Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:46:49 (1123711): wrapper (7.7.26015): starting
03:46:49 (1123711): wrapper: running run_atlas (--nthreads 3)
[2025-11-29 03:46:49] Arguments: --nthreads 3
[2025-11-29 03:46:49] Threads: 3
[2025-11-29 03:46:49] Checking for CVMFS
[2025-11-29 03:46:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 03:46:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 03:46:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 03:46:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 03:46:49] 2.9.2.0 541886 2416 72244 153426 3 81 35776436 36864000 0 130560 0 894066 99.980 87454 428 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-29 03:46:49] CVMFS is ok
[2025-11-29 03:46:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 03:46:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 03:46:49] Further information can be found at the LHC@home message board.
[2025-11-29 03:46:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 03:46:49] Checking for apptainer binary...
[2025-11-29 03:46:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 03:46:49] Running /usr/bin/apptainer --version
[2025-11-29 03:46:49] apptainer version 1.4.1-1.1
[2025-11-29 03:46:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 03:46:49] atlasA230
[2025-11-29 03:46:49] apptainer works
[2025-11-29 03:46:49] Set ATHENA_PROC_NUMBER=3
[2025-11-29 03:46:49] Set ATHENA_CORE_NUMBER=3
[2025-11-29 03:46:49] Starting ATLAS job with PandaID=6895475291
[2025-11-29 03:46:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 11:43:57]  *** The last 200 lines of the pilot log: ***
[2025-11-29 11:43:57] 2025-11-29 10:43:28,012 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 11:43:57] 2025-11-29 10:43:28,093 | INFO     | [payload] validate_post thread has finished
[2025-11-29 11:43:57] 2025-11-29 10:43:28,363 | INFO     | [data] copytool_out thread has finished
[2025-11-29 11:43:57] 2025-11-29 10:43:28,382 | INFO     | [job] control thread has finished
[2025-11-29 11:43:57] 2025-11-29 10:43:29,551 | INFO     | [monitor] cgroup control has ended
[2025-11-29 11:43:57] 2025-11-29 10:43:31,374 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 11:43:57] 2025-11-29 10:43:36,418 | INFO     | job.realtimelogging is not enabled
[2025-11-29 11:43:57] 2025-11-29 10:43:37,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 11:43:57] 2025-11-29 10:43:38,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139978334218048)>', '<ExcThread(monitor, started 139977983768320)>']
[2025-11-29 11:43:57] 2025-11-29 10:43:43,144 | INFO     | all workflow threads have been joined
[2025-11-29 11:43:57] 2025-11-29 10:43:43,145 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 11:43:57] 2025-11-29 10:43:43,145 | INFO     | traces error code: 0
[2025-11-29 11:43:57] 2025-11-29 10:43:43,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 11:43:57] 2025-11-29 10:43:57,419 | INFO     | PID=1127438 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 11:43:57] 2025-11-29 10:43:57,419 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 11:43:57] 2025-11-29 10:43:57,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 11:43:57] 2025-11-29 10:43:57,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 11:43:57] 2025-11-29 10:43:57,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 11:43:57] 2025-11-29 10:43:57,419 | INFO     | [monitor] control thread has ended
[2025-11-29 11:43:57] 2025-11-29 10:43:57,467 [wrapper] ==== pilot stdout END ====
[2025-11-29 11:43:57] 2025-11-29 10:43:57,470 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 11:43:57] 2025-11-29 10:43:57,472 [wrapper] pilotpid: 1127438
[2025-11-29 11:43:57] 2025-11-29 10:43:57,474 [wrapper] Pilot exit status: 0
[2025-11-29 11:43:57] 2025-11-29 10:43:57,481 [wrapper] pandaids: 6895475291
[2025-11-29 11:43:57] 2025-11-29 10:43:57,500 [wrapper] cleanup supervisor_pilot 1236050 1127439
[2025-11-29 11:43:57] 2025-11-29 10:43:57,503 [wrapper] Test setup, not cleaning
[2025-11-29 11:43:57] 2025-11-29 10:43:57,505 [wrapper] apfmon messages muted
[2025-11-29 11:43:57] 2025-11-29 10:43:57,507 [wrapper] ==== wrapper stdout END ====
[2025-11-29 11:43:57] 2025-11-29 10:43:57,509 [wrapper] ==== wrapper stderr END ====
