Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:12 (383537): wrapper (7.7.26015): starting
00:18:12 (383537): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:18:12] Arguments: --nthreads 12
[2025-11-25 00:18:12] Threads: 12
[2025-11-25 00:18:12] Checking for CVMFS
[2025-11-25 00:18:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:18:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:18:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:18:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:18:13] 2.13.2.0 6639 31969 309996 153272 2 59 27252580 40960000 19982 16776704 0 55025441 99.675 49155368 41775 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:18:13] CVMFS is ok
[2025-11-25 00:18:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:18:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:18:13] Further information can be found at the LHC@home message board.
[2025-11-25 00:18:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:18:13] Checking for apptainer binary...
[2025-11-25 00:18:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:18:13] Running /usr/bin/apptainer --version
[2025-11-25 00:18:13] apptainer version 1.4.4-1.el9
[2025-11-25 00:18:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:18:14] c-206-37.aglt2.org
[2025-11-25 00:18:14] apptainer works
[2025-11-25 00:18:14] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:18:14] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:18:14] Starting ATLAS job with PandaID=6895386973
[2025-11-25 00:18:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 19:28:51]  *** The last 200 lines of the pilot log: ***
[2025-11-25 19:28:51] 2025-11-26 00:28:08,273 | INFO     | monitor loop #4563: job 0:6895386973 is in state 'finished'
[2025-11-25 19:28:51] 2025-11-26 00:28:08,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 19:28:51] 2025-11-26 00:28:08,333 | INFO     | time since job start (68967s) is within the limit (172800.0s)
[2025-11-25 19:28:51] 2025-11-26 00:28:08,920 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 19:28:51] 2025-11-26 00:28:08,925 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3277.1759062499996
[2025-11-25 19:28:51] 2025-11-26 00:28:08,935 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895386973/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 19:28:51] 2025-11-26 00:28:08,935 | INFO     | extracted standard info from prmon json
[2025-11-25 19:28:51] 2025-11-26 00:28:08,935 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 19:28:51] 2025-11-26 00:28:08,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 19:28:51] 2025-11-26 00:28:08,952 | INFO     | fitting pss+swap vs Time
[2025-11-25 19:28:51] 2025-11-26 00:28:08,954 | INFO     | sum of square deviations: 447417232435.9689
[2025-11-25 19:28:51] 2025-11-26 00:28:08,979 | INFO     | sum of deviations: 6264901438957.63
[2025-11-25 19:28:51] 2025-11-26 00:28:08,980 | INFO     | mean x: 1764082409.6053097
[2025-11-25 19:28:51] 2025-11-26 00:28:08,980 | INFO     | mean y: 3425547.6628318583
[2025-11-25 19:28:51] 2025-11-26 00:28:08,980 | INFO     | intersect: -24697908297.268597
[2025-11-25 19:28:51] 2025-11-26 00:28:08,982 | INFO     | chi2: 9.884383541295875
[2025-11-25 19:28:51] 2025-11-26 00:28:08,983 | INFO     | sum of square deviations: 441504950553.4361
[2025-11-25 19:28:51] 2025-11-26 00:28:09,007 | INFO     | sum of deviations: 6624151346896.289
[2025-11-25 19:28:51] 2025-11-26 00:28:09,007 | INFO     | mean x: 1764082257.1137779
[2025-11-25 19:28:51] 2025-11-26 00:28:09,007 | INFO     | mean y: 3434808.0915555554
[2025-11-25 19:28:51] 2025-11-26 00:28:09,007 | INFO     | intersect: -26464100481.938572
[2025-11-25 19:28:51] 2025-11-26 00:28:09,008 | INFO     | chi2: 7.623607880164805
