Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:28:26 (1232118): wrapper (7.7.26015): starting
11:28:26 (1232118): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:28:26] Arguments: --nthreads 8
[2025-11-26 11:28:26] Threads: 8
[2025-11-26 11:28:26] Checking for CVMFS
[2025-11-26 11:28:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:28:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:28:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:28:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:28:27] 2.13.2.0 540105 5389 48860 153320 3 80 3338497 4096001 0 130560 0 1925604 99.979 192786 608 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 11:28:27] CVMFS is ok
[2025-11-26 11:28:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:28:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:28:27] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 11:28:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 11:28:27] Further information can be found at the LHC@home message board.
[2025-11-26 11:28:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:28:27] Checking for apptainer binary...
[2025-11-26 11:28:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:28:27] Running /usr/bin/apptainer --version
[2025-11-26 11:28:27] apptainer version 1.4.3
[2025-11-26 11:28:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:28:28] lab01ubuntu
[2025-11-26 11:28:28] apptainer works
[2025-11-26 11:28:28] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:28:28] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:28:28] Starting ATLAS job with PandaID=6895386995
[2025-11-26 11:28:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:33:13]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:33:13] 2025-11-26 21:32:32,260 | INFO     | monitor loop #2736: job 0:6895386995 is in state 'finished'
[2025-11-26 21:33:13] 2025-11-26 21:32:32,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:33:13] 2025-11-26 21:32:33,261 | INFO     | time since job start (36210s) is within the limit (172800.0s)
[2025-11-26 21:33:13] 2025-11-26 21:32:34,834 | INFO     | monitor loop #2737: job 0:6895386995 is in state 'finished'
[2025-11-26 21:33:13] 2025-11-26 21:32:34,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:33:13] 2025-11-26 21:32:35,268 | INFO     | time since job start (36212s) is within the limit (172800.0s)
[2025-11-26 21:33:13] 2025-11-26 21:32:37,274 | INFO     | time since job start (36214s) is within the limit (172800.0s)
[2025-11-26 21:33:13] 2025-11-26 21:32:37,338 | INFO     | monitor loop #2738: job 0:6895386995 is in state 'finished'
[2025-11-26 21:33:13] 2025-11-26 21:32:37,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,280 | INFO     | time since job start (36216s) is within the limit (172800.0s)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,547 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 21:33:13] 2025-11-26 21:32:39,549 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 2893.0279999999993
[2025-11-26 21:33:13] 2025-11-26 21:32:39,553 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6895386995/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,555 | INFO     | extracted standard info from prmon json
[2025-11-26 21:33:13] 2025-11-26 21:32:39,555 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:33:13] 2025-11-26 21:32:39,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:33:13] 2025-11-26 21:32:39,577 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:33:13] 2025-11-26 21:32:39,579 | INFO     | sum of square deviations: 64660818011.99303
[2025-11-26 21:33:13] 2025-11-26 21:32:39,596 | INFO     | sum of deviations: 637300560043.4988
[2025-11-26 21:33:13] 2025-11-26 21:32:39,597 | INFO     | mean x: 1764174661.0033727
[2025-11-26 21:33:13] 2025-11-26 21:32:39,597 | INFO     | mean y: 2857314.750421585
[2025-11-26 21:33:13] 2025-11-26 21:32:39,597 | INFO     | intersect: -17384944665.476097
