Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:05:03 (17336): wrapper (7.7.26015): starting
01:05:03 (17336): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:05:03] Arguments: --nthreads 8
[2025-11-25 01:05:03] Threads: 8
[2025-11-25 01:05:03] Checking for CVMFS
[2025-11-25 01:05:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:05:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:05:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:05:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:05:03] 2.11.2.0 6956 115833 145716 153272 0 90 12850333 18432000 1475 130560 0 84650529 99.973 4947498 30955 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 01:05:03] CVMFS is ok
[2025-11-25 01:05:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 01:05:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 01:05:03] Further information can be found at the LHC@home message board.
[2025-11-25 01:05:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:05:03] Checking for apptainer binary...
[2025-11-25 01:05:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:05:03] Running /usr/bin/apptainer --version
[2025-11-25 01:05:03] apptainer version 1.3.2-1.el7
[2025-11-25 01:05:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:05:04] c-206-16.aglt2.org
[2025-11-25 01:05:04] apptainer works
[2025-11-25 01:05:04] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:05:04] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:05:04] Starting ATLAS job with PandaID=6895401865
[2025-11-25 01:05:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:46:54 (1330): wrapper (7.7.26015): starting
04:46:54 (1330): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 04:46:54] Arguments: --nthreads 8
[2025-11-25 04:46:54] Threads: 8
[2025-11-25 04:46:54] This job has been restarted, cleaning up previous attempt
[2025-11-25 04:46:54] Checking for CVMFS
[2025-11-25 04:46:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:46:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:46:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:46:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:46:54] 2.11.2.0 6956 116055 137548 153277 3 57 12865257 18432001 1 130560 0 84934760 99.973 4953996 30960 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 04:46:54] CVMFS is ok
[2025-11-25 04:46:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:46:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:46:54] Further information can be found at the LHC@home message board.
[2025-11-25 04:46:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:46:54] Checking for apptainer binary...
[2025-11-25 04:46:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:46:54] Running /usr/bin/apptainer --version
[2025-11-25 04:46:54] apptainer version 1.3.2-1.el7
[2025-11-25 04:46:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:46:56] c-206-16.aglt2.org
[2025-11-25 04:46:56] apptainer works
[2025-11-25 04:46:56] Set ATHENA_PROC_NUMBER=8
[2025-11-25 04:46:56] Set ATHENA_CORE_NUMBER=8
[2025-11-25 04:46:56] Starting ATLAS job with PandaID=6895401865
[2025-11-25 04:46:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:11:02 (16011): wrapper (7.7.26015): starting
11:11:02 (16011): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:11:02] Arguments: --nthreads 8
[2025-11-25 11:11:02] Threads: 8
[2025-11-25 11:11:02] This job has been restarted, cleaning up previous attempt
[2025-11-25 11:11:02] Checking for CVMFS
[2025-11-25 11:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:11:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:11:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:11:03] 2.11.2.0 6956 116439 133116 153287 3 57 12934195 18432000 1 130560 0 85385686 99.973 4968516 30969 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 11:11:03] CVMFS is ok
[2025-11-25 11:11:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:11:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:11:03] Further information can be found at the LHC@home message board.
[2025-11-25 11:11:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:11:03] Checking for apptainer binary...
[2025-11-25 11:11:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:11:03] Running /usr/bin/apptainer --version
[2025-11-25 11:11:03] apptainer version 1.3.2-1.el7
[2025-11-25 11:11:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:11:04] c-206-16.aglt2.org
[2025-11-25 11:11:04] apptainer works
[2025-11-25 11:11:04] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:11:04] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:11:04] Starting ATLAS job with PandaID=6895401865
[2025-11-25 11:11:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:44:20]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:44:20] 2025-11-26 11:43:40,573 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2361.4583333333335
