Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:42:09 (3812405): wrapper (7.7.26015): starting
21:42:09 (3812405): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 21:42:09] Arguments: --nthreads 8
[2025-11-24 21:42:09] Threads: 8
[2025-11-24 21:42:09] Checking for CVMFS
[2025-11-24 21:42:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 21:42:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 21:42:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 21:42:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 21:42:10] 2.11.3.0 1855 92874 208212 153272 2 96 44656549 45568001 13820 130560 0 609774918 99.845 282340455 19910 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 21:42:10] CVMFS is ok
[2025-11-24 21:42:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 21:42:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 21:42:10] Further information can be found at the LHC@home message board.
[2025-11-24 21:42:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 21:42:10] Checking for apptainer binary...
[2025-11-24 21:42:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 21:42:10] Running /usr/bin/apptainer --version
[2025-11-24 21:42:10] apptainer version 1.4.1-1.el9
[2025-11-24 21:42:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 21:42:11] wns0009.triumf.lcg
[2025-11-24 21:42:11] apptainer works
[2025-11-24 21:42:11] Set ATHENA_PROC_NUMBER=8
[2025-11-24 21:42:11] Set ATHENA_CORE_NUMBER=8
[2025-11-24 21:42:11] Starting ATLAS job with PandaID=6896045264
[2025-11-24 21:42:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:50:07]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 21:50:07] 2025-11-25 05:49:34,419 | WARNING  | wrong length of table data, x=[1764049436.0, 1764049497.0, 1764049558.0, 1764049619.0], y=[1370.0, 540719.0, 848967.0, 609809.0] (must be same and length>=4)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | ..............................
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . Timing measurements:
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . get job = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . initial setup = 3 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . payload setup = 19 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . stage-in = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . payload execution = 223 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . stage-out = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . log creation = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,421 | INFO     | ..............................
[2025-11-24 21:50:07] 2025-11-25 05:49:34,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 21:50:07] 2025-11-25 05:49:34,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896045264/pilotlog.txt
[2025-11-24 21:50:07] 2025-11-25 05:49:34,470 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 21:50:07] - Log from pilotlog.txt -
[2025-11-24 21:50:07] 2025-11-25 05:49:34,417 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896045264/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | INFO     | extracted standard info from prmon json
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 21:50:07] 2025-11-25 05:49:34,419 | WARNING  | wrong length of table data, x=[1764049436.0, 1764049497.0, 1764049558.0, 1764049619.0], y=[1370.0, 540719.0, 848967.0, 609809.0] (must be same and length>=4)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | ..............................
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . Timing measurements:
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . get job = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . initial setup = 3 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . payload setup = 19 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . stage-in = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . payload execution = 223 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . stage-out = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . log creation = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,421 | INFO     | ..............................
[2025-11-24 21:50:07] 2025-11-25 05:49:34,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 21:50:07] 2025-11-25 05:49:34,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896045264/pilotlog.txt
[2025-11-24 21:50:07] 2025-11-25 05:49:34,470 | WARNING  | 
[2025-11-24 21:50:07] [begin log extracts]
[2025-11-24 21:50:07] - Log from pilotlog.txt -
[2025-11-24 21:50:07] 2025-11-25 05:49:34,417 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896045264/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | INFO     | extracted standard info from prmon json
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 21:50:07] 2025-11-25 05:49:34,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 21:50:07] 2025-11-25 05:49:34,419 | WARNING  | wrong length of table data, x=[1764049436.0, 1764049497.0, 1764049558.0, 1764049619.0], y=[1370.0, 540719.0, 848967.0, 609809.0] (must be same and length>=4)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | ..............................
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . Timing measurements:
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . get job = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . initial setup = 3 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . payload setup = 19 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . stage-in = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . payload execution = 223 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . stage-out = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,420 | INFO     | . log creation = 0 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,421 | INFO     | ..............................