[2025-11-25 19:28:51] 2025-11-26 00:28:09,008 | INFO     | current chi2=7.623607880164805 (change=22.872196851587116 %)
[2025-11-25 19:28:51] 2025-11-26 00:28:09,008 | INFO     | right removable region: 1124
[2025-11-25 19:28:51] 2025-11-26 00:28:09,010 | INFO     | sum of square deviations: 441503568046.20825
[2025-11-25 19:28:51] 2025-11-26 00:28:09,034 | INFO     | sum of deviations: 5770771961057.108
[2025-11-25 19:28:51] 2025-11-26 00:28:09,034 | INFO     | mean x: 1764082562.1146667
[2025-11-25 19:28:51] 2025-11-26 00:28:09,035 | INFO     | mean y: 3438287.8364444445
[2025-11-25 19:28:51] 2025-11-26 00:28:09,035 | INFO     | intersect: -23054400704.249893
[2025-11-25 19:28:51] 2025-11-26 00:28:09,036 | INFO     | chi2: 6.470589256529331
[2025-11-25 19:28:51] 2025-11-26 00:28:09,036 | INFO     | current chi2=6.470589256529331 (change=34.53725030503 %)
[2025-11-25 19:28:51] 2025-11-26 00:28:09,037 | INFO     | sum of square deviations: 435642230218.7493
[2025-11-25 19:28:51] 2025-11-26 00:28:09,062 | INFO     | sum of deviations: 5305488973331.194
[2025-11-25 19:28:51] 2025-11-26 00:28:09,062 | INFO     | mean x: 1764082714.6241071
[2025-11-25 19:28:51] 2025-11-26 00:28:09,062 | INFO     | mean y: 3450391.444642857
[2025-11-25 19:28:51] 2025-11-26 00:28:09,062 | INFO     | intersect: -21480512230.321293
[2025-11-25 19:28:51] 2025-11-26 00:28:09,063 | INFO     | chi2: 3.5585382431593455
[2025-11-25 19:28:51] 2025-11-26 00:28:09,063 | INFO     | current chi2=3.5585382431593455 (change=45.00441764915765 %)
[2025-11-25 19:28:51] 2025-11-26 00:28:09,064 | INFO     | sum of square deviations: 429833259316.1441
[2025-11-25 19:28:51] 2025-11-26 00:28:09,088 | INFO     | sum of deviations: 5065289099030.003
[2025-11-25 19:28:51] 2025-11-26 00:28:09,089 | INFO     | mean x: 1764082867.130045
[2025-11-25 19:28:51] 2025-11-26 00:28:09,089 | INFO     | mean y: 3456691.220627803
[2025-11-25 19:28:51] 2025-11-26 00:28:09,089 | INFO     | intersect: -20785045647.74623
[2025-11-25 19:28:51] 2025-11-26 00:28:09,090 | INFO     | chi2: 2.8554567244518383
[2025-11-25 19:28:51] 2025-11-26 00:28:09,090 | INFO     | current chi2=2.8554567244518383 (change=19.75759344610265 %)
[2025-11-25 19:28:51] 2025-11-26 00:28:09,090 | INFO     | left removable region: 30
[2025-11-25 19:28:51] 2025-11-26 00:28:09,091 | INFO     | sum of square deviations: 406000747551.39246
[2025-11-25 19:28:51] 2025-11-26 00:28:09,114 | INFO     | sum of deviations: 5127566112721.313
[2025-11-25 19:28:51] 2025-11-26 00:28:09,115 | INFO     | mean x: 1764083141.654479
[2025-11-25 19:28:51] 2025-11-26 00:28:09,115 | INFO     | mean y: 3475988.0987202926
[2025-11-25 19:28:51] 2025-11-26 00:28:09,115 | INFO     | intersect: -22275923721.689907
[2025-11-25 19:28:51] 2025-11-26 00:28:09,116 | INFO     | chi2: 0.34662451587925247
[2025-11-25 19:28:51] 2025-11-26 00:28:09,116 | INFO     | current memory leak: 12.63 B/s (using 1094 data points, chi2=0.35)
[2025-11-25 19:28:51] 2025-11-26 00:28:09,117 | INFO     | could have reported an average CPU frequency of 3272 MHz (41 samples)
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | ..............................
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | . Timing measurements:
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | . get job = 0 s
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | . initial setup = 7 s
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | . payload setup = 11 s
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | . stage-in = 0 s
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | . payload execution = 68912 s
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | . stage-out = 3 s
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | . log creation = 0 s
[2025-11-25 19:28:51] 2025-11-26 00:28:09,118 | INFO     | ..............................
