Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:30:51 (17967): wrapper (7.7.26015): starting
00:30:51 (17967): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:30:51] Arguments: --nthreads 8
[2025-11-25 00:30:51] Threads: 8
[2025-11-25 00:30:51] Checking for CVMFS
[2025-11-25 00:30:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:30:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:30:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:30:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:30:51] 2.11.2.0 2830 55299 80296 153272 3 82 17985115 20275200 1 130560 0 11222969 99.736 3773913 27749 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:30:51] CVMFS is ok
[2025-11-25 00:30:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:30:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:30:51] Further information can be found at the LHC@home message board.
[2025-11-25 00:30:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:30:51] Checking for apptainer binary...
[2025-11-25 00:30:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:30:51] Running /usr/bin/apptainer --version
[2025-11-25 00:30:51] apptainer version 1.3.2-1.el7
[2025-11-25 00:30:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:30:53] c-204-15.aglt2.org
[2025-11-25 00:30:53] apptainer works
[2025-11-25 00:30:53] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:30:53] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:30:53] Starting ATLAS job with PandaID=6896045314
[2025-11-25 00:30:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
03:11:41 (23935): wrapper (7.7.26015): starting
03:11:41 (23935): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 03:11:41] Arguments: --nthreads 8
[2025-11-25 03:11:41] Threads: 8
[2025-11-25 03:11:41] This job has been restarted, cleaning up previous attempt
[2025-11-25 03:11:41] Checking for CVMFS
[2025-11-25 03:11:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 03:11:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 03:11:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 03:11:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 03:11:41] 2.11.2.0 2830 55459 82276 153275 2 57 18195313 20275200 1 130560 0 11320022 99.738 3780407 27759 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 03:11:41] CVMFS is ok
[2025-11-25 03:11:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 03:11:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 03:11:41] Further information can be found at the LHC@home message board.
[2025-11-25 03:11:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 03:11:41] Checking for apptainer binary...
[2025-11-25 03:11:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 03:11:41] Running /usr/bin/apptainer --version
[2025-11-25 03:11:42] apptainer version 1.3.2-1.el7
[2025-11-25 03:11:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 03:11:43] c-204-15.aglt2.org
[2025-11-25 03:11:43] apptainer works
[2025-11-25 03:11:43] Set ATHENA_PROC_NUMBER=8
[2025-11-25 03:11:43] Set ATHENA_CORE_NUMBER=8
[2025-11-25 03:11:43] Starting ATLAS job with PandaID=6896045314
[2025-11-25 03:11:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:46:20]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:46:20] 2025-11-25 20:45:12,672 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:46:20] 2025-11-25 20:45:12,672 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:46:20] 2025-11-25 20:45:12,686 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:46:20] 2025-11-25 20:45:12,687 | INFO     | sum of square deviations: 126163373638.19652
[2025-11-25 15:46:20] 2025-11-25 20:45:12,698 | INFO     | sum of deviations: 659097677041.7327
[2025-11-25 15:46:20] 2025-11-25 20:45:12,698 | INFO     | mean x: 1764080922.6221323
[2025-11-25 15:46:20] 2025-11-25 20:45:12,698 | INFO     | mean y: 3270981.991902834
[2025-11-25 15:46:20] 2025-11-25 20:45:12,698 | INFO     | intersect: -9212570388.485455
[2025-11-25 15:46:20] 2025-11-25 20:45:12,699 | INFO     | chi2: 7.217033148765002
[2025-11-25 15:46:20] 2025-11-25 20:45:12,700 | INFO     | sum of square deviations: 123626796911.24872
[2025-11-25 15:46:20] 2025-11-25 20:45:12,711 | INFO     | sum of deviations: 967024266390.9901
