Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:03:22 (1987): wrapper (7.7.26015): starting
01:03:22 (1987): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:03:22] Arguments: --nthreads 8
[2025-11-25 01:03:22] Threads: 8
[2025-11-25 01:03:22] Checking for CVMFS
[2025-11-25 01:03:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:03:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:03:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:03:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:03:22] 2.11.2.0 28294 115872 141228 153272 3 90 12029902 18432000 1692 130560 0 82331505 99.973 4887200 29870 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 01:03:22] CVMFS is ok
[2025-11-25 01:03:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 01:03:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 01:03:22] Further information can be found at the LHC@home message board.
[2025-11-25 01:03:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:03:22] Checking for apptainer binary...
[2025-11-25 01:03:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:03:22] Running /usr/bin/apptainer --version
[2025-11-25 01:03:22] apptainer version 1.3.2-1.el7
[2025-11-25 01:03:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:03:23] c-206-25.aglt2.org
[2025-11-25 01:03:23] apptainer works
[2025-11-25 01:03:23] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:03:23] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:03:23] Starting ATLAS job with PandaID=6894258921
[2025-11-25 01:03:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 21:00:52]  *** The last 200 lines of the pilot log: ***
[2025-11-25 21:00:52] 2025-11-26 02:00:19,708 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2428.0
[2025-11-25 21:00:52] 2025-11-26 02:00:19,711 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6894258921/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 21:00:52] 2025-11-26 02:00:19,712 | INFO     | extracted standard info from prmon json
[2025-11-25 21:00:52] 2025-11-26 02:00:19,712 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 21:00:52] 2025-11-26 02:00:19,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 21:00:52] 2025-11-26 02:00:19,727 | INFO     | fitting pss+swap vs Time
[2025-11-25 21:00:52] 2025-11-26 02:00:19,728 | INFO     | sum of square deviations: 505598548582.37915
[2025-11-25 21:00:52] 2025-11-26 02:00:19,774 | INFO     | sum of deviations: 2450605192907.7593
[2025-11-25 21:00:52] 2025-11-26 02:00:19,774 | INFO     | mean x: 1764086507.6482582
[2025-11-25 21:00:52] 2025-11-26 02:00:19,774 | INFO     | mean y: 2865798.881053526
[2025-11-25 21:00:52] 2025-11-26 02:00:19,774 | INFO     | intersect: -8547553438.87702
[2025-11-25 21:00:52] 2025-11-26 02:00:19,776 | INFO     | chi2: 5.822649227856211
[2025-11-25 21:00:52] 2025-11-26 02:00:19,778 | INFO     | sum of square deviations: 499182605180.2655
[2025-11-25 21:00:52] 2025-11-26 02:00:19,825 | INFO     | sum of deviations: 2820292932186.3037
[2025-11-25 21:00:52] 2025-11-26 02:00:19,826 | INFO     | mean x: 1764086355.1510239
[2025-11-25 21:00:52] 2025-11-26 02:00:19,826 | INFO     | mean y: 2874581.5802047784
[2025-11-25 21:00:52] 2025-11-26 02:00:19,826 | INFO     | intersect: -9963899555.916162
[2025-11-25 21:00:52] 2025-11-26 02:00:19,828 | INFO     | chi2: 2.923095601833384
[2025-11-25 21:00:52] 2025-11-26 02:00:19,828 | INFO     | current chi2=2.923095601833384 (change=49.797841370059444 %)
[2025-11-25 21:00:52] 2025-11-26 02:00:19,830 | INFO     | sum of square deviations: 492821174428.1406
[2025-11-25 21:00:52] 2025-11-26 02:00:19,871 | INFO     | monitor loop #5145: job 0:6894258921 is in state 'finished'
