Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:00:08 (17345): wrapper (7.7.26015): starting
01:00:08 (17345): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:00:08] Arguments: --nthreads 8
[2025-11-25 01:00:08] Threads: 8
[2025-11-25 01:00:08] Checking for CVMFS
[2025-11-25 01:00:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:00:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:00:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:00:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:00:08] 2.11.2.0 28294 115869 139952 153272 3 82 12029902 18432000 1035 130560 0 82268143 99.973 4887199 29870 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 01:00:08] CVMFS is ok
[2025-11-25 01:00:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 01:00:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 01:00:08] Further information can be found at the LHC@home message board.
[2025-11-25 01:00:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:00:08] Checking for apptainer binary...
[2025-11-25 01:00:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:00:08] Running /usr/bin/apptainer --version
[2025-11-25 01:00:08] apptainer version 1.3.2-1.el7
[2025-11-25 01:00:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:00:09] c-206-25.aglt2.org
[2025-11-25 01:00:09] apptainer works
[2025-11-25 01:00:09] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:00:09] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:00:09] Starting ATLAS job with PandaID=6895401845
[2025-11-25 01:00:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:10:19]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:10:19] 2025-11-26 01:09:17,216 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:10:19] 2025-11-26 01:09:17,217 | INFO     | sum of square deviations: 447417070275.02277
[2025-11-25 20:10:19] 2025-11-26 01:09:17,240 | INFO     | sum of deviations: 2038149588951.1355
[2025-11-25 20:10:19] 2025-11-26 01:09:17,240 | INFO     | mean x: 1764084878.0513275
[2025-11-25 20:10:19] 2025-11-26 01:09:17,240 | INFO     | mean y: 2862443.738938053
[2025-11-25 20:10:19] 2025-11-26 01:09:17,240 | INFO     | intersect: -8033194085.944046
[2025-11-25 20:10:19] 2025-11-26 01:09:17,241 | INFO     | chi2: 6.412211260162785
[2025-11-25 20:10:19] 2025-11-26 01:09:17,242 | INFO     | sum of square deviations: 441504321515.99634
[2025-11-25 20:10:19] 2025-11-26 01:09:17,277 | INFO     | sum of deviations: 2395578187948.276
[2025-11-25 20:10:19] 2025-11-26 01:09:17,278 | INFO     | mean x: 1764084725.5537777
[2025-11-25 20:10:19] 2025-11-26 01:09:17,278 | INFO     | mean y: 2871657.5822222224
[2025-11-25 20:10:19] 2025-11-26 01:09:17,278 | INFO     | intersect: -9568955127.07641
[2025-11-25 20:10:19] 2025-11-26 01:09:17,280 | INFO     | chi2: 3.4514316308264235
[2025-11-25 20:10:19] 2025-11-26 01:09:17,280 | INFO     | current chi2=3.4514316308264235 (change=46.17408112753286 %)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,281 | INFO     | sum of square deviations: 435643899319.45575
[2025-11-25 20:10:19] 2025-11-26 01:09:17,322 | INFO     | sum of deviations: 2590331249044.344
[2025-11-25 20:10:19] 2025-11-26 01:09:17,322 | INFO     | mean x: 1764084573.05625
[2025-11-25 20:10:19] 2025-11-26 01:09:17,322 | INFO     | mean y: 2876725.407142857
[2025-11-25 20:10:19] 2025-11-26 01:09:17,323 | INFO     | intersect: -10486340276.559443
[2025-11-25 20:10:19] 2025-11-26 01:09:17,324 | INFO     | chi2: 2.4982616744223374
[2025-11-25 20:10:19] 2025-11-26 01:09:17,324 | INFO     | current chi2=2.4982616744223374 (change=27.61665472063416 %)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,326 | INFO     | sum of square deviations: 429835571122.9038
