Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:33:34 (1699395): wrapper (7.7.26015): starting
22:33:34 (1699395): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:33:34] Arguments: --nthreads 8
[2025-11-24 22:33:34] Threads: 8
[2025-11-24 22:33:34] Checking for CVMFS
[2025-11-24 22:33:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:33:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:33:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:33:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:33:35] 2.11.3.0 476926 26592 208196 153273 1 306 40905816 45568000 11644 130560 0 175789686 99.790 116433638 20338 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-24 22:33:35] CVMFS is ok
[2025-11-24 22:33:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:33:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:33:35] Further information can be found at the LHC@home message board.
[2025-11-24 22:33:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:33:35] Checking for apptainer binary...
[2025-11-24 22:33:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:33:35] Running /usr/bin/apptainer --version
[2025-11-24 22:33:35] apptainer version 1.4.1-1.el9
[2025-11-24 22:33:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:33:35] wns0002.triumf.lcg
[2025-11-24 22:33:35] apptainer works
[2025-11-24 22:33:35] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:33:35] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:33:35] Starting ATLAS job with PandaID=6896218901
[2025-11-24 22:33:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:38:57]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | ..............................
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . Timing measurements:
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . get job = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . initial setup = 3 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . payload setup = 9 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . stage-in = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . payload execution = 103 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . stage-out = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . log creation = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | ..............................
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896218901/pilotlog.txt
[2025-11-24 22:38:57] 2025-11-25 06:38:11,419 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 22:38:57] - Log from pilotlog.txt -
[2025-11-24 22:38:57] 2025-11-25 06:38:11,405 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896218901/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,406 | INFO     | extracted standard info from prmon json
[2025-11-24 22:38:57] 2025-11-25 06:38:11,406 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:38:57] 2025-11-25 06:38:11,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:38:57] 2025-11-25 06:38:11,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 22:38:57] 2025-11-25 06:38:11,407 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 22:38:57] 2025-11-25 06:38:11,407 | WARNING  | wrong length of table data, x=[1764052464.0, 1764052525.0], y=[3828.0, 371548.0] (must be same and length>=4)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | ..............................
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . Timing measurements:
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . get job = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . initial setup = 3 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . payload setup = 9 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . stage-in = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . payload execution = 103 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . stage-out = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . log creation = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | ..............................
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896218901/pilotlog.txt
[2025-11-24 22:38:57] 2025-11-25 06:38:11,420 | WARNING  | 
[2025-11-24 22:38:57] [begin log extracts]
[2025-11-24 22:38:57] - Log from pilotlog.txt -
[2025-11-24 22:38:57] 2025-11-25 06:38:11,405 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896218901/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,406 | INFO     | extracted standard info from prmon json
[2025-11-24 22:38:57] 2025-11-25 06:38:11,406 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:38:57] 2025-11-25 06:38:11,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:38:57] 2025-11-25 06:38:11,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 22:38:57] 2025-11-25 06:38:11,407 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 22:38:57] 2025-11-25 06:38:11,407 | WARNING  | wrong length of table data, x=[1764052464.0, 1764052525.0], y=[3828.0, 371548.0] (must be same and length>=4)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | ..............................
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . Timing measurements:
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . get job = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . initial setup = 3 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,408 | INFO     | . payload setup = 9 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . stage-in = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . payload execution = 103 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . stage-out = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | . log creation = 0 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | ..............................
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 22:38:57] 2025-11-25 06:38:11,409 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896218901/pilotlog.txt
[2025-11-24 22:38:57] [end log extracts]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,420 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,420 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 22:38:57] 2025-11-25 06:38:11,494 | INFO     | 
[2025-11-24 22:38:57] 2025-11-25 06:38:11,494 | INFO     | job summary report
[2025-11-24 22:38:57] 2025-11-25 06:38:11,494 | INFO     | --------------------------------------------------
[2025-11-24 22:38:57] 2025-11-25 06:38:11,494 | INFO     | PanDA job id: 6896218901
[2025-11-24 22:38:57] 2025-11-25 06:38:11,494 | INFO     | task id: 47556161
