Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:13:14 (721609): wrapper (7.7.26015): starting
01:13:14 (721609): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 01:13:14] Arguments: --nthreads 8
[2025-11-25 01:13:14] Threads: 8
[2025-11-25 01:13:14] Checking for CVMFS
[2025-11-25 01:13:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 01:13:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 01:13:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 01:13:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 01:13:16] 2.13.3.0 12130 26538 351372 153272 3 328 28661842 40960001 16538 16776704 0 89017368 99.649 79246974 36301 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 01:13:16] CVMFS is ok
[2025-11-25 01:13:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 01:13:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 01:13:16] Further information can be found at the LHC@home message board.
[2025-11-25 01:13:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 01:13:16] Checking for apptainer binary...
[2025-11-25 01:13:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 01:13:16] Running /usr/bin/apptainer --version
[2025-11-25 01:13:17] apptainer version 1.4.4-1.el9
[2025-11-25 01:13:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 01:13:17] c6-5-7-4.aglt2.org
[2025-11-25 01:13:17] apptainer works
[2025-11-25 01:13:17] Set ATHENA_PROC_NUMBER=8
[2025-11-25 01:13:17] Set ATHENA_CORE_NUMBER=8
[2025-11-25 01:13:17] Starting ATLAS job with PandaID=6896045249
[2025-11-25 01:13:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:27:40]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:27:40] 2025-11-26 00:27:00,995 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-25 19:27:40] 2025-11-26 00:27:01,844 | INFO     | monitor loop #4092: job 0:6896045249 is in state 'finished'
[2025-11-25 19:27:40] 2025-11-26 00:27:01,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:27:40] 2025-11-26 00:27:02,230 | INFO     | time since job start (65556s) is within the limit (172800.0s)
[2025-11-25 19:27:40] 2025-11-26 00:27:04,236 | INFO     | time since job start (65558s) is within the limit (172800.0s)
[2025-11-25 19:27:40] 2025-11-26 00:27:04,349 | INFO     | monitor loop #4093: job 0:6896045249 is in state 'finished'
[2025-11-25 19:27:40] 2025-11-26 00:27:04,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:27:40] 2025-11-26 00:27:06,242 | INFO     | time since job start (65560s) is within the limit (172800.0s)
[2025-11-25 19:27:40] 2025-11-26 00:27:06,793 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 19:27:40] 2025-11-26 00:27:06,800 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2728.910303571428
[2025-11-25 19:27:40] 2025-11-26 00:27:06,818 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6896045249/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:27:40] 2025-11-26 00:27:06,819 | INFO     | extracted standard info from prmon json
[2025-11-25 19:27:40] 2025-11-26 00:27:06,819 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:27:40] 2025-11-26 00:27:06,819 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:27:40] 2025-11-26 00:27:06,836 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:27:40] 2025-11-26 00:27:06,838 | INFO     | sum of square deviations: 382999861967.996
[2025-11-25 19:27:40] 2025-11-26 00:27:06,861 | INFO     | sum of deviations: 2038163433501.559
[2025-11-25 19:27:40] 2025-11-26 00:27:06,862 | INFO     | mean x: 1764084104.998136