[2025-11-25 20:10:19] 2025-11-26 01:09:17,362 | INFO     | sum of deviations: 2684899868118.6143
[2025-11-25 20:10:19] 2025-11-26 01:09:17,362 | INFO     | mean x: 1764084420.5587444
[2025-11-25 20:10:19] 2025-11-26 01:09:17,362 | INFO     | mean y: 2879203.326457399
[2025-11-25 20:10:19] 2025-11-26 01:09:17,363 | INFO     | intersect: -11016194941.083961
[2025-11-25 20:10:19] 2025-11-26 01:09:17,364 | INFO     | chi2: 2.0848977595587077
[2025-11-25 20:10:19] 2025-11-26 01:09:17,364 | INFO     | current chi2=2.0848977595587077 (change=16.546061571360816 %)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,364 | INFO     | right removable region: 1114
[2025-11-25 20:10:19] 2025-11-26 01:09:17,365 | INFO     | sum of square deviations: 441503941485.99567
[2025-11-25 20:10:19] 2025-11-26 01:09:17,392 | INFO     | sum of deviations: 1783714457530.2532
[2025-11-25 20:10:19] 2025-11-26 01:09:17,392 | INFO     | mean x: 1764085030.5537777
[2025-11-25 20:10:19] 2025-11-26 01:09:17,392 | INFO     | mean y: 2868996.0702222222
[2025-11-25 20:10:19] 2025-11-26 01:09:17,392 | INFO     | intersect: -7124188494.562128
[2025-11-25 20:10:19] 2025-11-26 01:09:17,393 | INFO     | chi2: 4.6935146173756745
[2025-11-25 20:10:19] 2025-11-26 01:09:17,393 | INFO     | current chi2=4.6935146173756745 (change=26.803493725555732 %)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,394 | INFO     | sum of square deviations: 435643276143.6773
[2025-11-25 20:10:19] 2025-11-26 01:09:17,417 | INFO     | sum of deviations: 1705872944459.1423
[2025-11-25 20:10:19] 2025-11-26 01:09:17,417 | INFO     | mean x: 1764085183.0544643
[2025-11-25 20:10:19] 2025-11-26 01:09:17,417 | INFO     | mean y: 2871021.161607143
[2025-11-25 20:10:19] 2025-11-26 01:09:17,417 | INFO     | intersect: -6904856815.54987
[2025-11-25 20:10:19] 2025-11-26 01:09:17,418 | INFO     | chi2: 4.633770805964719
[2025-11-25 20:10:19] 2025-11-26 01:09:17,418 | INFO     | current chi2=4.633770805964719 (change=1.2729013603106767 %)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,419 | INFO     | left removable region: 20
[2025-11-25 20:10:19] 2025-11-26 01:09:17,419 | INFO     | sum of square deviations: 406003365858.01825
[2025-11-25 20:10:19] 2025-11-26 01:09:17,445 | INFO     | sum of deviations: 2219826781220.338
[2025-11-25 20:10:19] 2025-11-26 01:09:17,445 | INFO     | mean x: 1764085000.060329
[2025-11-25 20:10:19] 2025-11-26 01:09:17,445 | INFO     | mean y: 2891382.904021938
[2025-11-25 20:10:19] 2025-11-26 01:09:17,445 | INFO     | intersect: -9642258034.040552
[2025-11-25 20:10:19] 2025-11-26 01:09:17,447 | INFO     | chi2: 0.24809905282259065
[2025-11-25 20:10:19] 2025-11-26 01:09:17,447 | INFO     | current memory leak: 5.47 B/s (using 1094 data points, chi2=0.25)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,448 | INFO     | could have reported an average CPU frequency of 2607 MHz (41 samples)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,448 | INFO     | ..............................
[2025-11-25 20:10:19] 2025-11-26 01:09:17,449 | INFO     | . Timing measurements:
[2025-11-25 20:10:19] 2025-11-26 01:09:17,449 | INFO     | . get job = 0 s
[2025-11-25 20:10:19] 2025-11-26 01:09:17,449 | INFO     | . initial setup = 2 s
[2025-11-25 20:10:19] 2025-11-26 01:09:17,449 | INFO     | . payload setup = 4 s
[2025-11-25 20:10:19] 2025-11-26 01:09:17,449 | INFO     | . stage-in = 0 s
[2025-11-25 20:10:19] 2025-11-26 01:09:17,449 | INFO     | . payload execution = 68904 s
[2025-11-25 20:10:19] 2025-11-26 01:09:17,450 | INFO     | . stage-out = 3 s
[2025-11-25 20:10:19] 2025-11-26 01:09:17,450 | INFO     | . log creation = 0 s
[2025-11-25 20:10:19] 2025-11-26 01:09:17,450 | INFO     | ..............................
