Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:56:19 (2600181): wrapper (7.7.26015): starting
22:56:19 (2600181): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 22:56:19] Arguments: --nthreads 12
[2025-11-24 22:56:19] Threads: 12
[2025-11-24 22:56:19] Checking for CVMFS
[2025-11-24 22:56:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:56:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:56:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:56:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:56:21] 2.11.5.0 2081521 26570 194084 153273 1 143 39464741 45568001 15103 130560 0 172406617 99.790 106891033 19197 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 22:56:21] CVMFS is ok
[2025-11-24 22:56:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:56:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:56:21] Further information can be found at the LHC@home message board.
[2025-11-24 22:56:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:56:21] Checking for apptainer binary...
[2025-11-24 22:56:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:56:21] Running /usr/bin/apptainer --version
[2025-11-24 22:56:22] apptainer version 1.4.1-1.el9
[2025-11-24 22:56:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:56:22] wns0041.triumf.lcg
[2025-11-24 22:56:22] apptainer works
[2025-11-24 22:56:22] Set ATHENA_PROC_NUMBER=12
[2025-11-24 22:56:22] Set ATHENA_CORE_NUMBER=12
[2025-11-24 22:56:22] Starting ATLAS job with PandaID=6895386446
[2025-11-24 22:56:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:05:19]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | . Timing measurements:
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | . get job = 0 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | . initial setup = 6 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . payload setup = 26 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . stage-in = 0 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . payload execution = 214 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . stage-out = 2 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | . log creation = 0 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | ..............................
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895386446/pilotlog.txt
[2025-11-24 23:05:19] 2025-11-25 07:04:23,758 | INFO     | monitor loop #90: job 0:6895386446 is in state 'failed'
[2025-11-24 23:05:19] 2025-11-25 07:04:23,758 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-24 23:05:19] 2025-11-25 07:04:23,824 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 23:05:19] - Log from pilotlog.txt -
[2025-11-24 23:05:19] 2025-11-25 07:04:23,664 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:05:19] 2025-11-25 07:04:23,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:05:19] 2025-11-25 07:04:23,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 23:05:19] 2025-11-25 07:04:23,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 23:05:19] 2025-11-25 07:04:23,667 | WARNING  | wrong length of table data, x=[1764053927.0, 1764053988.0, 1764054049.0, 1764054110.0], y=[2662.0, 439685.0, 368211.0, 251147.0] (must be same and length>=4)
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | could have reported an average CPU frequency of 1303 MHz (4 samples)
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | ..............................
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | . Timing measurements:
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | . get job = 0 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | . initial setup = 6 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . payload setup = 26 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . stage-in = 0 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . payload execution = 214 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . stage-out = 2 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | . log creation = 0 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | ..............................
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895386446/pilotlog.txt
[2025-11-24 23:05:19] 2025-11-25 07:04:23,758 | INFO     | monitor loop #90: job 0:6895386446 is in state 'failed'
[2025-11-24 23:05:19] 2025-11-25 07:04:23,758 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-24 23:05:19] 2025-11-25 07:04:23,825 | WARNING  | 
[2025-11-24 23:05:19] [begin log extracts]
[2025-11-24 23:05:19] - Log from pilotlog.txt -
[2025-11-24 23:05:19] 2025-11-25 07:04:23,664 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:05:19] 2025-11-25 07:04:23,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:05:19] 2025-11-25 07:04:23,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 23:05:19] 2025-11-25 07:04:23,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 23:05:19] 2025-11-25 07:04:23,667 | WARNING  | wrong length of table data, x=[1764053927.0, 1764053988.0, 1764054049.0, 1764054110.0], y=[2662.0, 439685.0, 368211.0, 251147.0] (must be same and length>=4)
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | could have reported an average CPU frequency of 1303 MHz (4 samples)
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | ..............................
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | . Timing measurements:
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | . get job = 0 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,669 | INFO     | . initial setup = 6 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . payload setup = 26 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . stage-in = 0 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . payload execution = 214 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,670 | INFO     | . stage-out = 2 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | . log creation = 0 s
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | ..............................