[2025-11-26 06:44:20] 2025-11-26 11:43:40,576 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895401865/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,577 | INFO     | extracted standard info from prmon json
[2025-11-26 06:44:20] 2025-11-26 11:43:40,577 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:44:20] 2025-11-26 11:43:40,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:44:20] 2025-11-26 11:43:40,591 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:44:20] 2025-11-26 11:43:40,593 | INFO     | sum of square deviations: 475295968740.0461
[2025-11-26 06:44:20] 2025-11-26 11:43:40,616 | INFO     | sum of deviations: 2318795078644.396
[2025-11-26 06:44:20] 2025-11-26 11:43:40,616 | INFO     | mean x: 1764122240.753686
[2025-11-26 06:44:20] 2025-11-26 11:43:40,616 | INFO     | mean y: 2863394.554206418
[2025-11-26 06:44:20] 2025-11-26 11:43:40,616 | INFO     | intersect: -8603643369.70591
[2025-11-26 06:44:20] 2025-11-26 11:43:40,617 | INFO     | chi2: 5.6908240297562385
[2025-11-26 06:44:20] 2025-11-26 11:43:40,619 | INFO     | sum of square deviations: 469139597417.19446
[2025-11-26 06:44:20] 2025-11-26 11:43:40,641 | INFO     | sum of deviations: 2671135868495.371
[2025-11-26 06:44:20] 2025-11-26 11:43:40,642 | INFO     | mean x: 1764122088.2569687
[2025-11-26 06:44:20] 2025-11-26 11:43:40,642 | INFO     | mean y: 2872120.141114983
[2025-11-26 06:44:20] 2025-11-26 11:43:40,642 | INFO     | intersect: -10041493804.821924
[2025-11-26 06:44:20] 2025-11-26 11:43:40,643 | INFO     | chi2: 2.9473205038523527
[2025-11-26 06:44:20] 2025-11-26 11:43:40,643 | INFO     | current chi2=2.9473205038523527 (change=48.20924898676583 %)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,644 | INFO     | sum of square deviations: 463036622444.317
[2025-11-26 06:44:20] 2025-11-26 11:43:40,667 | INFO     | sum of deviations: 2799626265927.8936
[2025-11-26 06:44:20] 2025-11-26 11:43:40,667 | INFO     | mean x: 1764121935.76028
[2025-11-26 06:44:20] 2025-11-26 11:43:40,667 | INFO     | mean y: 2875327.4558180226
[2025-11-26 06:44:20] 2025-11-26 11:43:40,667 | INFO     | intersect: -10663412970.826616
[2025-11-26 06:44:20] 2025-11-26 11:43:40,668 | INFO     | chi2: 2.423617776733982
[2025-11-26 06:44:20] 2025-11-26 11:43:40,668 | INFO     | current chi2=2.423617776733982 (change=17.768774262380173 %)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,669 | INFO     | right removable region: 1142
[2025-11-26 06:44:20] 2025-11-26 11:43:40,670 | INFO     | sum of square deviations: 469139137416.70703
[2025-11-26 06:44:20] 2025-11-26 11:43:40,693 | INFO     | sum of deviations: 2033848997913.538
[2025-11-26 06:44:20] 2025-11-26 11:43:40,693 | INFO     | mean x: 1764122393.2560976
[2025-11-26 06:44:20] 2025-11-26 11:43:40,693 | INFO     | mean y: 2870443.423344948
[2025-11-26 06:44:20] 2025-11-26 11:43:40,693 | INFO     | intersect: -7645092123.668531
[2025-11-26 06:44:20] 2025-11-26 11:43:40,694 | INFO     | chi2: 3.7246713177885686
[2025-11-26 06:44:20] 2025-11-26 11:43:40,694 | INFO     | current chi2=3.7246713177885686 (change=34.54952572223338 %)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,695 | INFO     | sum of square deviations: 463035913016.89795
[2025-11-26 06:44:20] 2025-11-26 11:43:40,718 | INFO     | sum of deviations: 1933323205659.227
[2025-11-26 06:44:20] 2025-11-26 11:43:40,718 | INFO     | mean x: 1764122545.7559056
[2025-11-26 06:44:20] 2025-11-26 11:43:40,718 | INFO     | mean y: 2872954.929133858
[2025-11-26 06:44:20] 2025-11-26 11:43:40,719 | INFO     | intersect: -7362903563.602071
[2025-11-26 06:44:20] 2025-11-26 11:43:40,719 | INFO     | chi2: 3.6106328702198796
[2025-11-26 06:44:20] 2025-11-26 11:43:40,720 | INFO     | current chi2=3.6106328702198796 (change=3.061704989217588 %)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,720 | INFO     | left removable region: 20
[2025-11-26 06:44:20] 2025-11-26 11:43:40,721 | INFO     | sum of square deviations: 437980819336.96277
[2025-11-26 06:44:20] 2025-11-26 11:43:40,742 | INFO     | sum of deviations: 2269613238605.1724
[2025-11-26 06:44:20] 2025-11-26 11:43:40,742 | INFO     | mean x: 1764122515.262032
[2025-11-26 06:44:20] 2025-11-26 11:43:40,743 | INFO     | mean y: 2889199.8021390373
[2025-11-26 06:44:20] 2025-11-26 11:43:40,743 | INFO     | intersect: -9138780111.702026
[2025-11-26 06:44:20] 2025-11-26 11:43:40,744 | INFO     | chi2: 0.2214541649673179
[2025-11-26 06:44:20] 2025-11-26 11:43:40,744 | INFO     | current memory leak: 5.18 B/s (using 1122 data points, chi2=0.22)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,745 | INFO     | could have reported an average CPU frequency of 2580 MHz (42 samples)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,745 | INFO     | ..............................
