Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:50:23 (16321): wrapper (7.7.26015): starting
00:50:23 (16321): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:50:23] Arguments: --nthreads 8
[2025-11-25 00:50:23] Threads: 8
[2025-11-25 00:50:23] Checking for CVMFS
[2025-11-25 00:50:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:50:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:50:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:50:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:50:23] 2.11.2.0 2822 71461 85660 153272 2 82 17056654 20275200 1 130560 0 20105019 99.867 4173792 31780 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:50:23] CVMFS is ok
[2025-11-25 00:50:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:50:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:50:23] Further information can be found at the LHC@home message board.
[2025-11-25 00:50:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:50:23] Checking for apptainer binary...
[2025-11-25 00:50:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:50:23] Running /usr/bin/apptainer --version
[2025-11-25 00:50:23] apptainer version 1.3.2-1.el7
[2025-11-25 00:50:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:50:25] c-204-37.aglt2.org
[2025-11-25 00:50:25] apptainer works
[2025-11-25 00:50:25] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:50:25] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:50:25] Starting ATLAS job with PandaID=6895358129
[2025-11-25 00:50:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:29:05]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:29:05] 2025-11-25 18:28:25,564 | INFO     | monitor loop #3304: job 0:6895358129 is in state 'finished'
[2025-11-25 13:29:05] 2025-11-25 18:28:25,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 13:29:05] 2025-11-25 18:28:26,684 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 13:29:05] 2025-11-25 18:28:26,690 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1662.5
[2025-11-25 13:29:05] 2025-11-25 18:28:26,693 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895358129/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 13:29:05] 2025-11-25 18:28:26,694 | INFO     | extracted standard info from prmon json
[2025-11-25 13:29:05] 2025-11-25 18:28:26,694 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:29:05] 2025-11-25 18:28:26,694 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:29:05] 2025-11-25 18:28:26,709 | INFO     | fitting pss+swap vs Time
[2025-11-25 13:29:05] 2025-11-25 18:28:26,709 | INFO     | sum of square deviations: 128217811785.40192
[2025-11-25 13:29:05] 2025-11-25 18:28:26,721 | INFO     | sum of deviations: 841523212618.9618
[2025-11-25 13:29:05] 2025-11-25 18:28:26,721 | INFO     | mean x: 1764072569.6590605
[2025-11-25 13:29:05] 2025-11-25 18:28:26,721 | INFO     | mean y: 2874148.4053691276
[2025-11-25 13:29:05] 2025-11-25 18:28:26,722 | INFO     | intersect: -11575142941.740423
[2025-11-25 13:29:05] 2025-11-25 18:28:26,722 | INFO     | chi2: 5.731757648937447
[2025-11-25 13:29:05] 2025-11-25 18:28:26,723 | INFO     | sum of square deviations: 125653690203.21475
[2025-11-25 13:29:05] 2025-11-25 18:28:26,734 | INFO     | sum of deviations: 1065497321307.0913
[2025-11-25 13:29:05] 2025-11-25 18:28:26,735 | INFO     | mean x: 1764072417.1635134
[2025-11-25 13:29:05] 2025-11-25 18:28:26,735 | INFO     | mean y: 2887457.6108108107
[2025-11-25 13:29:05] 2025-11-25 18:28:26,735 | INFO     | intersect: -14955801237.003912
[2025-11-25 13:29:05] 2025-11-25 18:28:26,736 | INFO     | chi2: 3.07805279281151
[2025-11-25 13:29:05] 2025-11-25 18:28:26,736 | INFO     | current chi2=3.07805279281151 (change=46.29827390936323 %)
[2025-11-25 13:29:05] 2025-11-25 18:28:26,737 | INFO     | sum of square deviations: 123123987870.99844
