Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:01:24 (28098): wrapper (7.7.26015): starting
01:01:24 (28098): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:01:24] Arguments: --nthreads 8
[2025-11-25 01:01:24] Threads: 8
[2025-11-25 01:01:24] Checking for CVMFS
[2025-11-25 01:01:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:01:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:01:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:01:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:01:24] 2.11.2.0 6956 115830 141720 153272 0 82 12848934 18432000 1539 130560 0 84568815 99.973 4947386 30956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 01:01:24] CVMFS is ok
[2025-11-25 01:01:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 01:01:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 01:01:25] Further information can be found at the LHC@home message board.
[2025-11-25 01:01:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:01:25] Checking for apptainer binary...
[2025-11-25 01:01:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:01:25] Running /usr/bin/apptainer --version
[2025-11-25 01:01:25] apptainer version 1.3.2-1.el7
[2025-11-25 01:01:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:01:25] c-206-16.aglt2.org
[2025-11-25 01:01:25] apptainer works
[2025-11-25 01:01:25] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:01:25] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:01:25] Starting ATLAS job with PandaID=6895366948
[2025-11-25 01:01:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:46:54 (1329): wrapper (7.7.26015): starting
04:46:54 (1329): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 04:46:54] Arguments: --nthreads 8
[2025-11-25 04:46:54] Threads: 8
[2025-11-25 04:46:54] This job has been restarted, cleaning up previous attempt
[2025-11-25 04:46:54] Checking for CVMFS
[2025-11-25 04:46:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 04:46:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 04:46:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 04:46:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 04:46:54] 2.11.2.0 6956 116055 137548 153277 3 57 12865257 18432001 1 130560 0 84934760 99.973 4953996 30960 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 04:46:54] CVMFS is ok
[2025-11-25 04:46:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 04:46:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 04:46:54] Further information can be found at the LHC@home message board.
[2025-11-25 04:46:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 04:46:54] Checking for apptainer binary...
[2025-11-25 04:46:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 04:46:54] Running /usr/bin/apptainer --version
[2025-11-25 04:46:54] apptainer version 1.3.2-1.el7
[2025-11-25 04:46:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 04:46:56] c-206-16.aglt2.org
[2025-11-25 04:46:56] apptainer works
[2025-11-25 04:46:56] Set ATHENA_PROC_NUMBER=8
[2025-11-25 04:46:56] Set ATHENA_CORE_NUMBER=8
[2025-11-25 04:46:56] Starting ATLAS job with PandaID=6895366948
[2025-11-25 04:46:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:11:02 (16010): wrapper (7.7.26015): starting
11:11:02 (16010): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 11:11:02] Arguments: --nthreads 8
[2025-11-25 11:11:02] Threads: 8
[2025-11-25 11:11:02] This job has been restarted, cleaning up previous attempt
[2025-11-25 11:11:02] Checking for CVMFS
[2025-11-25 11:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 11:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 11:11:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 11:11:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 11:11:03] 2.11.2.0 6956 116439 133116 153287 3 57 12934195 18432000 1 130560 0 85385686 99.973 4968516 30969 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 11:11:03] CVMFS is ok
[2025-11-25 11:11:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 11:11:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 11:11:03] Further information can be found at the LHC@home message board.
[2025-11-25 11:11:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 11:11:03] Checking for apptainer binary...