[2025-11-25 19:27:40] 2025-11-26 00:27:06,862 | INFO     | mean y: 2893081.780055918
[2025-11-25 19:27:40] 2025-11-26 00:27:06,862 | INFO     | intersect: -9384817132.927464
[2025-11-25 19:27:40] 2025-11-26 00:27:06,863 | INFO     | chi2: 11.931804026408338
[2025-11-25 19:27:40] 2025-11-26 00:27:06,864 | INFO     | sum of square deviations: 377672276891.64886
[2025-11-25 19:27:40] 2025-11-26 00:27:06,862 | INFO     | monitor loop #4094: job 0:6896045249 is in state 'finished'
[2025-11-25 19:27:40] 2025-11-26 00:27:06,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:27:40] 2025-11-26 00:27:06,886 | INFO     | sum of deviations: 2385856829471.0186
[2025-11-25 19:27:40] 2025-11-26 00:27:06,886 | INFO     | mean x: 1764083952.5355806
[2025-11-25 19:27:40] 2025-11-26 00:27:06,886 | INFO     | mean y: 2903029.604868914
[2025-11-25 19:27:40] 2025-11-26 00:27:06,886 | INFO     | intersect: -11141287326.534851
[2025-11-25 19:27:40] 2025-11-26 00:27:06,888 | INFO     | chi2: 8.996791230470107
[2025-11-25 19:27:40] 2025-11-26 00:27:06,888 | INFO     | current chi2=8.996791230470107 (change=24.598231662557037 %)
[2025-11-25 19:27:40] 2025-11-26 00:27:06,888 | INFO     | right removable region: 1067
[2025-11-25 19:27:40] 2025-11-26 00:27:06,889 | INFO     | sum of square deviations: 377667041871.648
[2025-11-25 19:27:40] 2025-11-26 00:27:06,908 | INFO     | sum of deviations: 1622950256701.5894
[2025-11-25 19:27:40] 2025-11-26 00:27:06,908 | INFO     | mean x: 1764084257.5355806
[2025-11-25 19:27:40] 2025-11-26 00:27:06,908 | INFO     | mean y: 2904956.6161048687
[2025-11-25 19:27:40] 2025-11-26 00:27:06,908 | INFO     | intersect: -7577902159.678717
[2025-11-25 19:27:40] 2025-11-26 00:27:06,909 | INFO     | chi2: 8.10596332603783
[2025-11-25 19:27:40] 2025-11-26 00:27:06,910 | INFO     | current chi2=8.10596332603783 (change=32.06422676657175 %)
[2025-11-25 19:27:40] 2025-11-26 00:27:06,911 | INFO     | sum of square deviations: 372383962163.4228
[2025-11-25 19:27:40] 2025-11-26 00:27:06,930 | INFO     | sum of deviations: 1361459790719.3877
[2025-11-25 19:27:40] 2025-11-26 00:27:06,930 | INFO     | mean x: 1764084410.0724366
[2025-11-25 19:27:40] 2025-11-26 00:27:06,930 | INFO     | mean y: 2912498.9040451553
[2025-11-25 19:27:40] 2025-11-26 00:27:06,930 | INFO     | intersect: -6446693917.5359335
[2025-11-25 19:27:40] 2025-11-26 00:27:06,932 | INFO     | chi2: 6.472055603067738
[2025-11-25 19:27:40] 2025-11-26 00:27:06,932 | INFO     | current chi2=6.472055603067738 (change=20.156860538977313 %)
[2025-11-25 19:27:40] 2025-11-26 00:27:06,932 | INFO     | left removable region: 20
[2025-11-25 19:27:40] 2025-11-26 00:27:06,933 | INFO     | sum of square deviations: 355816259451.51917
[2025-11-25 19:27:40] 2025-11-26 00:27:06,950 | INFO     | sum of deviations: 1654774195800.1733
[2025-11-25 19:27:40] 2025-11-26 00:27:06,951 | INFO     | mean x: 1764084532.1814709
[2025-11-25 19:27:40] 2025-11-26 00:27:06,951 | INFO     | mean y: 2928077.2254059217
[2025-11-25 19:27:40] 2025-11-26 00:27:06,951 | INFO     | intersect: -8201198309.702288
[2025-11-25 19:27:40] 2025-11-26 00:27:06,952 | INFO     | chi2: 2.913459199383287
[2025-11-25 19:27:40] 2025-11-26 00:27:06,952 | INFO     | current memory leak: 4.65 B/s (using 1047 data points, chi2=2.91)
[2025-11-25 19:27:40] 2025-11-26 00:27:06,953 | INFO     | could have reported an average CPU frequency of 2815 MHz (39 samples)
[2025-11-25 19:27:40] 2025-11-26 00:27:06,953 | INFO     | ..............................
