Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:37:20 (3580498): wrapper (7.7.26015): starting
07:37:20 (3580498): wrapper: running run_atlas (--nthreads 3)
[2025-11-25 07:37:20] Arguments: --nthreads 3
[2025-11-25 07:37:20] Threads: 3
[2025-11-25 07:37:20] Checking for CVMFS
[2025-11-25 07:37:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 07:37:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 07:37:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 07:37:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 07:37:20] 2.9.2.0 3559337 4 47144 153273 3 88 35124736 36864000 0 130560 0 62628 99.998 1292 22275 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 07:37:20] CVMFS is ok
[2025-11-25 07:37:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 07:37:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 07:37:20] Further information can be found at the LHC@home message board.
[2025-11-25 07:37:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 07:37:20] Checking for apptainer binary...
[2025-11-25 07:37:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 07:37:20] Running /usr/bin/apptainer --version
[2025-11-25 07:37:20] apptainer version 1.4.1-1.1
[2025-11-25 07:37:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 07:37:20] thA335
[2025-11-25 07:37:20] apptainer works
[2025-11-25 07:37:20] Set ATHENA_PROC_NUMBER=3
[2025-11-25 07:37:20] Set ATHENA_CORE_NUMBER=3
[2025-11-25 07:37:20] Starting ATLAS job with PandaID=6895369440
[2025-11-25 07:37:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:41:38]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:41:38] 2025-11-25 06:40:43,073 | INFO     | 
[2025-11-25 07:41:38] 2025-11-25 06:40:43,074 | INFO     | architecture information:
[2025-11-25 07:41:38] 2025-11-25 06:40:43,074 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:41:38] 2025-11-25 06:40:43,085 | INFO     | cat /etc/os-release:
[2025-11-25 07:41:38] NAME="CentOS Linux"
[2025-11-25 07:41:38] VERSION="7 (Core)"
[2025-11-25 07:41:38] ID="centos"
[2025-11-25 07:41:38] ID_LIKE="rhel fedora"
[2025-11-25 07:41:38] VERSION_ID="7"
[2025-11-25 07:41:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:41:38] ANSI_COLOR="0;31"
[2025-11-25 07:41:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:41:38] HOME_URL="https://www.centos.org/"
[2025-11-25 07:41:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:41:38] 
[2025-11-25 07:41:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:41:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:41:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:41:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:41:38] 
[2025-11-25 07:41:38] 2025-11-25 06:40:43,086 | INFO     | ***************************************
[2025-11-25 07:41:38] 2025-11-25 06:40:43,589 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 07:41:38] 2025-11-25 06:40:43,600 | INFO     | sufficient remaining disk space (826905985024 B)
[2025-11-25 07:41:38] 2025-11-25 06:40:43,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:41:38] 2025-11-25 06:40:43,600 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:41:38] 2025-11-25 06:40:43,600 | INFO     | update_server=False
[2025-11-25 07:41:38] 2025-11-25 06:40:43,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:41:38] 2025-11-25 06:40:43,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:41:38] 2025-11-25 06:40:43,989 | INFO     | all data control threads have been joined
[2025-11-25 07:41:38] 2025-11-25 06:40:44,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:41:38] 2025-11-25 06:40:44,090 | INFO     | aborting loop
[2025-11-25 07:41:38] 2025-11-25 06:40:44,156 | INFO     | all job control threads have been joined
[2025-11-25 07:41:38] 2025-11-25 06:40:44,207 | INFO     | all payload control threads have been joined
[2025-11-25 07:41:38] 2025-11-25 06:40:44,606 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:44,607 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:44,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:44,996 | INFO     | [data] control thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,054 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:41:38] 2025-11-25 06:40:45,096 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,161 | INFO     | [job] control thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,203 | INFO     | [job] validate thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,212 | INFO     | [payload] control thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,279 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,335 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,486 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,792 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:45,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:41:38] 2025-11-25 06:40:46,126 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:47,081 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:40:49,890 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:41:38] 2025-11-25 06:41:13,740 | INFO     | PID=3584230 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 07:41:38] 2025-11-25 06:41:13,740 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:41:38] 2025-11-25 06:41:13,741 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:41:38] 2025-11-25 06:41:13,741 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:41:38] 2025-11-25 06:41:33,076 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:41:38] 2025-11-25 06:41:33,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670387255104)>', '<ExcThread(monitor, started 139669870188288)>']