[2025-11-29 11:43:57]  *** Error codes and diagnostics ***
[2025-11-29 11:43:57]     "exeErrorCode": 0,
[2025-11-29 11:43:57]     "exeErrorDiag": "",
[2025-11-29 11:43:57]     "pilotErrorCode": 0,
[2025-11-29 11:43:57]     "pilotErrorDiag": "",
[2025-11-29 11:43:57]  *** Listing of results directory ***
[2025-11-29 11:43:57] total 1311272
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc    576529 Nov 24 09:46 pilot3.tar.gz
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc      5112 Nov 24 09:58 queuedata.json
[2025-11-29 11:43:57] -rwx------ 1 boinc boinc     36292 Nov 24 09:59 runpilot2-wrapper.sh
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc       100 Nov 29 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 11:43:57] -rwxr-xr-x 1 boinc boinc      7986 Nov 29 03:46 run_atlas
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc       105 Nov 29 03:46 job.xml
[2025-11-29 11:43:57] -rw-r--r-- 2 boinc boinc 409169502 Nov 29 03:46 EVNT.47483658._001286.pool.root.1
[2025-11-29 11:43:57] drwxrwx--x 2 boinc boinc      4096 Nov 29 03:46 shared
[2025-11-29 11:43:57] -rw-r--r-- 2 boinc boinc    590104 Nov 29 03:46 input.tar.gz
[2025-11-29 11:43:57] -rw-r--r-- 2 boinc boinc     15847 Nov 29 03:46 start_atlas.sh
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc         0 Nov 29 03:46 boinc_setup_complete
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc      6443 Nov 29 03:46 init_data.xml
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc         0 Nov 29 03:46 boinc_lockfile
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc      2785 Nov 29 03:46 pandaJob.out
[2025-11-29 11:43:57] -rw------- 1 boinc boinc    991834 Nov 29 03:46 agis_schedconf.cvmfs.json
[2025-11-29 11:43:57] drwx------ 5 boinc boinc      4096 Nov 29 03:46 pilot3
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc       531 Nov 29 11:40 boinc_task_state.xml
[2025-11-29 11:43:57] -rw------- 1 boinc boinc 919308947 Nov 29 11:43 HITS.47556149._002730.pool.root.1
[2025-11-29 11:43:57] -rw------- 1 boinc boinc      1029 Nov 29 11:43 memory_monitor_summary.json
[2025-11-29 11:43:57] -rw------- 1 boinc boinc   1516240 Nov 29 11:43 agis_ddmendpoints.agis.ALL.json
[2025-11-29 11:43:57] -rw------- 1 boinc boinc   1166556 Nov 29 11:43 log.47556149._002730.job.log.tgz.1
[2025-11-29 11:43:57] -rw------- 1 boinc boinc      8571 Nov 29 11:43 heartbeat.json
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc      8192 Nov 29 11:43 boinc_mmap_file
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc        28 Nov 29 11:43 wrapper_checkpoint.txt
[2025-11-29 11:43:57] -rw------- 1 boinc boinc       747 Nov 29 11:43 pilotlog.txt
[2025-11-29 11:43:57] -rw------- 1 boinc boinc        95 Nov 29 11:43 pilot_heartbeat.json
[2025-11-29 11:43:57] -rw------- 1 boinc boinc   4018973 Nov 29 11:43 log.47556149._002730.job.log.1
[2025-11-29 11:43:57] -rw------- 1 boinc boinc       353 Nov 29 11:43 output.list
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc       620 Nov 29 11:43 runtime_log
[2025-11-29 11:43:57] -rw------- 1 boinc boinc   5201920 Nov 29 11:43 result.tar.gz
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc      8913 Nov 29 11:43 runtime_log.err
[2025-11-29 11:43:57] -rw------- 1 boinc boinc       668 Nov 29 11:43 MXQLDmBbhh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBZLKDm7Sb4sm.diag
[2025-11-29 11:43:57] -rw-r--r-- 1 boinc boinc      5407 Nov 29 11:43 stderr.txt
[2025-11-29 11:43:57] HITS file was successfully produced:
[2025-11-29 11:43:57] -rw------- 1 boinc boinc 919308947 Nov 29 11:43 shared/HITS.pool.root.1
[2025-11-29 11:43:57]  *** Contents of shared directory: ***
[2025-11-29 11:43:57] total 1303028
[2025-11-29 11:43:57] -rw-r--r-- 2 boinc boinc 409169502 Nov 29 03:46 ATLAS.root_0
[2025-11-29 11:43:57] -rw-r--r-- 2 boinc boinc    590104 Nov 29 03:46 input.tar.gz
[2025-11-29 11:43:57] -rw-r--r-- 2 boinc boinc     15847 Nov 29 03:46 start_atlas.sh
[2025-11-29 11:43:57] -rw------- 1 boinc boinc 919308947 Nov 29 11:43 HITS.pool.root.1
[2025-11-29 11:43:57] -rw------- 1 boinc boinc   5201920 Nov 29 11:43 result.tar.gz
11:43:59 (1123711): run_atlas exited; CPU time 84539.977667
11:43:59 (1123711): called boinc_finish(0)

</stderr_txt>
]]>

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