Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:23:45 (2300151): wrapper (7.7.26015): starting
21:23:45 (2300151): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 21:23:45] Arguments: --nthreads 4
[2025-11-27 21:23:45] Threads: 4
[2025-11-27 21:23:45] Checking for CVMFS
[2025-11-27 21:23:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 21:23:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 21:23:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 21:23:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 21:23:46] 2.13.3.0 3171430 4644 57504 153360 1 82 5377359 6144000 3336 130560 2 8076401 99.994 282431 70 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-11-27 21:23:46] CVMFS is ok
[2025-11-27 21:23:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 21:23:46] Checking for apptainer binary...
[2025-11-27 21:23:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 21:23:46] Running /usr/bin/apptainer --version
[2025-11-27 21:23:46] apptainer version 1.4.0
[2025-11-27 21:23:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 21:23:46] Zen
[2025-11-27 21:23:46] apptainer works
[2025-11-27 21:23:46] Set ATHENA_PROC_NUMBER=4
[2025-11-27 21:23:46] Set ATHENA_CORE_NUMBER=4
[2025-11-27 21:23:46] Starting ATLAS job with PandaID=6891571617
[2025-11-27 21:23:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 06:39:02]  *** The last 200 lines of the pilot log: ***
[2025-11-28 06:39:02] 2025-11-27 19:38:20,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 06:39:02] 2025-11-27 19:38:20,071 | INFO     | fitting pss+swap vs Time
[2025-11-28 06:39:02] 2025-11-27 19:38:20,072 | INFO     | sum of square deviations: 50195726851.99347
[2025-11-28 06:39:02] 2025-11-27 19:38:20,076 | INFO     | sum of deviations: 261802026974.56516
[2025-11-28 06:39:02] 2025-11-27 19:38:20,076 | INFO     | mean x: 1764255660.0036697
[2025-11-28 06:39:02] 2025-11-27 19:38:20,076 | INFO     | mean y: 2236927.7174311928
[2025-11-28 06:39:02] 2025-11-27 19:38:20,077 | INFO     | intersect: -9199456858.931395
[2025-11-28 06:39:02] 2025-11-27 19:38:20,077 | INFO     | chi2: 6.7530301499241965
[2025-11-28 06:39:02] 2025-11-27 19:38:20,077 | INFO     | sum of square deviations: 48826827376.99242
[2025-11-28 06:39:02] 2025-11-27 19:38:20,082 | INFO     | sum of deviations: 392444551337.69666
[2025-11-28 06:39:02] 2025-11-27 19:38:20,082 | INFO     | mean x: 1764255507.5037036
[2025-11-28 06:39:02] 2025-11-27 19:38:20,082 | INFO     | mean y: 2251483.401851852
[2025-11-28 06:39:02] 2025-11-27 19:38:20,082 | INFO     | intersect: -14177913362.074114
[2025-11-28 06:39:02] 2025-11-27 19:38:20,082 | INFO     | chi2: 4.183772423152846
[2025-11-28 06:39:02] 2025-11-27 19:38:20,082 | INFO     | current chi2=4.183772423152846 (change=38.04599816276831 %)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,083 | INFO     | sum of square deviations: 47483044651.99306
[2025-11-28 06:39:02] 2025-11-27 19:38:20,087 | INFO     | sum of deviations: 408512981938.80927
[2025-11-28 06:39:02] 2025-11-27 19:38:20,087 | INFO     | mean x: 1764255355.0037384
[2025-11-28 06:39:02] 2025-11-27 19:38:20,087 | INFO     | mean y: 2253295.0953271026
[2025-11-28 06:39:02] 2025-11-27 19:38:20,087 | INFO     | intersect: -15176242971.441744
[2025-11-28 06:39:02] 2025-11-27 19:38:20,087 | INFO     | chi2: 4.044821012247566
[2025-11-28 06:39:02] 2025-11-27 19:38:20,087 | INFO     | current chi2=4.044821012247566 (change=3.32119907230919 %)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,087 | INFO     | right removable region: 534
[2025-11-28 06:39:02] 2025-11-27 19:38:20,088 | INFO     | sum of square deviations: 48826826156.99242