[2025-11-25 19:27:40] 2025-11-26 00:27:06,954 | INFO     | . Timing measurements:
[2025-11-25 19:27:40] 2025-11-26 00:27:06,954 | INFO     | . get job = 0 s
[2025-11-25 19:27:40] 2025-11-26 00:27:06,954 | INFO     | . initial setup = 4 s
[2025-11-25 19:27:40] 2025-11-26 00:27:06,954 | INFO     | . payload setup = 43 s
[2025-11-25 19:27:40] 2025-11-26 00:27:06,954 | INFO     | . stage-in = 0 s
[2025-11-25 19:27:40] 2025-11-26 00:27:06,954 | INFO     | . payload execution = 65438 s
[2025-11-25 19:27:40] 2025-11-26 00:27:06,954 | INFO     | . stage-out = 3 s
[2025-11-25 19:27:40] 2025-11-26 00:27:06,954 | INFO     | . log creation = 0 s
[2025-11-25 19:27:40] 2025-11-26 00:27:06,954 | INFO     | ..............................
[2025-11-25 19:27:40] 2025-11-26 00:27:07,480 | INFO     | 
[2025-11-25 19:27:40] 2025-11-26 00:27:07,480 | INFO     | job summary report
[2025-11-25 19:27:40] 2025-11-26 00:27:07,480 | INFO     | --------------------------------------------------
[2025-11-25 19:27:40] 2025-11-26 00:27:07,480 | INFO     | PanDA job id: 6896045249
[2025-11-25 19:27:40] 2025-11-26 00:27:07,480 | INFO     | task id: 47556173
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | errors: (none)
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | pilot state: finished 
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | transexitcode: 0
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | exeerrorcode: 0
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | exeerrordiag: 
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | exitcode: 0
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | exitmsg: OK
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | cpuconsumptiontime: 242217 s
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | nevents: 1000
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | neventsw: 0
[2025-11-25 19:27:40] 2025-11-26 00:27:07,481 | INFO     | pid: 738250
[2025-11-25 19:27:40] 2025-11-26 00:27:07,482 | INFO     | pgrp: 738250
[2025-11-25 19:27:40] 2025-11-26 00:27:07,482 | INFO     | corecount: 8
[2025-11-25 19:27:40] 2025-11-26 00:27:07,482 | INFO     | event service: False
[2025-11-25 19:27:40] 2025-11-26 00:27:07,482 | INFO     | sizes: {0: 2284136, 1: 2284164, 2: 2284363, 13: 2284363, 23: 2284419, 28: 2284709, 34: 2284865, 65485: 2340728, 65490: 2349727, 65492: 2349783, 65498: 2350029}
[2025-11-25 19:27:40] 2025-11-26 00:27:07,482 | INFO     | --------------------------------------------------
[2025-11-25 19:27:40] 2025-11-26 00:27:07,482 | INFO     | 
[2025-11-25 19:27:40] 2025-11-26 00:27:07,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 19:27:40] 2025-11-26 00:27:07,500 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | job 6896045249 has completed (purged errors)
[2025-11-25 19:27:40] 2025-11-26 00:27:07,502 | INFO     | overall cleanup function is called
[2025-11-25 19:27:40] 2025-11-26 00:27:08,522 | INFO     | --- collectZombieJob: --- 10, [738250]
[2025-11-25 19:27:40] 2025-11-26 00:27:08,522 | INFO     | zombie collector waiting for pid 738250
[2025-11-25 19:27:40] 2025-11-26 00:27:08,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:27:40] 2025-11-26 00:27:08,522 | INFO     | collected zombie processes
[2025-11-25 19:27:40] 2025-11-26 00:27:08,522 | INFO     | will attempt to kill all subprocesses of pid=738250
[2025-11-25 19:27:40] 2025-11-26 00:27:08,829 | INFO     | process IDs to be killed: [738250] (in reverse order)
[2025-11-25 19:27:40] 2025-11-26 00:27:08,929 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:27:40] 2025-11-26 00:27:08,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:27:40] 2025-11-26 00:27:08,942 | INFO     | did not find any defunct processes belonging to 738250
[2025-11-25 19:27:40] 2025-11-26 00:27:08,954 | INFO     | did not find any defunct processes belonging to 738250
[2025-11-25 19:27:40] 2025-11-26 00:27:08,955 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:27:40] 2025-11-26 00:27:08,955 | INFO     | ready for new job
[2025-11-25 19:27:40] 2025-11-26 00:27:08,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:27:40] 2025-11-26 00:27:08,960 | INFO     | ***************************************
[2025-11-25 19:27:40] 2025-11-26 00:27:08,960 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:27:40] 2025-11-26 00:27:08,960 | INFO     | ***************************************
[2025-11-25 19:27:40] 2025-11-26 00:27:08,960 | INFO     | 
[2025-11-25 19:27:40] 2025-11-26 00:27:08,963 | INFO     | architecture information:
[2025-11-25 19:27:40] 2025-11-26 00:27:08,963 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:27:40] 2025-11-26 00:27:08,985 | INFO     | cat /etc/os-release:
[2025-11-25 19:27:40] NAME="CentOS Linux"