[2025-11-25 13:29:05] 2025-11-25 18:28:26,749 | INFO     | sum of deviations: 1160899119640.6804
[2025-11-25 13:29:05] 2025-11-25 18:28:26,749 | INFO     | mean x: 1764072264.6680272
[2025-11-25 13:29:05] 2025-11-25 18:28:26,749 | INFO     | mean y: 2893202.6544217686
[2025-11-25 13:29:05] 2025-11-25 18:28:26,749 | INFO     | intersect: -16630014603.916344
[2025-11-25 13:29:05] 2025-11-25 18:28:26,750 | INFO     | chi2: 2.478498916313755
[2025-11-25 13:29:05] 2025-11-25 18:28:26,750 | INFO     | current chi2=2.478498916313755 (change=19.47834936093214 %)
[2025-11-25 13:29:05] 2025-11-25 18:28:26,750 | INFO     | right removable region: 734
[2025-11-25 13:29:05] 2025-11-25 18:28:26,751 | INFO     | sum of square deviations: 125653390693.21475
[2025-11-25 13:29:05] 2025-11-25 18:28:26,763 | INFO     | sum of deviations: 637544639462.4323
[2025-11-25 13:29:05] 2025-11-25 18:28:26,764 | INFO     | mean x: 1764072722.1635134
[2025-11-25 13:29:05] 2025-11-25 18:28:26,764 | INFO     | mean y: 2886257.756756757
[2025-11-25 13:29:05] 2025-11-25 18:28:26,764 | INFO     | intersect: -8947728615.686375
[2025-11-25 13:29:05] 2025-11-25 18:28:26,765 | INFO     | chi2: 3.4356410644867035
[2025-11-25 13:29:05] 2025-11-25 18:28:26,765 | INFO     | current chi2=3.4356410644867035 (change=40.059554591886794 %)
[2025-11-25 13:29:05] 2025-11-25 18:28:26,766 | INFO     | sum of square deviations: 123123433869.3333
[2025-11-25 13:29:05] 2025-11-25 18:28:26,778 | INFO     | sum of deviations: 595995446069.6664
[2025-11-25 13:29:05] 2025-11-25 18:28:26,778 | INFO     | mean x: 1764072874.6666667
[2025-11-25 13:29:05] 2025-11-25 18:28:26,778 | INFO     | mean y: 2888760.8598639457
[2025-11-25 13:29:05] 2025-11-25 18:28:26,778 | INFO     | intersect: -8536341885.940905
[2025-11-25 13:29:05] 2025-11-25 18:28:26,779 | INFO     | chi2: 3.398623184435773
[2025-11-25 13:29:05] 2025-11-25 18:28:26,779 | INFO     | current chi2=3.398623184435773 (change=1.07746645694669 %)
[2025-11-25 13:29:05] 2025-11-25 18:28:26,779 | INFO     | left removable region: 20
[2025-11-25 13:29:05] 2025-11-25 18:28:26,780 | INFO     | sum of square deviations: 112868826066.33041
[2025-11-25 13:29:05] 2025-11-25 18:28:26,791 | INFO     | sum of deviations: 867341076103.7957
[2025-11-25 13:29:05] 2025-11-25 18:28:26,791 | INFO     | mean x: 1764072844.1820729
[2025-11-25 13:29:05] 2025-11-25 18:28:26,791 | INFO     | mean y: 2911416.12464986
[2025-11-25 13:29:05] 2025-11-25 18:28:26,792 | INFO     | intersect: -13553115454.387724
[2025-11-25 13:29:05] 2025-11-25 18:28:26,792 | INFO     | chi2: 0.11480925025649466
[2025-11-25 13:29:05] 2025-11-25 18:28:26,792 | INFO     | current memory leak: 7.68 B/s (using 714 data points, chi2=0.11)
[2025-11-25 13:29:05] 2025-11-25 18:28:26,793 | INFO     | could have reported an average CPU frequency of 2182 MHz (28 samples)
[2025-11-25 13:29:05] 2025-11-25 18:28:26,793 | INFO     | correcting setup and stagein times since remote i/o verification was done
[2025-11-25 13:29:05] 2025-11-25 18:28:26,794 | INFO     | ..............................
[2025-11-25 13:29:05] 2025-11-25 18:28:26,794 | INFO     | . Timing measurements:
[2025-11-25 13:29:05] 2025-11-25 18:28:26,794 | INFO     | . get job = 0 s
[2025-11-25 13:29:05] 2025-11-25 18:28:26,794 | INFO     | . initial setup = 2 s
[2025-11-25 13:29:05] 2025-11-25 18:28:26,794 | INFO     | . payload setup = 8 s
[2025-11-25 13:29:05] 2025-11-25 18:28:26,794 | INFO     | . stage-in = 1 s
[2025-11-25 13:29:05] 2025-11-25 18:28:26,794 | INFO     | . payload execution = 45418 s
[2025-11-25 13:29:05] 2025-11-25 18:28:26,794 | INFO     | . stage-out = 3 s
[2025-11-25 13:29:05] 2025-11-25 18:28:26,794 | INFO     | . log creation = 0 s
[2025-11-25 13:29:05] 2025-11-25 18:28:26,795 | INFO     | ..............................