[2025-11-25 19:28:51] 2025-11-26 00:28:09,188 | INFO     | 
[2025-11-25 19:28:51] 2025-11-26 00:28:09,188 | INFO     | job summary report
[2025-11-25 19:28:51] 2025-11-26 00:28:09,188 | INFO     | --------------------------------------------------
[2025-11-25 19:28:51] 2025-11-26 00:28:09,188 | INFO     | PanDA job id: 6895386973
[2025-11-25 19:28:51] 2025-11-26 00:28:09,188 | INFO     | task id: 47556149
[2025-11-25 19:28:51] 2025-11-26 00:28:09,188 | INFO     | errors: (none)
[2025-11-25 19:28:51] 2025-11-26 00:28:09,188 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 19:28:51] 2025-11-26 00:28:09,188 | INFO     | pilot state: finished 
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | transexitcode: 0
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | exeerrorcode: 0
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | exeerrordiag: 
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | exitcode: 0
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | exitmsg: OK
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | cpuconsumptiontime: 198828 s
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | nevents: 1000
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | neventsw: 0
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | pid: 395279
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | pgrp: 395279
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | corecount: 12
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | event service: False
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | sizes: {0: 2284310, 11: 2284600, 22: 2284600, 68927: 2341312, 68931: 2350367, 68936: 2350653}
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | --------------------------------------------------
[2025-11-25 19:28:51] 2025-11-26 00:28:09,189 | INFO     | 
[2025-11-25 19:28:51] 2025-11-26 00:28:09,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 19:28:51] 2025-11-26 00:28:09,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,211 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,211 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,211 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 19:28:51] 2025-11-26 00:28:09,212 | INFO     | job 6895386973 has completed (purged errors)
[2025-11-25 19:28:51] 2025-11-26 00:28:09,213 | INFO     | overall cleanup function is called
[2025-11-25 19:28:51] 2025-11-26 00:28:10,234 | INFO     | --- collectZombieJob: --- 10, [395279]
[2025-11-25 19:28:51] 2025-11-26 00:28:10,234 | INFO     | zombie collector waiting for pid 395279
[2025-11-25 19:28:51] 2025-11-26 00:28:10,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 19:28:51] 2025-11-26 00:28:10,235 | INFO     | collected zombie processes
[2025-11-25 19:28:51] 2025-11-26 00:28:10,235 | INFO     | will attempt to kill all subprocesses of pid=395279
[2025-11-25 19:28:51] 2025-11-26 00:28:10,530 | INFO     | process IDs to be killed: [395279] (in reverse order)
[2025-11-25 19:28:51] 2025-11-26 00:28:10,647 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 19:28:51] 2025-11-26 00:28:10,647 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 19:28:51] 2025-11-26 00:28:10,661 | INFO     | did not find any defunct processes belonging to 395279
[2025-11-25 19:28:51] 2025-11-26 00:28:10,673 | INFO     | did not find any defunct processes belonging to 395279
[2025-11-25 19:28:51] 2025-11-26 00:28:10,674 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 19:28:51] 2025-11-26 00:28:10,675 | INFO     | ready for new job
[2025-11-25 19:28:51] 2025-11-26 00:28:10,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 19:28:51] 2025-11-26 00:28:10,681 | INFO     | ***************************************
[2025-11-25 19:28:51] 2025-11-26 00:28:10,681 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 19:28:51] 2025-11-26 00:28:10,681 | INFO     | ***************************************
[2025-11-25 19:28:51] 2025-11-26 00:28:10,681 | INFO     | 
[2025-11-25 19:28:51] 2025-11-26 00:28:10,685 | INFO     | architecture information:
[2025-11-25 19:28:51] 2025-11-26 00:28:10,685 | INFO     | executing command: cat /etc/os-release
[2025-11-25 19:28:51] 2025-11-26 00:28:10,705 | INFO     | cat /etc/os-release:
[2025-11-25 19:28:51] NAME="CentOS Linux"
[2025-11-25 19:28:51] VERSION="7 (Core)"
[2025-11-25 19:28:51] ID="centos"
[2025-11-25 19:28:51] ID_LIKE="rhel fedora"
[2025-11-25 19:28:51] VERSION_ID="7"
[2025-11-25 19:28:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 19:28:51] ANSI_COLOR="0;31"
[2025-11-25 19:28:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 19:28:51] HOME_URL="https://www.centos.org/"
[2025-11-25 19:28:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 19:28:51] 