[2025-11-24 21:50:07] 2025-11-25 05:49:34,421 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 21:50:07] 2025-11-25 05:49:34,421 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896045264/pilotlog.txt
[2025-11-24 21:50:07] [end log extracts]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,470 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,471 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 21:50:07] 2025-11-25 05:49:34,949 | INFO     | 
[2025-11-24 21:50:07] 2025-11-25 05:49:34,949 | INFO     | job summary report
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | --------------------------------------------------
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | PanDA job id: 6896045264
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | task id: 47556173
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 21:47:20,328 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | pilot state: failed 
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | transexitcode: 65
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | exeerrorcode: 65
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | exitcode: 65
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 21:50:07] 2025-11-25 05:49:34,950 | INFO     | cpuconsumptiontime: 54 s
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | nevents: 0
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | neventsw: 0
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | pid: 3822891
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | pgrp: 3822891
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | corecount: 8
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | event service: False
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | sizes: {0: 2283479, 1: 2284332, 12: 2284622, 23: 2284622, 247: 2310069, 250: 2314515, 373: 2314653}
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | --------------------------------------------------
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | 
[2025-11-24 21:50:07] 2025-11-25 05:49:34,951 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 21:50:07] 2025-11-25 05:49:34,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,986 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,986 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,988 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,988 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,988 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 21:50:07] 2025-11-25 05:49:34,988 | INFO     | job 6896045264 has completed (purged errors)
[2025-11-24 21:50:07] 2025-11-25 05:49:34,988 | INFO     | overall cleanup function is called
[2025-11-24 21:50:07] 2025-11-25 05:49:35,996 | INFO     | --- collectZombieJob: --- 10, [3822891]
[2025-11-24 21:50:07] 2025-11-25 05:49:35,996 | INFO     | zombie collector waiting for pid 3822891
[2025-11-24 21:50:07] 2025-11-25 05:49:35,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 21:50:07] 2025-11-25 05:49:35,997 | INFO     | collected zombie processes
[2025-11-24 21:50:07] 2025-11-25 05:49:35,997 | INFO     | will attempt to kill all subprocesses of pid=3822891
[2025-11-24 21:50:07] 2025-11-25 05:49:36,196 | INFO     | process IDs to be killed: [3822891] (in reverse order)
[2025-11-24 21:50:07] 2025-11-25 05:49:36,328 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 21:50:07] 2025-11-25 05:49:36,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 21:50:07] 2025-11-25 05:49:36,395 | INFO     | did not find any defunct processes belonging to 3822891
[2025-11-24 21:50:07] 2025-11-25 05:49:36,402 | INFO     | did not find any defunct processes belonging to 3822891
[2025-11-24 21:50:07] 2025-11-25 05:49:36,404 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 21:50:07] 2025-11-25 05:49:36,404 | INFO     | ready for new job
[2025-11-24 21:50:07] 2025-11-25 05:49:36,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 21:50:07] 2025-11-25 05:49:36,406 | INFO     | ***************************************
[2025-11-24 21:50:07] 2025-11-25 05:49:36,406 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 21:50:07] 2025-11-25 05:49:36,406 | INFO     | ***************************************
[2025-11-24 21:50:07] 2025-11-25 05:49:36,406 | INFO     | 
[2025-11-24 21:50:07] 2025-11-25 05:49:36,408 | INFO     | architecture information:
[2025-11-24 21:50:07] 2025-11-25 05:49:36,408 | INFO     | executing command: cat /etc/os-release
[2025-11-24 21:50:07] 2025-11-25 05:49:36,420 | INFO     | cat /etc/os-release:
[2025-11-24 21:50:07] NAME="CentOS Linux"
[2025-11-24 21:50:07] VERSION="7 (Core)"
