Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:48:30 (15353): wrapper (7.7.26015): starting
09:48:30 (15353): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 09:48:30] Arguments: --nthreads 8
[2025-11-27 09:48:30] Threads: 8
[2025-11-27 09:48:30] Checking for CVMFS
[2025-11-27 09:48:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 09:48:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 09:48:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 09:48:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 09:48:33] 2.11.2.0 7908 88876 121376 153357 0 75 12738072 25165824 1288 130560 12 26902665 99.885 16695771 1960 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 09:48:33] CVMFS is ok
[2025-11-27 09:48:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:48:33] Checking for apptainer binary...
[2025-11-27 09:48:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 09:48:33] Running /usr/bin/apptainer --version
[2025-11-27 09:48:33] apptainer version 1.3.2-1.el7
[2025-11-27 09:48:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:48:51] cg-vwn301.simple-grid.lan
[2025-11-27 09:48:51] apptainer works
[2025-11-27 09:48:51] Set ATHENA_PROC_NUMBER=8
[2025-11-27 09:48:51] Set ATHENA_CORE_NUMBER=8
[2025-11-27 09:48:51] Starting ATLAS job with PandaID=6895417901
[2025-11-27 09:48:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 09:22:00]  *** The last 200 lines of the pilot log: ***
[2025-11-28 09:22:00] 2025-11-28 08:20:52,230 | INFO     | monitor loop #5690: job 0:6895417901 is in state 'finished'
[2025-11-28 09:22:00] 2025-11-28 08:20:52,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 09:22:00] 2025-11-28 08:20:53,434 | INFO     | time since job start (84512s) is within the limit (172800.0s)
[2025-11-28 09:22:00] 2025-11-28 08:20:54,741 | INFO     | monitor loop #5691: job 0:6895417901 is in state 'finished'
[2025-11-28 09:22:00] 2025-11-28 08:20:54,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 09:22:00] 2025-11-28 08:20:55,441 | INFO     | time since job start (84514s) is within the limit (172800.0s)
[2025-11-28 09:22:00] 2025-11-28 08:20:55,441 | INFO     | 84521s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-28 09:22:00] 2025-11-28 08:20:57,245 | INFO     | monitor loop #5692: job 0:6895417901 is in state 'finished'
[2025-11-28 09:22:00] 2025-11-28 08:20:57,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 09:22:00] 2025-11-28 08:20:57,453 | INFO     | time since job start (84516s) is within the limit (172800.0s)
[2025-11-28 09:22:00] 2025-11-28 08:20:58,602 | INFO     | PID=19166 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 09:22:00] 2025-11-28 08:20:58,603 | INFO     | .. there are 9 such processes running
[2025-11-28 09:22:00] 2025-11-28 08:20:59,605 | INFO     | time since job start (84518s) is within the limit (172800.0s)
[2025-11-28 09:22:00] 2025-11-28 08:20:59,756 | INFO     | monitor loop #5693: job 0:6895417901 is in state 'finished'
[2025-11-28 09:22:00] 2025-11-28 08:20:59,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 09:22:00] 2025-11-28 08:21:01,614 | INFO     | time since job start (84520s) is within the limit (172800.0s)
[2025-11-28 09:22:00] 2025-11-28 08:21:01,627 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 09:22:00] 2025-11-28 08:21:01,628 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-28 09:22:00] 2025-11-28 08:21:01,630 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895417901/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 09:22:00] 2025-11-28 08:21:01,631 | INFO     | extracted standard info from prmon json
[2025-11-28 09:22:00] 2025-11-28 08:21:01,631 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 09:22:00] 2025-11-28 08:21:01,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 09:22:00] 2025-11-28 08:21:01,663 | INFO     | fitting pss+swap vs Time