[2025-11-25 11:11:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 11:11:03] Running /usr/bin/apptainer --version
[2025-11-25 11:11:03] apptainer version 1.3.2-1.el7
[2025-11-25 11:11:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 11:11:04] c-206-16.aglt2.org
[2025-11-25 11:11:04] apptainer works
[2025-11-25 11:11:04] Set ATHENA_PROC_NUMBER=8
[2025-11-25 11:11:04] Set ATHENA_CORE_NUMBER=8
[2025-11-25 11:11:04] Starting ATLAS job with PandaID=6895366948
[2025-11-25 11:11:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 06:52:39]  *** The last 200 lines of the pilot log: ***
[2025-11-26 06:52:39] 2025-11-26 11:52:06,825 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2128.4583333333335
[2025-11-26 06:52:39] 2025-11-26 11:52:06,827 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895366948/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 06:52:39] 2025-11-26 11:52:06,828 | INFO     | extracted standard info from prmon json
[2025-11-26 06:52:39] 2025-11-26 11:52:06,828 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 06:52:39] 2025-11-26 11:52:06,828 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 06:52:39] 2025-11-26 11:52:06,844 | INFO     | fitting pss+swap vs Time
[2025-11-26 06:52:39] 2025-11-26 11:52:06,846 | INFO     | sum of square deviations: 485258991152.97406
[2025-11-26 06:52:39] 2025-11-26 11:52:06,872 | INFO     | sum of deviations: 2489380519270.352
[2025-11-26 06:52:39] 2025-11-26 11:52:06,872 | INFO     | mean x: 1764122484.7924204
[2025-11-26 06:52:39] 2025-11-26 11:52:06,872 | INFO     | mean y: 2922345.2670111973
[2025-11-26 06:52:39] 2025-11-26 11:52:06,872 | INFO     | intersect: -9047032889.595707
[2025-11-26 06:52:39] 2025-11-26 11:52:06,874 | INFO     | chi2: 4.944316833409251
[2025-11-26 06:52:39] 2025-11-26 11:52:06,875 | INFO     | sum of square deviations: 479016717494.8199
[2025-11-26 06:52:39] 2025-11-26 11:52:06,900 | INFO     | sum of deviations: 2803654401548.627
[2025-11-26 06:52:39] 2025-11-26 11:52:06,900 | INFO     | mean x: 1764122332.2958477
[2025-11-26 06:52:39] 2025-11-26 11:52:06,900 | INFO     | mean y: 2930018.5683391006
[2025-11-26 06:52:39] 2025-11-26 11:52:06,900 | INFO     | intersect: -10322365866.047565
[2025-11-26 06:52:39] 2025-11-26 11:52:06,901 | INFO     | chi2: 2.7998476399253502
[2025-11-26 06:52:39] 2025-11-26 11:52:06,902 | INFO     | current chi2=2.7998476399253502 (change=43.372406456509914 %)
[2025-11-26 06:52:39] 2025-11-26 11:52:06,903 | INFO     | sum of square deviations: 472828212286.64044
[2025-11-26 06:52:39] 2025-11-26 11:52:06,928 | INFO     | sum of deviations: 2905170593102.8843
[2025-11-26 06:52:39] 2025-11-26 11:52:06,928 | INFO     | mean x: 1764122179.799305
[2025-11-26 06:52:39] 2025-11-26 11:52:06,929 | INFO     | mean y: 2932515.852302346
[2025-11-26 06:52:39] 2025-11-26 11:52:06,929 | INFO     | intersect: -10836259702.835674
[2025-11-26 06:52:39] 2025-11-26 11:52:06,930 | INFO     | chi2: 2.4040524533622323
[2025-11-26 06:52:39] 2025-11-26 11:52:06,930 | INFO     | current chi2=2.4040524533622323 (change=14.136311594929168 %)
[2025-11-26 06:52:39] 2025-11-26 11:52:06,930 | INFO     | right removable region: 1150
[2025-11-26 06:52:39] 2025-11-26 11:52:06,931 | INFO     | sum of square deviations: 479016226872.4112
[2025-11-26 06:52:39] 2025-11-26 11:52:06,959 | INFO     | sum of deviations: 2196326834348.0876
[2025-11-26 06:52:39] 2025-11-26 11:52:06,959 | INFO     | mean x: 1764122637.2949827
[2025-11-26 06:52:39] 2025-11-26 11:52:06,960 | INFO     | mean y: 2929494.911764706
[2025-11-26 06:52:39] 2025-11-26 11:52:06,960 | INFO     | intersect: -8085710659.660511
[2025-11-26 06:52:39] 2025-11-26 11:52:06,962 | INFO     | chi2: 2.9648380475794744
[2025-11-26 06:52:39] 2025-11-26 11:52:06,962 | INFO     | current chi2=2.9648380475794744 (change=40.03543568353543 %)
[2025-11-26 06:52:39] 2025-11-26 11:52:06,964 | INFO     | sum of square deviations: 472827513352.2006
[2025-11-26 06:52:39] 2025-11-26 11:52:06,992 | INFO     | sum of deviations: 2095288249395.4214
[2025-11-26 06:52:39] 2025-11-26 11:52:06,992 | INFO     | mean x: 1764122789.7940922
[2025-11-26 06:52:39] 2025-11-26 11:52:06,992 | INFO     | mean y: 2931984.297132928