[2025-11-25 20:10:19] 2025-11-26 01:09:17,580 | INFO     | 
[2025-11-25 20:10:19] 2025-11-26 01:09:17,580 | INFO     | job summary report
[2025-11-25 20:10:19] 2025-11-26 01:09:17,580 | INFO     | --------------------------------------------------
[2025-11-25 20:10:19] 2025-11-26 01:09:17,580 | INFO     | PanDA job id: 6895401845
[2025-11-25 20:10:19] 2025-11-26 01:09:17,580 | INFO     | task id: 47556149
[2025-11-25 20:10:19] 2025-11-26 01:09:17,581 | INFO     | errors: (none)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,581 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:10:19] 2025-11-26 01:09:17,581 | INFO     | pilot state: finished 
[2025-11-25 20:10:19] 2025-11-26 01:09:17,581 | INFO     | transexitcode: 0
[2025-11-25 20:10:19] 2025-11-26 01:09:17,581 | INFO     | exeerrorcode: 0
[2025-11-25 20:10:19] 2025-11-26 01:09:17,581 | INFO     | exeerrordiag: 
[2025-11-25 20:10:19] 2025-11-26 01:09:17,581 | INFO     | exitcode: 0
[2025-11-25 20:10:19] 2025-11-26 01:09:17,582 | INFO     | exitmsg: OK
[2025-11-25 20:10:19] 2025-11-26 01:09:17,582 | INFO     | cpuconsumptiontime: 537977 s
[2025-11-25 20:10:19] 2025-11-26 01:09:17,582 | INFO     | nevents: 1000
[2025-11-25 20:10:19] 2025-11-26 01:09:17,582 | INFO     | neventsw: 0
[2025-11-25 20:10:19] 2025-11-26 01:09:17,582 | INFO     | pid: 27493
[2025-11-25 20:10:19] 2025-11-26 01:09:17,582 | INFO     | pgrp: 27493
[2025-11-25 20:10:19] 2025-11-26 01:09:17,583 | INFO     | corecount: 8
[2025-11-25 20:10:19] 2025-11-26 01:09:17,583 | INFO     | event service: False
[2025-11-25 20:10:19] 2025-11-26 01:09:17,583 | INFO     | sizes: {0: 2284196, 1: 2284338, 4: 2284600, 11: 2284628, 68913: 2340719, 68914: 2340718, 68918: 2349957, 68924: 2350243}
[2025-11-25 20:10:19] 2025-11-26 01:09:17,583 | INFO     | --------------------------------------------------
[2025-11-25 20:10:19] 2025-11-26 01:09:17,583 | INFO     | 
[2025-11-25 20:10:19] 2025-11-26 01:09:17,583 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 20:10:19] 2025-11-26 01:09:17,603 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,603 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,604 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,604 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,605 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,605 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,605 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,605 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,605 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,606 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:10:19] 2025-11-26 01:09:17,607 | INFO     | job 6895401845 has completed (purged errors)
[2025-11-25 20:10:19] 2025-11-26 01:09:17,607 | INFO     | overall cleanup function is called
[2025-11-25 20:10:19] 2025-11-26 01:09:18,623 | INFO     | --- collectZombieJob: --- 10, [27493]
[2025-11-25 20:10:19] 2025-11-26 01:09:18,623 | INFO     | zombie collector waiting for pid 27493
[2025-11-25 20:10:19] 2025-11-26 01:09:18,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:10:19] 2025-11-26 01:09:18,624 | INFO     | collected zombie processes
[2025-11-25 20:10:19] 2025-11-26 01:09:18,624 | INFO     | will attempt to kill all subprocesses of pid=27493
[2025-11-25 20:10:19] 2025-11-26 01:09:18,797 | INFO     | process IDs to be killed: [27493] (in reverse order)
[2025-11-25 20:10:19] 2025-11-26 01:09:18,866 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:10:19] 2025-11-26 01:09:18,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:10:19] 2025-11-26 01:09:18,872 | INFO     | did not find any defunct processes belonging to 27493
[2025-11-25 20:10:19] 2025-11-26 01:09:18,877 | INFO     | did not find any defunct processes belonging to 27493
[2025-11-25 20:10:19] 2025-11-26 01:09:18,879 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:10:19] 2025-11-26 01:09:18,879 | INFO     | ready for new job
[2025-11-25 20:10:19] 2025-11-26 01:09:18,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:10:19] 2025-11-26 01:09:18,884 | INFO     | ***************************************
[2025-11-25 20:10:19] 2025-11-26 01:09:18,884 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:10:19] 2025-11-26 01:09:18,885 | INFO     | ***************************************
[2025-11-25 20:10:19] 2025-11-26 01:09:18,885 | INFO     | 
[2025-11-25 20:10:19] 2025-11-26 01:09:18,886 | INFO     | architecture information:
[2025-11-25 20:10:19] 2025-11-26 01:09:18,886 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:10:19] 2025-11-26 01:09:18,901 | INFO     | cat /etc/os-release:
[2025-11-25 20:10:19] NAME="CentOS Linux"
[2025-11-25 20:10:19] VERSION="7 (Core)"
[2025-11-25 20:10:19] ID="centos"
[2025-11-25 20:10:19] ID_LIKE="rhel fedora"