[2025-11-24 22:38:57] 2025-11-25 06:38:11,494 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 22:35:56,022 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 22:38:57] 2025-11-25 06:38:11,494 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 22:38:57] 2025-11-25 06:38:11,494 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | pilot state: failed 
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | transexitcode: 65
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | exeerrorcode: 65
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | exitcode: 65
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | cpuconsumptiontime: 53 s
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | nevents: 0
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | neventsw: 0
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | pid: 1709593
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | pgrp: 1709593
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | corecount: 8
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | event service: False
[2025-11-24 22:38:57] 2025-11-25 06:38:11,495 | INFO     | sizes: {0: 2284134, 1: 2284333, 7: 2284595, 11: 2284623, 116: 2310042, 118: 2314332, 121: 2314516, 244: 2314682}
[2025-11-24 22:38:57] 2025-11-25 06:38:11,496 | INFO     | --------------------------------------------------
[2025-11-24 22:38:57] 2025-11-25 06:38:11,496 | INFO     | 
[2025-11-24 22:38:57] 2025-11-25 06:38:11,496 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 22:38:57] 2025-11-25 06:38:11,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,516 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,516 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:38:57] 2025-11-25 06:38:11,517 | INFO     | job 6896218901 has completed (purged errors)
[2025-11-24 22:38:57] 2025-11-25 06:38:11,518 | INFO     | overall cleanup function is called
[2025-11-24 22:38:57] 2025-11-25 06:38:12,525 | INFO     | --- collectZombieJob: --- 10, [1709593]
[2025-11-24 22:38:57] 2025-11-25 06:38:12,525 | INFO     | zombie collector waiting for pid 1709593
[2025-11-24 22:38:57] 2025-11-25 06:38:12,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:38:57] 2025-11-25 06:38:12,525 | INFO     | collected zombie processes
[2025-11-24 22:38:57] 2025-11-25 06:38:12,525 | INFO     | will attempt to kill all subprocesses of pid=1709593
[2025-11-24 22:38:57] 2025-11-25 06:38:12,697 | INFO     | process IDs to be killed: [1709593] (in reverse order)
[2025-11-24 22:38:57] 2025-11-25 06:38:12,755 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:38:57] 2025-11-25 06:38:12,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:38:57] 2025-11-25 06:38:12,762 | INFO     | did not find any defunct processes belonging to 1709593
[2025-11-24 22:38:57] 2025-11-25 06:38:12,767 | INFO     | did not find any defunct processes belonging to 1709593
[2025-11-24 22:38:57] 2025-11-25 06:38:12,768 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:38:57] 2025-11-25 06:38:12,768 | INFO     | ready for new job
[2025-11-24 22:38:57] 2025-11-25 06:38:12,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:38:57] 2025-11-25 06:38:12,770 | INFO     | ***************************************
[2025-11-24 22:38:57] 2025-11-25 06:38:12,770 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:38:57] 2025-11-25 06:38:12,770 | INFO     | ***************************************
[2025-11-24 22:38:57] 2025-11-25 06:38:12,770 | INFO     | 
[2025-11-24 22:38:57] 2025-11-25 06:38:12,771 | INFO     | architecture information:
[2025-11-24 22:38:57] 2025-11-25 06:38:12,772 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:38:57] 2025-11-25 06:38:12,788 | INFO     | cat /etc/os-release:
[2025-11-24 22:38:57] NAME="CentOS Linux"
[2025-11-24 22:38:57] VERSION="7 (Core)"
[2025-11-24 22:38:57] ID="centos"
[2025-11-24 22:38:57] ID_LIKE="rhel fedora"
[2025-11-24 22:38:57] VERSION_ID="7"
[2025-11-24 22:38:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:38:57] ANSI_COLOR="0;31"
[2025-11-24 22:38:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:38:57] HOME_URL="https://www.centos.org/"
[2025-11-24 22:38:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:38:57] 
[2025-11-24 22:38:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:38:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:38:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:38:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:38:57] 
[2025-11-24 22:38:57] 2025-11-25 06:38:12,788 | INFO     | ***************************************
[2025-11-24 22:38:57] 2025-11-25 06:38:13,291 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 22:38:57] 2025-11-25 06:38:13,314 | INFO     | sufficient remaining disk space (1053771694080 B)
[2025-11-24 22:38:57] 2025-11-25 06:38:13,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:38:57] 2025-11-25 06:38:13,314 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:38:57] 2025-11-25 06:38:13,314 | INFO     | update_server=False
[2025-11-24 22:38:57] 2025-11-25 06:38:13,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:38:57] 2025-11-25 06:38:13,315 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:38:57] 2025-11-25 06:38:13,337 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 22:38:57] 2025-11-25 06:38:13,337 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 22:38:57] 2025-11-25 06:38:13,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:38:57] 2025-11-25 06:38:13,337 | INFO     | will abort loop
[2025-11-24 22:38:57] 2025-11-25 06:38:13,431 | INFO     | all data control threads have been joined
[2025-11-24 22:38:57] 2025-11-25 06:38:13,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:38:57] 2025-11-25 06:38:13,818 | INFO     | all payload control threads have been joined
[2025-11-24 22:38:57] 2025-11-25 06:38:14,320 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:14,320 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:14,343 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:14,386 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:14,407 | INFO     | all job control threads have been joined