[2025-11-28 06:39:02] 2025-11-27 19:38:20,092 | INFO     | sum of deviations: 127587870865.90384
[2025-11-28 06:39:02] 2025-11-27 19:38:20,092 | INFO     | mean x: 1764255812.5037036
[2025-11-28 06:39:02] 2025-11-27 19:38:20,092 | INFO     | mean y: 2251868.298148148
[2025-11-28 06:39:02] 2025-11-27 19:38:20,092 | INFO     | intersect: -4607870486.498958
[2025-11-28 06:39:02] 2025-11-27 19:38:20,093 | INFO     | chi2: 4.0435707391729885
[2025-11-28 06:39:02] 2025-11-27 19:38:20,093 | INFO     | current chi2=4.0435707391729885 (change=40.1221281498591 %)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,093 | INFO     | sum of square deviations: 47483042211.99306
[2025-11-28 06:39:02] 2025-11-27 19:38:20,097 | INFO     | sum of deviations: 38876046602.39809
[2025-11-28 06:39:02] 2025-11-27 19:38:20,097 | INFO     | mean x: 1764255965.0037384
[2025-11-28 06:39:02] 2025-11-27 19:38:20,097 | INFO     | mean y: 2261919.300934579
[2025-11-28 06:39:02] 2025-11-27 19:38:20,097 | INFO     | intersect: -1442196858.3786612
[2025-11-28 06:39:02] 2025-11-27 19:38:20,098 | INFO     | chi2: 2.784193735731131
[2025-11-28 06:39:02] 2025-11-27 19:38:20,098 | INFO     | current chi2=2.784193735731131 (change=31.14517056030116 %)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,098 | INFO     | sum of square deviations: 46164142454.49207
[2025-11-28 06:39:02] 2025-11-27 19:38:20,102 | INFO     | sum of deviations: 26622870896.307537
[2025-11-28 06:39:02] 2025-11-27 19:38:20,102 | INFO     | mean x: 1764256117.5037737
[2025-11-28 06:39:02] 2025-11-27 19:38:20,102 | INFO     | mean y: 2263334.096226415
[2025-11-28 06:39:02] 2025-11-27 19:38:20,103 | INFO     | intersect: -1015183548.8524961
[2025-11-28 06:39:02] 2025-11-27 19:38:20,103 | INFO     | chi2: 2.769251819328566
[2025-11-28 06:39:02] 2025-11-27 19:38:20,103 | INFO     | current chi2=2.769251819328566 (change=0.536669421053814 %)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,103 | INFO     | left removable region: 30
[2025-11-28 06:39:02] 2025-11-27 19:38:20,103 | INFO     | sum of square deviations: 39698002123.99193
[2025-11-28 06:39:02] 2025-11-27 19:38:20,107 | INFO     | sum of deviations: 150387943579.28967
[2025-11-28 06:39:02] 2025-11-27 19:38:20,107 | INFO     | mean x: 1764256239.5039682
[2025-11-28 06:39:02] 2025-11-27 19:38:20,107 | INFO     | mean y: 2283410.60515873
[2025-11-28 06:39:02] 2025-11-27 19:38:20,107 | INFO     | intersect: -6681248596.301096
[2025-11-28 06:39:02] 2025-11-27 19:38:20,108 | INFO     | chi2: 0.017235821757163622
[2025-11-28 06:39:02] 2025-11-27 19:38:20,108 | INFO     | current memory leak: 3.79 B/s (using 504 data points, chi2=0.02)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,108 | INFO     | could have reported an average CPU frequency of 4257 MHz (22 samples)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,108 | INFO     | ..............................
[2025-11-28 06:39:02] 2025-11-27 19:38:20,108 | INFO     | . Timing measurements:
[2025-11-28 06:39:02] 2025-11-27 19:38:20,109 | INFO     | . get job = 0 s
[2025-11-28 06:39:02] 2025-11-27 19:38:20,109 | INFO     | . initial setup = 9 s
[2025-11-28 06:39:02] 2025-11-27 19:38:20,109 | INFO     | . payload setup = 6 s
[2025-11-28 06:39:02] 2025-11-27 19:38:20,109 | INFO     | . stage-in = 0 s
[2025-11-28 06:39:02] 2025-11-27 19:38:20,109 | INFO     | . payload execution = 33219 s
[2025-11-28 06:39:02] 2025-11-27 19:38:20,109 | INFO     | . stage-out = 5 s
[2025-11-28 06:39:02] 2025-11-27 19:38:20,109 | INFO     | . log creation = 0 s
[2025-11-28 06:39:02] 2025-11-27 19:38:20,109 | INFO     | ..............................
