Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:51:17 (24807): wrapper (7.7.26015): starting
00:51:17 (24807): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:51:17] Arguments: --nthreads 12
[2025-11-25 00:51:17] Threads: 12
[2025-11-25 00:51:17] Checking for CVMFS
[2025-11-25 00:51:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:51:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:51:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:51:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:51:18] 2.11.2.0 25590 186526 88868 153272 3 82 15720362 20275201 1 130560 2 98283141 99.967 7410938 25607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:51:18] CVMFS is ok
[2025-11-25 00:51:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:51:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:51:18] Further information can be found at the LHC@home message board.
[2025-11-25 00:51:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:51:18] Checking for apptainer binary...
[2025-11-25 00:51:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:51:18] Running /usr/bin/apptainer --version
[2025-11-25 00:51:18] apptainer version 1.3.2-1.el7
[2025-11-25 00:51:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:51:19] c-205-24.aglt2.org
[2025-11-25 00:51:19] apptainer works
[2025-11-25 00:51:19] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:51:19] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:51:19] Starting ATLAS job with PandaID=6895357335
[2025-11-25 00:51:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 08:03:23]  *** The last 200 lines of the pilot log: ***
[2025-11-25 08:03:23] 2025-11-25 13:02:46,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 08:03:23] 2025-11-25 13:02:47,956 | INFO     | time since job start (25873s) is within the limit (172800.0s)
[2025-11-25 08:03:23] 2025-11-25 13:02:48,758 | INFO     | monitor loop #1940: job 0:6895357335 is in state 'finished'
[2025-11-25 08:03:23] 2025-11-25 13:02:48,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,613 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 08:03:23] 2025-11-25 13:02:49,617 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-25 08:03:23] 2025-11-25 13:02:49,619 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895357335/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,620 | INFO     | extracted standard info from prmon json
[2025-11-25 08:03:23] 2025-11-25 13:02:49,620 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 08:03:23] 2025-11-25 13:02:49,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 08:03:23] 2025-11-25 13:02:49,626 | INFO     | fitting pss+swap vs Time
[2025-11-25 08:03:23] 2025-11-25 13:02:49,627 | INFO     | sum of square deviations: 23636006368.88443
[2025-11-25 08:03:23] 2025-11-25 13:02:49,631 | INFO     | sum of deviations: 413825862765.2074
[2025-11-25 08:03:23] 2025-11-25 13:02:49,631 | INFO     | mean x: 1764062825.7334905
[2025-11-25 08:03:23] 2025-11-25 13:02:49,631 | INFO     | mean y: 3424715.886792453
[2025-11-25 08:03:23] 2025-11-25 13:02:49,632 | INFO     | intersect: -30882284546.41134
[2025-11-25 08:03:23] 2025-11-25 13:02:49,632 | INFO     | chi2: 5.567614733845719
[2025-11-25 08:03:23] 2025-11-25 13:02:49,633 | INFO     | sum of square deviations: 22809676883.608646
[2025-11-25 08:03:23] 2025-11-25 13:02:49,636 | INFO     | sum of deviations: 564290725738.4314
[2025-11-25 08:03:23] 2025-11-25 13:02:49,636 | INFO     | mean x: 1764062673.2362769
[2025-11-25 08:03:23] 2025-11-25 13:02:49,636 | INFO     | mean y: 3452457.3794749402
[2025-11-25 08:03:23] 2025-11-25 13:02:49,637 | INFO     | intersect: -43637858693.49948
[2025-11-25 08:03:23] 2025-11-25 13:02:49,637 | INFO     | chi2: 2.9521974766557144