[2025-11-25 20:10:19] VERSION_ID="7"
[2025-11-25 20:10:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:10:19] ANSI_COLOR="0;31"
[2025-11-25 20:10:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:10:19] HOME_URL="https://www.centos.org/"
[2025-11-25 20:10:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:10:19] 
[2025-11-25 20:10:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:10:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:10:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:10:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:10:19] 
[2025-11-25 20:10:19] 2025-11-26 01:09:18,901 | INFO     | ***************************************
[2025-11-25 20:10:19] 2025-11-26 01:09:19,404 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 20:10:19] 2025-11-26 01:09:19,417 | INFO     | sufficient remaining disk space (25745686528 B)
[2025-11-25 20:10:19] 2025-11-26 01:09:19,417 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:10:19] 2025-11-26 01:09:19,417 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:10:19] 2025-11-26 01:09:19,418 | INFO     | update_server=False
[2025-11-25 20:10:19] 2025-11-26 01:09:19,418 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:10:19] 2025-11-26 01:09:19,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:10:19] 2025-11-26 01:09:19,626 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 20:10:19] 2025-11-26 01:09:19,626 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 20:10:19] 2025-11-26 01:09:19,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:10:19] 2025-11-26 01:09:19,627 | INFO     | will abort loop
[2025-11-25 20:10:19] 2025-11-26 01:09:19,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:10:19] 2025-11-26 01:09:20,134 | INFO     | all payload control threads have been joined
[2025-11-25 20:10:19] 2025-11-26 01:09:20,244 | INFO     | all data control threads have been joined
[2025-11-25 20:10:19] 2025-11-26 01:09:20,423 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:20,424 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:20,449 | INFO     | all job control threads have been joined
[2025-11-25 20:10:19] 2025-11-26 01:09:20,632 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:20,693 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,052 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,083 | INFO     | [job] validate thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,139 | INFO     | [payload] control thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,252 | INFO     | [data] control thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,454 | INFO     | [job] control thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,462 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,470 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,489 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,599 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,690 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:21,765 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:22,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:10:19] 2025-11-26 01:09:26,516 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:10:19] 2025-11-26 01:09:50,282 | INFO     | PID=21085 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 20:10:19] 2025-11-26 01:09:50,282 | INFO     | .. there are 3 such processes running
[2025-11-25 20:10:19] 2025-11-26 01:09:50,282 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:10:19] 2025-11-26 01:09:50,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:10:19] 2025-11-26 01:09:50,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:10:19] 2025-11-26 01:10:13,460 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:10:19] 2025-11-26 01:10:14,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711117104960)>', '<ExcThread(monitor, started 140710669952768)>']
[2025-11-25 20:10:19] 2025-11-26 01:10:15,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:10:19] 2025-11-26 01:10:15,412 | INFO     | [monitor] control thread has ended
[2025-11-25 20:10:19] 2025-11-26 01:10:19,661 | INFO     | all workflow threads have been joined
[2025-11-25 20:10:19] 2025-11-26 01:10:19,661 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:10:19] 2025-11-26 01:10:19,661 | INFO     | traces error code: 0
[2025-11-25 20:10:19] 2025-11-26 01:10:19,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:10:19] 2025-11-26 01:10:19,763 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:10:19] 2025-11-26 01:10:19,769 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:10:19] 2025-11-26 01:10:19,771 [wrapper] pilotpid: 21085
[2025-11-25 20:10:19] 2025-11-26 01:10:19,773 [wrapper] Pilot exit status: 0
[2025-11-25 20:10:19] 2025-11-26 01:10:19,781 [wrapper] pandaids: 6895401845