[2025-11-26 21:33:13] 2025-11-26 21:32:39,599 | INFO     | chi2: 13.397960968740096
[2025-11-26 21:33:13] 2025-11-26 21:32:39,601 | INFO     | sum of square deviations: 63038964956.993126
[2025-11-26 21:33:13] 2025-11-26 21:32:39,620 | INFO     | sum of deviations: 831254915624.0756
[2025-11-26 21:33:13] 2025-11-26 21:32:39,621 | INFO     | mean x: 1764174508.5034013
[2025-11-26 21:33:13] 2025-11-26 21:32:39,621 | INFO     | mean y: 2875548.212585034
[2025-11-26 21:33:13] 2025-11-26 21:32:39,621 | INFO     | intersect: -23260176648.355217
[2025-11-26 21:33:13] 2025-11-26 21:32:39,623 | INFO     | chi2: 10.287801523410458
[2025-11-26 21:33:13] 2025-11-26 21:32:39,623 | INFO     | current chi2=10.287801523410458 (change=23.213677458728316 %)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,623 | INFO     | right removable region: 587
[2025-11-26 21:33:13] 2025-11-26 21:32:39,625 | INFO     | sum of square deviations: 63038963736.993126
[2025-11-26 21:33:13] 2025-11-26 21:32:39,642 | INFO     | sum of deviations: 423354246208.2584
[2025-11-26 21:33:13] 2025-11-26 21:32:39,642 | INFO     | mean x: 1764174813.5034013
[2025-11-26 21:33:13] 2025-11-26 21:32:39,642 | INFO     | mean y: 2877421.870748299
[2025-11-26 21:33:13] 2025-11-26 21:32:39,643 | INFO     | intersect: -11844888690.947529
[2025-11-26 21:33:13] 2025-11-26 21:32:39,644 | INFO     | chi2: 9.913234239286346
[2025-11-26 21:33:13] 2025-11-26 21:32:39,645 | INFO     | current chi2=9.913234239286346 (change=26.00938111093365 %)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,646 | INFO     | sum of square deviations: 61444458811.99308
[2025-11-26 21:33:13] 2025-11-26 21:32:39,662 | INFO     | sum of deviations: 256755269950.74667
[2025-11-26 21:33:13] 2025-11-26 21:32:39,662 | INFO     | mean x: 1764174966.0034306
[2025-11-26 21:33:13] 2025-11-26 21:32:39,663 | INFO     | mean y: 2893352.626072041
[2025-11-26 21:33:13] 2025-11-26 21:32:39,663 | INFO     | intersect: -7368987340.839301
[2025-11-26 21:33:13] 2025-11-26 21:32:39,665 | INFO     | chi2: 7.939865772092377
[2025-11-26 21:33:13] 2025-11-26 21:32:39,665 | INFO     | current chi2=7.939865772092377 (change=19.90640410143312 %)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,665 | INFO     | left removable region: 20
[2025-11-26 21:33:13] 2025-11-26 21:32:39,667 | INFO     | sum of square deviations: 56523123259.99305
[2025-11-26 21:33:13] 2025-11-26 21:32:39,682 | INFO     | sum of deviations: 337839323107.0599
[2025-11-26 21:33:13] 2025-11-26 21:32:39,682 | INFO     | mean x: 1764175088.0035274
[2025-11-26 21:33:13] 2025-11-26 21:32:39,683 | INFO     | mean y: 2932146.9700176367
[2025-11-26 21:33:13] 2025-11-26 21:32:39,683 | INFO     | intersect: -10541561561.06438
[2025-11-26 21:33:13] 2025-11-26 21:32:39,683 | INFO     | chi2: 2.7104793730925074
[2025-11-26 21:33:13] 2025-11-26 21:32:39,683 | INFO     | current memory leak: 5.98 B/s (using 567 data points, chi2=2.71)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,684 | INFO     | could have reported an average CPU frequency of 2893 MHz (23 samples)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,684 | INFO     | ..............................
[2025-11-26 21:33:13] 2025-11-26 21:32:39,684 | INFO     | . Timing measurements:
[2025-11-26 21:33:13] 2025-11-26 21:32:39,684 | INFO     | . get job = 0 s
[2025-11-26 21:33:13] 2025-11-26 21:32:39,684 | INFO     | . initial setup = 4 s
[2025-11-26 21:33:13] 2025-11-26 21:32:39,685 | INFO     | . payload setup = 17 s
[2025-11-26 21:33:13] 2025-11-26 21:32:39,685 | INFO     | . stage-in = 0 s
[2025-11-26 21:33:13] 2025-11-26 21:32:39,685 | INFO     | . payload execution = 36140 s
[2025-11-26 21:33:13] 2025-11-26 21:32:39,685 | INFO     | . stage-out = 4 s
[2025-11-26 21:33:13] 2025-11-26 21:32:39,685 | INFO     | . log creation = 0 s
[2025-11-26 21:33:13] 2025-11-26 21:32:39,685 | INFO     | ..............................
