Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:25:19 (1050567): wrapper (7.7.26015): starting
02:25:19 (1050567): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 02:25:19] Arguments: --nthreads 3
[2025-11-27 02:25:19] Threads: 3
[2025-11-27 02:25:19] Checking for CVMFS
[2025-11-27 02:25:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 02:25:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 02:25:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 02:25:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 02:25:19] 2.9.2.0 5164 7816 93196 153342 2 81 19665492 36864001 0 130560 0 2900615 99.979 288870 3071 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 02:25:19] CVMFS is ok
[2025-11-27 02:25:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 02:25:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 02:25:19] Further information can be found at the LHC@home message board.
[2025-11-27 02:25:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 02:25:19] Checking for apptainer binary...
[2025-11-27 02:25:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 02:25:19] Running /usr/bin/apptainer --version
[2025-11-27 02:25:19] apptainer version 1.4.1-1.1
[2025-11-27 02:25:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 02:25:19] thA367a
[2025-11-27 02:25:19] apptainer works
[2025-11-27 02:25:19] Set ATHENA_PROC_NUMBER=3
[2025-11-27 02:25:19] Set ATHENA_CORE_NUMBER=3
[2025-11-27 02:25:19] Starting ATLAS job with PandaID=6895328087
[2025-11-27 02:25:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:37:22]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:37:22] 2025-11-27 09:36:49,347 | INFO     | monitor loop #2245: job 0:6895328087 is in state 'finished'
[2025-11-27 10:37:22] 2025-11-27 09:36:49,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:37:22] 2025-11-27 09:36:49,556 | INFO     | time since job start (29484s) is within the limit (172800.0s)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,332 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 10:37:22] 2025-11-27 09:36:51,334 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3743.4800833333334
[2025-11-27 10:37:22] 2025-11-27 09:36:51,335 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895328087/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,335 | INFO     | extracted standard info from prmon json
[2025-11-27 10:37:22] 2025-11-27 09:36:51,335 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:37:22] 2025-11-27 09:36:51,335 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:37:22] 2025-11-27 09:36:51,338 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:37:22] 2025-11-27 09:36:51,338 | INFO     | sum of square deviations: 34939602082.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,340 | INFO     | sum of deviations: 202695863792.99982
[2025-11-27 10:37:22] 2025-11-27 09:36:51,340 | INFO     | mean x: 1764221446.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,340 | INFO     | mean y: 2212467.231884058
[2025-11-27 10:37:22] 2025-11-27 09:36:51,340 | INFO     | intersect: -10232603289.394373
[2025-11-27 10:37:22] 2025-11-27 09:36:51,340 | INFO     | chi2: 3.2393683386414196
[2025-11-27 10:37:22] 2025-11-27 09:36:51,340 | INFO     | sum of square deviations: 33865712179.5
[2025-11-27 10:37:22] 2025-11-27 09:36:51,342 | INFO     | sum of deviations: 245500770556.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,342 | INFO     | mean x: 1764221293.5
[2025-11-27 10:37:22] 2025-11-27 09:36:51,342 | INFO     | mean y: 2218508.39748954
[2025-11-27 10:37:22] 2025-11-27 09:36:51,342 | INFO     | intersect: -12787050020.487398
[2025-11-27 10:37:22] 2025-11-27 09:36:51,342 | INFO     | chi2: 2.3531467731039934