[2025-11-26 06:52:39] 2025-11-26 11:52:06,993 | INFO     | intersect: -7814603263.895773
[2025-11-26 06:52:39] 2025-11-26 11:52:06,994 | INFO     | chi2: 2.8589442904214017
[2025-11-26 06:52:39] 2025-11-26 11:52:06,994 | INFO     | current chi2=2.8589442904214017 (change=3.5716540147791713 %)
[2025-11-26 06:52:39] 2025-11-26 11:52:06,994 | INFO     | left removable region: 20
[2025-11-26 06:52:39] 2025-11-26 11:52:06,995 | INFO     | sum of square deviations: 447417197517.6989
[2025-11-26 06:52:39] 2025-11-26 11:52:07,020 | INFO     | sum of deviations: 2362731891056.635
[2025-11-26 06:52:39] 2025-11-26 11:52:07,020 | INFO     | mean x: 1764122759.300885
[2025-11-26 06:52:39] 2025-11-26 11:52:07,020 | INFO     | mean y: 2946197.8628318585
[2025-11-26 06:52:39] 2025-11-26 11:52:07,021 | INFO     | intersect: -9313077250.194605
[2025-11-26 06:52:39] 2025-11-26 11:52:07,022 | INFO     | chi2: 0.22618232059933774
[2025-11-26 06:52:39] 2025-11-26 11:52:07,022 | INFO     | current memory leak: 5.28 B/s (using 1130 data points, chi2=0.23)
[2025-11-26 06:52:39] 2025-11-26 11:52:07,023 | INFO     | could have reported an average CPU frequency of 2568 MHz (42 samples)
[2025-11-26 06:52:39] 2025-11-26 11:52:07,023 | INFO     | ..............................
[2025-11-26 06:52:39] 2025-11-26 11:52:07,023 | INFO     | . Timing measurements:
[2025-11-26 06:52:39] 2025-11-26 11:52:07,023 | INFO     | . get job = 0 s
[2025-11-26 06:52:39] 2025-11-26 11:52:07,023 | INFO     | . initial setup = 2 s
[2025-11-26 06:52:39] 2025-11-26 11:52:07,023 | INFO     | . payload setup = 6 s
[2025-11-26 06:52:39] 2025-11-26 11:52:07,023 | INFO     | . stage-in = 0 s
[2025-11-26 06:52:39] 2025-11-26 11:52:07,024 | INFO     | . payload execution = 70811 s
[2025-11-26 06:52:39] 2025-11-26 11:52:07,024 | INFO     | . stage-out = 3 s
[2025-11-26 06:52:39] 2025-11-26 11:52:07,024 | INFO     | . log creation = 0 s
[2025-11-26 06:52:39] 2025-11-26 11:52:07,024 | INFO     | ..............................
[2025-11-26 06:52:39] 2025-11-26 11:52:07,105 | INFO     | 
[2025-11-26 06:52:39] 2025-11-26 11:52:07,105 | INFO     | job summary report
[2025-11-26 06:52:39] 2025-11-26 11:52:07,106 | INFO     | --------------------------------------------------
[2025-11-26 06:52:39] 2025-11-26 11:52:07,106 | INFO     | PanDA job id: 6895366948
[2025-11-26 06:52:39] 2025-11-26 11:52:07,106 | INFO     | task id: 47556137
[2025-11-26 06:52:39] 2025-11-26 11:52:07,106 | INFO     | errors: (none)
[2025-11-26 06:52:39] 2025-11-26 11:52:07,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 06:52:39] 2025-11-26 11:52:07,107 | INFO     | pilot state: finished 
[2025-11-26 06:52:39] 2025-11-26 11:52:07,107 | INFO     | transexitcode: 0
[2025-11-26 06:52:39] 2025-11-26 11:52:07,107 | INFO     | exeerrorcode: 0
[2025-11-26 06:52:39] 2025-11-26 11:52:07,107 | INFO     | exeerrordiag: 
[2025-11-26 06:52:39] 2025-11-26 11:52:07,107 | INFO     | exitcode: 0
[2025-11-26 06:52:39] 2025-11-26 11:52:07,107 | INFO     | exitmsg: OK
[2025-11-26 06:52:39] 2025-11-26 11:52:07,108 | INFO     | cpuconsumptiontime: 545568 s
[2025-11-26 06:52:39] 2025-11-26 11:52:07,108 | INFO     | nevents: 1000
[2025-11-26 06:52:39] 2025-11-26 11:52:07,108 | INFO     | neventsw: 0
[2025-11-26 06:52:39] 2025-11-26 11:52:07,108 | INFO     | pid: 14191
[2025-11-26 06:52:39] 2025-11-26 11:52:07,108 | INFO     | pgrp: 14191
[2025-11-26 06:52:39] 2025-11-26 11:52:07,108 | INFO     | corecount: 8
[2025-11-26 06:52:39] 2025-11-26 11:52:07,108 | INFO     | event service: False
[2025-11-26 06:52:39] 2025-11-26 11:52:07,109 | INFO     | sizes: {0: 2283481, 1: 2284337, 5: 2284599, 12: 2284655, 70821: 2341394, 70824: 2350388, 70827: 2350600, 70834: 2350846}
[2025-11-26 06:52:39] 2025-11-26 11:52:07,109 | INFO     | --------------------------------------------------
[2025-11-26 06:52:39] 2025-11-26 11:52:07,109 | INFO     | 