[2025-11-26 21:33:13] 2025-11-26 21:32:39,761 | INFO     | 
[2025-11-26 21:33:13] 2025-11-26 21:32:39,762 | INFO     | job summary report
[2025-11-26 21:33:13] 2025-11-26 21:32:39,762 | INFO     | --------------------------------------------------
[2025-11-26 21:33:13] 2025-11-26 21:32:39,762 | INFO     | PanDA job id: 6895386995
[2025-11-26 21:33:13] 2025-11-26 21:32:39,763 | INFO     | task id: 47556149
[2025-11-26 21:33:13] 2025-11-26 21:32:39,763 | INFO     | errors: (none)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,763 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:33:13] 2025-11-26 21:32:39,764 | INFO     | pilot state: finished 
[2025-11-26 21:33:13] 2025-11-26 21:32:39,764 | INFO     | transexitcode: 0
[2025-11-26 21:33:13] 2025-11-26 21:32:39,764 | INFO     | exeerrorcode: 0
[2025-11-26 21:33:13] 2025-11-26 21:32:39,764 | INFO     | exeerrordiag: 
[2025-11-26 21:33:13] 2025-11-26 21:32:39,765 | INFO     | exitcode: 0
[2025-11-26 21:33:13] 2025-11-26 21:32:39,765 | INFO     | exitmsg: OK
[2025-11-26 21:33:13] 2025-11-26 21:32:39,765 | INFO     | cpuconsumptiontime: 276148 s
[2025-11-26 21:33:13] 2025-11-26 21:32:39,766 | INFO     | nevents: 1000
[2025-11-26 21:33:13] 2025-11-26 21:32:39,766 | INFO     | neventsw: 0
[2025-11-26 21:33:13] 2025-11-26 21:32:39,766 | INFO     | pid: 1242261
[2025-11-26 21:33:13] 2025-11-26 21:32:39,766 | INFO     | pgrp: 1242261
[2025-11-26 21:33:13] 2025-11-26 21:32:39,767 | INFO     | corecount: 8
[2025-11-26 21:33:13] 2025-11-26 21:32:39,767 | INFO     | event service: False
[2025-11-26 21:33:13] 2025-11-26 21:32:39,767 | INFO     | sizes: {0: 2284151, 1: 2284350, 12: 2284350, 13: 2284640, 23: 2284696, 36162: 2326601, 36168: 2335665, 36183: 2335855}
[2025-11-26 21:33:13] 2025-11-26 21:32:39,767 | INFO     | --------------------------------------------------
[2025-11-26 21:33:13] 2025-11-26 21:32:39,768 | INFO     | 
[2025-11-26 21:33:13] 2025-11-26 21:32:39,768 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-26 21:33:13] 2025-11-26 21:32:39,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,813 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,813 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,814 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,818 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,819 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:33:13] 2025-11-26 21:32:39,819 | INFO     | job 6895386995 has completed (purged errors)
[2025-11-26 21:33:13] 2025-11-26 21:32:39,820 | INFO     | overall cleanup function is called
[2025-11-26 21:33:13] 2025-11-26 21:32:40,851 | INFO     | --- collectZombieJob: --- 10, [1242261]
[2025-11-26 21:33:13] 2025-11-26 21:32:40,852 | INFO     | zombie collector waiting for pid 1242261
[2025-11-26 21:33:13] 2025-11-26 21:32:40,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:33:13] 2025-11-26 21:32:40,853 | INFO     | collected zombie processes
[2025-11-26 21:33:13] 2025-11-26 21:32:40,854 | INFO     | will attempt to kill all subprocesses of pid=1242261
[2025-11-26 21:33:13] 2025-11-26 21:32:41,032 | INFO     | process IDs to be killed: [1242261] (in reverse order)
[2025-11-26 21:33:13] 2025-11-26 21:32:41,122 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:33:13] 2025-11-26 21:32:41,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:33:13] 2025-11-26 21:32:41,127 | INFO     | did not find any defunct processes belonging to 1242261
[2025-11-26 21:33:13] 2025-11-26 21:32:41,132 | INFO     | did not find any defunct processes belonging to 1242261
[2025-11-26 21:33:13] 2025-11-26 21:32:41,136 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:33:13] 2025-11-26 21:32:41,137 | INFO     | ready for new job
[2025-11-26 21:33:13] 2025-11-26 21:32:41,137 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:33:13] 2025-11-26 21:32:41,144 | INFO     | ***************************************
[2025-11-26 21:33:13] 2025-11-26 21:32:41,144 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:33:13] 2025-11-26 21:32:41,145 | INFO     | ***************************************
[2025-11-26 21:33:13] 2025-11-26 21:32:41,145 | INFO     | 
[2025-11-26 21:33:13] 2025-11-26 21:32:41,146 | INFO     | pilot is running in a VM
[2025-11-26 21:33:13] 2025-11-26 21:32:41,146 | INFO     | architecture information:
[2025-11-26 21:33:13] 2025-11-26 21:32:41,148 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:33:13] 2025-11-26 21:32:41,179 | INFO     | cat /etc/os-release:
[2025-11-26 21:33:13] NAME="CentOS Linux"
[2025-11-26 21:33:13] VERSION="7 (Core)"
[2025-11-26 21:33:13] ID="centos"