[2025-11-27 10:37:22] 2025-11-27 09:36:51,342 | INFO     | current chi2=2.3531467731039934 (change=27.357851065158727 %)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,343 | INFO     | sum of square deviations: 32814055252.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,344 | INFO     | sum of deviations: 241796191695.00003
[2025-11-27 10:37:22] 2025-11-27 09:36:51,344 | INFO     | mean x: 1764221141.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,345 | INFO     | mean y: 2217971.196617336
[2025-11-27 10:37:22] 2025-11-27 09:36:51,345 | INFO     | intersect: -12997758713.355583
[2025-11-27 10:37:22] 2025-11-27 09:36:51,345 | INFO     | chi2: 2.3520884879393034
[2025-11-27 10:37:22] 2025-11-27 09:36:51,345 | INFO     | current chi2=2.3520884879393034 (change=0.044973189806351184 %)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,345 | INFO     | right removable region: 472
[2025-11-27 10:37:22] 2025-11-27 09:36:51,345 | INFO     | sum of square deviations: 33865712179.5
[2025-11-27 10:37:22] 2025-11-27 09:36:51,347 | INFO     | sum of deviations: 101970112010.50003
[2025-11-27 10:37:22] 2025-11-27 09:36:51,347 | INFO     | mean x: 1764221598.5
[2025-11-27 10:37:22] 2025-11-27 09:36:51,347 | INFO     | mean y: 2226750.0146443513
[2025-11-27 10:37:22] 2025-11-27 09:36:51,347 | INFO     | intersect: -5309868063.077353
[2025-11-27 10:37:22] 2025-11-27 09:36:51,347 | INFO     | chi2: 1.1672227160191815
[2025-11-27 10:37:22] 2025-11-27 09:36:51,347 | INFO     | current chi2=1.1672227160191815 (change=63.967582750755945 %)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,347 | INFO     | sum of square deviations: 32814055252.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,349 | INFO     | sum of deviations: 76161488329.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,349 | INFO     | mean x: 1764221751.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,349 | INFO     | mean y: 2230476.562367865
[2025-11-27 10:37:22] 2025-11-27 09:36:51,349 | INFO     | intersect: -4092531760.7373004
[2025-11-27 10:37:22] 2025-11-27 09:36:51,349 | INFO     | chi2: 0.9567467859100123
[2025-11-27 10:37:22] 2025-11-27 09:36:51,349 | INFO     | current chi2=0.9567467859100123 (change=18.03219961542544 %)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,349 | INFO     | left removable region: 20
[2025-11-27 10:37:22] 2025-11-27 09:36:51,350 | INFO     | sum of square deviations: 28634631773.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,351 | INFO     | sum of deviations: 100287185115.0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,351 | INFO     | mean x: 1764221720.5
[2025-11-27 10:37:22] 2025-11-27 09:36:51,351 | INFO     | mean y: 2238994.5707964604
[2025-11-27 10:37:22] 2025-11-27 09:36:51,351 | INFO     | intersect: -6176601776.642333
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | chi2: 0.05415017031695247
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | current memory leak: 3.50 B/s (using 452 data points, chi2=0.05)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | could have reported an average CPU frequency of 3931 MHz (20 samples)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | ..............................
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | . Timing measurements:
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | . get job = 0 s
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | . initial setup = 1 s
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | . payload setup = 2 s
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | . stage-in = 0 s
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | . payload execution = 29460 s
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | . stage-out = 0 s
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | . log creation = 0 s
[2025-11-27 10:37:22] 2025-11-27 09:36:51,352 | INFO     | ..............................
