Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:43:46 (14355): wrapper (7.7.26015): starting
01:43:46 (14355): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:43:46] Arguments: --nthreads 8
[2025-11-25 01:43:46] Threads: 8
[2025-11-25 01:43:46] Checking for CVMFS
[2025-11-25 01:43:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:43:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:43:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:43:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:43:47] 2.11.4.0 5420 115880 70832 153273 1 81 13018354 18432001 1885 130560 0 81595476 99.973 4924331 31823 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 01:43:47] CVMFS is ok
[2025-11-25 01:43:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 01:43:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 01:43:47] Further information can be found at the LHC@home message board.
[2025-11-25 01:43:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:43:47] Checking for apptainer binary...
[2025-11-25 01:43:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:43:47] Running /usr/bin/apptainer --version
[2025-11-25 01:43:47] apptainer version 1.3.2-1.el7
[2025-11-25 01:43:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:43:48] c-206-22.aglt2.org
[2025-11-25 01:43:48] apptainer works
[2025-11-25 01:43:48] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:43:48] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:43:48] Starting ATLAS job with PandaID=6895417923
[2025-11-25 01:43:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:20:02]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:20:02] 2025-11-26 02:19:09,304 | INFO     | time since job start (70510s) is within the limit (172800.0s)
[2025-11-25 21:20:02] 2025-11-26 02:19:09,464 | INFO     | monitor loop #5046: job 0:6895417923 is in state 'finished'
[2025-11-25 21:20:02] 2025-11-26 02:19:09,464 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:20:02] 2025-11-26 02:19:09,953 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 21:20:02] 2025-11-26 02:19:09,959 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2455.7083333333335
[2025-11-25 21:20:02] 2025-11-26 02:19:09,964 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895417923/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 21:20:02] 2025-11-26 02:19:09,964 | INFO     | extracted standard info from prmon json
[2025-11-25 21:20:02] 2025-11-26 02:19:09,965 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 21:20:02] 2025-11-26 02:19:09,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 21:20:02] 2025-11-26 02:19:09,995 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:20:02] 2025-11-26 02:19:09,997 | INFO     | sum of square deviations: 479019520806.35974
[2025-11-25 21:20:02] 2025-11-26 02:19:10,050 | INFO     | sum of deviations: 2044485623999.6614
[2025-11-25 21:20:02] 2025-11-26 02:19:10,050 | INFO     | mean x: 1764088293.100346
[2025-11-25 21:20:02] 2025-11-26 02:19:10,050 | INFO     | mean y: 2864389.356401384
[2025-11-25 21:20:02] 2025-11-26 02:19:10,050 | INFO     | intersect: -7526376065.476175
[2025-11-25 21:20:02] 2025-11-26 02:19:10,052 | INFO     | chi2: 6.465821067108969
[2025-11-25 21:20:02] 2025-11-26 02:19:10,054 | INFO     | sum of square deviations: 472830946669.55
[2025-11-25 21:20:02] 2025-11-26 02:19:10,081 | INFO     | sum of deviations: 2410426146581.8115
[2025-11-25 21:20:02] 2025-11-26 02:19:10,082 | INFO     | mean x: 1764088140.602954
[2025-11-25 21:20:02] 2025-11-26 02:19:10,082 | INFO     | mean y: 2873402.997393571
[2025-11-25 21:20:02] 2025-11-26 02:19:10,082 | INFO     | intersect: -8990201625.054892
[2025-11-25 21:20:02] 2025-11-26 02:19:10,083 | INFO     | chi2: 3.5054690040388587
[2025-11-25 21:20:02] 2025-11-26 02:19:10,083 | INFO     | current chi2=3.5054690040388587 (change=45.78462707743563 %)