[2025-11-26 21:33:13] ID_LIKE="rhel fedora"
[2025-11-26 21:33:13] VERSION_ID="7"
[2025-11-26 21:33:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:33:13] ANSI_COLOR="0;31"
[2025-11-26 21:33:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:33:13] HOME_URL="https://www.centos.org/"
[2025-11-26 21:33:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:33:13] 
[2025-11-26 21:33:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:33:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:33:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:33:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:33:13] 
[2025-11-26 21:33:13] 2025-11-26 21:32:41,180 | INFO     | ***************************************
[2025-11-26 21:33:13] 2025-11-26 21:32:41,684 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-26 21:33:13] 2025-11-26 21:32:41,721 | INFO     | sufficient remaining disk space (14105444352 B)
[2025-11-26 21:33:13] 2025-11-26 21:32:41,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:33:13] 2025-11-26 21:32:41,722 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:33:13] 2025-11-26 21:32:41,723 | INFO     | update_server=False
[2025-11-26 21:33:13] 2025-11-26 21:32:41,723 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:33:13] 2025-11-26 21:32:41,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:33:13] 2025-11-26 21:32:41,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:33:13] 2025-11-26 21:32:41,725 | INFO     | aborting loop
[2025-11-26 21:33:13] 2025-11-26 21:32:41,759 | INFO     | all payload control threads have been joined
[2025-11-26 21:33:13] 2025-11-26 21:32:41,853 | INFO     | all job control threads have been joined
[2025-11-26 21:33:13] 2025-11-26 21:32:42,439 | INFO     | all data control threads have been joined
[2025-11-26 21:33:13] 2025-11-26 21:32:42,709 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:33:13] 2025-11-26 21:32:42,729 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:42,730 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:42,731 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:42,765 | INFO     | [payload] control thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:42,859 | INFO     | [job] control thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:42,882 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:42,893 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:42,899 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:43,393 | INFO     | [job] validate thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:43,430 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:43,445 | INFO     | [data] control thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:43,486 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:43,740 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:43,888 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:44,357 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:33:13] 2025-11-26 21:32:44,715 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:32:48,364 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:33:13] 2025-11-26 21:33:01,837 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:33:13] 2025-11-26 21:33:02,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129100312221504)>', '<ExcThread(monitor, started 129099561412352)>']
[2025-11-26 21:33:13] 2025-11-26 21:33:07,066 | INFO     | all workflow threads have been joined
[2025-11-26 21:33:13] 2025-11-26 21:33:07,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:33:13] 2025-11-26 21:33:07,073 | INFO     | traces error code: 0
[2025-11-26 21:33:13] 2025-11-26 21:33:07,074 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:33:13] 2025-11-26 21:33:12,472 | INFO     | PID=1235842 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:33:13] 2025-11-26 21:33:12,482 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:33:13] 2025-11-26 21:33:12,482 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:33:13] 2025-11-26 21:33:12,482 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:33:13] 2025-11-26 21:33:12,483 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:33:13] 2025-11-26 21:33:12,483 | INFO     | [monitor] control thread has ended
[2025-11-26 21:33:13] 2025-11-26 21:33:12,689 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:33:13] 2025-11-26 21:33:12,696 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:33:13] 2025-11-26 21:33:12,704 [wrapper] pilotpid: 1235842
[2025-11-26 21:33:13] 2025-11-26 21:33:12,712 [wrapper] Pilot exit status: 0
[2025-11-26 21:33:13] 2025-11-26 21:33:12,735 [wrapper] pandaids: 6895386995
