Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:39:00 (2234880): wrapper (7.7.26015): starting
08:39:00 (2234880): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 08:39:00] Arguments: --nthreads 4
[2025-11-26 08:39:00] Threads: 4
[2025-11-26 08:39:00] Checking for CVMFS
[2025-11-26 08:39:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:39:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:39:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:39:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:39:01] 2.13.3.0 3983 2311 44472 153323 2 90 3348703 4096001 5950 130560 0 7134188 99.995 88392 2747 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 08:39:01] CVMFS is ok
[2025-11-26 08:39:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 08:39:01] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 08:39:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 08:39:01] Further information can be found at the LHC@home message board.
[2025-11-26 08:39:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:39:01] Checking for apptainer binary...
[2025-11-26 08:39:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:39:01] Running /usr/bin/apptainer --version
[2025-11-26 08:39:01] apptainer version 1.4.1
[2025-11-26 08:39:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:39:01] linux-7950X
[2025-11-26 08:39:01] apptainer works
[2025-11-26 08:39:01] Set ATHENA_PROC_NUMBER=4
[2025-11-26 08:39:01] Set ATHENA_CORE_NUMBER=4
[2025-11-26 08:39:01] Starting ATLAS job with PandaID=6895371742
[2025-11-26 08:39:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 16:28:59]  *** The last 200 lines of the pilot log: ***
[2025-11-26 16:28:59] 2025-11-26 21:28:03,507 | INFO     | time since job start (28136s) is within the limit (172800.0s)
[2025-11-26 16:28:59] 2025-11-26 21:28:03,967 | INFO     | monitor loop #2098: job 0:6895371742 is in state 'finished'
[2025-11-26 16:28:59] 2025-11-26 21:28:03,967 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,110 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 16:28:59] 2025-11-26 21:28:04,113 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4682.8634375
[2025-11-26 16:28:59] 2025-11-26 21:28:04,116 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6895371742/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,116 | INFO     | extracted standard info from prmon json
[2025-11-26 16:28:59] 2025-11-26 21:28:04,116 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 16:28:59] 2025-11-26 21:28:04,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 16:28:59] 2025-11-26 21:28:04,120 | INFO     | fitting pss+swap vs Time
[2025-11-26 16:28:59] 2025-11-26 21:28:04,120 | INFO     | sum of square deviations: 30379397510.0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,123 | INFO     | sum of deviations: 156314921334.00003
[2025-11-26 16:28:59] 2025-11-26 21:28:04,123 | INFO     | mean x: 1764178397.0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,123 | INFO     | mean y: 2254732.867678959
[2025-11-26 16:28:59] 2025-11-26 21:28:04,123 | INFO     | intersect: -9075193470.488651
[2025-11-26 16:28:59] 2025-11-26 21:28:04,123 | INFO     | chi2: 2.426311856636894
[2025-11-26 16:28:59] 2025-11-26 21:28:04,123 | INFO     | sum of square deviations: 29401593130.0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,126 | INFO     | sum of deviations: 216312303923.00003
[2025-11-26 16:28:59] 2025-11-26 21:28:04,126 | INFO     | mean x: 1764178244.5
[2025-11-26 16:28:59] 2025-11-26 21:28:04,126 | INFO     | mean y: 2264053.6096491227
[2025-11-26 16:28:59] 2025-11-26 21:28:04,126 | INFO     | intersect: -12977082300.559446
[2025-11-26 16:28:59] 2025-11-26 21:28:04,126 | INFO     | chi2: 1.2454484993988542