[2025-11-25 19:28:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 19:28:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 19:28:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 19:28:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 19:28:51] 
[2025-11-25 19:28:51] 2025-11-26 00:28:10,705 | INFO     | ***************************************
[2025-11-25 19:28:51] 2025-11-26 00:28:11,208 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 19:28:51] 2025-11-26 00:28:11,227 | INFO     | sufficient remaining disk space (80990961664 B)
[2025-11-25 19:28:51] 2025-11-26 00:28:11,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 19:28:51] 2025-11-26 00:28:11,228 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 19:28:51] 2025-11-26 00:28:11,228 | INFO     | update_server=False
[2025-11-25 19:28:51] 2025-11-26 00:28:11,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 19:28:51] 2025-11-26 00:28:11,379 | INFO     | all payload control threads have been joined
[2025-11-25 19:28:51] 2025-11-26 00:28:11,693 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 19:28:51] 2025-11-26 00:28:11,782 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:28:51] 2025-11-26 00:28:11,783 | INFO     | aborting loop
[2025-11-25 19:28:51] 2025-11-26 00:28:11,924 | INFO     | all job control threads have been joined
[2025-11-25 19:28:51] 2025-11-26 00:28:12,230 | INFO     | all data control threads have been joined
[2025-11-25 19:28:51] 2025-11-26 00:28:12,233 | INFO     | [job] retrieve thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:12,295 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:12,299 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:12,361 | INFO     | [payload] failed_post thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:12,385 | INFO     | [payload] control thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:12,491 | INFO     | [job] validate thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:12,627 | INFO     | [payload] validate_post thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:12,787 | INFO     | [job] job monitor thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:12,929 | INFO     | [job] control thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:13,235 | INFO     | [data] control thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:13,340 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:13,482 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:13,572 | INFO     | [data] copytool_in thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:13,698 | INFO     | [data] copytool_out thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:14,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 19:28:51] 2025-11-26 00:28:14,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 19:28:51] 2025-11-26 00:28:15,205 | INFO     | [job] queue monitor thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:18,278 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 19:28:51] 2025-11-26 00:28:41,715 | INFO     | PID=387206 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 19:28:51] 2025-11-26 00:28:41,715 | INFO     | .. there are 19 such processes running
[2025-11-25 19:28:51] 2025-11-26 00:28:41,715 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 19:28:51] 2025-11-26 00:28:41,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 19:28:51] 2025-11-26 00:28:41,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 19:28:51] 2025-11-26 00:28:44,586 | INFO     | [monitor] cgroup control has ended
[2025-11-25 19:28:51] 2025-11-26 00:28:46,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601657218880)>', '<ExcThread(monitor, started 140600502376192)>']
[2025-11-25 19:28:51] 2025-11-26 00:28:46,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 19:28:51] 2025-11-26 00:28:46,741 | INFO     | [monitor] control thread has ended
[2025-11-25 19:28:51] 2025-11-26 00:28:51,493 | INFO     | all workflow threads have been joined
[2025-11-25 19:28:51] 2025-11-26 00:28:51,493 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 19:28:51] 2025-11-26 00:28:51,493 | INFO     | traces error code: 0
[2025-11-25 19:28:51] 2025-11-26 00:28:51,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 19:28:51] 2025-11-26 00:28:51,675 [wrapper] ==== pilot stdout END ====
[2025-11-25 19:28:51] 2025-11-26 00:28:51,678 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 19:28:51] 2025-11-26 00:28:51,681 [wrapper] pilotpid: 387206
[2025-11-25 19:28:51] 2025-11-26 00:28:51,684 [wrapper] Pilot exit status: 0
[2025-11-25 19:28:51] 2025-11-26 00:28:51,699 [wrapper] pandaids: 6895386973