[2025-11-25 08:03:23] 2025-11-25 13:02:49,637 | INFO     | current chi2=2.9521974766557144 (change=46.97554306857467 %)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,638 | INFO     | sum of square deviations: 22002836135.826057
[2025-11-25 08:03:23] 2025-11-25 13:02:49,641 | INFO     | sum of deviations: 597779291393.8257
[2025-11-25 08:03:23] 2025-11-25 13:02:49,641 | INFO     | mean x: 1764062520.7391305
[2025-11-25 08:03:23] 2025-11-25 13:02:49,642 | INFO     | mean y: 3458744.0169082126
[2025-11-25 08:03:23] 2025-11-25 13:02:49,642 | INFO     | intersect: -47923092047.53419
[2025-11-25 08:03:23] 2025-11-25 13:02:49,642 | INFO     | chi2: 2.610717400250295
[2025-11-25 08:03:23] 2025-11-25 13:02:49,642 | INFO     | current chi2=2.610717400250295 (change=11.566979482424475 %)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,642 | INFO     | right removable region: 413
[2025-11-25 08:03:23] 2025-11-25 13:02:49,643 | INFO     | sum of square deviations: 22809616493.608643
[2025-11-25 08:03:23] 2025-11-25 13:02:49,646 | INFO     | sum of deviations: 268252672093.17877
[2025-11-25 08:03:23] 2025-11-25 13:02:49,647 | INFO     | mean x: 1764062978.2362769
[2025-11-25 08:03:23] 2025-11-25 13:02:49,647 | INFO     | mean y: 3451506.4224343677
[2025-11-25 08:03:23] 2025-11-25 13:02:49,647 | INFO     | intersect: -20742824862.80671
[2025-11-25 08:03:23] 2025-11-25 13:02:49,647 | INFO     | chi2: 3.1204877223834044
[2025-11-25 08:03:23] 2025-11-25 13:02:49,647 | INFO     | current chi2=3.1204877223834044 (change=43.952879795833326 %)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,648 | INFO     | sum of square deviations: 22002740670.301956
[2025-11-25 08:03:23] 2025-11-25 13:02:49,651 | INFO     | sum of deviations: 234704558915.80408
[2025-11-25 08:03:23] 2025-11-25 13:02:49,652 | INFO     | mean x: 1764063130.736715
[2025-11-25 08:03:23] 2025-11-25 13:02:49,652 | INFO     | mean y: 3457839.282608696
[2025-11-25 08:03:23] 2025-11-25 13:02:49,652 | INFO     | intersect: -18813909742.47652
[2025-11-25 08:03:23] 2025-11-25 13:02:49,652 | INFO     | chi2: 3.0643277069428088
[2025-11-25 08:03:23] 2025-11-25 13:02:49,652 | INFO     | current chi2=3.0643277069428088 (change=1.7997191604939595 %)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,653 | INFO     | left removable region: 20
[2025-11-25 08:03:23] 2025-11-25 13:02:49,653 | INFO     | sum of square deviations: 18821531528.03551
[2025-11-25 08:03:23] 2025-11-25 13:02:49,656 | INFO     | sum of deviations: 375702749042.9289
[2025-11-25 08:03:23] 2025-11-25 13:02:49,656 | INFO     | mean x: 1764063100.2417302
[2025-11-25 08:03:23] 2025-11-25 13:02:49,657 | INFO     | mean y: 3501459.51653944
[2025-11-25 08:03:23] 2025-11-25 13:02:49,657 | INFO     | intersect: -35209539267.73747
[2025-11-25 08:03:23] 2025-11-25 13:02:49,657 | INFO     | chi2: 0.06543905427155046
[2025-11-25 08:03:23] 2025-11-25 13:02:49,657 | INFO     | current memory leak: 19.96 B/s (using 393 data points, chi2=0.07)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,658 | INFO     | could have reported an average CPU frequency of 2401 MHz (18 samples)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,658 | INFO     | ..............................
[2025-11-25 08:03:23] 2025-11-25 13:02:49,658 | INFO     | . Timing measurements:
[2025-11-25 08:03:23] 2025-11-25 13:02:49,658 | INFO     | . get job = 0 s
[2025-11-25 08:03:23] 2025-11-25 13:02:49,658 | INFO     | . initial setup = 2 s
[2025-11-25 08:03:23] 2025-11-25 13:02:49,658 | INFO     | . payload setup = 7 s
[2025-11-25 08:03:23] 2025-11-25 13:02:49,658 | INFO     | . stage-in = 0 s
[2025-11-25 08:03:23] 2025-11-25 13:02:49,658 | INFO     | . payload execution = 25838 s
[2025-11-25 08:03:23] 2025-11-25 13:02:49,659 | INFO     | . stage-out = 3 s
[2025-11-25 08:03:23] 2025-11-25 13:02:49,659 | INFO     | . log creation = 0 s
[2025-11-25 08:03:23] 2025-11-25 13:02:49,659 | INFO     | ..............................