[2025-11-25 20:10:19] 2025-11-26 01:10:19,811 [wrapper] cleanup supervisor_pilot 25548 21086
[2025-11-25 20:10:19] 2025-11-26 01:10:19,813 [wrapper] Test setup, not cleaning
[2025-11-25 20:10:19] 2025-11-26 01:10:19,815 [wrapper] apfmon messages muted
[2025-11-25 20:10:19] 2025-11-26 01:10:19,817 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:10:19] 2025-11-26 01:10:19,819 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:10:19]  *** Error codes and diagnostics ***
[2025-11-25 20:10:19]     "exeErrorCode": 0,
[2025-11-25 20:10:19]     "exeErrorDiag": "",
[2025-11-25 20:10:19]     "pilotErrorCode": 0,
[2025-11-25 20:10:19]     "pilotErrorDiag": "",
[2025-11-25 20:10:19]  *** Listing of results directory ***
[2025-11-25 20:10:19] total 1327852
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 02:32 pilot3.tar.gz
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 02:49 queuedata.json
[2025-11-25 20:10:19] -rwx------ 1 boincer umatlas     36292 Nov 24 02:50 runpilot2-wrapper.sh
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas       100 Nov 25 01:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:10:19] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 01:00 run_atlas
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas       105 Nov 25 01:00 job.xml
[2025-11-25 20:10:19] -rw-r--r-- 2 boincer umatlas 412228251 Nov 25 01:00 EVNT.47483658._001264.pool.root.1
[2025-11-25 20:10:19] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:00 start_atlas.sh
[2025-11-25 20:10:19] drwxrwx--x 2 boincer umatlas      4096 Nov 25 01:00 shared
[2025-11-25 20:10:19] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 01:00 input.tar.gz
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas         0 Nov 25 01:00 boinc_lockfile
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 01:00 pandaJob.out
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas        57 Nov 25 01:00 setup.sh.local
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas    991801 Nov 25 01:00 agis_schedconf.cvmfs.json
[2025-11-25 20:10:19] drwx------ 5 boincer umatlas      4096 Nov 25 01:00 pilot3
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas       533 Nov 25 19:53 boinc_task_state.xml
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas      5953 Nov 25 20:01 init_data.xml
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas 919911616 Nov 25 20:08 HITS.47556149._002506.pool.root.1
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas        95 Nov 25 20:08 pilot_heartbeat.json
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas      1067 Nov 25 20:09 memory_monitor_summary.json
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas   1516240 Nov 25 20:09 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas   2293437 Nov 25 20:09 log.47556149._002506.job.log.tgz.1
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas      8659 Nov 25 20:09 heartbeat.json
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas        29 Nov 25 20:10 wrapper_checkpoint.txt
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 20:10 boinc_mmap_file
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas      5007 Nov 25 20:10 pilotlog.txt
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas   9538665 Nov 25 20:10 log.47556149._002506.job.log.1
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas       353 Nov 25 20:10 output.list
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas       620 Nov 25 20:10 runtime_log
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas  11847680 Nov 25 20:10 result.tar.gz
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 20:10 runtime_log.err
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas       668 Nov 25 20:10 neLLDmXWgh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmWLKDmUhpNPm.diag
[2025-11-25 20:10:19] -rw-r--r-- 1 boincer umatlas     21127 Nov 25 20:10 stderr.txt
[2025-11-25 20:10:19] HITS file was successfully produced:
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas 919911616 Nov 25 20:08 shared/HITS.pool.root.1
[2025-11-25 20:10:19]  *** Contents of shared directory: ***
[2025-11-25 20:10:19] total 1313096
[2025-11-25 20:10:19] -rw-r--r-- 2 boincer umatlas 412228251 Nov 25 01:00 ATLAS.root_0
[2025-11-25 20:10:19] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:00 start_atlas.sh
[2025-11-25 20:10:19] -rw-r--r-- 2 boincer umatlas    590105 Nov 25 01:00 input.tar.gz
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas 919911616 Nov 25 20:08 HITS.pool.root.1
[2025-11-25 20:10:19] -rw------- 1 boincer umatlas  11847680 Nov 25 20:10 result.tar.gz
20:10:20 (17345): run_atlas exited; CPU time 537630.488992
20:10:20 (17345): called boinc_finish(0)

</stderr_txt>
]]>

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