[2025-11-25 15:46:20] 2025-11-25 20:45:12,711 | INFO     | mean x: 1764080770.1263587
[2025-11-25 15:46:20] 2025-11-25 20:45:12,711 | INFO     | mean y: 3289496.0108695654
[2025-11-25 15:46:20] 2025-11-25 20:45:12,712 | INFO     | intersect: -13795570906.48392
[2025-11-25 15:46:20] 2025-11-25 20:45:12,712 | INFO     | chi2: 3.558147848124936
[2025-11-25 15:46:20] 2025-11-25 20:45:12,712 | INFO     | current chi2=3.558147848124936 (change=50.69791457541225 %)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,713 | INFO     | sum of square deviations: 121124453384.27316
[2025-11-25 15:46:20] 2025-11-25 20:45:12,724 | INFO     | sum of deviations: 1117561143127.3562
[2025-11-25 15:46:20] 2025-11-25 20:45:12,724 | INFO     | mean x: 1764080617.630643
[2025-11-25 15:46:20] 2025-11-25 20:45:12,725 | INFO     | mean y: 3298665.6716826265
[2025-11-25 15:46:20] 2025-11-25 20:45:12,725 | INFO     | intersect: -16273083984.77081
[2025-11-25 15:46:20] 2025-11-25 20:45:12,726 | INFO     | chi2: 2.5804675278030498
[2025-11-25 15:46:20] 2025-11-25 20:45:12,726 | INFO     | current chi2=2.5804675278030498 (change=27.47722585044075 %)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,726 | INFO     | sum of square deviations: 118656021679.30586
[2025-11-25 15:46:20] 2025-11-25 20:45:12,737 | INFO     | sum of deviations: 1127120096305.8943
[2025-11-25 15:46:20] 2025-11-25 20:45:12,738 | INFO     | mean x: 1764080465.1322315
[2025-11-25 15:46:20] 2025-11-25 20:45:12,738 | INFO     | mean y: 3299249.4490358126
[2025-11-25 15:46:20] 2025-11-25 20:45:12,738 | INFO     | intersect: -16753798414.966938
[2025-11-25 15:46:20] 2025-11-25 20:45:12,739 | INFO     | chi2: 2.516096551332746
[2025-11-25 15:46:20] 2025-11-25 20:45:12,739 | INFO     | current chi2=2.516096551332746 (change=2.494547045321975 %)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,739 | INFO     | right removable region: 725
[2025-11-25 15:46:20] 2025-11-25 20:45:12,740 | INFO     | sum of square deviations: 123626515701.24881
[2025-11-25 15:46:20] 2025-11-25 20:45:12,751 | INFO     | sum of deviations: 420773083101.8319
[2025-11-25 15:46:20] 2025-11-25 20:45:12,751 | INFO     | mean x: 1764081075.1263587
[2025-11-25 15:46:20] 2025-11-25 20:45:12,751 | INFO     | mean y: 3285287.6684782607
[2025-11-25 15:46:20] 2025-11-25 20:45:12,751 | INFO     | intersect: -6000910726.528614
[2025-11-25 15:46:20] 2025-11-25 20:45:12,752 | INFO     | chi2: 4.871589439364545
[2025-11-25 15:46:20] 2025-11-25 20:45:12,752 | INFO     | current chi2=4.871589439364545 (change=32.49872435187326 %)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,753 | INFO     | sum of square deviations: 121124070305.29698
[2025-11-25 15:46:20] 2025-11-25 20:45:12,764 | INFO     | sum of deviations: 368471470955.3643
[2025-11-25 15:46:20] 2025-11-25 20:45:12,764 | INFO     | mean x: 1764081227.625171
[2025-11-25 15:46:20] 2025-11-25 20:45:12,764 | INFO     | mean y: 3288473.0889192885
[2025-11-25 15:46:20] 2025-11-25 20:45:12,765 | INFO     | intersect: -5363222107.255781
[2025-11-25 15:46:20] 2025-11-25 20:45:12,765 | INFO     | chi2: 4.80824778358391
[2025-11-25 15:46:20] 2025-11-25 20:45:12,765 | INFO     | current chi2=4.80824778358391 (change=1.3002256567190709 %)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,766 | INFO     | left removable region: 20
[2025-11-25 15:46:20] 2025-11-25 20:45:12,766 | INFO     | sum of square deviations: 108654207516.76607
[2025-11-25 15:46:20] 2025-11-25 20:45:12,777 | INFO     | sum of deviations: 769403843348.2563
[2025-11-25 15:46:20] 2025-11-25 20:45:12,777 | INFO     | mean x: 1764081044.6382978
[2025-11-25 15:46:20] 2025-11-25 20:45:12,777 | INFO     | mean y: 3321513.879432624
[2025-11-25 15:46:20] 2025-11-25 20:45:12,777 | INFO     | intersect: -12488516278.164417
[2025-11-25 15:46:20] 2025-11-25 20:45:12,778 | INFO     | chi2: 0.05112556635755917
[2025-11-25 15:46:20] 2025-11-25 20:45:12,778 | INFO     | current memory leak: 7.08 B/s (using 705 data points, chi2=0.05)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,779 | INFO     | could have reported an average CPU frequency of 2174 MHz (28 samples)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,779 | INFO     | ..............................