[2025-11-25 08:03:23] 2025-11-25 13:02:49,740 | INFO     | 
[2025-11-25 08:03:23] 2025-11-25 13:02:49,740 | INFO     | job summary report
[2025-11-25 08:03:23] 2025-11-25 13:02:49,740 | INFO     | --------------------------------------------------
[2025-11-25 08:03:23] 2025-11-25 13:02:49,740 | INFO     | PanDA job id: 6895357335
[2025-11-25 08:03:23] 2025-11-25 13:02:49,740 | INFO     | task id: 47556137
[2025-11-25 08:03:23] 2025-11-25 13:02:49,740 | INFO     | errors: (none)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,741 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 08:03:23] 2025-11-25 13:02:49,741 | INFO     | pilot state: finished 
[2025-11-25 08:03:23] 2025-11-25 13:02:49,741 | INFO     | transexitcode: 0
[2025-11-25 08:03:23] 2025-11-25 13:02:49,741 | INFO     | exeerrorcode: 0
[2025-11-25 08:03:23] 2025-11-25 13:02:49,741 | INFO     | exeerrordiag: 
[2025-11-25 08:03:23] 2025-11-25 13:02:49,741 | INFO     | exitcode: 0
[2025-11-25 08:03:23] 2025-11-25 13:02:49,742 | INFO     | exitmsg: OK
[2025-11-25 08:03:23] 2025-11-25 13:02:49,742 | INFO     | cpuconsumptiontime: 296765 s
[2025-11-25 08:03:23] 2025-11-25 13:02:49,742 | INFO     | nevents: 1000
[2025-11-25 08:03:23] 2025-11-25 13:02:49,742 | INFO     | neventsw: 0
[2025-11-25 08:03:23] 2025-11-25 13:02:49,742 | INFO     | pid: 2558
[2025-11-25 08:03:23] 2025-11-25 13:02:49,742 | INFO     | pgrp: 2558
[2025-11-25 08:03:23] 2025-11-25 13:02:49,743 | INFO     | corecount: 12
[2025-11-25 08:03:23] 2025-11-25 13:02:49,743 | INFO     | event service: False
[2025-11-25 08:03:23] 2025-11-25 13:02:49,743 | INFO     | sizes: {0: 2284139, 1: 2284338, 5: 2284600, 11: 2284656, 25849: 2321920, 25853: 2330919, 25854: 2331103, 25859: 2331349}
[2025-11-25 08:03:23] 2025-11-25 13:02:49,743 | INFO     | --------------------------------------------------
[2025-11-25 08:03:23] 2025-11-25 13:02:49,743 | INFO     | 
[2025-11-25 08:03:23] 2025-11-25 13:02:49,743 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 08:03:23] 2025-11-25 13:02:49,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,769 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,769 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,769 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 08:03:23] 2025-11-25 13:02:49,772 | INFO     | job 6895357335 has completed (purged errors)
[2025-11-25 08:03:23] 2025-11-25 13:02:49,772 | INFO     | overall cleanup function is called
[2025-11-25 08:03:23] 2025-11-25 13:02:50,789 | INFO     | --- collectZombieJob: --- 10, [2558]
[2025-11-25 08:03:23] 2025-11-25 13:02:50,789 | INFO     | zombie collector waiting for pid 2558
[2025-11-25 08:03:23] 2025-11-25 13:02:50,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 08:03:23] 2025-11-25 13:02:50,789 | INFO     | collected zombie processes
[2025-11-25 08:03:23] 2025-11-25 13:02:50,789 | INFO     | will attempt to kill all subprocesses of pid=2558
[2025-11-25 08:03:23] 2025-11-25 13:02:50,885 | INFO     | process IDs to be killed: [2558] (in reverse order)
[2025-11-25 08:03:23] 2025-11-25 13:02:50,938 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 08:03:23] 2025-11-25 13:02:50,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 08:03:23] 2025-11-25 13:02:50,942 | INFO     | did not find any defunct processes belonging to 2558
[2025-11-25 08:03:23] 2025-11-25 13:02:50,945 | INFO     | did not find any defunct processes belonging to 2558
[2025-11-25 08:03:23] 2025-11-25 13:02:50,948 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 08:03:23] 2025-11-25 13:02:50,948 | INFO     | ready for new job
[2025-11-25 08:03:23] 2025-11-25 13:02:50,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 08:03:23] 2025-11-25 13:02:50,950 | INFO     | ***************************************
[2025-11-25 08:03:23] 2025-11-25 13:02:50,950 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 08:03:23] 2025-11-25 13:02:50,951 | INFO     | ***************************************
[2025-11-25 08:03:23] 2025-11-25 13:02:50,951 | INFO     | 
[2025-11-25 08:03:23] 2025-11-25 13:02:50,951 | INFO     | architecture information:
[2025-11-25 08:03:23] 2025-11-25 13:02:50,952 | INFO     | executing command: cat /etc/os-release
[2025-11-25 08:03:23] 2025-11-25 13:02:50,967 | INFO     | cat /etc/os-release:
[2025-11-25 08:03:23] NAME="CentOS Linux"
[2025-11-25 08:03:23] VERSION="7 (Core)"
[2025-11-25 08:03:23] ID="centos"
[2025-11-25 08:03:23] ID_LIKE="rhel fedora"
[2025-11-25 08:03:23] VERSION_ID="7"
[2025-11-25 08:03:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 08:03:23] ANSI_COLOR="0;31"
[2025-11-25 08:03:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 08:03:23] HOME_URL="https://www.centos.org/"