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | 
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | job summary report
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | --------------------------------------------------
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | PanDA job id: 6895328087
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | task id: 47556137
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | errors: (none)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | pilot state: finished 
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | transexitcode: 0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | exeerrorcode: 0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | exeerrordiag: 
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | exitcode: 0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | exitmsg: OK
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | cpuconsumptiontime: 87103 s
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | nevents: 1000
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | neventsw: 0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | pid: 1060739
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | pgrp: 1060739
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | corecount: 3
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | event service: False
[2025-11-27 10:37:22] 2025-11-27 09:36:51,511 | INFO     | sizes: {0: 2284263, 2: 2284525, 11: 2284553, 29466: 2323709, 29468: 2332709, 29469: 2332765, 29473: 2333139}
[2025-11-27 10:37:22] 2025-11-27 09:36:51,512 | INFO     | --------------------------------------------------
[2025-11-27 10:37:22] 2025-11-27 09:36:51,512 | INFO     | 
[2025-11-27 10:37:22] 2025-11-27 09:36:51,512 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-27 10:37:22] 2025-11-27 09:36:51,526 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | job 6895328087 has completed (purged errors)
[2025-11-27 10:37:22] 2025-11-27 09:36:51,527 | INFO     | overall cleanup function is called
[2025-11-27 10:37:22] 2025-11-27 09:36:52,536 | INFO     | --- collectZombieJob: --- 10, [1060739]
[2025-11-27 10:37:22] 2025-11-27 09:36:52,536 | INFO     | zombie collector waiting for pid 1060739
[2025-11-27 10:37:22] 2025-11-27 09:36:52,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:37:22] 2025-11-27 09:36:52,537 | INFO     | collected zombie processes
[2025-11-27 10:37:22] 2025-11-27 09:36:52,537 | INFO     | will attempt to kill all subprocesses of pid=1060739
[2025-11-27 10:37:22] 2025-11-27 09:36:52,580 | INFO     | process IDs to be killed: [1060739] (in reverse order)
[2025-11-27 10:37:22] 2025-11-27 09:36:52,604 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:37:22] 2025-11-27 09:36:52,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:37:22] 2025-11-27 09:36:52,606 | INFO     | did not find any defunct processes belonging to 1060739
[2025-11-27 10:37:22] 2025-11-27 09:36:52,607 | INFO     | did not find any defunct processes belonging to 1060739
[2025-11-27 10:37:22] 2025-11-27 09:36:52,607 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:37:22] 2025-11-27 09:36:52,607 | INFO     | ready for new job
[2025-11-27 10:37:22] 2025-11-27 09:36:52,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:37:22] 2025-11-27 09:36:52,609 | INFO     | ***************************************
[2025-11-27 10:37:22] 2025-11-27 09:36:52,609 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:37:22] 2025-11-27 09:36:52,609 | INFO     | ***************************************
[2025-11-27 10:37:22] 2025-11-27 09:36:52,609 | INFO     | 
[2025-11-27 10:37:22] 2025-11-27 09:36:52,609 | INFO     | architecture information:
[2025-11-27 10:37:22] 2025-11-27 09:36:52,609 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:37:22] 2025-11-27 09:36:52,617 | INFO     | cat /etc/os-release:
[2025-11-27 10:37:22] NAME="CentOS Linux"
[2025-11-27 10:37:22] VERSION="7 (Core)"
[2025-11-27 10:37:22] ID="centos"
[2025-11-27 10:37:22] ID_LIKE="rhel fedora"
[2025-11-27 10:37:22] VERSION_ID="7"
[2025-11-27 10:37:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:37:22] ANSI_COLOR="0;31"
[2025-11-27 10:37:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:37:22] HOME_URL="https://www.centos.org/"
[2025-11-27 10:37:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:37:22] 