[2025-11-25 21:00:52] 2025-11-26 02:00:19,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 21:00:52] 2025-11-26 02:00:19,878 | INFO     | sum of deviations: 2931970305676.088
[2025-11-25 21:00:52] 2025-11-26 02:00:19,879 | INFO     | mean x: 1764086202.6538131
[2025-11-25 21:00:52] 2025-11-26 02:00:19,879 | INFO     | mean y: 2877256.3393316194
[2025-11-25 21:00:52] 2025-11-26 02:00:19,879 | INFO     | intersect: -10492305644.102474
[2025-11-25 21:00:52] 2025-11-26 02:00:19,881 | INFO     | chi2: 2.521514342291606
[2025-11-25 21:00:52] 2025-11-26 02:00:19,881 | INFO     | current chi2=2.521514342291606 (change=13.738218458879818 %)
[2025-11-25 21:00:52] 2025-11-26 02:00:19,881 | INFO     | right removable region: 1166
[2025-11-25 21:00:52] 2025-11-26 02:00:19,883 | INFO     | sum of square deviations: 499182139750.26465
[2025-11-25 21:00:52] 2025-11-26 02:00:19,935 | INFO     | sum of deviations: 2138150894164.8816
[2025-11-25 21:00:52] 2025-11-26 02:00:19,935 | INFO     | mean x: 1764086660.1510239
[2025-11-25 21:00:52] 2025-11-26 02:00:19,935 | INFO     | mean y: 2873217.4752559727
[2025-11-25 21:00:52] 2025-11-26 02:00:19,936 | INFO     | intersect: -7553253433.356609
[2025-11-25 21:00:52] 2025-11-26 02:00:19,937 | INFO     | chi2: 3.7368820086618615
[2025-11-25 21:00:52] 2025-11-26 02:00:19,937 | INFO     | current chi2=3.7368820086618615 (change=35.821618949941275 %)
[2025-11-25 21:00:52] 2025-11-26 02:00:19,939 | INFO     | sum of square deviations: 492820458167.05566
[2025-11-25 21:00:52] 2025-11-26 02:00:19,987 | INFO     | sum of deviations: 2047330338467.0518
[2025-11-25 21:00:52] 2025-11-26 02:00:19,987 | INFO     | mean x: 1764086812.6512425
[2025-11-25 21:00:52] 2025-11-26 02:00:19,987 | INFO     | mean y: 2875394.206512425
[2025-11-25 21:00:52] 2025-11-26 02:00:19,987 | INFO     | intersect: -7325693035.48772
[2025-11-25 21:00:52] 2025-11-26 02:00:19,989 | INFO     | chi2: 3.6572299187244592
[2025-11-25 21:00:52] 2025-11-26 02:00:19,989 | INFO     | current chi2=3.6572299187244592 (change=2.1315120400583596 %)
[2025-11-25 21:00:52] 2025-11-26 02:00:19,989 | INFO     | left removable region: 20
[2025-11-25 21:00:52] 2025-11-26 02:00:19,991 | INFO     | sum of square deviations: 466692112495.04095
[2025-11-25 21:00:52] 2025-11-26 02:00:20,035 | INFO     | sum of deviations: 2390529181296.913
[2025-11-25 21:00:52] 2025-11-26 02:00:20,035 | INFO     | mean x: 1764086782.1561954
[2025-11-25 21:00:52] 2025-11-26 02:00:20,035 | INFO     | mean y: 2890841.6038394417
[2025-11-25 21:00:52] 2025-11-26 02:00:20,036 | INFO     | intersect: -9033261298.484806
[2025-11-25 21:00:52] 2025-11-26 02:00:20,037 | INFO     | chi2: 0.25444170521190107
[2025-11-25 21:00:52] 2025-11-26 02:00:20,038 | INFO     | current memory leak: 5.12 B/s (using 1146 data points, chi2=0.25)
[2025-11-25 21:00:52] 2025-11-26 02:00:20,039 | INFO     | could have reported an average CPU frequency of 2623 MHz (43 samples)
[2025-11-25 21:00:52] 2025-11-26 02:00:20,039 | INFO     | ..............................
[2025-11-25 21:00:52] 2025-11-26 02:00:20,039 | INFO     | . Timing measurements:
[2025-11-25 21:00:52] 2025-11-26 02:00:20,039 | INFO     | . get job = 0 s
[2025-11-25 21:00:52] 2025-11-26 02:00:20,039 | INFO     | . initial setup = 2 s
[2025-11-25 21:00:52] 2025-11-26 02:00:20,039 | INFO     | . payload setup = 5 s
[2025-11-25 21:00:52] 2025-11-26 02:00:20,040 | INFO     | . stage-in = 0 s
[2025-11-25 21:00:52] 2025-11-26 02:00:20,040 | INFO     | . payload execution = 71772 s
[2025-11-25 21:00:52] 2025-11-26 02:00:20,040 | INFO     | . stage-out = 4 s
[2025-11-25 21:00:52] 2025-11-26 02:00:20,040 | INFO     | . log creation = 0 s
[2025-11-25 21:00:52] 2025-11-26 02:00:20,040 | INFO     | ..............................