[2025-11-25 15:46:20] 2025-11-25 20:45:12,779 | INFO     | . Timing measurements:
[2025-11-25 15:46:20] 2025-11-25 20:45:12,779 | INFO     | . get job = 0 s
[2025-11-25 15:46:20] 2025-11-25 20:45:12,779 | INFO     | . initial setup = 1 s
[2025-11-25 15:46:20] 2025-11-25 20:45:12,779 | INFO     | . payload setup = 8 s
[2025-11-25 15:46:20] 2025-11-25 20:45:12,779 | INFO     | . stage-in = 0 s
[2025-11-25 15:46:20] 2025-11-25 20:45:12,779 | INFO     | . payload execution = 45151 s
[2025-11-25 15:46:20] 2025-11-25 20:45:12,780 | INFO     | . stage-out = 3 s
[2025-11-25 15:46:20] 2025-11-25 20:45:12,780 | INFO     | . log creation = 0 s
[2025-11-25 15:46:20] 2025-11-25 20:45:12,780 | INFO     | ..............................
[2025-11-25 15:46:20] 2025-11-25 20:45:12,911 | INFO     | time since job start (45192s) is within the limit (172800.0s)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,918 | INFO     | 
[2025-11-25 15:46:20] 2025-11-25 20:45:12,918 | INFO     | job summary report
[2025-11-25 15:46:20] 2025-11-25 20:45:12,918 | INFO     | --------------------------------------------------
[2025-11-25 15:46:20] 2025-11-25 20:45:12,919 | INFO     | PanDA job id: 6896045314
[2025-11-25 15:46:20] 2025-11-25 20:45:12,919 | INFO     | task id: 47556185
[2025-11-25 15:46:20] 2025-11-25 20:45:12,919 | INFO     | errors: (none)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,919 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:46:20] 2025-11-25 20:45:12,919 | INFO     | pilot state: finished 
[2025-11-25 15:46:20] 2025-11-25 20:45:12,919 | INFO     | transexitcode: 0
[2025-11-25 15:46:20] 2025-11-25 20:45:12,920 | INFO     | exeerrorcode: 0
[2025-11-25 15:46:20] 2025-11-25 20:45:12,920 | INFO     | exeerrordiag: 
[2025-11-25 15:46:20] 2025-11-25 20:45:12,920 | INFO     | exitcode: 0
[2025-11-25 15:46:20] 2025-11-25 20:45:12,920 | INFO     | exitmsg: OK
[2025-11-25 15:46:20] 2025-11-25 20:45:12,920 | INFO     | cpuconsumptiontime: 349756 s
[2025-11-25 15:46:20] 2025-11-25 20:45:12,920 | INFO     | nevents: 1000
[2025-11-25 15:46:20] 2025-11-25 20:45:12,920 | INFO     | neventsw: 0
[2025-11-25 15:46:20] 2025-11-25 20:45:12,921 | INFO     | pid: 1772
[2025-11-25 15:46:20] 2025-11-25 20:45:12,921 | INFO     | pgrp: 1772
[2025-11-25 15:46:20] 2025-11-25 20:45:12,921 | INFO     | corecount: 8
[2025-11-25 15:46:20] 2025-11-25 20:45:12,921 | INFO     | event service: False
[2025-11-25 15:46:20] 2025-11-25 20:45:12,921 | INFO     | sizes: {0: 2284079, 1: 2284334, 7: 2284596, 12: 2284624, 45164: 2330603, 45169: 2339786, 45176: 2339976}
[2025-11-25 15:46:20] 2025-11-25 20:45:12,921 | INFO     | --------------------------------------------------
[2025-11-25 15:46:20] 2025-11-25 20:45:12,921 | INFO     | 
[2025-11-25 15:46:20] 2025-11-25 20:45:12,921 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 15:46:20] 2025-11-25 20:45:12,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,950 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,953 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:46:20] 2025-11-25 20:45:12,954 | INFO     | job 6896045314 has completed (purged errors)
[2025-11-25 15:46:20] 2025-11-25 20:45:12,954 | INFO     | overall cleanup function is called
[2025-11-25 15:46:20] 2025-11-25 20:45:13,965 | INFO     | --- collectZombieJob: --- 10, [1772]
[2025-11-25 15:46:20] 2025-11-25 20:45:13,965 | INFO     | zombie collector waiting for pid 1772
[2025-11-25 15:46:20] 2025-11-25 20:45:13,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:46:20] 2025-11-25 20:45:13,966 | INFO     | collected zombie processes
[2025-11-25 15:46:20] 2025-11-25 20:45:13,966 | INFO     | will attempt to kill all subprocesses of pid=1772
[2025-11-25 15:46:20] 2025-11-25 20:45:14,055 | INFO     | process IDs to be killed: [1772] (in reverse order)
[2025-11-25 15:46:20] 2025-11-25 20:45:14,113 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:46:20] 2025-11-25 20:45:14,114 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:46:20] 2025-11-25 20:45:14,118 | INFO     | did not find any defunct processes belonging to 1772
[2025-11-25 15:46:20] 2025-11-25 20:45:14,122 | INFO     | did not find any defunct processes belonging to 1772
[2025-11-25 15:46:20] 2025-11-25 20:45:14,124 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:46:20] 2025-11-25 20:45:14,124 | INFO     | ready for new job
[2025-11-25 15:46:20] 2025-11-25 20:45:14,124 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:46:20] 2025-11-25 20:45:14,128 | INFO     | ***************************************
[2025-11-25 15:46:20] 2025-11-25 20:45:14,128 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:46:20] 2025-11-25 20:45:14,128 | INFO     | ***************************************
[2025-11-25 15:46:20] 2025-11-25 20:45:14,128 | INFO     | 