[2025-11-26 16:28:59] 2025-11-26 21:28:04,126 | INFO     | current chi2=1.2454484993988542 (change=48.66906758123138 %)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,126 | INFO     | sum of square deviations: 28444998450.0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,128 | INFO     | sum of deviations: 211972111223.0001
[2025-11-26 16:28:59] 2025-11-26 21:28:04,128 | INFO     | mean x: 1764178092.0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,128 | INFO     | mean y: 2263361.66075388
[2025-11-26 16:28:59] 2025-11-26 21:28:04,129 | INFO     | intersect: -13144390711.530243
[2025-11-26 16:28:59] 2025-11-26 21:28:04,129 | INFO     | chi2: 1.2447973518707787
[2025-11-26 16:28:59] 2025-11-26 21:28:04,129 | INFO     | current chi2=1.2447973518707787 (change=0.05228217211629248 %)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,129 | INFO     | right removable region: 450
[2025-11-26 16:28:59] 2025-11-26 21:28:04,129 | INFO     | sum of square deviations: 29401593130.0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,131 | INFO     | sum of deviations: 101612988516.99998
[2025-11-26 16:28:59] 2025-11-26 21:28:04,131 | INFO     | mean x: 1764178549.5
[2025-11-26 16:28:59] 2025-11-26 21:28:04,131 | INFO     | mean y: 2263215.899122807
[2025-11-26 16:28:59] 2025-11-26 21:28:04,132 | INFO     | intersect: -6094802813.810988
[2025-11-26 16:28:59] 2025-11-26 21:28:04,132 | INFO     | chi2: 1.2113664634906056
[2025-11-26 16:28:59] 2025-11-26 21:28:04,132 | INFO     | current chi2=1.2113664634906056 (change=50.07375246602973 %)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,132 | INFO     | sum of square deviations: 28444998450.0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,134 | INFO     | sum of deviations: 94550712907.00002
[2025-11-26 16:28:59] 2025-11-26 21:28:04,134 | INFO     | mean x: 1764178702.0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,134 | INFO     | mean y: 2264341.019955654
[2025-11-26 16:28:59] 2025-11-26 21:28:04,134 | INFO     | intersect: -5861837014.536488
[2025-11-26 16:28:59] 2025-11-26 21:28:04,135 | INFO     | chi2: 1.2094341011108498
[2025-11-26 16:28:59] 2025-11-26 21:28:04,135 | INFO     | current chi2=1.2094341011108498 (change=0.15951922378531236 %)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,135 | INFO     | left removable region: 20
[2025-11-26 16:28:59] 2025-11-26 21:28:04,135 | INFO     | sum of square deviations: 24653662247.5
[2025-11-26 16:28:59] 2025-11-26 21:28:04,137 | INFO     | sum of deviations: 136526212125.0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,137 | INFO     | mean x: 1764178671.5
[2025-11-26 16:28:59] 2025-11-26 21:28:04,137 | INFO     | mean y: 2275534.172093023
[2025-11-26 16:28:59] 2025-11-26 21:28:04,137 | INFO     | intersect: -9767333098.9645
[2025-11-26 16:28:59] 2025-11-26 21:28:04,137 | INFO     | chi2: 0.018976541805760576
[2025-11-26 16:28:59] 2025-11-26 21:28:04,137 | INFO     | current memory leak: 5.54 B/s (using 430 data points, chi2=0.02)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | could have reported an average CPU frequency of 4595 MHz (19 samples)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | ..............................
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | . Timing measurements:
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | . get job = 0 s
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | . initial setup = 1 s
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | . payload setup = 3 s
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | . stage-in = 0 s
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | . payload execution = 28107 s
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | . stage-out = 2 s
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | . log creation = 0 s
[2025-11-26 16:28:59] 2025-11-26 21:28:04,138 | INFO     | ..............................