[2025-11-25 21:00:52] 2025-11-26 02:00:20,197 | INFO     | 
[2025-11-25 21:00:52] 2025-11-26 02:00:20,197 | INFO     | job summary report
[2025-11-25 21:00:52] 2025-11-26 02:00:20,197 | INFO     | --------------------------------------------------
[2025-11-25 21:00:52] 2025-11-26 02:00:20,197 | INFO     | PanDA job id: 6894258921
[2025-11-25 21:00:52] 2025-11-26 02:00:20,197 | INFO     | task id: 47533967
[2025-11-25 21:00:52] 2025-11-26 02:00:20,197 | INFO     | errors: (none)
[2025-11-25 21:00:52] 2025-11-26 02:00:20,198 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 21:00:52] 2025-11-26 02:00:20,198 | INFO     | pilot state: finished 
[2025-11-25 21:00:52] 2025-11-26 02:00:20,198 | INFO     | transexitcode: 0
[2025-11-25 21:00:52] 2025-11-26 02:00:20,198 | INFO     | exeerrorcode: 0
[2025-11-25 21:00:52] 2025-11-26 02:00:20,198 | INFO     | exeerrordiag: 
[2025-11-25 21:00:52] 2025-11-26 02:00:20,199 | INFO     | exitcode: 0
[2025-11-25 21:00:52] 2025-11-26 02:00:20,199 | INFO     | exitmsg: OK
[2025-11-25 21:00:52] 2025-11-26 02:00:20,199 | INFO     | cpuconsumptiontime: 553104 s
[2025-11-25 21:00:52] 2025-11-26 02:00:20,199 | INFO     | nevents: 1000
[2025-11-25 21:00:52] 2025-11-26 02:00:20,199 | INFO     | neventsw: 0
[2025-11-25 21:00:52] 2025-11-26 02:00:20,199 | INFO     | pid: 12255
[2025-11-25 21:00:52] 2025-11-26 02:00:20,200 | INFO     | pgrp: 12255
[2025-11-25 21:00:52] 2025-11-26 02:00:20,200 | INFO     | corecount: 8
[2025-11-25 21:00:52] 2025-11-26 02:00:20,200 | INFO     | event service: False
[2025-11-25 21:00:52] 2025-11-26 02:00:20,200 | INFO     | sizes: {0: 2284139, 1: 2284338, 4: 2284600, 11: 2284628, 71781: 2342766, 71785: 2351949, 71790: 2352139}
[2025-11-25 21:00:52] 2025-11-26 02:00:20,200 | INFO     | --------------------------------------------------
[2025-11-25 21:00:52] 2025-11-26 02:00:20,200 | INFO     | 
[2025-11-25 21:00:52] 2025-11-26 02:00:20,201 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 21:00:52] 2025-11-26 02:00:20,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,224 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,224 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,224 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,225 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 21:00:52] 2025-11-26 02:00:20,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,226 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 21:00:52] 2025-11-26 02:00:20,226 | INFO     | job 6894258921 has completed (purged errors)
[2025-11-25 21:00:52] 2025-11-26 02:00:20,226 | INFO     | overall cleanup function is called
[2025-11-25 21:00:52] 2025-11-26 02:00:21,238 | INFO     | --- collectZombieJob: --- 10, [12255]
[2025-11-25 21:00:52] 2025-11-26 02:00:21,238 | INFO     | zombie collector waiting for pid 12255
[2025-11-25 21:00:52] 2025-11-26 02:00:21,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 21:00:52] 2025-11-26 02:00:21,239 | INFO     | collected zombie processes
[2025-11-25 21:00:52] 2025-11-26 02:00:21,239 | INFO     | will attempt to kill all subprocesses of pid=12255
[2025-11-25 21:00:52] 2025-11-26 02:00:21,414 | INFO     | process IDs to be killed: [12255] (in reverse order)
[2025-11-25 21:00:52] 2025-11-26 02:00:21,490 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 21:00:52] 2025-11-26 02:00:21,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 21:00:52] 2025-11-26 02:00:21,497 | INFO     | did not find any defunct processes belonging to 12255
[2025-11-25 21:00:52] 2025-11-26 02:00:21,503 | INFO     | did not find any defunct processes belonging to 12255
[2025-11-25 21:00:52] 2025-11-26 02:00:21,505 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 21:00:52] 2025-11-26 02:00:21,505 | INFO     | ready for new job
[2025-11-25 21:00:52] 2025-11-26 02:00:21,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 21:00:52] 2025-11-26 02:00:21,510 | INFO     | ***************************************
[2025-11-25 21:00:52] 2025-11-26 02:00:21,511 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 21:00:52] 2025-11-26 02:00:21,511 | INFO     | ***************************************
[2025-11-25 21:00:52] 2025-11-26 02:00:21,511 | INFO     | 
[2025-11-25 21:00:52] 2025-11-26 02:00:21,512 | INFO     | architecture information:
[2025-11-25 21:00:52] 2025-11-26 02:00:21,513 | INFO     | executing command: cat /etc/os-release
[2025-11-25 21:00:52] 2025-11-26 02:00:21,533 | INFO     | cat /etc/os-release:
[2025-11-25 21:00:52] NAME="CentOS Linux"
[2025-11-25 21:00:52] VERSION="7 (Core)"
[2025-11-25 21:00:52] ID="centos"
[2025-11-25 21:00:52] ID_LIKE="rhel fedora"
[2025-11-25 21:00:52] VERSION_ID="7"
[2025-11-25 21:00:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 21:00:52] ANSI_COLOR="0;31"
[2025-11-25 21:00:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 21:00:52] HOME_URL="https://www.centos.org/"