[2025-11-27 10:37:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:37:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:37:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:37:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:37:22] 
[2025-11-27 10:37:22] 2025-11-27 09:36:52,618 | INFO     | ***************************************
[2025-11-27 10:37:22] 2025-11-27 09:36:53,121 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 10:37:22] 2025-11-27 09:36:53,134 | INFO     | sufficient remaining disk space (237049479168 B)
[2025-11-27 10:37:22] 2025-11-27 09:36:53,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:37:22] 2025-11-27 09:36:53,134 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:37:22] 2025-11-27 09:36:53,134 | INFO     | update_server=False
[2025-11-27 10:37:22] 2025-11-27 09:36:53,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:37:22] 2025-11-27 09:36:53,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:37:22] 2025-11-27 09:36:53,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:37:22] 2025-11-27 09:36:53,135 | INFO     | aborting loop
[2025-11-27 10:37:22] 2025-11-27 09:36:53,150 | INFO     | all payload control threads have been joined
[2025-11-27 10:37:22] 2025-11-27 09:36:53,392 | INFO     | all data control threads have been joined
[2025-11-27 10:37:22] 2025-11-27 09:36:53,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:37:22] 2025-11-27 09:36:54,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:37:22] 2025-11-27 09:36:54,140 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:54,140 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:54,140 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:54,155 | INFO     | [payload] control thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:54,208 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:54,212 | INFO     | all job control threads have been joined
[2025-11-27 10:37:22] 2025-11-27 09:36:54,397 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:54,397 | INFO     | [data] control thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:54,660 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:55,020 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:55,218 | INFO     | [job] control thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:55,290 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:55,552 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:55,588 | INFO     | [job] validate thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:56,088 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:36:57,539 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:37:03,451 | INFO     | job.realtimelogging is not enabled
[2025-11-27 10:37:22] 2025-11-27 09:37:04,457 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:37:22] 2025-11-27 09:37:07,402 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:37:22] 2025-11-27 09:37:08,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110755841856)>', '<ExcThread(monitor, started 140110272124672)>']
[2025-11-27 10:37:22] 2025-11-27 09:37:13,642 | INFO     | all workflow threads have been joined
[2025-11-27 10:37:22] 2025-11-27 09:37:13,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:37:22] 2025-11-27 09:37:13,642 | INFO     | traces error code: 0
[2025-11-27 10:37:22] 2025-11-27 09:37:13,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:37:22] 2025-11-27 09:37:22,671 | INFO     | PID=1054292 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:37:22] 2025-11-27 09:37:22,671 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:37:22] 2025-11-27 09:37:22,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:37:22] 2025-11-27 09:37:22,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:37:22] 2025-11-27 09:37:22,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:37:22] 2025-11-27 09:37:22,671 | INFO     | [monitor] control thread has ended
[2025-11-27 10:37:22] 2025-11-27 09:37:22,718 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:37:22] 2025-11-27 09:37:22,720 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:37:22] 2025-11-27 09:37:22,723 [wrapper] pilotpid: 1054292
[2025-11-27 10:37:22] 2025-11-27 09:37:22,725 [wrapper] Pilot exit status: 0
[2025-11-27 10:37:22] 2025-11-27 09:37:22,732 [wrapper] pandaids: 6895328087
[2025-11-27 10:37:22] 2025-11-27 09:37:22,748 [wrapper] cleanup supervisor_pilot 1111185 1054293
[2025-11-27 10:37:22] 2025-11-27 09:37:22,750 [wrapper] Test setup, not cleaning
[2025-11-27 10:37:22] 2025-11-27 09:37:22,753 [wrapper] apfmon messages muted