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | 
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | job summary report
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | --------------------------------------------------
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | PanDA job id: 6895371742
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | task id: 47556137
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | errors: (none)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | pilot state: finished 
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | transexitcode: 0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | exeerrorcode: 0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | exeerrordiag: 
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | exitcode: 0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | exitmsg: OK
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | cpuconsumptiontime: 110391 s
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | nevents: 1000
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | neventsw: 0
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | pid: 2245405
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | pgrp: 2245405
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | corecount: 4
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | event service: False
[2025-11-26 16:28:59] 2025-11-26 21:28:04,183 | INFO     | sizes: {0: 2284322, 2: 2284584, 11: 2284612, 28113: 2322720, 28114: 2322719, 28116: 2331967, 28123: 2332157}
[2025-11-26 16:28:59] 2025-11-26 21:28:04,184 | INFO     | --------------------------------------------------
[2025-11-26 16:28:59] 2025-11-26 21:28:04,184 | INFO     | 
[2025-11-26 16:28:59] 2025-11-26 21:28:04,184 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,197 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 16:28:59] 2025-11-26 21:28:04,198 | INFO     | job 6895371742 has completed (purged errors)
[2025-11-26 16:28:59] 2025-11-26 21:28:04,198 | INFO     | overall cleanup function is called
[2025-11-26 16:28:59] 2025-11-26 21:28:05,208 | INFO     | --- collectZombieJob: --- 10, [2245405]
[2025-11-26 16:28:59] 2025-11-26 21:28:05,208 | INFO     | zombie collector waiting for pid 2245405
[2025-11-26 16:28:59] 2025-11-26 21:28:05,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 16:28:59] 2025-11-26 21:28:05,209 | INFO     | collected zombie processes
[2025-11-26 16:28:59] 2025-11-26 21:28:05,209 | INFO     | will attempt to kill all subprocesses of pid=2245405
[2025-11-26 16:28:59] 2025-11-26 21:28:05,297 | INFO     | process IDs to be killed: [2245405] (in reverse order)
[2025-11-26 16:28:59] 2025-11-26 21:28:05,341 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 16:28:59] 2025-11-26 21:28:05,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 16:28:59] 2025-11-26 21:28:05,344 | INFO     | did not find any defunct processes belonging to 2245405
[2025-11-26 16:28:59] 2025-11-26 21:28:05,347 | INFO     | did not find any defunct processes belonging to 2245405
[2025-11-26 16:28:59] 2025-11-26 21:28:05,348 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 16:28:59] 2025-11-26 21:28:05,348 | INFO     | ready for new job
[2025-11-26 16:28:59] 2025-11-26 21:28:05,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 16:28:59] 2025-11-26 21:28:05,350 | INFO     | ***************************************
[2025-11-26 16:28:59] 2025-11-26 21:28:05,350 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 16:28:59] 2025-11-26 21:28:05,350 | INFO     | ***************************************
[2025-11-26 16:28:59] 2025-11-26 21:28:05,350 | INFO     | 
[2025-11-26 16:28:59] 2025-11-26 21:28:05,351 | INFO     | architecture information:
[2025-11-26 16:28:59] 2025-11-26 21:28:05,351 | INFO     | executing command: cat /etc/os-release
[2025-11-26 16:28:59] 2025-11-26 21:28:05,361 | INFO     | cat /etc/os-release:
[2025-11-26 16:28:59] NAME="CentOS Linux"
[2025-11-26 16:28:59] VERSION="7 (Core)"
[2025-11-26 16:28:59] ID="centos"
[2025-11-26 16:28:59] ID_LIKE="rhel fedora"
[2025-11-26 16:28:59] VERSION_ID="7"
[2025-11-26 16:28:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 16:28:59] ANSI_COLOR="0;31"
[2025-11-26 16:28:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 16:28:59] HOME_URL="https://www.centos.org/"
[2025-11-26 16:28:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 16:28:59] 
[2025-11-26 16:28:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 16:28:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 16:28:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 16:28:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 16:28:59] 