[2025-11-25 13:29:05] 2025-11-25 18:28:26,874 | INFO     | time since job start (45463s) is within the limit (172800.0s)
[2025-11-25 13:29:05] 2025-11-25 18:28:27,220 | INFO     | 
[2025-11-25 13:29:05] 2025-11-25 18:28:27,220 | INFO     | job summary report
[2025-11-25 13:29:05] 2025-11-25 18:28:27,220 | INFO     | --------------------------------------------------
[2025-11-25 13:29:05] 2025-11-25 18:28:27,221 | INFO     | PanDA job id: 6895358129
[2025-11-25 13:29:05] 2025-11-25 18:28:27,221 | INFO     | task id: 47556149
[2025-11-25 13:29:05] 2025-11-25 18:28:27,221 | INFO     | errors: (none)
[2025-11-25 13:29:05] 2025-11-25 18:28:27,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:29:05] 2025-11-25 18:28:27,221 | INFO     | pilot state: finished 
[2025-11-25 13:29:05] 2025-11-25 18:28:27,221 | INFO     | transexitcode: 0
[2025-11-25 13:29:05] 2025-11-25 18:28:27,222 | INFO     | exeerrorcode: 0
[2025-11-25 13:29:05] 2025-11-25 18:28:27,222 | INFO     | exeerrordiag: 
[2025-11-25 13:29:05] 2025-11-25 18:28:27,222 | INFO     | exitcode: 0
[2025-11-25 13:29:05] 2025-11-25 18:28:27,222 | INFO     | exitmsg: OK
[2025-11-25 13:29:05] 2025-11-25 18:28:27,222 | INFO     | cpuconsumptiontime: 353088 s
[2025-11-25 13:29:05] 2025-11-25 18:28:27,222 | INFO     | nevents: 1000
[2025-11-25 13:29:05] 2025-11-25 18:28:27,223 | INFO     | neventsw: 0
[2025-11-25 13:29:05] 2025-11-25 18:28:27,223 | INFO     | pid: 26418
[2025-11-25 13:29:05] 2025-11-25 18:28:27,223 | INFO     | pgrp: 26418
[2025-11-25 13:29:05] 2025-11-25 18:28:27,223 | INFO     | corecount: 8
[2025-11-25 13:29:05] 2025-11-25 18:28:27,223 | INFO     | event service: False
[2025-11-25 13:29:05] 2025-11-25 18:28:27,224 | INFO     | sizes: {0: 2284037, 1: 2284236, 7: 2284498, 11: 2284526, 45432: 2330508, 45437: 2339507, 45440: 2339691, 45446: 2339937}
[2025-11-25 13:29:05] 2025-11-25 18:28:27,224 | INFO     | --------------------------------------------------
[2025-11-25 13:29:05] 2025-11-25 18:28:27,224 | INFO     | 
[2025-11-25 13:29:05] 2025-11-25 18:28:27,224 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 13:29:05] 2025-11-25 18:28:27,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:29:05] 2025-11-25 18:28:27,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,256 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:29:05] 2025-11-25 18:28:27,257 | INFO     | job 6895358129 has completed (purged errors)
[2025-11-25 13:29:05] 2025-11-25 18:28:27,257 | INFO     | overall cleanup function is called
[2025-11-25 13:29:05] 2025-11-25 18:28:28,272 | INFO     | --- collectZombieJob: --- 10, [26418]
[2025-11-25 13:29:05] 2025-11-25 18:28:28,273 | INFO     | zombie collector waiting for pid 26418
[2025-11-25 13:29:05] 2025-11-25 18:28:28,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:29:05] 2025-11-25 18:28:28,273 | INFO     | collected zombie processes
[2025-11-25 13:29:05] 2025-11-25 18:28:28,273 | INFO     | will attempt to kill all subprocesses of pid=26418
[2025-11-25 13:29:05] 2025-11-25 18:28:28,364 | INFO     | process IDs to be killed: [26418] (in reverse order)
[2025-11-25 13:29:05] 2025-11-25 18:28:28,424 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:29:05] 2025-11-25 18:28:28,424 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:29:05] 2025-11-25 18:28:28,428 | INFO     | did not find any defunct processes belonging to 26418
[2025-11-25 13:29:05] 2025-11-25 18:28:28,431 | INFO     | did not find any defunct processes belonging to 26418
[2025-11-25 13:29:05] 2025-11-25 18:28:28,434 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:29:05] 2025-11-25 18:28:28,434 | INFO     | ready for new job
[2025-11-25 13:29:05] 2025-11-25 18:28:28,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:29:05] 2025-11-25 18:28:28,438 | INFO     | ***************************************
[2025-11-25 13:29:05] 2025-11-25 18:28:28,438 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:29:05] 2025-11-25 18:28:28,439 | INFO     | ***************************************
[2025-11-25 13:29:05] 2025-11-25 18:28:28,439 | INFO     | 
[2025-11-25 13:29:05] 2025-11-25 18:28:28,439 | INFO     | architecture information:
[2025-11-25 13:29:05] 2025-11-25 18:28:28,440 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:29:05] 2025-11-25 18:28:28,459 | INFO     | cat /etc/os-release:
[2025-11-25 13:29:05] NAME="CentOS Linux"
[2025-11-25 13:29:05] VERSION="7 (Core)"
[2025-11-25 13:29:05] ID="centos"
[2025-11-25 13:29:05] ID_LIKE="rhel fedora"
[2025-11-25 13:29:05] VERSION_ID="7"
[2025-11-25 13:29:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:29:05] ANSI_COLOR="0;31"
