Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:41:23 (1875452): wrapper (7.7.26015): starting
03:41:23 (1875452): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 03:41:23] Arguments: --nthreads 9
[2025-11-26 03:41:23] Threads: 9
[2025-11-26 03:41:23] Checking for CVMFS
[2025-11-26 03:41:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 03:41:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 03:41:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 03:41:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 03:41:23] 2.13.3.0 9735 29824 303744 153315 1 116 23990330 32935937 25833 16776704 0 134057087 99.752 87262451 32908 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 03:41:23] CVMFS is ok
[2025-11-26 03:41:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 03:41:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 03:41:23] Further information can be found at the LHC@home message board.
[2025-11-26 03:41:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 03:41:23] Checking for apptainer binary...
[2025-11-26 03:41:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 03:41:23] Running /usr/bin/apptainer --version
[2025-11-26 03:41:23] apptainer version 1.4.4-1.el9
[2025-11-26 03:41:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 03:41:24] c-8-15.aglt2.org
[2025-11-26 03:41:24] apptainer works
[2025-11-26 03:41:24] Set ATHENA_PROC_NUMBER=9
[2025-11-26 03:41:24] Set ATHENA_CORE_NUMBER=9
[2025-11-26 03:41:24] Starting ATLAS job with PandaID=6895356036
[2025-11-26 03:41:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:59:03]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:59:03] 2025-11-27 04:58:06,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:59:03] 2025-11-27 04:58:07,060 | INFO     | time since job start (72986s) is within the limit (172800.0s)
[2025-11-26 23:59:03] 2025-11-27 04:58:09,086 | INFO     | time since job start (72988s) is within the limit (172800.0s)
[2025-11-26 23:59:03] 2025-11-27 04:58:09,105 | INFO     | monitor loop #4334: job 0:6895356036 is in state 'finished'
[2025-11-26 23:59:03] 2025-11-27 04:58:09,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:59:03] 2025-11-27 04:58:11,094 | INFO     | time since job start (72990s) is within the limit (172800.0s)
[2025-11-26 23:59:03] 2025-11-27 04:58:11,614 | INFO     | monitor loop #4335: job 0:6895356036 is in state 'finished'
[2025-11-26 23:59:03] 2025-11-27 04:58:11,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:59:03] 2025-11-27 04:58:13,113 | INFO     | time since job start (72992s) is within the limit (172800.0s)
[2025-11-26 23:59:03] 2025-11-27 04:58:14,120 | INFO     | monitor loop #4336: job 0:6895356036 is in state 'finished'
[2025-11-26 23:59:03] 2025-11-27 04:58:14,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:59:03] 2025-11-27 04:58:15,120 | INFO     | time since job start (72994s) is within the limit (172800.0s)
[2025-11-26 23:59:03] 2025-11-27 04:58:16,625 | INFO     | monitor loop #4337: job 0:6895356036 is in state 'finished'
[2025-11-26 23:59:03] 2025-11-27 04:58:16,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:59:03] 2025-11-27 04:58:17,130 | INFO     | time since job start (72996s) is within the limit (172800.0s)
[2025-11-26 23:59:03] 2025-11-27 04:58:17,806 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 23:59:03] 2025-11-27 04:58:17,874 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.179725
[2025-11-26 23:59:03] 2025-11-27 04:58:17,935 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895356036/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:59:03] 2025-11-27 04:58:17,936 | INFO     | extracted standard info from prmon json