[2025-11-26 16:28:59] 2025-11-26 21:28:05,361 | INFO     | ***************************************
[2025-11-26 16:28:59] 2025-11-26 21:28:05,863 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-11-26 16:28:59] 2025-11-26 21:28:05,874 | INFO     | sufficient remaining disk space (872467660800 B)
[2025-11-26 16:28:59] 2025-11-26 21:28:05,874 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 16:28:59] 2025-11-26 21:28:05,875 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 16:28:59] 2025-11-26 21:28:05,875 | INFO     | update_server=False
[2025-11-26 16:28:59] 2025-11-26 21:28:05,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 16:28:59] 2025-11-26 21:28:05,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 16:28:59] 2025-11-26 21:28:05,875 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:28:59] 2025-11-26 21:28:05,875 | INFO     | aborting loop
[2025-11-26 16:28:59] 2025-11-26 21:28:05,875 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 16:28:59] 2025-11-26 21:28:06,487 | INFO     | all data control threads have been joined
[2025-11-26 16:28:59] 2025-11-26 21:28:06,880 | INFO     | [job] retrieve thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:06,880 | INFO     | [job] job monitor thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:06,881 | INFO     | [job] queue monitor thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:06,952 | INFO     | [payload] validate_post thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:07,051 | INFO     | [data] copytool_in thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:07,140 | INFO     | all payload control threads have been joined
[2025-11-26 16:28:59] 2025-11-26 21:28:07,317 | INFO     | [payload] failed_post thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:07,369 | INFO     | all job control threads have been joined
[2025-11-26 16:28:59] 2025-11-26 21:28:07,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 16:28:59] 2025-11-26 21:28:07,492 | INFO     | [data] control thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:07,590 | INFO     | [job] validate thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:07,687 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:07,694 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:07,703 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:07,880 | INFO     | [data] copytool_out thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:07,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:08,141 | INFO     | [payload] control thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:08,374 | INFO     | [job] control thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:11,481 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 16:28:59] 2025-11-26 21:28:36,692 | INFO     | PID=2238727 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 16:28:59] 2025-11-26 21:28:36,692 | INFO     | .. there are 8 such processes running
[2025-11-26 16:28:59] 2025-11-26 21:28:36,693 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 16:28:59] 2025-11-26 21:28:36,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 16:28:59] 2025-11-26 21:28:36,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 16:28:59] 2025-11-26 21:28:54,165 | INFO     | [monitor] cgroup control has ended
[2025-11-26 16:28:59] 2025-11-26 21:28:54,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123128726611776)>', '<ExcThread(monitor, started 123128105654016)>']
[2025-11-26 16:28:59] 2025-11-26 21:28:54,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 16:28:59] 2025-11-26 21:28:54,781 | INFO     | [monitor] control thread has ended
[2025-11-26 16:28:59] 2025-11-26 21:28:59,379 | INFO     | all workflow threads have been joined
[2025-11-26 16:28:59] 2025-11-26 21:28:59,379 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 16:28:59] 2025-11-26 21:28:59,380 | INFO     | traces error code: 0
[2025-11-26 16:28:59] 2025-11-26 21:28:59,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 16:28:59] 2025-11-26 21:28:59,444 [wrapper] ==== pilot stdout END ====
[2025-11-26 16:28:59] 2025-11-26 21:28:59,446 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 16:28:59] 2025-11-26 21:28:59,447 [wrapper] pilotpid: 2238727
[2025-11-26 16:28:59] 2025-11-26 21:28:59,449 [wrapper] Pilot exit status: 0
[2025-11-26 16:28:59] 2025-11-26 21:28:59,454 [wrapper] pandaids: 6895371742
[2025-11-26 16:28:59] 2025-11-26 21:28:59,480 [wrapper] cleanup supervisor_pilot 2660490 2238728