[2025-11-25 21:20:02] 2025-11-26 02:19:10,084 | INFO     | sum of square deviations: 466695908420.22473
[2025-11-25 21:20:02] 2025-11-26 02:19:10,108 | INFO     | sum of deviations: 2596629337576.719
[2025-11-25 21:20:02] 2025-11-26 02:19:10,108 | INFO     | mean x: 1764087988.1055846
[2025-11-25 21:20:02] 2025-11-26 02:19:10,108 | INFO     | mean y: 2878030.6221640487
[2025-11-25 21:20:02] 2025-11-26 02:19:10,108 | INFO     | intersect: -9812255424.23789
[2025-11-25 21:20:02] 2025-11-26 02:19:10,109 | INFO     | chi2: 2.6623440756231087
[2025-11-25 21:20:02] 2025-11-26 02:19:10,109 | INFO     | current chi2=2.6623440756231087 (change=24.051701140256434 %)
[2025-11-25 21:20:02] 2025-11-26 02:19:10,109 | INFO     | right removable region: 1145
[2025-11-25 21:20:02] 2025-11-26 02:19:10,110 | INFO     | sum of square deviations: 472830523329.55
[2025-11-25 21:20:02] 2025-11-26 02:19:10,134 | INFO     | sum of deviations: 1752835405101.1848
[2025-11-25 21:20:02] 2025-11-26 02:19:10,134 | INFO     | mean x: 1764088445.602954
[2025-11-25 21:20:02] 2025-11-26 02:19:10,134 | INFO     | mean y: 2871567.5343179842
[2025-11-25 21:20:02] 2025-11-26 02:19:10,134 | INFO     | intersect: -6536800751.859547
[2025-11-25 21:20:02] 2025-11-26 02:19:10,135 | INFO     | chi2: 4.518614276841586
[2025-11-25 21:20:02] 2025-11-26 02:19:10,136 | INFO     | current chi2=4.518614276841586 (change=30.115383182696526 %)
[2025-11-25 21:20:02] 2025-11-26 02:19:10,137 | INFO     | sum of square deviations: 466695201796.6437
[2025-11-25 21:20:02] 2025-11-26 02:19:10,160 | INFO     | sum of deviations: 1676869707400.5945
[2025-11-25 21:20:02] 2025-11-26 02:19:10,160 | INFO     | mean x: 1764088598.1038394
[2025-11-25 21:20:02] 2025-11-26 02:19:10,161 | INFO     | mean y: 2873455.364746946
[2025-11-25 21:20:02] 2025-11-26 02:19:10,161 | INFO     | intersect: -6335624819.190225
[2025-11-25 21:20:02] 2025-11-26 02:19:10,162 | INFO     | chi2: 4.463842207724935
[2025-11-25 21:20:02] 2025-11-26 02:19:10,162 | INFO     | current chi2=4.463842207724935 (change=1.21214305450598 %)
[2025-11-25 21:20:02] 2025-11-26 02:19:10,162 | INFO     | left removable region: 20
[2025-11-25 21:20:02] 2025-11-26 02:19:10,163 | INFO     | sum of square deviations: 441507042109.9112
[2025-11-25 21:20:02] 2025-11-26 02:19:10,189 | INFO     | sum of deviations: 2159859804888.7158
[2025-11-25 21:20:02] 2025-11-26 02:19:10,189 | INFO     | mean x: 1764088567.6088889
[2025-11-25 21:20:02] 2025-11-26 02:19:10,189 | INFO     | mean y: 2890741.888
[2025-11-25 21:20:02] 2025-11-26 02:19:10,189 | INFO     | intersect: -8627059918.09178
[2025-11-25 21:20:02] 2025-11-26 02:19:10,191 | INFO     | chi2: 0.48694895896809404
[2025-11-25 21:20:02] 2025-11-26 02:19:10,191 | INFO     | current memory leak: 4.89 B/s (using 1125 data points, chi2=0.49)
[2025-11-25 21:20:02] 2025-11-26 02:19:10,193 | INFO     | could have reported an average CPU frequency of 2629 MHz (42 samples)
[2025-11-25 21:20:02] 2025-11-26 02:19:10,193 | INFO     | ..............................
[2025-11-25 21:20:02] 2025-11-26 02:19:10,193 | INFO     | . Timing measurements:
[2025-11-25 21:20:02] 2025-11-26 02:19:10,193 | INFO     | . get job = 0 s
[2025-11-25 21:20:02] 2025-11-26 02:19:10,193 | INFO     | . initial setup = 2 s
[2025-11-25 21:20:02] 2025-11-26 02:19:10,194 | INFO     | . payload setup = 5 s
[2025-11-25 21:20:02] 2025-11-26 02:19:10,194 | INFO     | . stage-in = 0 s
[2025-11-25 21:20:02] 2025-11-26 02:19:10,194 | INFO     | . payload execution = 70475 s
[2025-11-25 21:20:02] 2025-11-26 02:19:10,194 | INFO     | . stage-out = 4 s
[2025-11-25 21:20:02] 2025-11-26 02:19:10,194 | INFO     | . log creation = 0 s
[2025-11-25 21:20:02] 2025-11-26 02:19:10,194 | INFO     | ..............................