[2025-11-26 06:52:39] 2025-11-26 11:52:07,109 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 06:52:39] 2025-11-26 11:52:07,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,228 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,228 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,228 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 06:52:39] 2025-11-26 11:52:07,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,231 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 06:52:39] 2025-11-26 11:52:07,231 | INFO     | job 6895366948 has completed (purged errors)
[2025-11-26 06:52:39] 2025-11-26 11:52:07,231 | INFO     | overall cleanup function is called
[2025-11-26 06:52:39] 2025-11-26 11:52:07,324 | INFO     | PID=27254 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 06:52:39] 2025-11-26 11:52:07,324 | INFO     | .. there are 2 such processes running
[2025-11-26 06:52:39] 2025-11-26 11:52:08,244 | INFO     | --- collectZombieJob: --- 10, [14191]
[2025-11-26 06:52:39] 2025-11-26 11:52:08,244 | INFO     | zombie collector waiting for pid 14191
[2025-11-26 06:52:39] 2025-11-26 11:52:08,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 06:52:39] 2025-11-26 11:52:08,244 | INFO     | collected zombie processes
[2025-11-26 06:52:39] 2025-11-26 11:52:08,244 | INFO     | will attempt to kill all subprocesses of pid=14191
[2025-11-26 06:52:39] 2025-11-26 11:52:08,352 | INFO     | process IDs to be killed: [14191] (in reverse order)
[2025-11-26 06:52:39] 2025-11-26 11:52:08,396 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 06:52:39] 2025-11-26 11:52:08,396 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 06:52:39] 2025-11-26 11:52:08,399 | INFO     | did not find any defunct processes belonging to 14191
[2025-11-26 06:52:39] 2025-11-26 11:52:08,401 | INFO     | did not find any defunct processes belonging to 14191
[2025-11-26 06:52:39] 2025-11-26 11:52:08,403 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 06:52:39] 2025-11-26 11:52:08,403 | INFO     | ready for new job
[2025-11-26 06:52:39] 2025-11-26 11:52:08,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 06:52:39] 2025-11-26 11:52:08,407 | INFO     | ***************************************
[2025-11-26 06:52:39] 2025-11-26 11:52:08,407 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 06:52:39] 2025-11-26 11:52:08,407 | INFO     | ***************************************
[2025-11-26 06:52:39] 2025-11-26 11:52:08,407 | INFO     | 
[2025-11-26 06:52:39] 2025-11-26 11:52:08,408 | INFO     | architecture information:
[2025-11-26 06:52:39] 2025-11-26 11:52:08,409 | INFO     | executing command: cat /etc/os-release
[2025-11-26 06:52:39] 2025-11-26 11:52:08,419 | INFO     | cat /etc/os-release:
[2025-11-26 06:52:39] NAME="CentOS Linux"
[2025-11-26 06:52:39] VERSION="7 (Core)"
[2025-11-26 06:52:39] ID="centos"
[2025-11-26 06:52:39] ID_LIKE="rhel fedora"
[2025-11-26 06:52:39] VERSION_ID="7"
[2025-11-26 06:52:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 06:52:39] ANSI_COLOR="0;31"
[2025-11-26 06:52:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 06:52:39] HOME_URL="https://www.centos.org/"
[2025-11-26 06:52:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 06:52:39] 
[2025-11-26 06:52:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 06:52:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 06:52:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 06:52:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 06:52:39] 
[2025-11-26 06:52:39] 2025-11-26 11:52:08,419 | INFO     | ***************************************
[2025-11-26 06:52:39] 2025-11-26 11:52:08,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 06:52:39] 2025-11-26 11:52:08,934 | INFO     | sufficient remaining disk space (27510439936 B)
[2025-11-26 06:52:39] 2025-11-26 11:52:08,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 06:52:39] 2025-11-26 11:52:08,935 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 06:52:39] 2025-11-26 11:52:08,935 | INFO     | update_server=False
[2025-11-26 06:52:39] 2025-11-26 11:52:08,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 06:52:39] 2025-11-26 11:52:08,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:52:39] 2025-11-26 11:52:09,066 | INFO     | all job control threads have been joined
[2025-11-26 06:52:39] 2025-11-26 11:52:09,085 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 06:52:39] 2025-11-26 11:52:09,086 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 06:52:39] 2025-11-26 11:52:09,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 06:52:39] 2025-11-26 11:52:09,086 | INFO     | will abort loop