[2025-11-24 22:38:57] 2025-11-25 06:38:14,436 | INFO     | [data] control thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:14,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:14,646 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:14,708 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:14,814 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:14,823 | INFO     | [payload] control thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:15,134 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:15,412 | INFO     | [job] control thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:15,528 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:15,686 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:15,717 | INFO     | [job] validate thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:16,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:38:57] 2025-11-25 06:38:20,104 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:38:57] 2025-11-25 06:38:43,711 | INFO     | PID=1703049 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 22:38:57] 2025-11-25 06:38:43,711 | INFO     | .. there are 19 such processes running
[2025-11-24 22:38:57] 2025-11-25 06:38:43,729 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:38:57] 2025-11-25 06:38:43,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:38:57] 2025-11-25 06:38:43,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:38:57] 2025-11-25 06:38:50,946 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:38:57] 2025-11-25 06:38:51,759 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140108576446272)>', '<ExcThread(monitor, started 140108166571776)>']
[2025-11-24 22:38:57] 2025-11-25 06:38:51,776 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:38:57] 2025-11-25 06:38:51,776 | INFO     | [monitor] control thread has ended
[2025-11-24 22:38:57] 2025-11-25 06:38:56,792 | INFO     | all workflow threads have been joined
[2025-11-24 22:38:57] 2025-11-25 06:38:56,792 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:38:57] 2025-11-25 06:38:56,793 | INFO     | traces error code: 0
[2025-11-24 22:38:57] 2025-11-25 06:38:56,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:38:57] 2025-11-25 06:38:56,916 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:38:57] 2025-11-25 06:38:56,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:38:57] 2025-11-25 06:38:56,921 [wrapper] pilotpid: 1703049
[2025-11-24 22:38:57] 2025-11-25 06:38:56,924 [wrapper] Pilot exit status: 0
[2025-11-24 22:38:57] 2025-11-25 06:38:56,936 [wrapper] pandaids: 6896218901
[2025-11-24 22:38:57] 2025-11-25 06:38:56,980 [wrapper] cleanup supervisor_pilot 1703055 1703050
[2025-11-24 22:38:57] 2025-11-25 06:38:56,982 [wrapper] Test setup, not cleaning
[2025-11-24 22:38:57] 2025-11-25 06:38:56,985 [wrapper] apfmon messages muted
[2025-11-24 22:38:57] 2025-11-25 06:38:57,022 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:38:57] 2025-11-25 06:38:57,062 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:38:57]  *** Error codes and diagnostics ***
[2025-11-24 22:38:57]     "exeErrorCode": 65,
[2025-11-24 22:38:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 22:38:57]     "pilotErrorCode": 1305,
[2025-11-24 22:38:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 22:38:57]  *** Listing of results directory ***
[2025-11-24 22:38:57] total 406252
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc    576529 Nov 24 11:02 pilot3.tar.gz
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc      5112 Nov 24 11:37 queuedata.json
[2025-11-24 22:38:57] -rwx------. 1 boinc boinc     36292 Nov 24 11:39 runpilot2-wrapper.sh
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc       100 Nov 24 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:38:57] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 22:33 run_atlas
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc       105 Nov 24 22:33 job.xml
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc      6444 Nov 24 22:33 init_data.xml
[2025-11-24 22:38:57] -rw-r--r--. 2 boinc boinc 411780370 Nov 24 22:33 EVNT.47483658._002059.pool.root.1
[2025-11-24 22:38:57] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:33 start_atlas.sh
[2025-11-24 22:38:57] drwxrwx--x. 2 boinc boinc      4096 Nov 24 22:33 shared
[2025-11-24 22:38:57] -rw-r--r--. 2 boinc boinc    590108 Nov 24 22:33 input.tar.gz
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc         0 Nov 24 22:33 boinc_lockfile
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc      2785 Nov 24 22:33 pandaJob.out
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc    991801 Nov 24 22:33 agis_schedconf.cvmfs.json
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc   1516227 Nov 24 22:33 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:38:57] drwx------. 5 boinc boinc      4096 Nov 24 22:33 pilot3
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc       525 Nov 24 22:35 boinc_task_state.xml
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc       995 Nov 24 22:36 memory_monitor_summary.json
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc     49257 Nov 24 22:36 log.47556161._000428.job.log.tgz.1
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc        95 Nov 24 22:37 pilot_heartbeat.json
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc     10324 Nov 24 22:38 heartbeat.json
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc        23 Nov 24 22:38 wrapper_checkpoint.txt
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc      8192 Nov 24 22:38 boinc_mmap_file
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc      5009 Nov 24 22:38 pilotlog.txt
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc     99984 Nov 24 22:38 log.47556161._000428.job.log.1
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc       186 Nov 24 22:38 output.list
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc       620 Nov 24 22:38 runtime_log
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc    174080 Nov 24 22:38 result.tar.gz
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc      8634 Nov 24 22:38 runtime_log.err
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc       644 Nov 24 22:38 GJyKDmuarh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSBJKDmrf2Yzn.diag
[2025-11-24 22:38:57] -rw-r--r--. 1 boinc boinc     22437 Nov 24 22:38 stderr.txt
[2025-11-24 22:38:57] No HITS result produced
[2025-11-24 22:38:57]  *** Contents of shared directory: ***
[2025-11-24 22:38:57] total 402904
[2025-11-24 22:38:57] -rw-r--r--. 2 boinc boinc 411780370 Nov 24 22:33 ATLAS.root_0
[2025-11-24 22:38:57] -rw-r--r--. 2 boinc boinc     15847 Nov 24 22:33 start_atlas.sh
[2025-11-24 22:38:57] -rw-r--r--. 2 boinc boinc    590108 Nov 24 22:33 input.tar.gz
[2025-11-24 22:38:57] -rw-------. 1 boinc boinc    174080 Nov 24 22:38 result.tar.gz
22:38:58 (1699395): run_atlas exited; CPU time 53.746320
22:38:58 (1699395): called boinc_finish(0)

</stderr_txt>
]]>

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