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 23:05:19] 2025-11-25 07:04:23,671 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895386446/pilotlog.txt
[2025-11-24 23:05:19] 2025-11-25 07:04:23,758 | INFO     | monitor loop #90: job 0:6895386446 is in state 'failed'
[2025-11-24 23:05:19] 2025-11-25 07:04:23,758 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-24 23:05:19] [end log extracts]
[2025-11-24 23:05:19] 2025-11-25 07:04:23,825 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 23:05:19] 2025-11-25 07:04:23,826 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 23:05:19] 2025-11-25 07:04:23,916 | INFO     | PID=2603876 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:05:19] 2025-11-25 07:04:23,916 | INFO     | .. there are 21 such processes running
[2025-11-24 23:05:19] 2025-11-25 07:04:24,533 | INFO     | 
[2025-11-24 23:05:19] 2025-11-25 07:04:24,533 | INFO     | job summary report
[2025-11-24 23:05:19] 2025-11-25 07:04:24,534 | INFO     | --------------------------------------------------
[2025-11-24 23:05:19] 2025-11-25 07:04:24,534 | INFO     | PanDA job id: 6895386446
[2025-11-24 23:05:19] 2025-11-25 07:04:24,534 | INFO     | task id: 47556149
[2025-11-24 23:05:19] 2025-11-25 07:04:24,534 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 23:01:48,530 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 23:05:19] 2025-11-25 07:04:24,534 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 23:05:19] 2025-11-25 07:04:24,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:05:19] 2025-11-25 07:04:24,534 | INFO     | pilot state: failed 
[2025-11-24 23:05:19] 2025-11-25 07:04:24,534 | INFO     | transexitcode: 65
[2025-11-24 23:05:19] 2025-11-25 07:04:24,534 | INFO     | exeerrorcode: 65
[2025-11-24 23:05:19] 2025-11-25 07:04:24,535 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 23:05:19] 2025-11-25 07:04:24,535 | INFO     | exitcode: 65
[2025-11-24 23:05:19] 2025-11-25 07:04:24,535 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 23:05:19] 2025-11-25 07:04:24,535 | INFO     | cpuconsumptiontime: 81 s
[2025-11-24 23:05:19] 2025-11-25 07:04:24,535 | INFO     | nevents: 0
[2025-11-24 23:05:19] 2025-11-25 07:04:24,535 | INFO     | neventsw: 0
[2025-11-24 23:05:19] 2025-11-25 07:04:24,535 | INFO     | pid: 2610566
[2025-11-24 23:05:19] 2025-11-25 07:04:24,535 | INFO     | pgrp: 2610566
[2025-11-24 23:05:19] 2025-11-25 07:04:24,535 | INFO     | corecount: 12
[2025-11-24 23:05:19] 2025-11-25 07:04:24,536 | INFO     | event service: False
[2025-11-24 23:05:19] 2025-11-25 07:04:24,536 | INFO     | sizes: {0: 2283481, 1: 2284334, 2: 2284334, 13: 2284362, 20: 2284680, 25: 2284708, 246: 2310313, 247: 2310289, 250: 2314607, 251: 2314635, 392: 2314829}
[2025-11-24 23:05:19] 2025-11-25 07:04:24,536 | INFO     | --------------------------------------------------
[2025-11-24 23:05:19] 2025-11-25 07:04:24,536 | INFO     | 
[2025-11-24 23:05:19] 2025-11-25 07:04:24,536 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 23:05:19] 2025-11-25 07:04:24,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,575 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,575 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,575 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:05:19] 2025-11-25 07:04:24,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:05:19] 2025-11-25 07:04:24,575 | INFO     | job 6895386446 has completed (purged errors)
[2025-11-24 23:05:19] 2025-11-25 07:04:24,576 | INFO     | overall cleanup function is called
[2025-11-24 23:05:19] 2025-11-25 07:04:25,587 | INFO     | --- collectZombieJob: --- 10, [2610566]
[2025-11-24 23:05:19] 2025-11-25 07:04:25,587 | INFO     | zombie collector waiting for pid 2610566
[2025-11-24 23:05:19] 2025-11-25 07:04:25,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:05:19] 2025-11-25 07:04:25,587 | INFO     | collected zombie processes
[2025-11-24 23:05:19] 2025-11-25 07:04:25,588 | INFO     | will attempt to kill all subprocesses of pid=2610566
[2025-11-24 23:05:19] 2025-11-25 07:04:26,879 | INFO     | process IDs to be killed: [2610566] (in reverse order)
[2025-11-24 23:05:19] 2025-11-25 07:04:27,005 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:05:19] 2025-11-25 07:04:27,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:05:19] 2025-11-25 07:04:27,020 | INFO     | did not find any defunct processes belonging to 2610566
[2025-11-24 23:05:19] 2025-11-25 07:04:27,035 | INFO     | did not find any defunct processes belonging to 2610566
[2025-11-24 23:05:19] 2025-11-25 07:04:27,038 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:05:19] 2025-11-25 07:04:27,038 | INFO     | ready for new job
[2025-11-24 23:05:19] 2025-11-25 07:04:27,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:05:19] 2025-11-25 07:04:27,041 | INFO     | ***************************************