[2025-11-25 08:03:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 08:03:23] 
[2025-11-25 08:03:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 08:03:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 08:03:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 08:03:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 08:03:23] 
[2025-11-25 08:03:23] 2025-11-25 13:02:50,968 | INFO     | ***************************************
[2025-11-25 08:03:23] 2025-11-25 13:02:51,470 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 08:03:23] 2025-11-25 13:02:51,486 | INFO     | sufficient remaining disk space (28243394560 B)
[2025-11-25 08:03:23] 2025-11-25 13:02:51,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 08:03:23] 2025-11-25 13:02:51,487 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 08:03:23] 2025-11-25 13:02:51,487 | INFO     | update_server=False
[2025-11-25 08:03:23] 2025-11-25 13:02:51,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 08:03:23] 2025-11-25 13:02:51,488 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:03:23] 2025-11-25 13:02:51,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 08:03:23] 2025-11-25 13:02:51,520 | INFO     | all data control threads have been joined
[2025-11-25 08:03:23] 2025-11-25 13:02:51,669 | INFO     | all payload control threads have been joined
[2025-11-25 08:03:23] 2025-11-25 13:02:51,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 08:03:23] 2025-11-25 13:02:51,819 | INFO     | all job control threads have been joined
[2025-11-25 08:03:23] 2025-11-25 13:02:52,266 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 08:03:23] 2025-11-25 13:02:52,266 | INFO     | aborting loop
[2025-11-25 08:03:23] 2025-11-25 13:02:52,491 | INFO     | [job] queue monitor thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:52,492 | INFO     | [job] retrieve thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:52,522 | INFO     | [data] control thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:52,529 | INFO     | [payload] validate_post thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:52,674 | INFO     | [payload] control thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:52,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:52,823 | INFO     | [job] control thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:52,834 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:53,237 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:53,272 | INFO     | [job] job monitor thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:53,414 | INFO     | [job] validate thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:53,458 | INFO     | [payload] failed_post thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:53,639 | INFO     | [data] copytool_in thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:53,705 | INFO     | [data] copytool_out thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:53,967 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:02:55,490 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 08:03:23] 2025-11-25 13:03:16,845 | INFO     | [monitor] cgroup control has ended
[2025-11-25 08:03:23] 2025-11-25 13:03:17,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818781062976)>', '<ExcThread(monitor, started 139818314995456)>']
[2025-11-25 08:03:23] 2025-11-25 13:03:21,169 | INFO     | PID=28494 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 08:03:23] 2025-11-25 13:03:21,169 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 08:03:23] 2025-11-25 13:03:21,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 08:03:23] 2025-11-25 13:03:21,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 08:03:23] 2025-11-25 13:03:21,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 08:03:23] 2025-11-25 13:03:21,169 | INFO     | [monitor] control thread has ended
[2025-11-25 08:03:23] 2025-11-25 13:03:22,786 | INFO     | all workflow threads have been joined
[2025-11-25 08:03:23] 2025-11-25 13:03:22,786 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 08:03:23] 2025-11-25 13:03:22,786 | INFO     | traces error code: 0
[2025-11-25 08:03:23] 2025-11-25 13:03:22,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 08:03:23] 2025-11-25 13:03:22,872 [wrapper] ==== pilot stdout END ====
[2025-11-25 08:03:23] 2025-11-25 13:03:22,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 08:03:23] 2025-11-25 13:03:22,880 [wrapper] pilotpid: 28494
[2025-11-25 08:03:23] 2025-11-25 13:03:22,884 [wrapper] Pilot exit status: 0
[2025-11-25 08:03:23] 2025-11-25 13:03:22,898 [wrapper] pandaids: 6895357335
[2025-11-25 08:03:23] 2025-11-25 13:03:22,940 [wrapper] cleanup supervisor_pilot 19154 28495