[2025-11-26 23:59:03] 2025-11-27 04:58:17,936 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:59:03] 2025-11-27 04:58:17,936 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:59:03] 2025-11-27 04:58:17,996 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:59:03] 2025-11-27 04:58:18,002 | INFO     | sum of square deviations: 530488453601.8874
[2025-11-26 23:59:03] 2025-11-27 04:58:18,088 | INFO     | sum of deviations: 2754966856009.153
[2025-11-26 23:59:03] 2025-11-27 04:58:18,088 | INFO     | mean x: 1764182980.0510035
[2025-11-26 23:59:03] 2025-11-27 04:58:18,088 | INFO     | mean y: 3102407.83361204
[2025-11-26 23:59:03] 2025-11-27 04:58:18,088 | INFO     | intersect: -9158766441.480545
[2025-11-26 23:59:03] 2025-11-27 04:58:18,090 | INFO     | chi2: 15.392777544929604
[2025-11-26 23:59:03] 2025-11-27 04:58:18,098 | INFO     | sum of square deviations: 523863501377.92377
[2025-11-26 23:59:03] 2025-11-27 04:58:18,234 | INFO     | sum of deviations: 3182529761978.262
[2025-11-26 23:59:03] 2025-11-27 04:58:18,240 | INFO     | mean x: 1764182827.556675
[2025-11-26 23:59:03] 2025-11-27 04:58:18,240 | INFO     | mean y: 3112247.714525609
[2025-11-26 23:59:03] 2025-11-27 04:58:18,240 | INFO     | intersect: -10714497090.408924
[2025-11-26 23:59:03] 2025-11-27 04:58:18,242 | INFO     | chi2: 12.111065571357567
[2025-11-26 23:59:03] 2025-11-27 04:58:18,242 | INFO     | current chi2=12.111065571357567 (change=21.319816803647864 %)
[2025-11-26 23:59:03] 2025-11-27 04:58:18,242 | INFO     | right removable region: 1190
[2025-11-26 23:59:03] 2025-11-27 04:58:18,246 | INFO     | sum of square deviations: 523862442659.8111
[2025-11-26 23:59:03] 2025-11-27 04:58:18,333 | INFO     | sum of deviations: 2380926167866.193
[2025-11-26 23:59:03] 2025-11-27 04:58:18,333 | INFO     | mean x: 1764183132.5575147
[2025-11-26 23:59:03] 2025-11-27 04:58:18,333 | INFO     | mean y: 3111008.347607053
[2025-11-26 23:59:03] 2025-11-27 04:58:18,333 | INFO     | intersect: -8015004899.881403
[2025-11-26 23:59:03] 2025-11-27 04:58:18,335 | INFO     | chi2: 12.994921145723193
[2025-11-26 23:59:03] 2025-11-27 04:58:18,335 | INFO     | current chi2=12.994921145723193 (change=15.577801941250474 %)
[2025-11-26 23:59:03] 2025-11-27 04:58:18,335 | INFO     | left removable region: 10
[2025-11-26 23:59:03] 2025-11-27 04:58:18,342 | INFO     | sum of square deviations: 509481461026.57477
[2025-11-26 23:59:03] 2025-11-27 04:58:18,442 | INFO     | sum of deviations: 2800053303920.9634
[2025-11-26 23:59:03] 2025-11-27 04:58:18,442 | INFO     | mean x: 1764183102.0677967
[2025-11-26 23:59:03] 2025-11-27 04:58:18,442 | INFO     | mean y: 3124889.675423729
[2025-11-26 23:59:03] 2025-11-27 04:58:18,442 | INFO     | intersect: -9692628737.381098
[2025-11-26 23:59:03] 2025-11-27 04:58:18,454 | INFO     | chi2: 9.07662182279362
[2025-11-26 23:59:03] 2025-11-27 04:58:18,454 | INFO     | current memory leak: 5.50 B/s (using 1180 data points, chi2=9.08)
[2025-11-26 23:59:03] 2025-11-27 04:58:18,455 | INFO     | could have reported an average CPU frequency of 2600 MHz (43 samples)
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | ..............................
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | . Timing measurements:
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | . get job = 0 s
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | . initial setup = 2 s
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | . payload setup = 7 s
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | . stage-in = 0 s
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | . payload execution = 72923 s
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | . stage-out = 7 s
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | . log creation = 2 s
[2025-11-26 23:59:03] 2025-11-27 04:58:18,456 | INFO     | ..............................