[2025-11-26 06:52:39] 2025-11-26 11:52:09,214 | INFO     | all data control threads have been joined
[2025-11-26 06:52:39] 2025-11-26 11:52:09,222 | INFO     | all payload control threads have been joined
[2025-11-26 06:52:39] 2025-11-26 11:52:09,940 | INFO     | [job] retrieve thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:09,941 | INFO     | [job] queue monitor thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:10,067 | INFO     | [job] control thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:10,091 | INFO     | [job] job monitor thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:10,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 06:52:39] 2025-11-26 11:52:10,220 | INFO     | [data] control thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:10,223 | INFO     | [payload] control thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:10,380 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:10,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 06:52:39] 2025-11-26 11:52:10,860 | INFO     | [payload] validate_post thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:10,980 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:11,098 | INFO     | [payload] failed_post thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:11,102 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:11,162 | INFO     | [job] validate thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:11,275 | INFO     | [data] copytool_in thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:11,280 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:12,153 | INFO     | [data] copytool_out thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:14,251 | INFO     | [monitor] cgroup control has ended
[2025-11-26 06:52:39] 2025-11-26 11:52:14,621 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 06:52:39] 2025-11-26 11:52:14,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140224299198272)>', '<ExcThread(monitor, started 140223417669376)>']
[2025-11-26 06:52:39] 2025-11-26 11:52:19,749 | INFO     | all workflow threads have been joined
[2025-11-26 06:52:39] 2025-11-26 11:52:19,750 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 06:52:39] 2025-11-26 11:52:19,750 | INFO     | traces error code: 0
[2025-11-26 06:52:39] 2025-11-26 11:52:19,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 06:52:39] 2025-11-26 11:52:39,527 | INFO     | PID=27254 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 06:52:39] 2025-11-26 11:52:39,527 | INFO     | .. there are 2 such processes running
[2025-11-26 06:52:39] 2025-11-26 11:52:39,527 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 06:52:39] 2025-11-26 11:52:39,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 06:52:39] 2025-11-26 11:52:39,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 06:52:39] 2025-11-26 11:52:39,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 06:52:39] 2025-11-26 11:52:39,528 | INFO     | [monitor] control thread has ended
[2025-11-26 06:52:39] 2025-11-26 11:52:39,607 [wrapper] ==== pilot stdout END ====
[2025-11-26 06:52:39] 2025-11-26 11:52:39,609 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 06:52:39] 2025-11-26 11:52:39,612 [wrapper] pilotpid: 27254
[2025-11-26 06:52:39] 2025-11-26 11:52:39,614 [wrapper] Pilot exit status: 0
[2025-11-26 06:52:39] 2025-11-26 11:52:39,622 [wrapper] pandaids: 6895366948 6895366948 6895366948
[2025-11-26 06:52:39] 2025-11-26 11:52:39,648 [wrapper] cleanup supervisor_pilot  2814 27255
[2025-11-26 06:52:39] 2025-11-26 11:52:39,650 [wrapper] Test setup, not cleaning
[2025-11-26 06:52:39] 2025-11-26 11:52:39,652 [wrapper] apfmon messages muted
[2025-11-26 06:52:39] 2025-11-26 11:52:39,655 [wrapper] ==== wrapper stdout END ====
[2025-11-26 06:52:39] 2025-11-26 11:52:39,657 [wrapper] ==== wrapper stderr END ====
[2025-11-26 06:52:39]  *** Error codes and diagnostics ***
[2025-11-26 06:52:39]     "exeErrorCode": 0,
[2025-11-26 06:52:39]     "exeErrorDiag": "",
[2025-11-26 06:52:39]     "pilotErrorCode": 0,
[2025-11-26 06:52:39]     "pilotErrorDiag": "",