[2025-11-25 21:20:02] 2025-11-26 02:19:10,319 | INFO     | 
[2025-11-25 21:20:02] 2025-11-26 02:19:10,319 | INFO     | job summary report
[2025-11-25 21:20:02] 2025-11-26 02:19:10,319 | INFO     | --------------------------------------------------
[2025-11-25 21:20:02] 2025-11-26 02:19:10,319 | INFO     | PanDA job id: 6895417923
[2025-11-25 21:20:02] 2025-11-26 02:19:10,319 | INFO     | task id: 47556149
[2025-11-25 21:20:02] 2025-11-26 02:19:10,320 | INFO     | errors: (none)
[2025-11-25 21:20:02] 2025-11-26 02:19:10,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:20:02] 2025-11-26 02:19:10,320 | INFO     | pilot state: finished 
[2025-11-25 21:20:02] 2025-11-26 02:19:10,320 | INFO     | transexitcode: 0
[2025-11-25 21:20:02] 2025-11-26 02:19:10,320 | INFO     | exeerrorcode: 0
[2025-11-25 21:20:02] 2025-11-26 02:19:10,320 | INFO     | exeerrordiag: 
[2025-11-25 21:20:02] 2025-11-26 02:19:10,321 | INFO     | exitcode: 0
[2025-11-25 21:20:02] 2025-11-26 02:19:10,321 | INFO     | exitmsg: OK
[2025-11-25 21:20:02] 2025-11-26 02:19:10,321 | INFO     | cpuconsumptiontime: 540123 s
[2025-11-25 21:20:02] 2025-11-26 02:19:10,321 | INFO     | nevents: 1000
[2025-11-25 21:20:02] 2025-11-26 02:19:10,321 | INFO     | neventsw: 0
[2025-11-25 21:20:02] 2025-11-26 02:19:10,322 | INFO     | pid: 27615
[2025-11-25 21:20:02] 2025-11-26 02:19:10,322 | INFO     | pgrp: 27615
[2025-11-25 21:20:02] 2025-11-26 02:19:10,322 | INFO     | corecount: 8
[2025-11-25 21:20:02] 2025-11-26 02:19:10,322 | INFO     | event service: False
[2025-11-25 21:20:02] 2025-11-26 02:19:10,322 | INFO     | sizes: {0: 2284088, 1: 2284287, 4: 2284549, 12: 2284577, 70484: 2341319, 70489: 2350318, 70491: 2350502, 70495: 2350748}
[2025-11-25 21:20:02] 2025-11-26 02:19:10,322 | INFO     | --------------------------------------------------
[2025-11-25 21:20:02] 2025-11-26 02:19:10,329 | INFO     | 
[2025-11-25 21:20:02] 2025-11-26 02:19:10,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 21:20:02] 2025-11-26 02:19:10,346 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,348 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:20:02] 2025-11-26 02:19:10,348 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,348 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:20:02] 2025-11-26 02:19:10,348 | INFO     | job 6895417923 has completed (purged errors)
[2025-11-25 21:20:02] 2025-11-26 02:19:10,348 | INFO     | overall cleanup function is called
[2025-11-25 21:20:02] 2025-11-26 02:19:11,360 | INFO     | --- collectZombieJob: --- 10, [27615]
[2025-11-25 21:20:02] 2025-11-26 02:19:11,371 | INFO     | zombie collector waiting for pid 27615
[2025-11-25 21:20:02] 2025-11-26 02:19:11,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:20:02] 2025-11-26 02:19:11,372 | INFO     | collected zombie processes
[2025-11-25 21:20:02] 2025-11-26 02:19:11,372 | INFO     | will attempt to kill all subprocesses of pid=27615
[2025-11-25 21:20:02] 2025-11-26 02:19:11,536 | INFO     | process IDs to be killed: [27615] (in reverse order)
[2025-11-25 21:20:02] 2025-11-26 02:19:11,598 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:20:02] 2025-11-26 02:19:11,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:20:02] 2025-11-26 02:19:11,605 | INFO     | did not find any defunct processes belonging to 27615
[2025-11-25 21:20:02] 2025-11-26 02:19:11,610 | INFO     | did not find any defunct processes belonging to 27615
[2025-11-25 21:20:02] 2025-11-26 02:19:11,612 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:20:02] 2025-11-26 02:19:11,612 | INFO     | ready for new job
[2025-11-25 21:20:02] 2025-11-26 02:19:11,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:20:02] 2025-11-26 02:19:11,617 | INFO     | ***************************************
[2025-11-25 21:20:02] 2025-11-26 02:19:11,617 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:20:02] 2025-11-26 02:19:11,617 | INFO     | ***************************************
[2025-11-25 21:20:02] 2025-11-26 02:19:11,617 | INFO     | 
[2025-11-25 21:20:02] 2025-11-26 02:19:11,618 | INFO     | architecture information:
[2025-11-25 21:20:02] 2025-11-26 02:19:11,618 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:20:02] 2025-11-26 02:19:11,628 | INFO     | cat /etc/os-release:
[2025-11-25 21:20:02] NAME="CentOS Linux"
[2025-11-25 21:20:02] VERSION="7 (Core)"
[2025-11-25 21:20:02] ID="centos"
[2025-11-25 21:20:02] ID_LIKE="rhel fedora"
[2025-11-25 21:20:02] VERSION_ID="7"
[2025-11-25 21:20:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:20:02] ANSI_COLOR="0;31"
[2025-11-25 21:20:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:20:02] HOME_URL="https://www.centos.org/"