[2025-11-24 23:05:19] 2025-11-25 07:04:27,041 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:05:19] 2025-11-25 07:04:27,041 | INFO     | ***************************************
[2025-11-24 23:05:19] 2025-11-25 07:04:27,041 | INFO     | 
[2025-11-24 23:05:19] 2025-11-25 07:04:27,045 | INFO     | architecture information:
[2025-11-24 23:05:19] 2025-11-25 07:04:27,049 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:05:19] 2025-11-25 07:04:27,073 | INFO     | cat /etc/os-release:
[2025-11-24 23:05:19] NAME="CentOS Linux"
[2025-11-24 23:05:19] VERSION="7 (Core)"
[2025-11-24 23:05:19] ID="centos"
[2025-11-24 23:05:19] ID_LIKE="rhel fedora"
[2025-11-24 23:05:19] VERSION_ID="7"
[2025-11-24 23:05:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:05:19] ANSI_COLOR="0;31"
[2025-11-24 23:05:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:05:19] HOME_URL="https://www.centos.org/"
[2025-11-24 23:05:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:05:19] 
[2025-11-24 23:05:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:05:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:05:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:05:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:05:19] 
[2025-11-24 23:05:19] 2025-11-25 07:04:27,074 | INFO     | ***************************************
[2025-11-24 23:05:19] 2025-11-25 07:04:27,577 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 23:05:19] 2025-11-25 07:04:27,664 | INFO     | sufficient remaining disk space (1835972689920 B)
[2025-11-24 23:05:19] 2025-11-25 07:04:27,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:05:19] 2025-11-25 07:04:27,665 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:05:19] 2025-11-25 07:04:27,665 | INFO     | update_server=False
[2025-11-24 23:05:19] 2025-11-25 07:04:27,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:05:19] 2025-11-25 07:04:27,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:05:19] 2025-11-25 07:04:27,667 | INFO     | aborting loop
[2025-11-24 23:05:19] 2025-11-25 07:04:28,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:05:19] 2025-11-25 07:04:28,206 | INFO     | all job control threads have been joined
[2025-11-24 23:05:19] 2025-11-25 07:04:28,301 | INFO     | all data control threads have been joined
[2025-11-24 23:05:19] 2025-11-25 07:04:28,671 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:28,673 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:28,715 | INFO     | all payload control threads have been joined
[2025-11-24 23:05:19] 2025-11-25 07:04:29,010 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:29,212 | INFO     | [job] control thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:29,307 | INFO     | [data] control thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:29,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:05:19] 2025-11-25 07:04:29,551 | INFO     | [job] validate thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:29,553 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:29,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:05:19] 2025-11-25 07:04:29,726 | INFO     | [payload] control thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:29,889 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:29,931 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:30,032 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:30,101 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:30,106 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:30,172 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:30,541 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:33,603 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:05:19] 2025-11-25 07:04:56,634 | INFO     | PID=2603876 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:05:19] 2025-11-25 07:04:56,634 | INFO     | .. there are 21 such processes running
[2025-11-24 23:05:19] 2025-11-25 07:04:56,635 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:05:19] 2025-11-25 07:04:56,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:05:19] 2025-11-25 07:04:56,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:05:19] 2025-11-25 07:05:11,525 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:05:19] 2025-11-25 07:05:13,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238796687168)>', '<ExcThread(monitor, started 140238122903296)>']
[2025-11-24 23:05:19] 2025-11-25 07:05:13,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:05:19] 2025-11-25 07:05:13,739 | INFO     | [monitor] control thread has ended
[2025-11-24 23:05:19] 2025-11-25 07:05:18,386 | INFO     | all workflow threads have been joined
[2025-11-24 23:05:19] 2025-11-25 07:05:18,386 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:05:19] 2025-11-25 07:05:18,387 | INFO     | traces error code: 0
