Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:16:43 (3726408): wrapper (7.7.26015): starting
08:16:43 (3726408): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 08:16:43] Arguments: --nthreads 3
[2025-11-25 08:16:43] Threads: 3
[2025-11-25 08:16:43] Checking for CVMFS
[2025-11-25 08:16:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:16:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:16:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:16:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:16:43] 2.9.2.0 3559337 43 58520 153275 0 85 35130844 36864000 0 130560 0 500895 99.999 3882 32082 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 08:16:43] CVMFS is ok
[2025-11-25 08:16:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:16:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:16:43] Further information can be found at the LHC@home message board.
[2025-11-25 08:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:16:43] Checking for apptainer binary...
[2025-11-25 08:16:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:16:43] Running /usr/bin/apptainer --version
[2025-11-25 08:16:43] apptainer version 1.4.1-1.1
[2025-11-25 08:16:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:16:43] thA335
[2025-11-25 08:16:43] apptainer works
[2025-11-25 08:16:43] Set ATHENA_PROC_NUMBER=3
[2025-11-25 08:16:43] Set ATHENA_CORE_NUMBER=3
[2025-11-25 08:16:43] Starting ATLAS job with PandaID=6895475293
[2025-11-25 08:16:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 08:21:02]  *** The last 200 lines of the pilot log: ***
[2025-11-25 08:21:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 08:21:02] 
[2025-11-25 08:21:02] 2025-11-25 07:20:09,498 | INFO     | ***************************************
[2025-11-25 08:21:02] 2025-11-25 07:20:10,001 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 08:21:02] 2025-11-25 07:20:10,015 | INFO     | sufficient remaining disk space (826484457472 B)
[2025-11-25 08:21:02] 2025-11-25 07:20:10,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 08:21:02] 2025-11-25 07:20:10,015 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 08:21:02] 2025-11-25 07:20:10,016 | INFO     | update_server=False
[2025-11-25 08:21:02] 2025-11-25 07:20:10,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 08:21:02] 2025-11-25 07:20:10,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:21:02] 2025-11-25 07:20:10,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:21:02] 2025-11-25 07:20:10,016 | INFO     | aborting loop
[2025-11-25 08:21:02] 2025-11-25 07:20:10,244 | INFO     | all job control threads have been joined
[2025-11-25 08:21:02] 2025-11-25 07:20:10,275 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 08:21:02] 2025-11-25 07:20:11,021 | INFO     | [job] queue monitor thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:11,022 | INFO     | [job] retrieve thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:11,023 | INFO     | [job] job monitor thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:11,073 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:11,102 | INFO     | all data control threads have been joined
[2025-11-25 08:21:02] 2025-11-25 07:20:11,251 | INFO     | [job] control thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:11,405 | INFO     | all payload control threads have been joined
[2025-11-25 08:21:02] 2025-11-25 07:20:11,551 | INFO     | [payload] failed_post thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:11,706 | INFO     | [data] copytool_in thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:12,025 | INFO     | [payload] validate_post thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:12,108 | INFO     | [data] control thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:12,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:12,281 | INFO     | [data] copytool_out thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:12,392 | INFO     | [job] validate thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:12,411 | INFO     | [payload] control thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:12,465 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:12,522 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:13,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 08:21:02] 2025-11-25 07:20:17,087 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 08:21:02] 2025-11-25 07:20:40,692 | INFO     | PID=3730135 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 08:21:02] 2025-11-25 07:20:40,693 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 08:21:02] 2025-11-25 07:20:40,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 08:21:02] 2025-11-25 07:20:40,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 08:21:02] 2025-11-25 07:20:55,672 | INFO     | [monitor] cgroup control has ended
[2025-11-25 08:21:02] 2025-11-25 07:20:56,867 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017500768064)>', '<ExcThread(monitor, started 140016730760960)>']
[2025-11-25 08:21:02] 2025-11-25 07:20:57,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 08:21:02] 2025-11-25 07:20:57,783 | INFO     | [monitor] control thread has ended