[2025-11-26 06:44:20] 2025-11-26 11:43:40,745 | INFO     | . Timing measurements:
[2025-11-26 06:44:20] 2025-11-26 11:43:40,745 | INFO     | . get job = 0 s
[2025-11-26 06:44:20] 2025-11-26 11:43:40,745 | INFO     | . initial setup = 2 s
[2025-11-26 06:44:20] 2025-11-26 11:43:40,745 | INFO     | . payload setup = 6 s
[2025-11-26 06:44:20] 2025-11-26 11:43:40,745 | INFO     | . stage-in = 0 s
[2025-11-26 06:44:20] 2025-11-26 11:43:40,745 | INFO     | . payload execution = 70309 s
[2025-11-26 06:44:20] 2025-11-26 11:43:40,745 | INFO     | . stage-out = 3 s
[2025-11-26 06:44:20] 2025-11-26 11:43:40,746 | INFO     | . log creation = 0 s
[2025-11-26 06:44:20] 2025-11-26 11:43:40,746 | INFO     | ..............................
[2025-11-26 06:44:20] 2025-11-26 11:43:40,820 | INFO     | time since job start (70343s) is within the limit (172800.0s)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,821 | INFO     | 
[2025-11-26 06:44:20] 2025-11-26 11:43:40,821 | INFO     | job summary report
[2025-11-26 06:44:20] 2025-11-26 11:43:40,821 | INFO     | --------------------------------------------------
[2025-11-26 06:44:20] 2025-11-26 11:43:40,821 | INFO     | PanDA job id: 6895401865
[2025-11-26 06:44:20] 2025-11-26 11:43:40,821 | INFO     | task id: 47556149
[2025-11-26 06:44:20] 2025-11-26 11:43:40,821 | INFO     | errors: (none)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | pilot state: finished 
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | transexitcode: 0
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | exeerrorcode: 0
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | exeerrordiag: 
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | exitcode: 0
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | exitmsg: OK
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | cpuconsumptiontime: 543018 s
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | nevents: 1000
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | neventsw: 0
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | pid: 14193
[2025-11-26 06:44:20] 2025-11-26 11:43:40,822 | INFO     | pgrp: 14193
[2025-11-26 06:44:20] 2025-11-26 11:43:40,823 | INFO     | corecount: 8
[2025-11-26 06:44:20] 2025-11-26 11:43:40,823 | INFO     | event service: False
[2025-11-26 06:44:20] 2025-11-26 11:43:40,823 | INFO     | sizes: {0: 2283436, 1: 2284292, 5: 2284554, 12: 2284610, 70319: 2341208, 70323: 2350386, 70328: 2350576}
[2025-11-26 06:44:20] 2025-11-26 11:43:40,823 | INFO     | --------------------------------------------------
[2025-11-26 06:44:20] 2025-11-26 11:43:40,823 | INFO     | 
[2025-11-26 06:44:20] 2025-11-26 11:43:40,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 06:44:20] 2025-11-26 11:43:40,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,837 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,837 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,838 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,838 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,838 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,838 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,838 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,839 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,840 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:44:20] 2025-11-26 11:43:40,840 | INFO     | job 6895401865 has completed (purged errors)
[2025-11-26 06:44:20] 2025-11-26 11:43:40,840 | INFO     | overall cleanup function is called
[2025-11-26 06:44:20] 2025-11-26 11:43:41,857 | INFO     | --- collectZombieJob: --- 10, [14193]
[2025-11-26 06:44:20] 2025-11-26 11:43:41,865 | INFO     | zombie collector waiting for pid 14193
[2025-11-26 06:44:20] 2025-11-26 11:43:41,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:44:20] 2025-11-26 11:43:41,865 | INFO     | collected zombie processes
[2025-11-26 06:44:20] 2025-11-26 11:43:41,866 | INFO     | will attempt to kill all subprocesses of pid=14193
[2025-11-26 06:44:20] 2025-11-26 11:43:42,109 | INFO     | PID=27265 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 06:44:20] 2025-11-26 11:43:42,109 | INFO     | .. there are 3 such processes running
[2025-11-26 06:44:20] 2025-11-26 11:43:42,124 | INFO     | process IDs to be killed: [14193] (in reverse order)
[2025-11-26 06:44:20] 2025-11-26 11:43:42,180 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:44:20] 2025-11-26 11:43:42,181 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:44:20] 2025-11-26 11:43:42,186 | INFO     | did not find any defunct processes belonging to 14193
[2025-11-26 06:44:20] 2025-11-26 11:43:42,191 | INFO     | did not find any defunct processes belonging to 14193
[2025-11-26 06:44:20] 2025-11-26 11:43:42,193 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:44:20] 2025-11-26 11:43:42,193 | INFO     | ready for new job
[2025-11-26 06:44:20] 2025-11-26 11:43:42,194 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:44:20] 2025-11-26 11:43:42,199 | INFO     | ***************************************