[2025-11-25 15:46:20] 2025-11-25 20:45:14,129 | INFO     | architecture information:
[2025-11-25 15:46:20] 2025-11-25 20:45:14,129 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:46:20] 2025-11-25 20:45:14,148 | INFO     | cat /etc/os-release:
[2025-11-25 15:46:20] NAME="CentOS Linux"
[2025-11-25 15:46:20] VERSION="7 (Core)"
[2025-11-25 15:46:20] ID="centos"
[2025-11-25 15:46:20] ID_LIKE="rhel fedora"
[2025-11-25 15:46:20] VERSION_ID="7"
[2025-11-25 15:46:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:46:20] ANSI_COLOR="0;31"
[2025-11-25 15:46:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:46:20] HOME_URL="https://www.centos.org/"
[2025-11-25 15:46:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:46:20] 
[2025-11-25 15:46:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:46:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:46:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:46:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:46:20] 
[2025-11-25 15:46:20] 2025-11-25 20:45:14,149 | INFO     | ***************************************
[2025-11-25 15:46:20] 2025-11-25 20:45:14,652 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 15:46:20] 2025-11-25 20:45:14,673 | INFO     | sufficient remaining disk space (17443061760 B)
[2025-11-25 15:46:20] 2025-11-25 20:45:14,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:46:20] 2025-11-25 20:45:14,674 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:46:20] 2025-11-25 20:45:14,674 | INFO     | update_server=False
[2025-11-25 15:46:20] 2025-11-25 20:45:14,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:46:20] 2025-11-25 20:45:14,674 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 15:46:20] 2025-11-25 20:45:14,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:20] 2025-11-25 20:45:14,675 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:46:20] 2025-11-25 20:45:14,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:46:20] 2025-11-25 20:45:14,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:46:20] 2025-11-25 20:45:14,792 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:20] 2025-11-25 20:45:14,792 | INFO     | aborting loop
[2025-11-25 15:46:20] 2025-11-25 20:45:14,979 | INFO     | all payload control threads have been joined
[2025-11-25 15:46:20] 2025-11-25 20:45:15,464 | INFO     | all data control threads have been joined
[2025-11-25 15:46:20] 2025-11-25 20:45:15,679 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:15,680 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:15,798 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:15,970 | INFO     | all job control threads have been joined
[2025-11-25 15:46:20] 2025-11-25 20:45:16,017 | INFO     | [payload] control thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:46:20] 2025-11-25 20:45:16,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:46:20] 2025-11-25 20:45:16,146 | INFO     | [job] validate thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,239 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,424 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,436 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,448 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,469 | INFO     | [data] control thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,714 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,834 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:16,975 | INFO     | [job] control thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:18,057 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:45:20,136 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:46:20] 2025-11-25 20:46:14,528 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:46:20] 2025-11-25 20:46:14,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140346453137216)>', '<ExcThread(monitor, started 140345857775360)>']
[2025-11-25 15:46:20] 2025-11-25 20:46:14,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:46:20] 2025-11-25 20:46:14,932 | INFO     | [monitor] control thread has ended
[2025-11-25 15:46:20] 2025-11-25 20:46:19,790 | INFO     | all workflow threads have been joined
[2025-11-25 15:46:20] 2025-11-25 20:46:19,791 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:46:20] 2025-11-25 20:46:19,793 | INFO     | traces error code: 0
[2025-11-25 15:46:20] 2025-11-25 20:46:19,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:46:20] 2025-11-25 20:46:19,924 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:46:20] 2025-11-25 20:46:19,929 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:46:20] 2025-11-25 20:46:19,934 [wrapper] pilotpid: 27642
[2025-11-25 15:46:20] 2025-11-25 20:46:19,939 [wrapper] Pilot exit status: 0