[2025-11-26 21:33:13] 2025-11-26 21:33:12,800 [wrapper] cleanup supervisor_pilot 1306524 1235843
[2025-11-26 21:33:13] 2025-11-26 21:33:12,808 [wrapper] Test setup, not cleaning
[2025-11-26 21:33:13] 2025-11-26 21:33:12,817 [wrapper] apfmon messages muted
[2025-11-26 21:33:13] 2025-11-26 21:33:12,825 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:33:13] 2025-11-26 21:33:12,833 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:33:13]  *** Error codes and diagnostics ***
[2025-11-26 21:33:13]     "exeErrorCode": 0,
[2025-11-26 21:33:13]     "exeErrorDiag": "",
[2025-11-26 21:33:13]     "pilotErrorCode": 0,
[2025-11-26 21:33:13]     "pilotErrorDiag": "",
[2025-11-26 21:33:13]  *** Listing of results directory ***
[2025-11-26 21:33:13] total 1323804
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc    576529 Nov 24 06:20 pilot3.tar.gz
[2025-11-26 21:33:13] -rwx------ 1 boinc boinc     36292 Nov 24 06:26 runpilot2-wrapper.sh
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc      5112 Nov 24 06:26 queuedata.json
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc       100 Nov 26 11:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:33:13] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 11:28 run_atlas
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc       105 Nov 26 11:28 job.xml
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc      6316 Nov 26 11:28 init_data.xml
[2025-11-26 21:33:13] -rw-r--r-- 2 boinc boinc 409456063 Nov 26 11:28 EVNT.47483658._001258.pool.root.1
[2025-11-26 21:33:13] -rw-r--r-- 2 boinc boinc     15847 Nov 26 11:28 start_atlas.sh
[2025-11-26 21:33:13] drwxrwx--x 2 boinc boinc      4096 Nov 26 11:28 shared
[2025-11-26 21:33:13] -rw-r--r-- 2 boinc boinc    590105 Nov 26 11:28 input.tar.gz
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc         0 Nov 26 11:28 boinc_lockfile
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc      2786 Nov 26 11:28 pandaJob.out
[2025-11-26 21:33:13] -rw------- 1 boinc boinc    991830 Nov 26 11:28 agis_schedconf.cvmfs.json
[2025-11-26 21:33:13] drwx------ 5 boinc boinc      4096 Nov 26 11:29 pilot3
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc       532 Nov 26 21:18 boinc_task_state.xml
[2025-11-26 21:33:13] -rw------- 1 boinc boinc 928196537 Nov 26 21:31 HITS.47556149._002446.pool.root.1
[2025-11-26 21:33:13] -rw------- 1 boinc boinc        95 Nov 26 21:32 pilot_heartbeat.json
[2025-11-26 21:33:13] -rw------- 1 boinc boinc      1030 Nov 26 21:32 memory_monitor_summary.json
[2025-11-26 21:33:13] -rw------- 1 boinc boinc   1516240 Nov 26 21:32 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:33:13] -rw------- 1 boinc boinc   1867725 Nov 26 21:32 log.47556149._002446.job.log.tgz.1
[2025-11-26 21:33:13] -rw------- 1 boinc boinc      8588 Nov 26 21:32 heartbeat.json
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc        29 Nov 26 21:33 wrapper_checkpoint.txt
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc      8192 Nov 26 21:33 boinc_mmap_file
[2025-11-26 21:33:13] -rw------- 1 boinc boinc       747 Nov 26 21:33 pilotlog.txt
[2025-11-26 21:33:13] -rw------- 1 boinc boinc   5138044 Nov 26 21:33 log.47556149._002446.job.log.1
[2025-11-26 21:33:13] -rw------- 1 boinc boinc       353 Nov 26 21:33 output.list
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc       620 Nov 26 21:33 runtime_log
[2025-11-26 21:33:13] -rw------- 1 boinc boinc   7024640 Nov 26 21:33 result.tar.gz
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc      8904 Nov 26 21:33 runtime_log.err
[2025-11-26 21:33:13] -rw------- 1 boinc boinc       656 Nov 26 21:33 K3BMDmuCfh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIxIKDm0C9zCn.diag
[2025-11-26 21:33:13] -rw-r--r-- 1 boinc boinc     21727 Nov 26 21:33 stderr.txt
[2025-11-26 21:33:13] HITS file was successfully produced:
[2025-11-26 21:33:13] -rw------- 1 boinc boinc 928196537 Nov 26 21:31 shared/HITS.pool.root.1
[2025-11-26 21:33:13]  *** Contents of shared directory: ***
[2025-11-26 21:33:13] total 1313768
[2025-11-26 21:33:13] -rw-r--r-- 2 boinc boinc 409456063 Nov 26 11:28 ATLAS.root_0
[2025-11-26 21:33:13] -rw-r--r-- 2 boinc boinc     15847 Nov 26 11:28 start_atlas.sh
[2025-11-26 21:33:13] -rw-r--r-- 2 boinc boinc    590105 Nov 26 11:28 input.tar.gz
[2025-11-26 21:33:13] -rw------- 1 boinc boinc 928196537 Nov 26 21:31 HITS.pool.root.1
[2025-11-26 21:33:13] -rw------- 1 boinc boinc   7024640 Nov 26 21:33 result.tar.gz
21:33:15 (1232118): run_atlas exited; CPU time 275767.725300
21:33:15 (1232118): called boinc_finish(0)

</stderr_txt>
]]>

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