[2025-11-26 06:44:20] 2025-11-26 11:43:42,199 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:44:20] 2025-11-26 11:43:42,199 | INFO     | ***************************************
[2025-11-26 06:44:20] 2025-11-26 11:43:42,199 | INFO     | 
[2025-11-26 06:44:20] 2025-11-26 11:43:42,200 | INFO     | architecture information:
[2025-11-26 06:44:20] 2025-11-26 11:43:42,201 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:44:20] 2025-11-26 11:43:42,213 | INFO     | cat /etc/os-release:
[2025-11-26 06:44:20] NAME="CentOS Linux"
[2025-11-26 06:44:20] VERSION="7 (Core)"
[2025-11-26 06:44:20] ID="centos"
[2025-11-26 06:44:20] ID_LIKE="rhel fedora"
[2025-11-26 06:44:20] VERSION_ID="7"
[2025-11-26 06:44:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:44:20] ANSI_COLOR="0;31"
[2025-11-26 06:44:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:44:20] HOME_URL="https://www.centos.org/"
[2025-11-26 06:44:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:44:20] 
[2025-11-26 06:44:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:44:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:44:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:44:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:44:20] 
[2025-11-26 06:44:20] 2025-11-26 11:43:42,213 | INFO     | ***************************************
[2025-11-26 06:44:20] 2025-11-26 11:43:42,716 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 06:44:20] 2025-11-26 11:43:42,727 | INFO     | sufficient remaining disk space (25750929408 B)
[2025-11-26 06:44:20] 2025-11-26 11:43:42,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:44:20] 2025-11-26 11:43:42,728 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:44:20] 2025-11-26 11:43:42,728 | INFO     | update_server=False
[2025-11-26 06:44:20] 2025-11-26 11:43:42,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:44:20] 2025-11-26 11:43:42,728 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:44:20] 2025-11-26 11:43:42,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:44:20] 2025-11-26 11:43:42,728 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 06:44:20] 2025-11-26 11:43:42,729 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:44:20] 2025-11-26 11:43:42,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:44:20] 2025-11-26 11:43:42,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:44:20] 2025-11-26 11:43:42,822 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 06:44:20] 2025-11-26 11:43:42,822 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 06:44:20] 2025-11-26 11:43:42,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:44:20] 2025-11-26 11:43:42,823 | INFO     | will abort loop
[2025-11-26 06:44:20] 2025-11-26 11:43:43,073 | INFO     | all data control threads have been joined
[2025-11-26 06:44:20] 2025-11-26 11:43:43,232 | INFO     | all payload control threads have been joined
[2025-11-26 06:44:20] 2025-11-26 11:43:43,733 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:43,734 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:43,735 | INFO     | all job control threads have been joined
[2025-11-26 06:44:20] 2025-11-26 11:43:43,738 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:43,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:44:20] 2025-11-26 11:43:43,828 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:44,078 | INFO     | [data] control thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:44,192 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:44,237 | INFO     | [payload] control thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:44,263 | INFO     | [job] validate thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:44,269 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:44,333 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:44,521 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:44,740 | INFO     | [job] control thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:45,046 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:45,098 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:45,753 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:43:46,734 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:44:20] 2025-11-26 11:44:13,577 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:44:20] 2025-11-26 11:44:15,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123409286976)>', '<ExcThread(monitor, started 140122687264512)>']
[2025-11-26 06:44:20] 2025-11-26 11:44:15,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:44:20] 2025-11-26 11:44:15,892 | INFO     | [monitor] control thread has ended
[2025-11-26 06:44:20] 2025-11-26 11:44:20,091 | INFO     | all workflow threads have been joined
[2025-11-26 06:44:20] 2025-11-26 11:44:20,091 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:44:20] 2025-11-26 11:44:20,092 | INFO     | traces error code: 0
[2025-11-26 06:44:20] 2025-11-26 11:44:20,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:44:20] 2025-11-26 11:44:20,221 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:44:20] 2025-11-26 11:44:20,223 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:44:20] 2025-11-26 11:44:20,225 [wrapper] pilotpid: 27265