[2025-11-28 09:22:00] 2025-11-28 08:21:01,665 | INFO     | sum of square deviations: 807853468937.7152
[2025-11-28 09:22:00] 2025-11-28 08:21:01,750 | INFO     | sum of deviations: 2841096158867.423
[2025-11-28 09:22:00] 2025-11-28 08:21:01,750 | INFO     | mean x: 1764276003.5675871
[2025-11-28 09:22:00] 2025-11-28 08:21:01,750 | INFO     | mean y: 2830538.323401163
[2025-11-28 09:22:00] 2025-11-28 08:21:01,751 | INFO     | intersect: -6201856288.743126
[2025-11-28 09:22:00] 2025-11-28 08:21:01,753 | INFO     | chi2: 24.05314121543289
[2025-11-28 09:22:00] 2025-11-28 08:21:01,755 | INFO     | sum of square deviations: 799079315246.9938
[2025-11-28 09:22:00] 2025-11-28 08:21:01,824 | INFO     | sum of deviations: 3306890412658.131
[2025-11-28 09:22:00] 2025-11-28 08:21:01,825 | INFO     | mean x: 1764275851.0714808
[2025-11-28 09:22:00] 2025-11-28 08:21:01,825 | INFO     | mean y: 2838633.1721371263
[2025-11-28 09:22:00] 2025-11-28 08:21:01,825 | INFO     | intersect: -7298397659.484473
[2025-11-28 09:22:00] 2025-11-28 08:21:01,827 | INFO     | chi2: 20.663274973555993
[2025-11-28 09:22:00] 2025-11-28 08:21:01,827 | INFO     | current chi2=20.663274973555993 (change=14.093237184762813 %)
[2025-11-28 09:22:00] 2025-11-28 08:21:01,827 | INFO     | right removable region: 1370
[2025-11-28 09:22:00] 2025-11-28 08:21:01,829 | INFO     | sum of square deviations: 799078419156.9944
[2025-11-28 09:22:00] 2025-11-28 08:21:01,901 | INFO     | sum of deviations: 2273220581339.452
[2025-11-28 09:22:00] 2025-11-28 08:21:01,902 | INFO     | mean x: 1764276156.0714808
[2025-11-28 09:22:00] 2025-11-28 08:21:01,902 | INFO     | mean y: 2840406.6484318017
[2025-11-28 09:22:00] 2025-11-28 08:21:01,902 | INFO     | intersect: -5016177468.191945
[2025-11-28 09:22:00] 2025-11-28 08:21:01,904 | INFO     | chi2: 19.480498391252535
[2025-11-28 09:22:00] 2025-11-28 08:21:01,904 | INFO     | current chi2=19.480498391252535 (change=19.010584868002493 %)
[2025-11-28 09:22:00] 2025-11-28 08:21:01,904 | INFO     | left removable region: 10
[2025-11-28 09:22:00] 2025-11-28 08:21:01,906 | INFO     | sum of square deviations: 779998523103.2638
[2025-11-28 09:22:00] 2025-11-28 08:21:01,987 | INFO     | sum of deviations: 2362139260863.3457
[2025-11-28 09:22:00] 2025-11-28 08:21:01,988 | INFO     | mean x: 1764276125.580147
[2025-11-28 09:22:00] 2025-11-28 08:21:01,988 | INFO     | mean y: 2858699.4279411766
[2025-11-28 09:22:00] 2025-11-28 08:21:01,988 | INFO     | intersect: -5340056421.303648
[2025-11-28 09:22:00] 2025-11-28 08:21:01,989 | INFO     | chi2: 12.19545881984342
[2025-11-28 09:22:00] 2025-11-28 08:21:01,990 | INFO     | current memory leak: 3.03 B/s (using 1360 data points, chi2=12.20)
[2025-11-28 09:22:00] 2025-11-28 08:21:01,991 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-28 09:22:00] 2025-11-28 08:21:01,991 | INFO     | ..............................
[2025-11-28 09:22:00] 2025-11-28 08:21:01,991 | INFO     | . Timing measurements:
[2025-11-28 09:22:00] 2025-11-28 08:21:01,992 | INFO     | . get job = 0 s
[2025-11-28 09:22:00] 2025-11-28 08:21:01,992 | INFO     | . initial setup = 6 s
[2025-11-28 09:22:00] 2025-11-28 08:21:01,992 | INFO     | . payload setup = 166 s
[2025-11-28 09:22:00] 2025-11-28 08:21:01,992 | INFO     | . stage-in = 0 s
[2025-11-28 09:22:00] 2025-11-28 08:21:01,992 | INFO     | . payload execution = 84057 s
[2025-11-28 09:22:00] 2025-11-28 08:21:01,992 | INFO     | . stage-out = 5 s
[2025-11-28 09:22:00] 2025-11-28 08:21:01,992 | INFO     | . log creation = 2 s
[2025-11-28 09:22:00] 2025-11-28 08:21:01,992 | INFO     | ..............................
