624 | INFO     | pilot state: finished 
[2025-11-26 11:17:49] 2025-11-26 10:17:16,624 | INFO     | transexitcode: 0
[2025-11-26 11:17:49] 2025-11-26 10:17:16,624 | INFO     | exeerrorcode: 0
[2025-11-26 11:17:49] 2025-11-26 10:17:16,624 | INFO     | exeerrordiag: 
[2025-11-26 11:17:49] 2025-11-26 10:17:16,624 | INFO     | exitcode: 0
[2025-11-26 11:17:49] 2025-11-26 10:17:16,625 | INFO     | exitmsg: OK
[2025-11-26 11:17:49] 2025-11-26 10:17:16,625 | INFO     | cpuconsumptiontime: 503677 s
[2025-11-26 11:17:49] 2025-11-26 10:17:16,625 | INFO     | nevents: 1000
[2025-11-26 11:17:49] 2025-11-26 10:17:16,625 | INFO     | neventsw: 0
[2025-11-26 11:17:49] 2025-11-26 10:17:16,625 | INFO     | pid: 2163165
[2025-11-26 11:17:49] 2025-11-26 10:17:16,625 | INFO     | pgrp: 2163165
[2025-11-26 11:17:49] 2025-11-26 10:17:16,626 | INFO     | corecount: 12
[2025-11-26 11:17:49] 2025-11-26 10:17:16,626 | INFO     | event service: False
[2025-11-26 11:17:49] 2025-11-26 10:17:16,626 | INFO     | sizes: {0: 2284144, 1: 2284343, 6: 2284605, 12: 2284633, 43229: 2328691, 43232: 2337869, 43238: 2338059}
[2025-11-26 11:17:49] 2025-11-26 10:17:16,626 | INFO     | --------------------------------------------------
[2025-11-26 11:17:49] 2025-11-26 10:17:16,626 | INFO     | 
[2025-11-26 11:17:49] 2025-11-26 10:17:16,626 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-26 11:17:49] 2025-11-26 10:17:16,647 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,647 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,647 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,647 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,648 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,648 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,648 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,648 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,648 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,648 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,649 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,649 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,649 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,649 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,650 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,650 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:17:49] 2025-11-26 10:17:16,650 | INFO     | job 6895418031 has completed (purged errors)
[2025-11-26 11:17:49] 2025-11-26 10:17:16,650 | INFO     | overall cleanup function is called
[2025-11-26 11:17:49] 2025-11-26 10:17:17,673 | INFO     | --- collectZombieJob: --- 10, [2163165]
[2025-11-26 11:17:49] 2025-11-26 10:17:17,673 | INFO     | zombie collector waiting for pid 2163165
[2025-11-26 11:17:49] 2025-11-26 10:17:17,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:17:49] 2025-11-26 10:17:17,674 | INFO     | collected zombie processes
[2025-11-26 11:17:49] 2025-11-26 10:17:17,674 | INFO     | will attempt to kill all subprocesses of pid=2163165
[2025-11-26 11:17:49] 2025-11-26 10:17:17,877 | INFO     | process IDs to be killed: [2163165] (in reverse order)
[2025-11-26 11:17:49] 2025-11-26 10:17:17,940 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:17:49] 2025-11-26 10:17:17,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:17:49] 2025-11-26 10:17:17,946 | INFO     | did not find any defunct processes belonging to 2163165
[2025-11-26 11:17:49] 2025-11-26 10:17:17,951 | INFO     | did not find any defunct processes belonging to 2163165
[2025-11-26 11:17:49] 2025-11-26 10:17:17,953 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:17:49] 2025-11-26 10:17:17,953 | INFO     | ready for new job
[2025-11-26 11:17:49] 2025-11-26 10:17:17,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:17:49] 2025-11-26 10:17:17,956 | INFO     | ***************************************
[2025-11-26 11:17:49] 2025-11-26 10:17:17,956 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:17:49] 2025-11-26 10:17:17,956 | INFO     | ***************************************
[2025-11-26 11:17:49] 2025-11-26 10:17:17,956 | INFO     | 
[2025-11-26 11:17:49] 2025-11-26 10:17:17,958 | INFO     | architecture information:
[2025-11-26 11:17:49] 2025-11-26 10:17:17,958 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:17:49] 2025-11-26 10:17:17,973 | INFO     | cat /etc/os-release:
[2025-11-26 11:17:49] NAME="CentOS Linux"
[2025-11-26 11:17:49] VERSION="7 (Core)"
[2025-11-26 11:17:49] ID="centos"
[2025-11-26 11:17:49] ID_LIKE="rhel fedora"
[2025-11-26 11:17:49] VERSION_ID="7"
[2025-11-26 11:17:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:17:49] ANSI_COLOR="0;31"