[2025-11-26 06:44:20] 2025-11-26 11:44:20,227 [wrapper] Pilot exit status: 0
[2025-11-26 06:44:20] 2025-11-26 11:44:20,236 [wrapper] pandaids: 6895401865 6895401865 6895401865
[2025-11-26 06:44:20] 2025-11-26 11:44:20,262 [wrapper] cleanup supervisor_pilot  2819 27266
[2025-11-26 06:44:20] 2025-11-26 11:44:20,264 [wrapper] Test setup, not cleaning
[2025-11-26 06:44:20] 2025-11-26 11:44:20,266 [wrapper] apfmon messages muted
[2025-11-26 06:44:20] 2025-11-26 11:44:20,268 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:44:20] 2025-11-26 11:44:20,270 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:44:20]  *** Error codes and diagnostics ***
[2025-11-26 06:44:20]     "exeErrorCode": 0,
[2025-11-26 06:44:20]     "exeErrorDiag": "",
[2025-11-26 06:44:20]     "pilotErrorCode": 0,
[2025-11-26 06:44:20]     "pilotErrorDiag": "",
[2025-11-26 06:44:20]  *** Listing of results directory ***
[2025-11-26 06:44:20] total 1727112
[2025-11-26 06:44:20] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 02:53 pilot3.tar.gz
[2025-11-26 06:44:20] -rwx------ 1 boincer umatlas     36292 Nov 24 02:58 runpilot2-wrapper.sh
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 02:58 queuedata.json
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas       100 Nov 25 01:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:44:20] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 01:05 run_atlas
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas       105 Nov 25 01:05 job.xml
[2025-11-26 06:44:20] -rw-r--r-- 3 boincer umatlas 411431891 Nov 25 01:05 EVNT.47483658._001266.pool.root.1
[2025-11-26 06:44:20] -rw-r--r-- 3 boincer umatlas 411431891 Nov 25 01:05 ATLAS.root_0
[2025-11-26 06:44:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:05 start_atlas.sh
[2025-11-26 06:44:20] drwxrwx--x 2 boincer umatlas      4096 Nov 25 01:05 shared
[2025-11-26 06:44:20] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 01:05 input.tar.gz
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas         0 Nov 25 01:05 boinc_lockfile
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas      2785 Nov 25 11:11 pandaJob.out
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas        57 Nov 25 11:11 setup.sh.local
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas    991909 Nov 25 11:11 agis_schedconf.cvmfs.json
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas       534 Nov 26 06:32 boinc_task_state.xml
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 06:38 init_data.xml
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas 917609104 Nov 26 06:42 HITS.47556149._002526.pool.root.1
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas        96 Nov 26 06:43 pilot_heartbeat.json
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas      1064 Nov 26 06:43 memory_monitor_summary.json
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas   1516240 Nov 26 06:43 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas   2316096 Nov 26 06:43 log.47556149._002526.job.log.tgz.1
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas      8649 Nov 26 06:43 heartbeat.json
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 06:44 boinc_mmap_file
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas        30 Nov 26 06:44 wrapper_checkpoint.txt
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas      4738 Nov 26 06:44 pilotlog.txt
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas   9762749 Nov 26 06:44 log.47556149._002526.job.log.1
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas       353 Nov 26 06:44 output.list
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas       620 Nov 26 06:44 runtime_log
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas  12093440 Nov 26 06:44 result.tar.gz
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas      9428 Nov 26 06:44 runtime_log.err
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas       918 Nov 26 06:44 5zpKDmqdgh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyWLKDmNAFXnm.diag
[2025-11-26 06:44:20] -rw-r--r-- 1 boincer umatlas     25617 Nov 26 06:44 stderr.txt
[2025-11-26 06:44:20] HITS file was successfully produced:
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas 917609104 Nov 26 06:42 shared/HITS.pool.root.1
[2025-11-26 06:44:20]  *** Contents of shared directory: ***
[2025-11-26 06:44:20] total 1310312
[2025-11-26 06:44:20] -rw-r--r-- 3 boincer umatlas 411431891 Nov 25 01:05 ATLAS.root_0
[2025-11-26 06:44:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:05 start_atlas.sh
[2025-11-26 06:44:20] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 01:05 input.tar.gz
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas 917609104 Nov 26 06:42 HITS.pool.root.1
[2025-11-26 06:44:20] -rw------- 1 boincer umatlas  12093440 Nov 26 06:44 result.tar.gz
06:44:21 (16011): run_atlas exited; CPU time 541928.050484
06:44:21 (16011): called boinc_finish(0)

</stderr_txt>
]]>

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