[2025-11-25 21:20:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:20:02] 
[2025-11-25 21:20:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:20:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:20:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:20:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:20:02] 
[2025-11-25 21:20:02] 2025-11-26 02:19:11,628 | INFO     | ***************************************
[2025-11-25 21:20:02] 2025-11-26 02:19:12,132 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 21:20:02] 2025-11-26 02:19:12,165 | INFO     | sufficient remaining disk space (24977080320 B)
[2025-11-25 21:20:02] 2025-11-26 02:19:12,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:20:02] 2025-11-26 02:19:12,166 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:20:02] 2025-11-26 02:19:12,166 | INFO     | update_server=False
[2025-11-25 21:20:02] 2025-11-26 02:19:12,166 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:20:02] 2025-11-26 02:19:12,166 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:20:02] 2025-11-26 02:19:12,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:20:02] 2025-11-26 02:19:12,288 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:20:02] 2025-11-26 02:19:12,301 | INFO     | all data control threads have been joined
[2025-11-25 21:20:02] 2025-11-26 02:19:12,519 | INFO     | all payload control threads have been joined
[2025-11-25 21:20:02] 2025-11-26 02:19:12,972 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:20:02] 2025-11-26 02:19:12,972 | INFO     | aborting loop
[2025-11-25 21:20:02] 2025-11-26 02:19:13,167 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:13,168 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:13,307 | INFO     | [data] control thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:13,349 | INFO     | all job control threads have been joined
[2025-11-25 21:20:02] 2025-11-26 02:19:13,519 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:13,525 | INFO     | [payload] control thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:13,564 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:13,727 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:13,977 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:14,053 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:14,054 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:14,174 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:14,284 | INFO     | [job] validate thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:14,354 | INFO     | [job] control thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:14,501 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:14,757 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:16,294 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:20:02] 2025-11-26 02:19:42,547 | INFO     | PID=18047 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 21:20:02] 2025-11-26 02:19:42,547 | INFO     | .. there are 3 such processes running
[2025-11-25 21:20:02] 2025-11-26 02:19:42,547 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:20:02] 2025-11-26 02:19:42,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:20:02] 2025-11-26 02:19:42,548 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:20:02] 2025-11-26 02:19:55,985 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:20:02] 2025-11-26 02:19:56,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765218588480)>', '<ExcThread(monitor, started 139764770514688)>']
[2025-11-25 21:20:02] 2025-11-26 02:19:57,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:20:02] 2025-11-26 02:19:57,620 | INFO     | [monitor] control thread has ended
[2025-11-25 21:20:02] 2025-11-26 02:20:02,016 | INFO     | all workflow threads have been joined
[2025-11-25 21:20:02] 2025-11-26 02:20:02,016 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:20:02] 2025-11-26 02:20:02,016 | INFO     | traces error code: 0
[2025-11-25 21:20:02] 2025-11-26 02:20:02,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:20:02] 2025-11-26 02:20:02,135 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:20:02] 2025-11-26 02:20:02,137 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:20:02] 2025-11-26 02:20:02,139 [wrapper] pilotpid: 18047
[2025-11-25 21:20:02] 2025-11-26 02:20:02,141 [wrapper] Pilot exit status: 0
[2025-11-25 21:20:02] 2025-11-26 02:20:02,150 [wrapper] pandaids: 6895417923
[2025-11-25 21:20:02] 2025-11-26 02:20:02,183 [wrapper] cleanup supervisor_pilot 25209 18048
[2025-11-25 21:20:02] 2025-11-26 02:20:02,185 [wrapper] Test setup, not cleaning