[2025-11-27 10:37:22] 2025-11-27 09:37:22,755 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:37:22] 2025-11-27 09:37:22,757 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:37:22]  *** Error codes and diagnostics ***
[2025-11-27 10:37:22]     "exeErrorCode": 0,
[2025-11-27 10:37:22]     "exeErrorDiag": "",
[2025-11-27 10:37:22]     "pilotErrorCode": 0,
[2025-11-27 10:37:22]     "pilotErrorDiag": "",
[2025-11-27 10:37:22]  *** Listing of results directory ***
[2025-11-27 10:37:22] total 1321324
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc      5112 Nov 21 17:14 queuedata.json
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc    576529 Nov 21 17:16 pilot3.tar.gz
[2025-11-27 10:37:22] -rwx------ 1 boinc boinc     36292 Nov 21 17:21 runpilot2-wrapper.sh
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc       100 Nov 27 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:37:22] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 02:25 run_atlas
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc       105 Nov 27 02:25 job.xml
[2025-11-27 10:37:22] -rw-r--r-- 2 boinc boinc 411165397 Nov 27 02:25 EVNT.47483658._000062.pool.root.1
[2025-11-27 10:37:22] -rw-r--r-- 2 boinc boinc    590099 Nov 27 02:25 input.tar.gz
[2025-11-27 10:37:22] -rw-r--r-- 2 boinc boinc     15847 Nov 27 02:25 start_atlas.sh
[2025-11-27 10:37:22] drwxrwx--x 2 boinc boinc      4096 Nov 27 02:25 shared
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc         0 Nov 27 02:25 boinc_setup_complete
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc      6441 Nov 27 02:25 init_data.xml
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc         0 Nov 27 02:25 boinc_lockfile
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc      2783 Nov 27 02:25 pandaJob.out
[2025-11-27 10:37:22] -rw------- 1 boinc boinc    991530 Nov 27 02:25 agis_schedconf.cvmfs.json
[2025-11-27 10:37:22] drwx------ 5 boinc boinc      4096 Nov 27 02:25 pilot3
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc       532 Nov 27 10:33 boinc_task_state.xml
[2025-11-27 10:37:22] -rw------- 1 boinc boinc 927317769 Nov 27 10:36 HITS.47556137._000615.pool.root.1
[2025-11-27 10:37:22] -rw------- 1 boinc boinc      1027 Nov 27 10:36 memory_monitor_summary.json
[2025-11-27 10:37:22] -rw------- 1 boinc boinc   1516240 Nov 27 10:36 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:37:22] -rw------- 1 boinc boinc   1167570 Nov 27 10:36 log.47556137._000615.job.log.tgz.1
[2025-11-27 10:37:22] -rw------- 1 boinc boinc        95 Nov 27 10:36 pilot_heartbeat.json
[2025-11-27 10:37:22] -rw------- 1 boinc boinc      8576 Nov 27 10:36 heartbeat.json
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc      8192 Nov 27 10:37 boinc_mmap_file
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc        28 Nov 27 10:37 wrapper_checkpoint.txt
[2025-11-27 10:37:22] -rw------- 1 boinc boinc       747 Nov 27 10:37 pilotlog.txt
[2025-11-27 10:37:22] -rw------- 1 boinc boinc   4151133 Nov 27 10:37 log.47556137._000615.job.log.1
[2025-11-27 10:37:22] -rw------- 1 boinc boinc       353 Nov 27 10:37 output.list
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc       620 Nov 27 10:37 runtime_log
[2025-11-27 10:37:22] -rw------- 1 boinc boinc   5335040 Nov 27 10:37 result.tar.gz
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc      8903 Nov 27 10:37 runtime_log.err
[2025-11-27 10:37:22] -rw------- 1 boinc boinc       666 Nov 27 10:37 ctsNDmz3ig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1XJKDmolrOKm.diag
[2025-11-27 10:37:22] -rw-r--r-- 1 boinc boinc     21236 Nov 27 10:37 stderr.txt
[2025-11-27 10:37:22] HITS file was successfully produced:
[2025-11-27 10:37:22] -rw------- 1 boinc boinc 927317769 Nov 27 10:36 shared/HITS.pool.root.1
[2025-11-27 10:37:22]  *** Contents of shared directory: ***
[2025-11-27 10:37:22] total 1312932
[2025-11-27 10:37:22] -rw-r--r-- 2 boinc boinc 411165397 Nov 27 02:25 ATLAS.root_0
[2025-11-27 10:37:22] -rw-r--r-- 2 boinc boinc    590099 Nov 27 02:25 input.tar.gz
[2025-11-27 10:37:22] -rw-r--r-- 2 boinc boinc     15847 Nov 27 02:25 start_atlas.sh
[2025-11-27 10:37:22] -rw------- 1 boinc boinc 927317769 Nov 27 10:36 HITS.pool.root.1
[2025-11-27 10:37:22] -rw------- 1 boinc boinc   5335040 Nov 27 10:37 result.tar.gz
10:37:24 (1050567): run_atlas exited; CPU time 87131.399340
10:37:24 (1050567): called boinc_finish(0)

</stderr_txt>
]]>

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