[2025-11-24 21:50:07] ID="centos"
[2025-11-24 21:50:07] ID_LIKE="rhel fedora"
[2025-11-24 21:50:07] VERSION_ID="7"
[2025-11-24 21:50:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 21:50:07] ANSI_COLOR="0;31"
[2025-11-24 21:50:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 21:50:07] HOME_URL="https://www.centos.org/"
[2025-11-24 21:50:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 21:50:07] 
[2025-11-24 21:50:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 21:50:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 21:50:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 21:50:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:50:07] 
[2025-11-24 21:50:07] 2025-11-25 05:49:36,421 | INFO     | ***************************************
[2025-11-24 21:50:07] 2025-11-25 05:49:36,924 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 21:50:07] 2025-11-25 05:49:36,942 | INFO     | sufficient remaining disk space (994194751488 B)
[2025-11-24 21:50:07] 2025-11-25 05:49:36,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:50:07] 2025-11-25 05:49:36,942 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:50:07] 2025-11-25 05:49:36,942 | INFO     | update_server=False
[2025-11-24 21:50:07] 2025-11-25 05:49:36,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:50:07] 2025-11-25 05:49:36,943 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:50:07] 2025-11-25 05:49:37,004 | INFO     | all job control threads have been joined
[2025-11-24 21:50:07] 2025-11-25 05:49:37,309 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:50:07] 2025-11-25 05:49:37,309 | INFO     | aborting loop
[2025-11-24 21:50:07] 2025-11-25 05:49:37,772 | INFO     | all data control threads have been joined
[2025-11-24 21:50:07] 2025-11-25 05:49:37,948 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:37,952 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:37,975 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:38,010 | INFO     | [job] control thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:38,260 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:38,315 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:38,396 | INFO     | all payload control threads have been joined
[2025-11-24 21:50:07] 2025-11-25 05:49:38,567 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:38,624 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:38,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:38,779 | INFO     | [data] control thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:38,948 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:38,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:50:07] 2025-11-25 05:49:39,099 | INFO     | [job] validate thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:39,171 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:39,401 | INFO     | [payload] control thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:39,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:50:07] 2025-11-25 05:49:40,524 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:50:07] 2025-11-25 05:49:40,562 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:42,982 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:50:07] 2025-11-25 05:49:45,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139952469882688)>', '<ExcThread(monitor, started 139951702271744)>']
[2025-11-24 21:50:07] 2025-11-25 05:49:50,037 | INFO     | all workflow threads have been joined
[2025-11-24 21:50:07] 2025-11-25 05:49:50,038 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:50:07] 2025-11-25 05:49:50,038 | INFO     | traces error code: 0
[2025-11-24 21:50:07] 2025-11-25 05:49:50,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:50:07] 2025-11-25 05:50:06,627 | INFO     | PID=3816106 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 21:50:07] 2025-11-25 05:50:06,628 | INFO     | .. there are 19 such processes running
[2025-11-24 21:50:07] 2025-11-25 05:50:06,628 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:50:07] 2025-11-25 05:50:06,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:50:07] 2025-11-25 05:50:06,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:50:07] 2025-11-25 05:50:06,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:50:07] 2025-11-25 05:50:06,629 | INFO     | [monitor] control thread has ended
[2025-11-24 21:50:07] 2025-11-25 05:50:07,001 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:50:07] 2025-11-25 05:50:07,021 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:50:07] 2025-11-25 05:50:07,030 [wrapper] pilotpid: 3816106