[2025-11-26 11:17:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:17:49] HOME_URL="https://www.centos.org/"
[2025-11-26 11:17:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:17:49] 
[2025-11-26 11:17:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:17:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:17:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:17:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:17:49] 
[2025-11-26 11:17:49] 2025-11-26 10:17:17,973 | INFO     | ***************************************
[2025-11-26 11:17:49] 2025-11-26 10:17:18,476 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-26 11:17:49] 2025-11-26 10:17:18,494 | INFO     | sufficient remaining disk space (1815193059328 B)
[2025-11-26 11:17:49] 2025-11-26 10:17:18,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:17:49] 2025-11-26 10:17:18,495 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:17:49] 2025-11-26 10:17:18,495 | INFO     | update_server=False
[2025-11-26 11:17:49] 2025-11-26 10:17:18,495 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:17:49] 2025-11-26 10:17:18,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:17:49] 2025-11-26 10:17:18,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:17:49] 2025-11-26 10:17:18,578 | INFO     | all payload control threads have been joined
[2025-11-26 11:17:49] 2025-11-26 10:17:19,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:17:49] 2025-11-26 10:17:19,121 | INFO     | aborting loop
[2025-11-26 11:17:49] 2025-11-26 10:17:19,167 | INFO     | all data control threads have been joined
[2025-11-26 11:17:49] 2025-11-26 10:17:19,500 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:19,501 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:19,583 | INFO     | [payload] control thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:19,645 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:19,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:19,836 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:19,963 | INFO     | [job] validate thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:19,987 | INFO     | all job control threads have been joined
[2025-11-26 11:17:49] 2025-11-26 10:17:20,126 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:20,173 | INFO     | [data] control thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:20,294 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:20,361 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:20,501 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:20,792 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:20,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:17:49] 2025-11-26 10:17:20,990 | INFO     | [job] control thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:20,993 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:24,954 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:17:49] 2025-11-26 10:17:33,145 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:17:49] 2025-11-26 10:17:34,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682244343616)>', '<ExcThread(monitor, started 139681689741056)>']
[2025-11-26 11:17:49] 2025-11-26 10:17:39,700 | INFO     | all workflow threads have been joined
[2025-11-26 11:17:49] 2025-11-26 10:17:39,700 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:17:49] 2025-11-26 10:17:39,701 | INFO     | traces error code: 0
[2025-11-26 11:17:49] 2025-11-26 10:17:39,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:17:49] 2025-11-26 10:17:48,776 | INFO     | PID=2155650 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:17:49] 2025-11-26 10:17:48,777 | INFO     | .. there are 2 such processes running
[2025-11-26 11:17:49] 2025-11-26 10:17:48,778 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:17:49] 2025-11-26 10:17:48,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:17:49] 2025-11-26 10:17:48,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:17:49] 2025-11-26 10:17:48,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:17:49] 2025-11-26 10:17:48,778 | INFO     | [monitor] control thread has ended
[2025-11-26 11:17:49] 2025-11-26 10:17:48,906 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:17:49] 2025-11-26 10:17:48,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:17:49] 2025-11-26 10:17:48,911 [wrapper] pilotpid: 2155650
[2025-11-26 11:17:49] 2025-11-26 10:17:48,914 [wrapper] Pilot exit status: 0
[2025-11-26 11:17:49] 2025-11-26 10:17:48,923 [wrapper] pandaids: 6895418031