[2025-11-24 23:05:19] 2025-11-25 07:05:18,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:05:19] 2025-11-25 07:05:18,625 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:05:19] 2025-11-25 07:05:18,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:05:19] 2025-11-25 07:05:18,632 [wrapper] pilotpid: 2603876
[2025-11-24 23:05:19] 2025-11-25 07:05:18,636 [wrapper] Pilot exit status: 0
[2025-11-24 23:05:19] 2025-11-25 07:05:18,655 [wrapper] pandaids: 6895386446
[2025-11-24 23:05:19] 2025-11-25 07:05:18,780 [wrapper] cleanup supervisor_pilot 2603882 2603877
[2025-11-24 23:05:19] 2025-11-25 07:05:18,792 [wrapper] Test setup, not cleaning
[2025-11-24 23:05:19] 2025-11-25 07:05:18,807 [wrapper] apfmon messages muted
[2025-11-24 23:05:19] 2025-11-25 07:05:18,822 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:05:19] 2025-11-25 07:05:18,838 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:05:19]  *** Error codes and diagnostics ***
[2025-11-24 23:05:19]     "exeErrorCode": 65,
[2025-11-24 23:05:19]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 23:05:19]     "pilotErrorCode": 1305,
[2025-11-24 23:05:19]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 23:05:19]  *** Listing of results directory ***
[2025-11-24 23:05:19] total 404124
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc    576529 Nov 23 21:14 pilot3.tar.gz
[2025-11-24 23:05:19] -rwx------. 1 boinc boinc     36292 Nov 23 21:17 runpilot2-wrapper.sh
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc      5112 Nov 23 21:17 queuedata.json
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc       100 Nov 24 22:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:05:19] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 22:56 run_atlas
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc       105 Nov 24 22:56 job.xml
[2025-11-24 23:05:19] -rw-r--r--. 2 boinc boinc 409564027 Nov 24 22:56 EVNT.47483658._001243.pool.root.1
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc      6595 Nov 24 22:56 init_data.xml
[2025-11-24 23:05:19] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:56 start_atlas.sh
[2025-11-24 23:05:19] drwxrwx--x. 2 boinc boinc      4096 Nov 24 22:56 shared
[2025-11-24 23:05:19] -rw-r--r--. 2 boinc boinc    590102 Nov 24 22:56 input.tar.gz
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc         0 Nov 24 22:56 boinc_lockfile
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc      2785 Nov 24 22:56 pandaJob.out
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc    991801 Nov 24 22:57 agis_schedconf.cvmfs.json
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc   1516227 Nov 24 22:57 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:05:19] drwx------. 5 boinc boinc      4096 Nov 24 22:57 pilot3
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc       524 Nov 24 23:00 boinc_task_state.xml
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc      1007 Nov 24 23:01 memory_monitor_summary.json
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc     50699 Nov 24 23:01 log.47556149._002299.job.log.tgz.1
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc        95 Nov 24 23:04 pilot_heartbeat.json
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc     10344 Nov 24 23:04 heartbeat.json
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc      4823 Nov 24 23:05 pilotlog.txt
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc    118214 Nov 24 23:05 log.47556149._002299.job.log.1
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc       186 Nov 24 23:05 output.list
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc       620 Nov 24 23:05 runtime_log
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc    194560 Nov 24 23:05 result.tar.gz
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc      8636 Nov 24 23:05 runtime_log.err
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc       647 Nov 24 23:05 jw0MDm67dh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWTLKDmkI13Do.diag
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc      8192 Nov 24 23:05 boinc_mmap_file
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc        23 Nov 24 23:05 wrapper_checkpoint.txt
[2025-11-24 23:05:19] -rw-r--r--. 1 boinc boinc     20608 Nov 24 23:05 stderr.txt
[2025-11-24 23:05:19] No HITS result produced
[2025-11-24 23:05:19]  *** Contents of shared directory: ***
[2025-11-24 23:05:19] total 400760
[2025-11-24 23:05:19] -rw-r--r--. 2 boinc boinc 409564027 Nov 24 22:56 ATLAS.root_0
[2025-11-24 23:05:19] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:56 start_atlas.sh
[2025-11-24 23:05:19] -rw-r--r--. 2 boinc boinc    590102 Nov 24 22:56 input.tar.gz
[2025-11-24 23:05:19] -rw-------. 1 boinc boinc    194560 Nov 24 23:05 result.tar.gz
23:05:21 (2600181): run_atlas exited; CPU time 84.286222
23:05:21 (2600181): called boinc_finish(0)

</stderr_txt>
]]>

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