[2025-11-25 13:29:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:29:05] HOME_URL="https://www.centos.org/"
[2025-11-25 13:29:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:29:05] 
[2025-11-25 13:29:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:29:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:29:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:29:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:29:05] 
[2025-11-25 13:29:05] 2025-11-25 18:28:28,459 | INFO     | ***************************************
[2025-11-25 13:29:05] 2025-11-25 18:28:28,962 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 13:29:05] 2025-11-25 18:28:28,983 | INFO     | sufficient remaining disk space (17431527424 B)
[2025-11-25 13:29:05] 2025-11-25 18:28:28,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:29:05] 2025-11-25 18:28:28,984 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:29:05] 2025-11-25 18:28:28,984 | INFO     | update_server=False
[2025-11-25 13:29:05] 2025-11-25 18:28:28,985 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:29:05] 2025-11-25 18:28:29,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:29:05] 2025-11-25 18:28:29,073 | INFO     | aborting loop
[2025-11-25 13:29:05] 2025-11-25 18:28:29,099 | INFO     | all data control threads have been joined
[2025-11-25 13:29:05] 2025-11-25 18:28:29,152 | INFO     | all job control threads have been joined
[2025-11-25 13:29:05] 2025-11-25 18:28:29,169 | INFO     | all payload control threads have been joined
[2025-11-25 13:29:05] 2025-11-25 18:28:29,990 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:30,079 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:30,104 | INFO     | [data] control thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:30,158 | INFO     | [job] control thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:30,174 | INFO     | [payload] control thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:30,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:29:05] 2025-11-25 18:28:30,583 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:30,655 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:30,678 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:30,900 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:31,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:29:05] 2025-11-25 18:28:31,180 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:31,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:31,441 | INFO     | [job] validate thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:31,461 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:31,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:29:05] 2025-11-25 18:28:32,474 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:32,901 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:35,026 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:29:05] 2025-11-25 18:28:58,641 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:29:05] 2025-11-25 18:28:59,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501733300032)>', '<ExcThread(monitor, started 140500812142336)>']
[2025-11-25 13:29:05] 2025-11-25 18:29:00,094 | INFO     | PID=19999 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 13:29:05] 2025-11-25 18:29:00,095 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:29:05] 2025-11-25 18:29:00,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:29:05] 2025-11-25 18:29:00,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:29:05] 2025-11-25 18:29:00,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:29:05] 2025-11-25 18:29:00,095 | INFO     | [monitor] control thread has ended
[2025-11-25 13:29:05] 2025-11-25 18:29:05,011 | INFO     | all workflow threads have been joined
[2025-11-25 13:29:05] 2025-11-25 18:29:05,011 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:29:05] 2025-11-25 18:29:05,012 | INFO     | traces error code: 0
[2025-11-25 13:29:05] 2025-11-25 18:29:05,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:29:05] 2025-11-25 18:29:05,130 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:29:05] 2025-11-25 18:29:05,135 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:29:05] 2025-11-25 18:29:05,140 [wrapper] pilotpid: 19999
[2025-11-25 13:29:05] 2025-11-25 18:29:05,145 [wrapper] Pilot exit status: 0
[2025-11-25 13:29:05] 2025-11-25 18:29:05,163 [wrapper] pandaids: 6895358129
[2025-11-25 13:29:05] 2025-11-25 18:29:05,211 [wrapper] cleanup supervisor_pilot  7617 20000