[2025-11-26 11:17:49] 2025-11-26 10:17:48,960 [wrapper] cleanup supervisor_pilot 2401999 2155651
[2025-11-26 11:17:49] 2025-11-26 10:17:48,962 [wrapper] Test setup, not cleaning
[2025-11-26 11:17:49] 2025-11-26 10:17:48,965 [wrapper] apfmon messages muted
[2025-11-26 11:17:49] 2025-11-26 10:17:48,968 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:17:49] 2025-11-26 10:17:48,970 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:17:49]  *** Error codes and diagnostics ***
[2025-11-26 11:17:49]     "exeErrorCode": 0,
[2025-11-26 11:17:49]     "exeErrorDiag": "",
[2025-11-26 11:17:49]     "pilotErrorCode": 0,
[2025-11-26 11:17:49]     "pilotErrorDiag": "",
[2025-11-26 11:17:49]  *** Listing of results directory ***
[2025-11-26 11:17:49] total 1316096
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc    576529 Nov 24 09:46 pilot3.tar.gz
[2025-11-26 11:17:49] -rwx------ 1 boinc boinc     36292 Nov 24 09:53 runpilot2-wrapper.sh
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc      5112 Nov 24 09:53 queuedata.json
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc       100 Nov 25 23:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:17:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 23:16 run_atlas
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc       105 Nov 25 23:16 job.xml
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc      6296 Nov 25 23:16 init_data.xml
[2025-11-26 11:17:49] -rw-r--r-- 2 boinc boinc 411005443 Nov 25 23:16 EVNT.47483658._001282.pool.root.1
[2025-11-26 11:17:49] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:16 start_atlas.sh
[2025-11-26 11:17:49] drwxrwx--x 2 boinc boinc        68 Nov 25 23:16 shared
[2025-11-26 11:17:49] -rw-r--r-- 2 boinc boinc    590104 Nov 25 23:16 input.tar.gz
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc         0 Nov 25 23:16 boinc_lockfile
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc      2786 Nov 25 23:16 pandaJob.out
[2025-11-26 11:17:49] -rw------- 1 boinc boinc    991877 Nov 25 23:16 agis_schedconf.cvmfs.json
[2025-11-26 11:17:49] drwx------ 5 boinc boinc      4096 Nov 25 23:16 pilot3
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc       533 Nov 26 11:05 boinc_task_state.xml
[2025-11-26 11:17:49] -rw------- 1 boinc boinc 915972605 Nov 26 11:16 HITS.47556149._002684.pool.root.1
[2025-11-26 11:17:49] -rw------- 1 boinc boinc      1035 Nov 26 11:17 memory_monitor_summary.json
[2025-11-26 11:17:49] -rw------- 1 boinc boinc   1516240 Nov 26 11:17 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:17:49] -rw------- 1 boinc boinc   2410193 Nov 26 11:17 log.47556149._002684.job.log.tgz.1
[2025-11-26 11:17:49] -rw------- 1 boinc boinc        95 Nov 26 11:17 pilot_heartbeat.json
[2025-11-26 11:17:49] -rw------- 1 boinc boinc      8611 Nov 26 11:17 heartbeat.json
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc      8192 Nov 26 11:17 boinc_mmap_file
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc        29 Nov 26 11:17 wrapper_checkpoint.txt
[2025-11-26 11:17:49] -rw------- 1 boinc boinc       822 Nov 26 11:17 pilotlog.txt
[2025-11-26 11:17:49] -rw------- 1 boinc boinc   5989625 Nov 26 11:17 log.47556149._002684.job.log.1
[2025-11-26 11:17:49] -rw------- 1 boinc boinc       353 Nov 26 11:17 output.list
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc       620 Nov 26 11:17 runtime_log
[2025-11-26 11:17:49] -rw------- 1 boinc boinc   8417280 Nov 26 11:17 result.tar.gz
[2025-11-26 11:17:49] -rw------- 1 boinc boinc       665 Nov 26 11:17 UOrNDmrUhh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNzIKDm30972n.diag
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc      8842 Nov 26 11:17 runtime_log.err
[2025-11-26 11:17:49] -rw-r--r-- 1 boinc boinc     21417 Nov 26 11:17 stderr.txt
[2025-11-26 11:17:49] HITS file was successfully produced:
[2025-11-26 11:17:49] -rw------- 1 boinc boinc 915972605 Nov 26 11:16 shared/HITS.pool.root.1
[2025-11-26 11:17:49]  *** Contents of shared directory: ***
[2025-11-26 11:17:49] total 1304700
[2025-11-26 11:17:49] -rw-r--r-- 2 boinc boinc 411005443 Nov 25 23:16 ATLAS.root_0
[2025-11-26 11:17:49] -rw-r--r-- 2 boinc boinc     15847 Nov 25 23:16 start_atlas.sh
[2025-11-26 11:17:49] -rw-r--r-- 2 boinc boinc    590104 Nov 25 23:16 input.tar.gz
[2025-11-26 11:17:49] -rw------- 1 boinc boinc 915972605 Nov 26 11:16 HITS.pool.root.1
[2025-11-26 11:17:49] -rw------- 1 boinc boinc   8417280 Nov 26 11:17 result.tar.gz
11:17:50 (2151817): run_atlas exited; CPU time 503984.853012
11:17:50 (2151817): called boinc_finish(0)

</stderr_txt>
]]>

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