[2025-11-28 09:22:00] 2025-11-28 08:21:02,136 | INFO     | 
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | job summary report
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | --------------------------------------------------
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | PanDA job id: 6895417901
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | task id: 47556149
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | errors: (none)
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | pilot state: finished 
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | transexitcode: 0
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | exeerrorcode: 0
[2025-11-28 09:22:00] 2025-11-28 08:21:02,137 | INFO     | exeerrordiag: 
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | exitcode: 0
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | exitmsg: OK
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | cpuconsumptiontime: 316309 s
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | nevents: 1000
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | neventsw: 0
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | pid: 25775
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | pgrp: 25775
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | corecount: 8
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | event service: False
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | sizes: {0: 2284138, 1: 2284337, 12: 2284337, 23: 2284365, 34: 2284393, 44: 2284421, 55: 2284577, 66: 2284605, 76: 2284633, 87: 2245057, 88: 2284979, 98: 2285287, 8
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | --------------------------------------------------
[2025-11-28 09:22:00] 2025-11-28 08:21:02,138 | INFO     | 
[2025-11-28 09:22:00] 2025-11-28 08:21:02,139 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-28 09:22:00] 2025-11-28 08:21:02,593 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,593 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,593 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,593 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,595 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 09:22:00] 2025-11-28 08:21:02,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,595 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 09:22:00] 2025-11-28 08:21:02,595 | INFO     | job 6895417901 has completed (purged errors)
[2025-11-28 09:22:00] 2025-11-28 08:21:02,595 | INFO     | overall cleanup function is called
[2025-11-28 09:22:00] 2025-11-28 08:21:03,613 | INFO     | --- collectZombieJob: --- 10, [25775]
[2025-11-28 09:22:00] 2025-11-28 08:21:03,614 | INFO     | zombie collector waiting for pid 25775
[2025-11-28 09:22:00] 2025-11-28 08:21:03,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 09:22:00] 2025-11-28 08:21:03,614 | INFO     | collected zombie processes
[2025-11-28 09:22:00] 2025-11-28 08:21:03,614 | INFO     | will attempt to kill all subprocesses of pid=25775
[2025-11-28 09:22:00] 2025-11-28 08:21:03,738 | INFO     | process IDs to be killed: [25775] (in reverse order)
[2025-11-28 09:22:00] 2025-11-28 08:21:04,440 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 09:22:00] 2025-11-28 08:21:04,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 09:22:00] 2025-11-28 08:21:04,443 | INFO     | did not find any defunct processes belonging to 25775
[2025-11-28 09:22:00] 2025-11-28 08:21:04,445 | INFO     | did not find any defunct processes belonging to 25775
[2025-11-28 09:22:00] 2025-11-28 08:21:04,509 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 09:22:00] 2025-11-28 08:21:04,509 | INFO     | ready for new job
[2025-11-28 09:22:00] 2025-11-28 08:21:04,509 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 09:22:00] 2025-11-28 08:21:04,514 | INFO     | ***************************************
[2025-11-28 09:22:00] 2025-11-28 08:21:04,514 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 09:22:00] 2025-11-28 08:21:04,514 | INFO     | ***************************************
[2025-11-28 09:22:00] 2025-11-28 08:21:04,514 | INFO     | 
[2025-11-28 09:22:00] 2025-11-28 08:21:04,515 | INFO     | pilot is running in a VM
[2025-11-28 09:22:00] 2025-11-28 08:21:04,515 | INFO     | architecture information:
[2025-11-28 09:22:00] 2025-11-28 08:21:04,527 | INFO     | executing command: cat /etc/os-release
[2025-11-28 09:22:00] 2025-11-28 08:21:04,663 | INFO     | cat /etc/os-release:
[2025-11-28 09:22:00] NAME="CentOS Linux"
[2025-11-28 09:22:00] VERSION="7 (Core)"
[2025-11-28 09:22:00] ID="centos"
[2025-11-28 09:22:00] ID_LIKE="rhel fedora"
[2025-11-28 09:22:00] VERSION_ID="7"
[2025-11-28 09:22:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 09:22:00] ANSI_COLOR="0;31"