[2025-11-25 13:29:05] 2025-11-25 18:29:05,216 [wrapper] Test setup, not cleaning
[2025-11-25 13:29:05] 2025-11-25 18:29:05,220 [wrapper] apfmon messages muted
[2025-11-25 13:29:05] 2025-11-25 18:29:05,225 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:29:05] 2025-11-25 18:29:05,230 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:29:05]  *** Error codes and diagnostics ***
[2025-11-25 13:29:05]     "exeErrorCode": 0,
[2025-11-25 13:29:05]     "exeErrorDiag": "",
[2025-11-25 13:29:05]     "pilotErrorCode": 0,
[2025-11-25 13:29:05]     "pilotErrorDiag": "",
[2025-11-25 13:29:05]  *** Listing of results directory ***
[2025-11-25 13:29:05] total 1318044
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 07:14 pilot3.tar.gz
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 07:21 queuedata.json
[2025-11-25 13:29:05] -rwx------ 1 boincer umatlas     36292 Nov 23 07:22 runpilot2-wrapper.sh
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas       100 Nov 25 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:29:05] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 00:50 run_atlas
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas       105 Nov 25 00:50 job.xml
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas 407493585 Nov 25 00:50 EVNT.47483658._001161.pool.root.1
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 00:50 start_atlas.sh
[2025-11-25 13:29:05] drwxrwx--x 2 boincer umatlas      4096 Nov 25 00:50 shared
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 00:50 input.tar.gz
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas         0 Nov 25 00:50 boinc_lockfile
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 00:50 pandaJob.out
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas        57 Nov 25 00:50 setup.sh.local
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas    991801 Nov 25 00:50 agis_schedconf.cvmfs.json
[2025-11-25 13:29:05] drwx------ 5 boincer umatlas      4096 Nov 25 00:50 pilot3
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas       532 Nov 25 13:17 boinc_task_state.xml
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 13:20 init_data.xml
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas 921877917 Nov 25 13:27 HITS.47556149._001472.pool.root.1
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas      1076 Nov 25 13:28 memory_monitor_summary.json
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   1516240 Nov 25 13:28 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   1989452 Nov 25 13:28 log.47556149._001472.job.log.tgz.1
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas      8672 Nov 25 13:28 heartbeat.json
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 13:28 boinc_mmap_file
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas        29 Nov 25 13:28 wrapper_checkpoint.txt
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas        95 Nov 25 13:29 pilot_heartbeat.json
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas      4746 Nov 25 13:29 pilotlog.txt
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   6201770 Nov 25 13:29 log.47556149._001472.job.log.1
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas       353 Nov 25 13:29 output.list
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas       620 Nov 25 13:29 runtime_log
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   8212480 Nov 25 13:29 result.tar.gz
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 13:29 runtime_log.err
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas       668 Nov 25 13:29 0ZYMDm3HOh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLtKKDmyXFEOo.diag
[2025-11-25 13:29:05] -rw-r--r-- 1 boincer umatlas     21324 Nov 25 13:29 stderr.txt
[2025-11-25 13:29:05] HITS file was successfully produced:
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas 921877917 Nov 25 13:27 shared/HITS.pool.root.1
[2025-11-25 13:29:05]  *** Contents of shared directory: ***
[2025-11-25 13:29:05] total 1306840
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas 407493585 Nov 25 00:50 ATLAS.root_0
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 00:50 start_atlas.sh
[2025-11-25 13:29:05] -rw-r--r-- 2 boincer umatlas    590101 Nov 25 00:50 input.tar.gz
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas 921877917 Nov 25 13:27 HITS.pool.root.1
[2025-11-25 13:29:05] -rw------- 1 boincer umatlas   8212480 Nov 25 13:29 result.tar.gz
13:29:07 (16321): run_atlas exited; CPU time 350126.790938
13:29:07 (16321): called boinc_finish(0)

</stderr_txt>
]]>

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