[2025-11-25 15:46:20] 2025-11-25 20:46:19,958 [wrapper] pandaids: 6896045314 6896045314
[2025-11-25 15:46:20] 2025-11-25 20:46:20,013 [wrapper] cleanup supervisor_pilot  6196 27643
[2025-11-25 15:46:20] 2025-11-25 20:46:20,018 [wrapper] Test setup, not cleaning
[2025-11-25 15:46:20] 2025-11-25 20:46:20,022 [wrapper] apfmon messages muted
[2025-11-25 15:46:20] 2025-11-25 20:46:20,026 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:46:20] 2025-11-25 20:46:20,031 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:46:20]  *** Error codes and diagnostics ***
[2025-11-25 15:46:20]     "exeErrorCode": 0,
[2025-11-25 15:46:20]     "exeErrorDiag": "",
[2025-11-25 15:46:20]     "pilotErrorCode": 0,
[2025-11-25 15:46:20]     "pilotErrorDiag": "",
[2025-11-25 15:46:20]  *** Listing of results directory ***
[2025-11-25 15:46:20] total 1737872
[2025-11-25 15:46:20] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 13:56 queuedata.json
[2025-11-25 15:46:20] -rwx------ 1 boincer umatlas     36292 Nov 24 13:58 runpilot2-wrapper.sh
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas       100 Nov 25 00:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:46:20] -rwxr-xr-x 1 boincer umatlas      7986 Nov 25 00:30 run_atlas
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas       105 Nov 25 00:30 job.xml
[2025-11-25 15:46:20] -rw-r--r-- 3 boincer umatlas 413000327 Nov 25 00:30 EVNT.47483658._004240.pool.root.1
[2025-11-25 15:46:20] -rw-r--r-- 3 boincer umatlas 413000327 Nov 25 00:30 ATLAS.root_0
[2025-11-25 15:46:20] drwxrwx--x 2 boincer umatlas      4096 Nov 25 00:30 shared
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 00:30 input.tar.gz
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 00:30 start_atlas.sh
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas         0 Nov 25 00:30 boinc_lockfile
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      2784 Nov 25 03:11 pandaJob.out
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas        57 Nov 25 03:11 setup.sh.local
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas    991830 Nov 25 03:11 agis_schedconf.cvmfs.json
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas       533 Nov 25 15:32 boinc_task_state.xml
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      5913 Nov 25 15:39 init_data.xml
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas        96 Nov 25 15:44 pilot_heartbeat.json
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas 933239567 Nov 25 15:44 HITS.47556185._000038.pool.root.1
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas      1062 Nov 25 15:44 memory_monitor_summary.json
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   1516240 Nov 25 15:45 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   1987975 Nov 25 15:45 log.47556185._000038.job.log.tgz.1
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas      8658 Nov 25 15:45 heartbeat.json
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas        29 Nov 25 15:46 wrapper_checkpoint.txt
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 15:46 boinc_mmap_file
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas      4552 Nov 25 15:46 pilotlog.txt
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   6216974 Nov 25 15:46 log.47556185._000038.job.log.1
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas       353 Nov 25 15:46 output.list
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas       620 Nov 25 15:46 runtime_log
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   8222720 Nov 25 15:46 result.tar.gz
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas      9428 Nov 25 15:46 runtime_log.err
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas       793 Nov 25 15:46 5tZNDmmwqh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGAJKDmmO4lLm.diag
[2025-11-25 15:46:20] -rw-r--r-- 1 boincer umatlas     23165 Nov 25 15:46 stderr.txt
[2025-11-25 15:46:20] HITS file was successfully produced:
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas 933239567 Nov 25 15:44 shared/HITS.pool.root.1
[2025-11-25 15:46:20]  *** Contents of shared directory: ***
[2025-11-25 15:46:20] total 1323328
[2025-11-25 15:46:20] -rw-r--r-- 3 boincer umatlas 413000327 Nov 25 00:30 ATLAS.root_0
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas    590104 Nov 25 00:30 input.tar.gz
[2025-11-25 15:46:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 25 00:30 start_atlas.sh
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas 933239567 Nov 25 15:44 HITS.pool.root.1
[2025-11-25 15:46:20] -rw------- 1 boincer umatlas   8222720 Nov 25 15:46 result.tar.gz
15:46:22 (23935): run_atlas exited; CPU time 347406.678420
15:46:22 (23935): called boinc_finish(0)

</stderr_txt>
]]>

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