[2025-11-28 09:22:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 09:22:00] HOME_URL="https://www.centos.org/"
[2025-11-28 09:22:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 09:22:00] 
[2025-11-28 09:22:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 09:22:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 09:22:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 09:22:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 09:22:00] 
[2025-11-28 09:22:00] 2025-11-28 08:21:04,663 | INFO     | ***************************************
[2025-11-28 09:22:00] 2025-11-28 08:21:05,167 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-28 09:22:00] 2025-11-28 08:21:05,432 | INFO     | sufficient remaining disk space (494869151744 B)
[2025-11-28 09:22:00] 2025-11-28 08:21:05,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 09:22:00] 2025-11-28 08:21:05,433 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 09:22:00] 2025-11-28 08:21:05,433 | INFO     | update_server=False
[2025-11-28 09:22:00] 2025-11-28 08:21:05,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 09:22:00] 2025-11-28 08:21:05,434 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 09:22:00] 2025-11-28 08:21:05,519 | INFO     | all data control threads have been joined
[2025-11-28 09:22:00] 2025-11-28 08:21:05,796 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 09:22:00] 2025-11-28 08:21:05,797 | INFO     | aborting loop
[2025-11-28 09:22:00] 2025-11-28 08:21:06,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 09:22:00] 2025-11-28 08:21:06,304 | INFO     | all payload control threads have been joined
[2025-11-28 09:22:00] 2025-11-28 08:21:06,439 | INFO     | [job] retrieve thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:06,482 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:06,526 | INFO     | [data] control thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:06,634 | INFO     | all job control threads have been joined
[2025-11-28 09:22:00] 2025-11-28 08:21:06,786 | INFO     | [payload] failed_post thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:06,803 | INFO     | [job] job monitor thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:06,907 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:07,031 | INFO     | [job] validate thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:07,056 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:07,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 09:22:00] 2025-11-28 08:21:07,282 | INFO     | [data] copytool_in thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:07,311 | INFO     | [payload] control thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:07,641 | INFO     | [job] control thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:07,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:07,920 | INFO     | [payload] validate_post thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:08,036 | INFO     | [data] copytool_out thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:08,157 | INFO     | [job] queue monitor thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:09,443 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 09:22:00] 2025-11-28 08:21:34,754 | INFO     | PID=19166 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 09:22:00] 2025-11-28 08:21:34,754 | INFO     | .. there are 9 such processes running
[2025-11-28 09:22:00] 2025-11-28 08:21:34,755 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 09:22:00] 2025-11-28 08:21:34,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 09:22:00] 2025-11-28 08:21:34,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 09:22:00] 2025-11-28 08:21:48,445 | INFO     | [monitor] cgroup control has ended
[2025-11-28 09:22:00] 2025-11-28 08:21:50,496 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596199757632)>', '<ExcThread(monitor, started 140595536320256)>']
[2025-11-28 09:22:00] 2025-11-28 08:21:50,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 09:22:00] 2025-11-28 08:21:50,853 | INFO     | [monitor] control thread has ended
[2025-11-28 09:22:00] 2025-11-28 08:21:55,521 | INFO     | all workflow threads have been joined
[2025-11-28 09:22:00] 2025-11-28 08:21:55,522 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 09:22:00] 2025-11-28 08:21:55,522 | INFO     | traces error code: 0
[2025-11-28 09:22:00] 2025-11-28 08:21:55,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 09:22:00] 2025-11-28 08:21:55,928 [wrapper] ==== pilot stdout END ====
[2025-11-28 09:22:00] 2025-11-28 08:21:55,980 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 09:22:00] 2025-11-28 08:21:56,056 [wrapper] pilotpid: 19166
[2025-11-28 09:22:00] 2025-11-28 08:21:56,155 [wrapper] Pilot exit status: 0
[2025-11-28 09:22:00] 2025-11-28 08:21:56,568 [wrapper] pandaids: 6895417901