[2025-11-26 16:28:59] 2025-11-26 21:28:59,481 [wrapper] Test setup, not cleaning
[2025-11-26 16:28:59] 2025-11-26 21:28:59,483 [wrapper] apfmon messages muted
[2025-11-26 16:28:59] 2025-11-26 21:28:59,484 [wrapper] ==== wrapper stdout END ====
[2025-11-26 16:28:59] 2025-11-26 21:28:59,486 [wrapper] ==== wrapper stderr END ====
[2025-11-26 16:28:59]  *** Error codes and diagnostics ***
[2025-11-26 16:28:59]     "exeErrorCode": 0,
[2025-11-26 16:28:59]     "exeErrorDiag": "",
[2025-11-26 16:28:59]     "pilotErrorCode": 0,
[2025-11-26 16:28:59]     "pilotErrorDiag": "",
[2025-11-26 16:28:59]  *** Listing of results directory ***
[2025-11-26 16:28:59] total 1306688
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc    576529 Nov 23 16:23 pilot3.tar.gz
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc      5112 Nov 23 16:32 queuedata.json
[2025-11-26 16:28:59] -rwx------ 1 boinc boinc     36292 Nov 23 16:32 runpilot2-wrapper.sh
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc       100 Nov 26 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 16:28:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 08:39 run_atlas
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc       105 Nov 26 08:39 job.xml
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc      9844 Nov 26 08:39 init_data.xml
[2025-11-26 16:28:59] -rw-r--r-- 2 boinc boinc 408167136 Nov 26 08:39 EVNT.47483658._000900.pool.root.1
[2025-11-26 16:28:59] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:39 start_atlas.sh
[2025-11-26 16:28:59] drwxrwx--x 2 boinc boinc      4096 Nov 26 08:39 shared
[2025-11-26 16:28:59] -rw-r--r-- 2 boinc boinc    590104 Nov 26 08:39 input.tar.gz
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc         0 Nov 26 08:39 boinc_lockfile
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc      2786 Nov 26 08:39 pandaJob.out
[2025-11-26 16:28:59] -rw------- 1 boinc boinc    991830 Nov 26 08:39 agis_schedconf.cvmfs.json
[2025-11-26 16:28:59] drwx------ 5 boinc boinc      4096 Nov 26 08:39 pilot3
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc       532 Nov 26 16:22 boinc_task_state.xml
[2025-11-26 16:28:59] -rw------- 1 boinc boinc 915301145 Nov 26 16:27 HITS.47556137._008866.pool.root.1
[2025-11-26 16:28:59] -rw------- 1 boinc boinc      1031 Nov 26 16:27 memory_monitor_summary.json
[2025-11-26 16:28:59] -rw------- 1 boinc boinc   1516240 Nov 26 16:27 agis_ddmendpoints.agis.ALL.json
[2025-11-26 16:28:59] -rw------- 1 boinc boinc   1287676 Nov 26 16:27 log.47556137._008866.job.log.tgz.1
[2025-11-26 16:28:59] -rw------- 1 boinc boinc      8547 Nov 26 16:28 heartbeat.json
[2025-11-26 16:28:59] -rw------- 1 boinc boinc        95 Nov 26 16:28 pilot_heartbeat.json
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc        29 Nov 26 16:28 wrapper_checkpoint.txt
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc      8192 Nov 26 16:28 boinc_mmap_file
[2025-11-26 16:28:59] -rw------- 1 boinc boinc      4831 Nov 26 16:28 pilotlog.txt
[2025-11-26 16:28:59] -rw------- 1 boinc boinc   4038998 Nov 26 16:28 log.47556137._008866.job.log.1
[2025-11-26 16:28:59] -rw------- 1 boinc boinc       353 Nov 26 16:28 output.list
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc       620 Nov 26 16:28 runtime_log
[2025-11-26 16:28:59] -rw------- 1 boinc boinc   5345280 Nov 26 16:28 result.tar.gz
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc      8898 Nov 26 16:28 runtime_log.err
[2025-11-26 16:28:59] -rw------- 1 boinc boinc       651 Nov 26 16:28 OleLDmqrWh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmICLKDmpEqrfm.diag
[2025-11-26 16:28:59] -rw-r--r-- 1 boinc boinc     21330 Nov 26 16:28 stderr.txt
[2025-11-26 16:28:59] HITS file was successfully produced:
[2025-11-26 16:28:59] -rw------- 1 boinc boinc 915301145 Nov 26 16:27 shared/HITS.pool.root.1
[2025-11-26 16:28:59]  *** Contents of shared directory: ***
[2025-11-26 16:28:59] total 1298280
[2025-11-26 16:28:59] -rw-r--r-- 2 boinc boinc 408167136 Nov 26 08:39 ATLAS.root_0
[2025-11-26 16:28:59] -rw-r--r-- 2 boinc boinc     15847 Nov 26 08:39 start_atlas.sh
[2025-11-26 16:28:59] -rw-r--r-- 2 boinc boinc    590104 Nov 26 08:39 input.tar.gz
[2025-11-26 16:28:59] -rw------- 1 boinc boinc 915301145 Nov 26 16:27 HITS.pool.root.1
[2025-11-26 16:28:59] -rw------- 1 boinc boinc   5345280 Nov 26 16:28 result.tar.gz
16:29:00 (2234880): run_atlas exited; CPU time 110377.752270
16:29:00 (2234880): called boinc_finish(0)

</stderr_txt>
]]>

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