[2025-11-25 19:27:40] VERSION="7 (Core)"
[2025-11-25 19:27:40] ID="centos"
[2025-11-25 19:27:40] ID_LIKE="rhel fedora"
[2025-11-25 19:27:40] VERSION_ID="7"
[2025-11-25 19:27:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:27:40] ANSI_COLOR="0;31"
[2025-11-25 19:27:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:27:40] HOME_URL="https://www.centos.org/"
[2025-11-25 19:27:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:27:40] 
[2025-11-25 19:27:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:27:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:27:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:27:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:27:40] 
[2025-11-25 19:27:40] 2025-11-26 00:27:08,985 | INFO     | ***************************************
[2025-11-25 19:27:40] 2025-11-26 00:27:09,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 19:27:40] 2025-11-26 00:27:09,512 | INFO     | sufficient remaining disk space (71359791104 B)
[2025-11-25 19:27:40] 2025-11-26 00:27:09,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:27:40] 2025-11-26 00:27:09,513 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:27:40] 2025-11-26 00:27:09,513 | INFO     | update_server=False
[2025-11-25 19:27:40] 2025-11-26 00:27:09,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:27:40] 2025-11-26 00:27:09,793 | INFO     | all data control threads have been joined
[2025-11-25 19:27:40] 2025-11-26 00:27:10,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:27:40] 2025-11-26 00:27:10,230 | INFO     | all payload control threads have been joined
[2025-11-25 19:27:40] 2025-11-26 00:27:10,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:27:40] 2025-11-26 00:27:10,381 | INFO     | aborting loop
[2025-11-25 19:27:40] 2025-11-26 00:27:10,519 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:10,546 | INFO     | all job control threads have been joined
[2025-11-25 19:27:40] 2025-11-26 00:27:10,717 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:10,799 | INFO     | [data] control thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:10,885 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:11,236 | INFO     | [payload] control thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:11,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:11,270 | INFO     | [job] validate thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:11,386 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:11,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:27:40] 2025-11-26 00:27:11,552 | INFO     | [job] control thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:11,632 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:11,647 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:11,792 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:12,005 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:12,043 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:12,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:27:40] 2025-11-26 00:27:13,052 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:15,422 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:27:40] 2025-11-26 00:27:23,628 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:27:40] 2025-11-26 00:27:24,384 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104092862272)>', '<ExcThread(monitor, started 140103728994048)>']
[2025-11-25 19:27:40] 2025-11-26 00:27:29,410 | INFO     | all workflow threads have been joined
[2025-11-25 19:27:40] 2025-11-26 00:27:29,410 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:27:40] 2025-11-26 00:27:29,410 | INFO     | traces error code: 0
[2025-11-25 19:27:40] 2025-11-26 00:27:29,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:27:40] 2025-11-26 00:27:39,826 | INFO     | PID=727423 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 19:27:40] 2025-11-26 00:27:39,827 | INFO     | .. there are 23 such processes running
[2025-11-25 19:27:40] 2025-11-26 00:27:39,827 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:27:40] 2025-11-26 00:27:39,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:27:40] 2025-11-26 00:27:39,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:27:40] 2025-11-26 00:27:39,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:27:40] 2025-11-26 00:27:39,827 | INFO     | [monitor] control thread has ended
[2025-11-25 19:27:40] 2025-11-26 00:27:39,984 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:27:40] 2025-11-26 00:27:39,988 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:27:40] 2025-11-26 00:27:39,992 [wrapper] pilotpid: 727423
[2025-11-25 19:27:40] 2025-11-26 00:27:39,995 [wrapper] Pilot exit status: 0
[2025-11-25 19:27:40] 2025-11-26 00:27:40,124 [wrapper] pandaids: 6896045249