[2025-11-25 07:41:38] 2025-11-25 06:41:33,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:41:38] 2025-11-25 06:41:33,847 | INFO     | [monitor] control thread has ended
[2025-11-25 07:41:38] 2025-11-25 06:41:38,777 | INFO     | all workflow threads have been joined
[2025-11-25 07:41:38] 2025-11-25 06:41:38,777 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:41:38] 2025-11-25 06:41:38,778 | INFO     | traces error code: 0
[2025-11-25 07:41:38] 2025-11-25 06:41:38,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:41:38] 2025-11-25 06:41:38,825 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:41:38] 2025-11-25 06:41:38,828 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:41:38] 2025-11-25 06:41:38,831 [wrapper] pilotpid: 3584230
[2025-11-25 07:41:38] 2025-11-25 06:41:38,834 [wrapper] Pilot exit status: 0
[2025-11-25 07:41:38] 2025-11-25 06:41:38,841 [wrapper] pandaids: 6895369440
[2025-11-25 07:41:38] 2025-11-25 06:41:38,859 [wrapper] cleanup supervisor_pilot 3584236 3584231
[2025-11-25 07:41:38] 2025-11-25 06:41:38,862 [wrapper] Test setup, not cleaning
[2025-11-25 07:41:38] 2025-11-25 06:41:38,865 [wrapper] apfmon messages muted
[2025-11-25 07:41:38] 2025-11-25 06:41:38,868 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:41:38] 2025-11-25 06:41:38,871 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:41:38]  *** Error codes and diagnostics ***
[2025-11-25 07:41:38]     "exeErrorCode": 65,
[2025-11-25 07:41:38]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 07:41:38]     "pilotErrorCode": 1305,
[2025-11-25 07:41:38]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-25 07:41:38]  *** Listing of results directory ***
[2025-11-25 07:41:38] total 404192
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc    576529 Nov 23 21:16 pilot3.tar.gz
[2025-11-25 07:41:38] -rwx------ 1 boinc boinc     36292 Nov 23 21:21 runpilot2-wrapper.sh
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc      5112 Nov 23 21:21 queuedata.json
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc       100 Nov 25 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:41:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 07:37 run_atlas
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc       105 Nov 25 07:37 job.xml
[2025-11-25 07:41:38] -rw-r--r-- 2 boinc boinc 409701416 Nov 25 07:37 EVNT.47483658._000885.pool.root.1
[2025-11-25 07:41:38] -rw-r--r-- 2 boinc boinc    590106 Nov 25 07:37 input.tar.gz
[2025-11-25 07:41:38] -rw-r--r-- 2 boinc boinc     15847 Nov 25 07:37 start_atlas.sh
[2025-11-25 07:41:38] drwxrwx--x 2 boinc boinc      4096 Nov 25 07:37 shared
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc         0 Nov 25 07:37 boinc_setup_complete
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc      6196 Nov 25 07:37 init_data.xml
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc         0 Nov 25 07:37 boinc_lockfile
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc      2786 Nov 25 07:37 pandaJob.out
[2025-11-25 07:41:38] -rw------- 1 boinc boinc    991801 Nov 25 07:37 agis_schedconf.cvmfs.json
[2025-11-25 07:41:38] -rw------- 1 boinc boinc   1516227 Nov 25 07:37 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:41:38] drwx------ 5 boinc boinc      4096 Nov 25 07:37 pilot3
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc       522 Nov 25 07:38 boinc_task_state.xml
[2025-11-25 07:41:38] -rw------- 1 boinc boinc       984 Nov 25 07:38 memory_monitor_summary.json
[2025-11-25 07:41:38] -rw------- 1 boinc boinc     56056 Nov 25 07:38 log.47556137._008718.job.log.tgz.1
[2025-11-25 07:41:38] -rw------- 1 boinc boinc        95 Nov 25 07:40 pilot_heartbeat.json
[2025-11-25 07:41:38] -rw------- 1 boinc boinc      8384 Nov 25 07:40 heartbeat.json
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc        22 Nov 25 07:41 wrapper_checkpoint.txt
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc      8192 Nov 25 07:41 boinc_mmap_file
[2025-11-25 07:41:38] -rw------- 1 boinc boinc      4752 Nov 25 07:41 pilotlog.txt
[2025-11-25 07:41:38] -rw------- 1 boinc boinc     91625 Nov 25 07:41 log.47556137._008718.job.log.1
[2025-11-25 07:41:38] -rw------- 1 boinc boinc       186 Nov 25 07:41 output.list
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc       620 Nov 25 07:41 runtime_log
[2025-11-25 07:41:38] -rw------- 1 boinc boinc    163840 Nov 25 07:41 result.tar.gz
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc      8744 Nov 25 07:41 runtime_log.err
[2025-11-25 07:41:38] -rw------- 1 boinc boinc       649 Nov 25 07:41 2oKODmplVh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHBLKDm1rJvIm.diag
[2025-11-25 07:41:38] -rw-r--r-- 1 boinc boinc      9400 Nov 25 07:41 stderr.txt
[2025-11-25 07:41:38] No HITS result produced
[2025-11-25 07:41:38]  *** Contents of shared directory: ***
[2025-11-25 07:41:38] total 400860
[2025-11-25 07:41:38] -rw-r--r-- 2 boinc boinc 409701416 Nov 25 07:37 ATLAS.root_0
[2025-11-25 07:41:38] -rw-r--r-- 2 boinc boinc    590106 Nov 25 07:37 input.tar.gz
[2025-11-25 07:41:38] -rw-r--r-- 2 boinc boinc     15847 Nov 25 07:37 start_atlas.sh
[2025-11-25 07:41:38] -rw------- 1 boinc boinc    163840 Nov 25 07:41 result.tar.gz
07:41:40 (3580498): run_atlas exited; CPU time 30.334124
07:41:40 (3580498): called boinc_finish(0)

</stderr_txt>
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