[2025-11-28 06:39:02] 2025-11-27 19:38:20,167 | INFO     | 
[2025-11-28 06:39:02] 2025-11-27 19:38:20,167 | INFO     | job summary report
[2025-11-28 06:39:02] 2025-11-27 19:38:20,167 | INFO     | --------------------------------------------------
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | PanDA job id: 6891571617
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | task id: 47493068
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | errors: (none)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | pilot state: finished 
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | transexitcode: 0
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | exeerrorcode: 0
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | exeerrordiag: 
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | exitcode: 0
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | exitmsg: OK
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | cpuconsumptiontime: 129712 s
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | nevents: 1000
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | neventsw: 0
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | pid: 2310596
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | pgrp: 2310596
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | corecount: 4
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | event service: False
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | sizes: {0: 2284315, 3: 2284577, 11: 2284605, 33229: 2325322, 33235: 2334338, 33238: 2334394, 33242: 2334768}
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | --------------------------------------------------
[2025-11-28 06:39:02] 2025-11-27 19:38:20,168 | INFO     | 
[2025-11-28 06:39:02] 2025-11-27 19:38:20,169 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/3
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,187 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,187 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 06:39:02] 2025-11-27 19:38:20,187 | INFO     | job 6891571617 has completed (purged errors)
[2025-11-28 06:39:02] 2025-11-27 19:38:20,187 | INFO     | overall cleanup function is called
[2025-11-28 06:39:02] 2025-11-27 19:38:21,199 | INFO     | --- collectZombieJob: --- 10, [2310596]
[2025-11-28 06:39:02] 2025-11-27 19:38:21,199 | INFO     | zombie collector waiting for pid 2310596
[2025-11-28 06:39:02] 2025-11-27 19:38:21,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 06:39:02] 2025-11-27 19:38:21,199 | INFO     | collected zombie processes
[2025-11-28 06:39:02] 2025-11-27 19:38:21,199 | INFO     | will attempt to kill all subprocesses of pid=2310596
[2025-11-28 06:39:02] 2025-11-27 19:38:21,337 | INFO     | process IDs to be killed: [2310596] (in reverse order)
[2025-11-28 06:39:02] 2025-11-27 19:38:21,389 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 06:39:02] 2025-11-27 19:38:21,390 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 06:39:02] 2025-11-27 19:38:21,394 | INFO     | did not find any defunct processes belonging to 2310596
[2025-11-28 06:39:02] 2025-11-27 19:38:21,397 | INFO     | did not find any defunct processes belonging to 2310596
[2025-11-28 06:39:02] 2025-11-27 19:38:21,398 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 06:39:02] 2025-11-27 19:38:21,398 | INFO     | ready for new job
[2025-11-28 06:39:02] 2025-11-27 19:38:21,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 06:39:02] 2025-11-27 19:38:21,402 | INFO     | ***************************************
[2025-11-28 06:39:02] 2025-11-27 19:38:21,402 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 06:39:02] 2025-11-27 19:38:21,402 | INFO     | ***************************************
[2025-11-28 06:39:02] 2025-11-27 19:38:21,402 | INFO     | 
[2025-11-28 06:39:02] 2025-11-27 19:38:21,403 | INFO     | architecture information:
[2025-11-28 06:39:02] 2025-11-27 19:38:21,403 | INFO     | executing command: cat /etc/os-release
[2025-11-28 06:39:02] 2025-11-27 19:38:21,416 | INFO     | cat /etc/os-release:
[2025-11-28 06:39:02] NAME="CentOS Linux"
[2025-11-28 06:39:02] VERSION="7 (Core)"
[2025-11-28 06:39:02] ID="centos"
[2025-11-28 06:39:02] ID_LIKE="rhel fedora"
[2025-11-28 06:39:02] VERSION_ID="7"
[2025-11-28 06:39:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 06:39:02] ANSI_COLOR="0;31"
[2025-11-28 06:39:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 06:39:02] HOME_URL="https://www.centos.org/"
[2025-11-28 06:39:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 06:39:02] 