[2025-11-25 08:03:23] 2025-11-25 13:03:22,944 [wrapper] Test setup, not cleaning
[2025-11-25 08:03:23] 2025-11-25 13:03:22,948 [wrapper] apfmon messages muted
[2025-11-25 08:03:23] 2025-11-25 13:03:22,951 [wrapper] ==== wrapper stdout END ====
[2025-11-25 08:03:23] 2025-11-25 13:03:22,955 [wrapper] ==== wrapper stderr END ====
[2025-11-25 08:03:23]  *** Error codes and diagnostics ***
[2025-11-25 08:03:23]     "exeErrorCode": 0,
[2025-11-25 08:03:23]     "exeErrorDiag": "",
[2025-11-25 08:03:23]     "pilotErrorCode": 0,
[2025-11-25 08:03:23]     "pilotErrorDiag": "",
[2025-11-25 08:03:23]  *** Listing of results directory ***
[2025-11-25 08:03:23] total 1315332
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 06:44 pilot3.tar.gz
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 06:56 queuedata.json
[2025-11-25 08:03:23] -rwx------ 1 boincer umatlas     36292 Nov 23 06:57 runpilot2-wrapper.sh
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas       100 Nov 25 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 08:03:23] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 00:51 run_atlas
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas       105 Nov 25 00:51 job.xml
[2025-11-25 08:03:23] -rw-r--r-- 2 boincer umatlas 409087838 Nov 25 00:51 EVNT.47483658._000720.pool.root.1
[2025-11-25 08:03:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 00:51 start_atlas.sh
[2025-11-25 08:03:23] drwxrwx--x 2 boincer umatlas      4096 Nov 25 00:51 shared
[2025-11-25 08:03:23] -rw-r--r-- 2 boincer umatlas    590099 Nov 25 00:51 input.tar.gz
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas         0 Nov 25 00:51 boinc_lockfile
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas      2786 Nov 25 00:51 pandaJob.out
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas        57 Nov 25 00:51 setup.sh.local
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas    991801 Nov 25 00:51 agis_schedconf.cvmfs.json
[2025-11-25 08:03:23] drwx------ 5 boincer umatlas      4096 Nov 25 00:51 pilot3
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas       532 Nov 25 07:53 boinc_task_state.xml
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas      5955 Nov 25 07:54 init_data.xml
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas 922318562 Nov 25 08:02 HITS.47556137._007157.pool.root.1
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas      1061 Nov 25 08:02 memory_monitor_summary.json
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas        95 Nov 25 08:02 pilot_heartbeat.json
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas   1516240 Nov 25 08:02 agis_ddmendpoints.agis.ALL.json
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas   2167976 Nov 25 08:02 log.47556137._007157.job.log.tgz.1
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas      8661 Nov 25 08:02 heartbeat.json
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 08:03 boinc_mmap_file
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas        29 Nov 25 08:03 wrapper_checkpoint.txt
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas      4746 Nov 25 08:03 pilotlog.txt
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas   3617521 Nov 25 08:03 log.47556137._007157.job.log.1
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas       353 Nov 25 08:03 output.list
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas       620 Nov 25 08:03 runtime_log
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas   5806080 Nov 25 08:03 result.tar.gz
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas      9345 Nov 25 08:03 runtime_log.err
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas       670 Nov 25 08:03 7gkNDmytNh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyrKKDm4eqfIm.diag
[2025-11-25 08:03:23] -rw-r--r-- 1 boincer umatlas     21346 Nov 25 08:03 stderr.txt
[2025-11-25 08:03:23] HITS file was successfully produced:
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas 922318562 Nov 25 08:02 shared/HITS.pool.root.1
[2025-11-25 08:03:23]  *** Contents of shared directory: ***
[2025-11-25 08:03:23] total 1306476
[2025-11-25 08:03:23] -rw-r--r-- 2 boincer umatlas 409087838 Nov 25 00:51 ATLAS.root_0
[2025-11-25 08:03:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 00:51 start_atlas.sh
[2025-11-25 08:03:23] -rw-r--r-- 2 boincer umatlas    590099 Nov 25 00:51 input.tar.gz
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas 922318562 Nov 25 08:02 HITS.pool.root.1
[2025-11-25 08:03:23] -rw------- 1 boincer umatlas   5806080 Nov 25 08:03 result.tar.gz
08:03:24 (24807): run_atlas exited; CPU time 290103.541130
08:03:24 (24807): called boinc_finish(0)

</stderr_txt>
]]>

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