[2025-11-25 19:27:40] 2025-11-26 00:27:40,196 [wrapper] cleanup supervisor_pilot 3462544 727424
[2025-11-25 19:27:40] 2025-11-26 00:27:40,200 [wrapper] Test setup, not cleaning
[2025-11-25 19:27:40] 2025-11-26 00:27:40,203 [wrapper] apfmon messages muted
[2025-11-25 19:27:40] 2025-11-26 00:27:40,206 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:27:40] 2025-11-26 00:27:40,209 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:27:40]  *** Error codes and diagnostics ***
[2025-11-25 19:27:40]     "exeErrorCode": 0,
[2025-11-25 19:27:40]     "exeErrorDiag": "",
[2025-11-25 19:27:40]     "pilotErrorCode": 0,
[2025-11-25 19:27:40]     "pilotErrorDiag": "",
[2025-11-25 19:27:40]  *** Listing of results directory ***
[2025-11-25 19:27:40] total 1315980
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 13:47 queuedata.json
[2025-11-25 19:27:40] -rwx------. 1 boincer umatlas     36292 Nov 24 13:49 runpilot2-wrapper.sh
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas       100 Nov 25 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:27:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 01:13 run_atlas
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas       105 Nov 25 01:13 job.xml
[2025-11-25 19:27:40] -rw-r--r--. 2 boincer umatlas 409092304 Nov 25 01:13 EVNT.47483658._003036.pool.root.1
[2025-11-25 19:27:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 01:13 start_atlas.sh
[2025-11-25 19:27:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 01:13 shared
[2025-11-25 19:27:40] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 01:13 input.tar.gz
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas         0 Nov 25 01:13 boinc_lockfile
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 01:13 pandaJob.out
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas        57 Nov 25 01:13 setup.sh.local
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas    991801 Nov 25 01:14 agis_schedconf.cvmfs.json
[2025-11-25 19:27:40] drwx------. 5 boincer umatlas      4096 Nov 25 01:14 pilot3
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas       533 Nov 25 19:11 boinc_task_state.xml
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas      6840 Nov 25 19:20 init_data.xml
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas 913225782 Nov 25 19:26 HITS.47556173._000190.pool.root.1
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas        95 Nov 25 19:26 pilot_heartbeat.json
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas      1056 Nov 25 19:26 memory_monitor_summary.json
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas   1516240 Nov 25 19:26 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas   2198028 Nov 25 19:26 log.47556173._000190.job.log.tgz.1
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas      8628 Nov 25 19:27 heartbeat.json
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 19:27 boinc_mmap_file
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas        29 Nov 25 19:27 wrapper_checkpoint.txt
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas       822 Nov 25 19:27 pilotlog.txt
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas   8467390 Nov 25 19:27 log.47556173._000190.job.log.1
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas       353 Nov 25 19:27 output.list
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas       620 Nov 25 19:27 runtime_log
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas  10680320 Nov 25 19:27 result.tar.gz
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas       660 Nov 25 19:27 yv1NDmonqh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLrLKDmg0CFIm.diag
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas      9343 Nov 25 19:27 runtime_log.err
[2025-11-25 19:27:40] -rw-r--r--. 1 boincer umatlas     21683 Nov 25 19:27 stderr.txt
[2025-11-25 19:27:40] HITS file was successfully produced:
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas 913225782 Nov 25 19:26 shared/HITS.pool.root.1
[2025-11-25 19:27:40]  *** Contents of shared directory: ***
[2025-11-25 19:27:40] total 1302364
[2025-11-25 19:27:40] -rw-r--r--. 2 boincer umatlas 409092304 Nov 25 01:13 ATLAS.root_0
[2025-11-25 19:27:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 01:13 start_atlas.sh
[2025-11-25 19:27:40] -rw-r--r--. 2 boincer umatlas    590105 Nov 25 01:13 input.tar.gz
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas 913225782 Nov 25 19:26 HITS.pool.root.1
[2025-11-25 19:27:40] -rw-------. 1 boincer umatlas  10680320 Nov 25 19:27 result.tar.gz
19:27:41 (721609): run_atlas exited; CPU time 243496.830219
19:27:41 (721609): called boinc_finish(0)

</stderr_txt>
]]>

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