[2025-11-28 06:39:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 06:39:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 06:39:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 06:39:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 06:39:02] 
[2025-11-28 06:39:02] 2025-11-27 19:38:21,416 | INFO     | ***************************************
[2025-11-28 06:39:02] 2025-11-27 19:38:21,917 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/3
[2025-11-28 06:39:02] 2025-11-27 19:38:21,931 | INFO     | sufficient remaining disk space (194873655296 B)
[2025-11-28 06:39:02] 2025-11-27 19:38:21,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 06:39:02] 2025-11-27 19:38:21,931 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 06:39:02] 2025-11-27 19:38:21,931 | INFO     | update_server=False
[2025-11-28 06:39:02] 2025-11-27 19:38:21,931 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 06:39:02] 2025-11-27 19:38:21,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:39:02] 2025-11-27 19:38:21,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:39:02] 2025-11-27 19:38:21,932 | INFO     | aborting loop
[2025-11-28 06:39:02] 2025-11-27 19:38:21,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 06:39:02] 2025-11-27 19:38:22,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 06:39:02] 2025-11-27 19:38:22,844 | INFO     | all data control threads have been joined
[2025-11-28 06:39:02] 2025-11-27 19:38:22,933 | INFO     | [job] retrieve thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:22,936 | INFO     | [job] job monitor thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:22,937 | INFO     | [job] queue monitor thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:23,273 | INFO     | all payload control threads have been joined
[2025-11-28 06:39:02] 2025-11-27 19:38:23,318 | INFO     | [payload] failed_post thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:23,570 | INFO     | all job control threads have been joined
[2025-11-28 06:39:02] 2025-11-27 19:38:23,616 | INFO     | [job] validate thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:23,743 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:23,849 | INFO     | [data] control thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:23,926 | INFO     | [payload] validate_post thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:23,930 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:23,948 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:24,240 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:24,278 | INFO     | [payload] control thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:24,356 | INFO     | [data] copytool_in thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:24,572 | INFO     | [job] control thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:24,813 | INFO     | [data] copytool_out thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:25,937 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 06:39:02] 2025-11-27 19:38:52,969 | INFO     | PID=2303973 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 06:39:02] 2025-11-27 19:38:52,969 | INFO     | .. there are 5 such processes running
[2025-11-28 06:39:02] 2025-11-27 19:38:52,969 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 06:39:02] 2025-11-27 19:38:52,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 06:39:02] 2025-11-27 19:38:52,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 06:39:02] 2025-11-27 19:38:54,554 [wrapper] supervise_pilot (15 min periods counter: 38)
[2025-11-28 06:39:02] 2025-11-27 19:38:56,913 | INFO     | [monitor] cgroup control has ended
[2025-11-28 06:39:02] 2025-11-27 19:38:57,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130262120851264)>', '<ExcThread(monitor, started 130261635286784)>']
[2025-11-28 06:39:02] 2025-11-27 19:38:57,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 06:39:02] 2025-11-27 19:38:57,995 | INFO     | [monitor] control thread has ended
[2025-11-28 06:39:02] 2025-11-27 19:39:02,538 | INFO     | all workflow threads have been joined
[2025-11-28 06:39:02] 2025-11-27 19:39:02,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 06:39:02] 2025-11-27 19:39:02,539 | INFO     | traces error code: 0
[2025-11-28 06:39:02] 2025-11-27 19:39:02,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 06:39:02] 2025-11-27 19:39:02,634 [wrapper] ==== pilot stdout END ====
[2025-11-28 06:39:02] 2025-11-27 19:39:02,636 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 06:39:02] 2025-11-27 19:39:02,638 [wrapper] pilotpid: 2303973
[2025-11-28 06:39:02] 2025-11-27 19:39:02,639 [wrapper] Pilot exit status: 0
[2025-11-28 06:39:02] 2025-11-27 19:39:02,646 [wrapper] pandaids: 6891571617
[2025-11-28 06:39:02] 2025-11-27 19:39:02,680 [wrapper] cleanup supervisor_pilot 2731703 2303974