[2025-11-25 21:20:02] 2025-11-26 02:20:02,187 [wrapper] apfmon messages muted
[2025-11-25 21:20:02] 2025-11-26 02:20:02,190 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:20:02] 2025-11-26 02:20:02,192 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:20:02]  *** Error codes and diagnostics ***
[2025-11-25 21:20:02]     "exeErrorCode": 0,
[2025-11-25 21:20:02]     "exeErrorDiag": "",
[2025-11-25 21:20:02]     "pilotErrorCode": 0,
[2025-11-25 21:20:02]     "pilotErrorDiag": "",
[2025-11-25 21:20:02]  *** Listing of results directory ***
[2025-11-25 21:20:02] total 1323704
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 02:53 pilot3.tar.gz
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 03:38 queuedata.json
[2025-11-25 21:20:02] -rwx------ 1 boincer umatlas     36292 Nov 24 03:39 runpilot2-wrapper.sh
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas       100 Nov 25 01:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:20:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 01:43 run_atlas
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas       105 Nov 25 01:43 job.xml
[2025-11-25 21:20:02] -rw-r--r-- 2 boincer umatlas 409337708 Nov 25 01:43 EVNT.47483658._001277.pool.root.1
[2025-11-25 21:20:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:43 start_atlas.sh
[2025-11-25 21:20:02] drwxrwx--x 2 boincer umatlas      4096 Nov 25 01:43 shared
[2025-11-25 21:20:02] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 01:43 input.tar.gz
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas         0 Nov 25 01:43 boinc_lockfile
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 01:43 pandaJob.out
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas        57 Nov 25 01:43 setup.sh.local
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas    991801 Nov 25 01:43 agis_schedconf.cvmfs.json
[2025-11-25 21:20:02] drwx------ 5 boincer umatlas      4096 Nov 25 01:43 pilot3
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas       533 Nov 25 21:02 boinc_task_state.xml
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas      5952 Nov 25 21:11 init_data.xml
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas 918054154 Nov 25 21:18 HITS.47556149._002633.pool.root.1
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas      1068 Nov 25 21:18 memory_monitor_summary.json
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas   1516240 Nov 25 21:19 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas   2323965 Nov 25 21:19 log.47556149._002633.job.log.tgz.1
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas        95 Nov 25 21:19 pilot_heartbeat.json
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas      8661 Nov 25 21:19 heartbeat.json
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 21:19 boinc_mmap_file
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas        29 Nov 25 21:19 wrapper_checkpoint.txt
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas      4821 Nov 25 21:20 pilotlog.txt
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas   9756107 Nov 25 21:20 log.47556149._002633.job.log.1
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas       353 Nov 25 21:20 output.list
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas       620 Nov 25 21:20 runtime_log
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas  12103680 Nov 25 21:20 result.tar.gz
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 21:20 runtime_log.err
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas       668 Nov 25 21:20 aA8KDmnHhh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkyIKDmZq6Pgm.diag
[2025-11-25 21:20:02] -rw-r--r-- 1 boincer umatlas     21294 Nov 25 21:20 stderr.txt
[2025-11-25 21:20:02] HITS file was successfully produced:
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas 918054154 Nov 25 21:18 shared/HITS.pool.root.1
[2025-11-25 21:20:02]  *** Contents of shared directory: ***
[2025-11-25 21:20:02] total 1308704
[2025-11-25 21:20:02] -rw-r--r-- 2 boincer umatlas 409337708 Nov 25 01:43 ATLAS.root_0
[2025-11-25 21:20:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:43 start_atlas.sh
[2025-11-25 21:20:02] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 01:43 input.tar.gz
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas 918054154 Nov 25 21:18 HITS.pool.root.1
[2025-11-25 21:20:02] -rw------- 1 boincer umatlas  12103680 Nov 25 21:20 result.tar.gz
21:20:03 (14355): run_atlas exited; CPU time 538658.333976
21:20:03 (14355): called boinc_finish(0)

</stderr_txt>
]]>

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