[2025-11-26 23:59:03] 2025-11-27 04:58:18,842 | INFO     | 
[2025-11-26 23:59:03] 2025-11-27 04:58:18,842 | INFO     | job summary report
[2025-11-26 23:59:03] 2025-11-27 04:58:18,842 | INFO     | --------------------------------------------------
[2025-11-26 23:59:03] 2025-11-27 04:58:18,842 | INFO     | PanDA job id: 6895356036
[2025-11-26 23:59:03] 2025-11-27 04:58:18,843 | INFO     | task id: 47556137
[2025-11-26 23:59:03] 2025-11-27 04:58:18,843 | INFO     | errors: (none)
[2025-11-26 23:59:03] 2025-11-27 04:58:18,843 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:59:03] 2025-11-27 04:58:18,843 | INFO     | pilot state: finished 
[2025-11-26 23:59:03] 2025-11-27 04:58:18,843 | INFO     | transexitcode: 0
[2025-11-26 23:59:03] 2025-11-27 04:58:18,843 | INFO     | exeerrorcode: 0
[2025-11-26 23:59:03] 2025-11-27 04:58:18,843 | INFO     | exeerrordiag: 
[2025-11-26 23:59:03] 2025-11-27 04:58:18,843 | INFO     | exitcode: 0
[2025-11-26 23:59:03] 2025-11-27 04:58:18,844 | INFO     | exitmsg: OK
[2025-11-26 23:59:03] 2025-11-27 04:58:18,844 | INFO     | cpuconsumptiontime: 298562 s
[2025-11-26 23:59:03] 2025-11-27 04:58:18,844 | INFO     | nevents: 1000
[2025-11-26 23:59:03] 2025-11-27 04:58:18,844 | INFO     | neventsw: 0
[2025-11-26 23:59:03] 2025-11-27 04:58:18,844 | INFO     | pid: 1888073
[2025-11-26 23:59:03] 2025-11-27 04:58:18,844 | INFO     | pgrp: 1888073
[2025-11-26 23:59:03] 2025-11-27 04:58:18,844 | INFO     | corecount: 9
[2025-11-26 23:59:03] 2025-11-27 04:58:18,844 | INFO     | event service: False
[2025-11-26 23:59:03] 2025-11-27 04:58:18,844 | INFO     | sizes: {0: 2284093, 1: 2284292, 7: 2284554, 11: 2284582, 72935: 2343018, 72943: 2352040, 72944: 2352224, 72981: 2352470}
[2025-11-26 23:59:03] 2025-11-27 04:58:18,845 | INFO     | --------------------------------------------------
[2025-11-26 23:59:03] 2025-11-27 04:58:18,845 | INFO     | 
[2025-11-26 23:59:03] 2025-11-27 04:58:18,845 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 23:59:03] 2025-11-27 04:58:19,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,002 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,003 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,004 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,005 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,005 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,005 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:59:03] 2025-11-27 04:58:19,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,007 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:59:03] 2025-11-27 04:58:19,007 | INFO     | job 6895356036 has completed (purged errors)
[2025-11-26 23:59:03] 2025-11-27 04:58:19,007 | INFO     | overall cleanup function is called
[2025-11-26 23:59:03] 2025-11-27 04:58:19,561 | INFO     | PID=1880440 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:59:03] 2025-11-27 04:58:19,561 | INFO     | .. there are 40 such processes running
[2025-11-26 23:59:03] 2025-11-27 04:58:20,066 | INFO     | --- collectZombieJob: --- 10, [1888073]
[2025-11-26 23:59:03] 2025-11-27 04:58:20,066 | INFO     | zombie collector waiting for pid 1888073
[2025-11-26 23:59:03] 2025-11-27 04:58:20,066 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:59:03] 2025-11-27 04:58:20,066 | INFO     | collected zombie processes
[2025-11-26 23:59:03] 2025-11-27 04:58:20,067 | INFO     | will attempt to kill all subprocesses of pid=1888073
[2025-11-26 23:59:03] 2025-11-27 04:58:21,184 | INFO     | process IDs to be killed: [1888073] (in reverse order)
[2025-11-26 23:59:03] 2025-11-27 04:58:21,527 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:59:03] 2025-11-27 04:58:21,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:59:03] 2025-11-27 04:58:21,549 | INFO     | did not find any defunct processes belonging to 1888073
[2025-11-26 23:59:03] 2025-11-27 04:58:21,568 | INFO     | did not find any defunct processes belonging to 1888073
[2025-11-26 23:59:03] 2025-11-27 04:58:21,572 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:59:03] 2025-11-27 04:58:21,572 | INFO     | ready for new job