[2025-11-28 06:39:02] 2025-11-27 19:39:02,683 [wrapper] Test setup, not cleaning
[2025-11-28 06:39:02] 2025-11-27 19:39:02,684 [wrapper] apfmon messages muted
[2025-11-28 06:39:02] 2025-11-27 19:39:02,686 [wrapper] ==== wrapper stdout END ====
[2025-11-28 06:39:02] 2025-11-27 19:39:02,688 [wrapper] ==== wrapper stderr END ====
[2025-11-28 06:39:02]  *** Error codes and diagnostics ***
[2025-11-28 06:39:02]     "exeErrorCode": 0,
[2025-11-28 06:39:02]     "exeErrorDiag": "",
[2025-11-28 06:39:02]     "pilotErrorCode": 0,
[2025-11-28 06:39:02]     "pilotErrorDiag": "",
[2025-11-28 06:39:02]  *** Listing of results directory ***
[2025-11-28 06:39:02] total 1309720
[2025-11-28 06:39:02] -rw-r--r-- 1 michael michael    576529 Nov 19 02:47 pilot3.tar.gz
[2025-11-28 06:39:02] -rw-r--r-- 1 michael michael      5112 Nov 19 02:54 queuedata.json
[2025-11-28 06:39:02] -rwx------ 1 michael michael     36292 Nov 19 02:56 runpilot2-wrapper.sh
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael       100 Nov 27 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 06:39:02] -rwxr-xr-x 1 michael michael      7986 Nov 27 21:23 run_atlas
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael       105 Nov 27 21:23 job.xml
[2025-11-28 06:39:02] -rw-r--r-- 2 michael michael 410663854 Nov 27 21:23 EVNT.47493065._000290.pool.root.1
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael      9823 Nov 27 21:23 init_data.xml
[2025-11-28 06:39:02] -rw-r--r-- 2 michael michael    590098 Nov 27 21:23 input.tar.gz
[2025-11-28 06:39:02] drwxrwx--x 2 michael michael      4096 Nov 27 21:23 shared
[2025-11-28 06:39:02] -rw-r--r-- 2 michael michael     15120 Nov 27 21:23 start_atlas.sh
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael         0 Nov 27 21:23 boinc_lockfile
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael      2773 Nov 27 21:23 pandaJob.out
[2025-11-28 06:39:02] -rw------- 1 michael michael    991564 Nov 27 21:23 agis_schedconf.cvmfs.json
[2025-11-28 06:39:02] drwx------ 5 michael michael      4096 Nov 27 21:24 pilot3
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael       533 Nov 28 06:30 boinc_task_state.xml
[2025-11-28 06:39:02] -rw------- 1 michael michael 914175632 Nov 28 06:37 HITS.47493068._002900.pool.root.1
[2025-11-28 06:39:02] -rw------- 1 michael michael      1030 Nov 28 06:38 memory_monitor_summary.json
[2025-11-28 06:39:02] -rw------- 1 michael michael   1516240 Nov 28 06:38 agis_ddmendpoints.agis.ALL.json
[2025-11-28 06:39:02] -rw------- 1 michael michael   1378889 Nov 28 06:38 log.47493068._002900.job.log.tgz.1
[2025-11-28 06:39:02] -rw------- 1 michael michael        95 Nov 28 06:38 pilot_heartbeat.json
[2025-11-28 06:39:02] -rw------- 1 michael michael      8542 Nov 28 06:38 heartbeat.json
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael        29 Nov 28 06:38 wrapper_checkpoint.txt
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael      8192 Nov 28 06:38 boinc_mmap_file
[2025-11-28 06:39:02] -rw------- 1 michael michael      4835 Nov 28 06:39 pilotlog.txt
[2025-11-28 06:39:02] -rw------- 1 michael michael   4813747 Nov 28 06:39 log.47493068._002900.job.log.1
[2025-11-28 06:39:02] -rw------- 1 michael michael       353 Nov 28 06:39 output.list
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael       620 Nov 28 06:39 runtime_log
[2025-11-28 06:39:02] -rw------- 1 michael michael   6215680 Nov 28 06:39 result.tar.gz
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael      8798 Nov 28 06:39 runtime_log.err
[2025-11-28 06:39:02] -rw------- 1 michael michael       648 Nov 28 06:39 bEAMDmXFdf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAQFKDmn0A73n.diag
[2025-11-28 06:39:02] -rw-rw-r-- 1 michael michael     20815 Nov 28 06:39 stderr.txt
[2025-11-28 06:39:02] HITS file was successfully produced:
[2025-11-28 06:39:02] -rw------- 1 michael michael 914175632 Nov 28 06:37 shared/HITS.pool.root.1
[2025-11-28 06:39:02]  *** Contents of shared directory: ***
[2025-11-28 06:39:02] total 1300468
[2025-11-28 06:39:02] -rw-r--r-- 2 michael michael 410663854 Nov 27 21:23 ATLAS.root_0
[2025-11-28 06:39:02] -rw-r--r-- 2 michael michael    590098 Nov 27 21:23 input.tar.gz
[2025-11-28 06:39:02] -rw-r--r-- 2 michael michael     15120 Nov 27 21:23 start_atlas.sh
[2025-11-28 06:39:02] -rw------- 1 michael michael 914175632 Nov 28 06:37 HITS.pool.root.1
[2025-11-28 06:39:02] -rw------- 1 michael michael   6215680 Nov 28 06:39 result.tar.gz
06:39:04 (2300151): run_atlas exited; CPU time 129841.818587
06:39:04 (2300151): called boinc_finish(0)

</stderr_txt>
]]>

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