[2025-11-28 09:22:00] 2025-11-28 08:21:57,496 [wrapper] cleanup supervisor_pilot 29132 19167
[2025-11-28 09:22:00] 2025-11-28 08:21:57,562 [wrapper] Test setup, not cleaning
[2025-11-28 09:22:00] 2025-11-28 08:21:57,628 [wrapper] apfmon messages muted
[2025-11-28 09:22:00] 2025-11-28 08:21:57,710 [wrapper] ==== wrapper stdout END ====
[2025-11-28 09:22:00] 2025-11-28 08:21:57,792 [wrapper] ==== wrapper stderr END ====
[2025-11-28 09:22:00]  *** Error codes and diagnostics ***
[2025-11-28 09:22:00]     "exeErrorCode": 0,
[2025-11-28 09:22:00]     "exeErrorDiag": "",
[2025-11-28 09:22:00]     "pilotErrorCode": 0,
[2025-11-28 09:22:00]     "pilotErrorDiag": "",
[2025-11-28 09:22:00]  *** Listing of results directory ***
[2025-11-28 09:22:00] total 1336292
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc    576529 Nov 24 08:53 pilot3.tar.gz
[2025-11-28 09:22:00] -rwx------. 1 boinc boinc     36292 Nov 24 09:35 runpilot2-wrapper.sh
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc      5112 Nov 24 09:35 queuedata.json
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc       100 Nov 27 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 09:22:00] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 09:48 run_atlas
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc       105 Nov 27 09:48 job.xml
[2025-11-28 09:22:00] -rw-r--r--. 2 boinc boinc 412235543 Nov 27 09:48 EVNT.47483658._001275.pool.root.1
[2025-11-28 09:22:00] -rw-r--r--. 2 boinc boinc     15847 Nov 27 09:48 start_atlas.sh
[2025-11-28 09:22:00] drwxrwx--x. 2 boinc boinc        68 Nov 27 09:48 shared
[2025-11-28 09:22:00] -rw-r--r--. 2 boinc boinc    590105 Nov 27 09:48 input.tar.gz
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc      6391 Nov 27 09:48 init_data.xml
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc         0 Nov 27 09:48 boinc_lockfile
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc      2783 Nov 27 09:48 pandaJob.out
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc    991573 Nov 27 09:52 agis_schedconf.cvmfs.json
[2025-11-28 09:22:00] drwx------. 5 boinc boinc      4096 Nov 27 09:52 pilot3
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc       533 Nov 28 08:51 boinc_task_state.xml
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc 924689617 Nov 28 09:18 HITS.47556149._002611.pool.root.1
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc      1028 Nov 28 09:19 memory_monitor_summary.json
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc   1516240 Nov 28 09:19 agis_ddmendpoints.agis.ALL.json
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc   2469210 Nov 28 09:19 log.47556149._002611.job.log.tgz.1
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc      8625 Nov 28 09:21 heartbeat.json
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc        95 Nov 28 09:21 pilot_heartbeat.json
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc      8192 Nov 28 09:21 boinc_mmap_file
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc        29 Nov 28 09:21 wrapper_checkpoint.txt
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc      4884 Nov 28 09:21 pilotlog.txt
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc  11297653 Nov 28 09:21 log.47556149._002611.job.log.1
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc       353 Nov 28 09:21 output.list
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc       620 Nov 28 09:22 runtime_log
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc  13783040 Nov 28 09:22 result.tar.gz
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc      8817 Nov 28 09:22 runtime_log.err
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc       662 Nov 28 09:22 h8qMDmFEhh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjyIKDmFEpvwn.diag
[2025-11-28 09:22:00] -rw-r--r--. 1 boinc boinc     21529 Nov 28 09:22 stderr.txt
[2025-11-28 09:22:00] HITS file was successfully produced:
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc 924689617 Nov 28 09:18 shared/HITS.pool.root.1
[2025-11-28 09:22:00]  *** Contents of shared directory: ***
[2025-11-28 09:22:00] total 1319652
[2025-11-28 09:22:00] -rw-r--r--. 2 boinc boinc 412235543 Nov 27 09:48 ATLAS.root_0
[2025-11-28 09:22:00] -rw-r--r--. 2 boinc boinc     15847 Nov 27 09:48 start_atlas.sh
[2025-11-28 09:22:00] -rw-r--r--. 2 boinc boinc    590105 Nov 27 09:48 input.tar.gz
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc 924689617 Nov 28 09:18 HITS.pool.root.1
[2025-11-28 09:22:00] -rw-------. 1 boinc boinc  13783040 Nov 28 09:22 result.tar.gz
09:22:02 (15353): run_atlas exited; CPU time 316904.459320
09:22:02 (15353): called boinc_finish(0)

</stderr_txt>
]]>

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