[2025-11-25 08:21:02] 2025-11-25 07:21:01,887 | INFO     | all workflow threads have been joined
[2025-11-25 08:21:02] 2025-11-25 07:21:01,888 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 08:21:02] 2025-11-25 07:21:01,888 | INFO     | traces error code: 0
[2025-11-25 08:21:02] 2025-11-25 07:21:01,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 08:21:02] 2025-11-25 07:21:01,934 [wrapper] ==== pilot stdout END ====
[2025-11-25 08:21:02] 2025-11-25 07:21:01,937 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 08:21:02] 2025-11-25 07:21:01,940 [wrapper] pilotpid: 3730135
[2025-11-25 08:21:02] 2025-11-25 07:21:01,943 [wrapper] Pilot exit status: 0
[2025-11-25 08:21:02] 2025-11-25 07:21:01,950 [wrapper] pandaids: 6895475293
[2025-11-25 08:21:02] 2025-11-25 07:21:01,967 [wrapper] cleanup supervisor_pilot 3730141 3730136
[2025-11-25 08:21:02] 2025-11-25 07:21:01,970 [wrapper] Test setup, not cleaning
[2025-11-25 08:21:02] 2025-11-25 07:21:01,972 [wrapper] apfmon messages muted
[2025-11-25 08:21:02] 2025-11-25 07:21:01,975 [wrapper] ==== wrapper stdout END ====
[2025-11-25 08:21:02] 2025-11-25 07:21:01,977 [wrapper] ==== wrapper stderr END ====
[2025-11-25 08:21:02]  *** Error codes and diagnostics ***
[2025-11-25 08:21:02]     "exeErrorCode": 65,
[2025-11-25 08:21:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 08:21:02]     "pilotErrorCode": 1305,
[2025-11-25 08:21:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 08:21:02]  *** Listing of results directory ***
[2025-11-25 08:21:02] total 405808
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc      5112 Nov 24 10:01 queuedata.json
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc    576529 Nov 24 10:01 pilot3.tar.gz
[2025-11-25 08:21:02] -rwx------ 1 boinc boinc     36292 Nov 24 10:02 runpilot2-wrapper.sh
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc       100 Nov 25 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 08:21:02] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 08:16 run_atlas
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc       105 Nov 25 08:16 job.xml
[2025-11-25 08:21:02] -rw-r--r-- 2 boinc boinc 411346600 Nov 25 08:16 EVNT.47483658._001287.pool.root.1
[2025-11-25 08:21:02] -rw-r--r-- 2 boinc boinc    590103 Nov 25 08:16 input.tar.gz
[2025-11-25 08:21:02] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:16 start_atlas.sh
[2025-11-25 08:21:02] drwxrwx--x 2 boinc boinc      4096 Nov 25 08:16 shared
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc         0 Nov 25 08:16 boinc_setup_complete
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc      6196 Nov 25 08:16 init_data.xml
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc         0 Nov 25 08:16 boinc_lockfile
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc      2785 Nov 25 08:16 pandaJob.out
[2025-11-25 08:21:02] -rw------- 1 boinc boinc    991830 Nov 25 08:16 agis_schedconf.cvmfs.json
[2025-11-25 08:21:02] -rw------- 1 boinc boinc   1516227 Nov 25 08:16 agis_ddmendpoints.agis.ALL.json
[2025-11-25 08:21:02] drwx------ 5 boinc boinc      4096 Nov 25 08:16 pilot3
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc       522 Nov 25 08:17 boinc_task_state.xml
[2025-11-25 08:21:02] -rw------- 1 boinc boinc       956 Nov 25 08:18 memory_monitor_summary.json
[2025-11-25 08:21:02] -rw------- 1 boinc boinc     55869 Nov 25 08:18 log.47556149._002732.job.log.tgz.1
[2025-11-25 08:21:02] -rw------- 1 boinc boinc        95 Nov 25 08:19 pilot_heartbeat.json
[2025-11-25 08:21:02] -rw------- 1 boinc boinc      8402 Nov 25 08:20 heartbeat.json
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc      8192 Nov 25 08:20 boinc_mmap_file
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc        22 Nov 25 08:20 wrapper_checkpoint.txt
[2025-11-25 08:21:02] -rw------- 1 boinc boinc      4752 Nov 25 08:21 pilotlog.txt
[2025-11-25 08:21:02] -rw------- 1 boinc boinc     93280 Nov 25 08:21 log.47556149._002732.job.log.1
[2025-11-25 08:21:02] -rw------- 1 boinc boinc       186 Nov 25 08:21 output.list
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc       620 Nov 25 08:21 runtime_log
[2025-11-25 08:21:02] -rw------- 1 boinc boinc    174080 Nov 25 08:21 result.tar.gz
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc      8744 Nov 25 08:21 runtime_log.err
[2025-11-25 08:21:02] -rw------- 1 boinc boinc       649 Nov 25 08:21 Qx8NDm0dhh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkzIKDmzqwPMn.diag
[2025-11-25 08:21:02] -rw-r--r-- 1 boinc boinc      8414 Nov 25 08:21 stderr.txt
[2025-11-25 08:21:02] No HITS result produced
[2025-11-25 08:21:02]  *** Contents of shared directory: ***
[2025-11-25 08:21:02] total 402480
[2025-11-25 08:21:02] -rw-r--r-- 2 boinc boinc 411346600 Nov 25 08:16 ATLAS.root_0
[2025-11-25 08:21:02] -rw-r--r-- 2 boinc boinc    590103 Nov 25 08:16 input.tar.gz
[2025-11-25 08:21:02] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:16 start_atlas.sh
[2025-11-25 08:21:02] -rw------- 1 boinc boinc    174080 Nov 25 08:21 result.tar.gz
08:21:03 (3726408): run_atlas exited; CPU time 31.664811
08:21:03 (3726408): called boinc_finish(0)

</stderr_txt>
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