[2025-11-25 19:28:51] 2025-11-26 00:28:51,775 [wrapper] cleanup supervisor_pilot 3176430 387207
[2025-11-25 19:28:51] 2025-11-26 00:28:51,779 [wrapper] Test setup, not cleaning
[2025-11-25 19:28:51] 2025-11-26 00:28:51,783 [wrapper] apfmon messages muted
[2025-11-25 19:28:51] 2025-11-26 00:28:51,786 [wrapper] ==== wrapper stdout END ====
[2025-11-25 19:28:51] 2025-11-26 00:28:51,788 [wrapper] ==== wrapper stderr END ====
[2025-11-25 19:28:51]  *** Error codes and diagnostics ***
[2025-11-25 19:28:51]     "exeErrorCode": 0,
[2025-11-25 19:28:51]     "exeErrorDiag": "",
[2025-11-25 19:28:51]     "pilotErrorCode": 0,
[2025-11-25 19:28:51]     "pilotErrorDiag": "",
[2025-11-25 19:28:51]  *** Listing of results directory ***
[2025-11-25 19:28:51] total 1332636
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 01:19 queuedata.json
[2025-11-25 19:28:51] -rwx------. 1 boincer umatlas     36292 Nov 24 01:20 runpilot2-wrapper.sh
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 01:20 pilot3.tar.gz
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 19:28:51] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:18 run_atlas
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:18 job.xml
[2025-11-25 19:28:51] -rw-r--r--. 2 boincer umatlas 408206275 Nov 25 00:18 EVNT.47483658._001256.pool.root.1
[2025-11-25 19:28:51] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 00:18 input.tar.gz
[2025-11-25 19:28:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:18 start_atlas.sh
[2025-11-25 19:28:51] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:18 shared
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:18 boinc_lockfile
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:18 pandaJob.out
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas        57 Nov 25 00:18 setup.sh.local
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas    991801 Nov 25 00:18 agis_schedconf.cvmfs.json
[2025-11-25 19:28:51] drwx------. 5 boincer umatlas      4096 Nov 25 00:18 pilot3
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas       533 Nov 25 19:14 boinc_task_state.xml
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas 928666277 Nov 25 19:27 HITS.47556149._002424.pool.root.1
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas      6901 Nov 25 19:27 init_data.xml
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas        95 Nov 25 19:27 pilot_heartbeat.json
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas      1051 Nov 25 19:27 memory_monitor_summary.json
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas   1516240 Nov 25 19:28 agis_ddmendpoints.agis.ALL.json
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas   2707937 Nov 25 19:28 log.47556149._002424.job.log.tgz.1
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas      8584 Nov 25 19:28 heartbeat.json
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 19:28 boinc_mmap_file
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas        29 Nov 25 19:28 wrapper_checkpoint.txt
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas      4823 Nov 25 19:28 pilotlog.txt
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas   9202642 Nov 25 19:28 log.47556149._002424.job.log.1
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas       353 Nov 25 19:28 output.list
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas       620 Nov 25 19:28 runtime_log
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas  11929600 Nov 25 19:28 result.tar.gz
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas      9345 Nov 25 19:28 runtime_log.err
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas       662 Nov 25 19:28 ayJODmm6eh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVVLKDmjsvyKm.diag
[2025-11-25 19:28:51] -rw-r--r--. 1 boincer umatlas     21306 Nov 25 19:28 stderr.txt
[2025-11-25 19:28:51] HITS file was successfully produced:
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas 928666277 Nov 25 19:27 shared/HITS.pool.root.1
[2025-11-25 19:28:51]  *** Contents of shared directory: ***
[2025-11-25 19:28:51] total 1317800
[2025-11-25 19:28:51] -rw-r--r--. 2 boincer umatlas 408206275 Nov 25 00:18 ATLAS.root_0
[2025-11-25 19:28:51] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 00:18 input.tar.gz
[2025-11-25 19:28:51] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:18 start_atlas.sh
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas 928666277 Nov 25 19:27 HITS.pool.root.1
[2025-11-25 19:28:51] -rw-------. 1 boincer umatlas  11929600 Nov 25 19:28 result.tar.gz
19:29:13 (383537): run_atlas exited; CPU time 198185.769308
19:29:13 (383537): called boinc_finish(0)

</stderr_txt>
]]>

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