[2025-11-26 06:52:39]  *** Listing of results directory ***
[2025-11-26 06:52:39] total 1724384
[2025-11-26 06:52:39] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 13:33 pilot3.tar.gz
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 13:49 queuedata.json
[2025-11-26 06:52:39] -rwx------ 1 boincer umatlas     36292 Nov 23 13:49 runpilot2-wrapper.sh
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas       100 Nov 25 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 06:52:39] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 01:01 run_atlas
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas       105 Nov 25 01:01 job.xml
[2025-11-26 06:52:39] -rw-r--r-- 3 boincer umatlas 408565646 Nov 25 01:01 EVNT.47483658._000853.pool.root.1
[2025-11-26 06:52:39] -rw-r--r-- 3 boincer umatlas 408565646 Nov 25 01:01 ATLAS.root_0
[2025-11-26 06:52:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:01 start_atlas.sh
[2025-11-26 06:52:39] drwxrwx--x 2 boincer umatlas      4096 Nov 25 01:01 shared
[2025-11-26 06:52:39] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 01:01 input.tar.gz
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas         0 Nov 25 01:01 boinc_lockfile
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas      2783 Nov 25 11:11 pandaJob.out
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas        57 Nov 25 11:11 setup.sh.local
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas    991909 Nov 25 11:11 agis_schedconf.cvmfs.json
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas       534 Nov 26 06:39 boinc_task_state.xml
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 06:46 init_data.xml
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas 920414235 Nov 26 06:51 HITS.47556137._008391.pool.root.1
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas      1066 Nov 26 06:51 memory_monitor_summary.json
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas   1516240 Nov 26 06:51 agis_ddmendpoints.agis.ALL.json
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas   2319213 Nov 26 06:51 log.47556137._008391.job.log.tgz.1
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas        96 Nov 26 06:52 pilot_heartbeat.json
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas      8658 Nov 26 06:52 heartbeat.json
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 06:52 boinc_mmap_file
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas        30 Nov 26 06:52 wrapper_checkpoint.txt
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas       820 Nov 26 06:52 pilotlog.txt
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas   9828341 Nov 26 06:52 log.47556137._008391.job.log.1
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas       353 Nov 26 06:52 output.list
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas       620 Nov 26 06:52 runtime_log
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas  12165120 Nov 26 06:52 result.tar.gz
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas      9428 Nov 26 06:52 runtime_log.err
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas       918 Nov 26 06:52 8a0MDmpKUh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0gIKDmMgM5Eo.diag
[2025-11-26 06:52:39] -rw-r--r-- 1 boincer umatlas     25695 Nov 26 06:52 stderr.txt
[2025-11-26 06:52:39] HITS file was successfully produced:
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas 920414235 Nov 26 06:51 shared/HITS.pool.root.1
[2025-11-26 06:52:39]  *** Contents of shared directory: ***
[2025-11-26 06:52:39] total 1310320
[2025-11-26 06:52:39] -rw-r--r-- 3 boincer umatlas 408565646 Nov 25 01:01 ATLAS.root_0
[2025-11-26 06:52:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:01 start_atlas.sh
[2025-11-26 06:52:39] -rw-r--r-- 2 boincer umatlas    590108 Nov 25 01:01 input.tar.gz
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas 920414235 Nov 26 06:51 HITS.pool.root.1
[2025-11-26 06:52:39] -rw------- 1 boincer umatlas  12165120 Nov 26 06:52 result.tar.gz
06:52:41 (16010): run_atlas exited; CPU time 544148.708734
06:52:41 (16010): called boinc_finish(0)

</stderr_txt>
]]>

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