[2025-11-24 21:50:07] 2025-11-25 05:50:07,032 [wrapper] Pilot exit status: 0
[2025-11-24 21:50:07] 2025-11-25 05:50:07,061 [wrapper] pandaids: 6896045264
[2025-11-24 21:50:07] 2025-11-25 05:50:07,116 [wrapper] cleanup supervisor_pilot 3816112 3816107
[2025-11-24 21:50:07] 2025-11-25 05:50:07,119 [wrapper] Test setup, not cleaning
[2025-11-24 21:50:07] 2025-11-25 05:50:07,121 [wrapper] apfmon messages muted
[2025-11-24 21:50:07] 2025-11-25 05:50:07,123 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:50:07] 2025-11-25 05:50:07,125 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:50:07]  *** Error codes and diagnostics ***
[2025-11-24 21:50:07]     "exeErrorCode": 65,
[2025-11-24 21:50:07]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 21:50:07]     "pilotErrorCode": 1305,
[2025-11-24 21:50:07]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 21:50:07]  *** Listing of results directory ***
[2025-11-24 21:50:07] total 403780
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc    576529 Nov 24 10:01 pilot3.tar.gz
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc      5112 Nov 24 10:56 queuedata.json
[2025-11-24 21:50:07] -rwx------. 1 boinc boinc     36292 Nov 24 10:56 runpilot2-wrapper.sh
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc       100 Nov 24 21:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:50:07] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 21:42 run_atlas
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc       105 Nov 24 21:42 job.xml
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc      6444 Nov 24 21:42 init_data.xml
[2025-11-24 21:50:07] -rw-r--r--. 2 boinc boinc 409218294 Nov 24 21:42 EVNT.47483658._003038.pool.root.1
[2025-11-24 21:50:07] -rw-r--r--. 2 boinc boinc     15847 Nov 24 21:42 start_atlas.sh
[2025-11-24 21:50:07] drwxrwx--x. 2 boinc boinc      4096 Nov 24 21:42 shared
[2025-11-24 21:50:07] -rw-r--r--. 2 boinc boinc    590100 Nov 24 21:42 input.tar.gz
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc         0 Nov 24 21:42 boinc_lockfile
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc      2784 Nov 24 21:42 pandaJob.out
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc    991801 Nov 24 21:42 agis_schedconf.cvmfs.json
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc   1516227 Nov 24 21:42 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:50:07] drwx------. 5 boinc boinc      4096 Nov 24 21:42 pilot3
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc       524 Nov 24 21:46 boinc_task_state.xml
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc      1012 Nov 24 21:47 memory_monitor_summary.json
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc     51126 Nov 24 21:47 log.47556173._000205.job.log.tgz.1
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc     10331 Nov 24 21:49 heartbeat.json
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc        23 Nov 24 21:50 wrapper_checkpoint.txt
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc      8192 Nov 24 21:50 boinc_mmap_file
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc       823 Nov 24 21:50 pilotlog.txt
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc        95 Nov 24 21:50 pilot_heartbeat.json
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc    117874 Nov 24 21:50 log.47556173._000205.job.log.1
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc       186 Nov 24 21:50 output.list
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc       620 Nov 24 21:50 runtime_log
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc    194560 Nov 24 21:50 result.tar.gz
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc      8634 Nov 24 21:50 runtime_log.err
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc       644 Nov 24 21:50 RiMLDmKvqh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm49IKDmZk0bWo.diag
[2025-11-24 21:50:07] -rw-r--r--. 1 boinc boinc     22607 Nov 24 21:50 stderr.txt
[2025-11-24 21:50:07] No HITS result produced
[2025-11-24 21:50:07]  *** Contents of shared directory: ***
[2025-11-24 21:50:07] total 400420
[2025-11-24 21:50:07] -rw-r--r--. 2 boinc boinc 409218294 Nov 24 21:42 ATLAS.root_0
[2025-11-24 21:50:07] -rw-r--r--. 2 boinc boinc     15847 Nov 24 21:42 start_atlas.sh
[2025-11-24 21:50:07] -rw-r--r--. 2 boinc boinc    590100 Nov 24 21:42 input.tar.gz
[2025-11-24 21:50:07] -rw-------. 1 boinc boinc    194560 Nov 24 21:50 result.tar.gz
21:50:08 (3812405): run_atlas exited; CPU time 57.724923
21:50:08 (3812405): called boinc_finish(0)

</stderr_txt>
]]>

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