[2025-11-25 21:00:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 21:00:52] 
[2025-11-25 21:00:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 21:00:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 21:00:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 21:00:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 21:00:52] 
[2025-11-25 21:00:52] 2025-11-26 02:00:21,534 | INFO     | ***************************************
[2025-11-25 21:00:52] 2025-11-26 02:00:22,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 21:00:52] 2025-11-26 02:00:22,056 | INFO     | sufficient remaining disk space (26571964416 B)
[2025-11-25 21:00:52] 2025-11-26 02:00:22,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 21:00:52] 2025-11-26 02:00:22,057 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 21:00:52] 2025-11-26 02:00:22,057 | INFO     | update_server=False
[2025-11-25 21:00:52] 2025-11-26 02:00:22,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 21:00:52] 2025-11-26 02:00:22,058 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:00:52] 2025-11-26 02:00:22,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 21:00:52] 2025-11-26 02:00:22,321 | INFO     | all job control threads have been joined
[2025-11-25 21:00:52] 2025-11-26 02:00:22,382 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 21:00:52] 2025-11-26 02:00:22,382 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 21:00:52] 2025-11-26 02:00:22,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 21:00:52] 2025-11-26 02:00:22,382 | INFO     | will abort loop
[2025-11-25 21:00:52] 2025-11-26 02:00:22,696 | INFO     | all data control threads have been joined
[2025-11-25 21:00:52] 2025-11-26 02:00:23,048 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 21:00:52] 2025-11-26 02:00:23,062 | INFO     | [job] retrieve thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:23,063 | INFO     | [job] queue monitor thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:23,311 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:23,327 | INFO     | [job] control thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:23,387 | INFO     | [job] job monitor thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:23,426 | INFO     | all payload control threads have been joined
[2025-11-25 21:00:52] 2025-11-26 02:00:23,654 | INFO     | [job] validate thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:23,701 | INFO     | [data] control thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:23,707 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:23,713 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:24,242 | INFO     | [payload] failed_post thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:24,351 | INFO     | [data] copytool_in thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:24,418 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:24,431 | INFO     | [payload] control thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:24,662 | INFO     | [payload] validate_post thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:25,053 | INFO     | [data] copytool_out thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:26,066 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 21:00:52] 2025-11-26 02:00:33,341 | INFO     | [monitor] cgroup control has ended
[2025-11-25 21:00:52] 2025-11-26 02:00:34,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818062714688)>', '<ExcThread(monitor, started 139817492936448)>']
[2025-11-25 21:00:52] 2025-11-26 02:00:39,864 | INFO     | all workflow threads have been joined
[2025-11-25 21:00:52] 2025-11-26 02:00:39,864 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 21:00:52] 2025-11-26 02:00:39,865 | INFO     | traces error code: 0
[2025-11-25 21:00:52] 2025-11-26 02:00:39,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 21:00:52] 2025-11-26 02:00:52,623 | INFO     | PID=5882 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 21:00:52] 2025-11-26 02:00:52,624 | INFO     | .. there are 3 such processes running
[2025-11-25 21:00:52] 2025-11-26 02:00:52,624 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 21:00:52] 2025-11-26 02:00:52,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 21:00:52] 2025-11-26 02:00:52,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 21:00:52] 2025-11-26 02:00:52,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 21:00:52] 2025-11-26 02:00:52,625 | INFO     | [monitor] control thread has ended
[2025-11-25 21:00:52] 2025-11-26 02:00:52,743 [wrapper] ==== pilot stdout END ====
[2025-11-25 21:00:52] 2025-11-26 02:00:52,745 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 21:00:52] 2025-11-26 02:00:52,748 [wrapper] pilotpid: 5882
[2025-11-25 21:00:52] 2025-11-26 02:00:52,750 [wrapper] Pilot exit status: 0
[2025-11-25 21:00:52] 2025-11-26 02:00:52,758 [wrapper] pandaids: 6894258921
[2025-11-25 21:00:52] 2025-11-26 02:00:52,785 [wrapper] cleanup supervisor_pilot 26132 5883
[2025-11-25 21:00:52] 2025-11-26 02:00:52,787 [wrapper] Test setup, not cleaning
[2025-11-25 21:00:52] 2025-11-26 02:00:52,791 [wrapper] apfmon messages muted
[2025-11-25 21:00:52] 2025-11-26 02:00:52,793 [wrapper] ==== wrapper stdout END ====
[2025-11-25 21:00:52] 2025-11-26 02:00:52,795 [wrapper] ==== wrapper stderr END ====
[2025-11-25 21:00:52]  *** Error codes and diagnostics ***
[2025-11-25 21:00:52]     "exeErrorCode": 0,
[2025-11-25 21:00:52]     "exeErrorDiag": "",
[2025-11-25 21:00:52]     "pilotErrorCode": 0,
[2025-11-25 21:00:52]     "pilotErrorDiag": "",
[2025-11-25 21:00:52]  *** Listing of results directory ***
[2025-11-25 21:00:52] total 1328900
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 22:09 pilot3.tar.gz
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 23:04 queuedata.json
[2025-11-25 21:00:52] -rwx------ 1 boincer umatlas     36292 Nov 20 23:04 runpilot2-wrapper.sh
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas       100 Nov 25 01:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 21:00:52] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 01:02 run_atlas
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas       105 Nov 25 01:02 job.xml
[2025-11-25 21:00:52] -rw-r--r-- 2 boincer umatlas 414108387 Nov 25 01:03 EVNT.47493127._002177.pool.root.1
[2025-11-25 21:00:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:03 start_atlas.sh
[2025-11-25 21:00:52] drwxrwx--x 2 boincer umatlas      4096 Nov 25 01:03 shared
[2025-11-25 21:00:52] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 01:03 input.tar.gz
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas         0 Nov 25 01:03 boinc_lockfile
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 01:03 pandaJob.out
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas        57 Nov 25 01:03 setup.sh.local
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas    991801 Nov 25 01:03 agis_schedconf.cvmfs.json
[2025-11-25 21:00:52] drwx------ 5 boincer umatlas      4096 Nov 25 01:03 pilot3
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas       533 Nov 25 20:48 boinc_task_state.xml
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas      5953 Nov 25 20:55 init_data.xml
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas 918127323 Nov 25 20:59 HITS.47533967._001490.pool.root.1
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas      1067 Nov 25 21:00 memory_monitor_summary.json
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas   1516240 Nov 25 21:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas   2344854 Nov 25 21:00 log.47533967._001490.job.log.tgz.1
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas        95 Nov 25 21:00 pilot_heartbeat.json
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas      8660 Nov 25 21:00 heartbeat.json
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 21:00 boinc_mmap_file
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas        29 Nov 25 21:00 wrapper_checkpoint.txt
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas       819 Nov 25 21:00 pilotlog.txt
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas   9971909 Nov 25 21:00 log.47533967._001490.job.log.1
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas       353 Nov 25 21:00 output.list
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas       620 Nov 25 21:00 runtime_log
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas  12339200 Nov 25 21:00 result.tar.gz
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 21:00 runtime_log.err
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas       668 Nov 25 21:00 9qPLDmTZXg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdzIKDmESYeVo.diag
[2025-11-25 21:00:52] -rw-r--r-- 1 boincer umatlas     21298 Nov 25 21:00 stderr.txt
[2025-11-25 21:00:52] HITS file was successfully produced:
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas 918127323 Nov 25 20:59 shared/HITS.pool.root.1
[2025-11-25 21:00:52]  *** Contents of shared directory: ***
[2025-11-25 21:00:52] total 1313672
[2025-11-25 21:00:52] -rw-r--r-- 2 boincer umatlas 414108387 Nov 25 01:03 ATLAS.root_0
[2025-11-25 21:00:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 01:03 start_atlas.sh
[2025-11-25 21:00:52] -rw-r--r-- 2 boincer umatlas    590106 Nov 25 01:03 input.tar.gz
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas 918127323 Nov 25 20:59 HITS.pool.root.1
[2025-11-25 21:00:52] -rw------- 1 boincer umatlas  12339200 Nov 25 21:00 result.tar.gz
21:00:54 (1987): run_atlas exited; CPU time 551709.475776
21:00:54 (1987): called boinc_finish(0)

</stderr_txt>
]]>

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