[2025-11-26 23:59:03] 2025-11-27 04:58:21,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:59:03] 2025-11-27 04:58:21,581 | INFO     | ***************************************
[2025-11-26 23:59:03] 2025-11-27 04:58:21,582 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:59:03] 2025-11-27 04:58:21,582 | INFO     | ***************************************
[2025-11-26 23:59:03] 2025-11-27 04:58:21,582 | INFO     | 
[2025-11-26 23:59:03] 2025-11-27 04:58:21,583 | INFO     | architecture information:
[2025-11-26 23:59:03] 2025-11-27 04:58:21,596 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:59:03] 2025-11-27 04:58:21,685 | INFO     | cat /etc/os-release:
[2025-11-26 23:59:03] NAME="CentOS Linux"
[2025-11-26 23:59:03] VERSION="7 (Core)"
[2025-11-26 23:59:03] ID="centos"
[2025-11-26 23:59:03] ID_LIKE="rhel fedora"
[2025-11-26 23:59:03] VERSION_ID="7"
[2025-11-26 23:59:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:59:03] ANSI_COLOR="0;31"
[2025-11-26 23:59:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:59:03] HOME_URL="https://www.centos.org/"
[2025-11-26 23:59:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:59:03] 
[2025-11-26 23:59:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:59:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:59:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:59:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:59:03] 
[2025-11-26 23:59:03] 2025-11-27 04:58:21,686 | INFO     | ***************************************
[2025-11-26 23:59:03] 2025-11-27 04:58:22,221 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 23:59:03] 2025-11-27 04:58:22,334 | INFO     | sufficient remaining disk space (71380762624 B)
[2025-11-26 23:59:03] 2025-11-27 04:58:22,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:59:03] 2025-11-27 04:58:22,335 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:59:03] 2025-11-27 04:58:22,335 | INFO     | update_server=False
[2025-11-26 23:59:03] 2025-11-27 04:58:22,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:59:03] 2025-11-27 04:58:22,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:59:03] 2025-11-27 04:58:22,604 | INFO     | all data control threads have been joined
[2025-11-26 23:59:03] 2025-11-27 04:58:22,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:59:03] 2025-11-27 04:58:22,671 | INFO     | aborting loop
[2025-11-26 23:59:03] 2025-11-27 04:58:22,810 | INFO     | all job control threads have been joined
[2025-11-26 23:59:03] 2025-11-27 04:58:22,910 | INFO     | all payload control threads have been joined
[2025-11-26 23:59:03] 2025-11-27 04:58:23,341 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:23,610 | INFO     | [data] control thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:23,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:23,676 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:23,711 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:23,816 | INFO     | [job] control thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:23,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:59:03] 2025-11-27 04:58:23,916 | INFO     | [payload] control thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:24,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:59:03] 2025-11-27 04:58:24,269 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:24,387 | INFO     | [job] validate thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:24,448 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:24,529 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:24,745 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:24,847 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:24,884 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:24,893 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:28,213 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:59:03] 2025-11-27 04:58:53,288 | INFO     | PID=1880440 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:59:03] 2025-11-27 04:58:53,288 | INFO     | .. there are 40 such processes running
[2025-11-26 23:59:03] 2025-11-27 04:58:53,289 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:59:03] 2025-11-27 04:58:53,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:59:03] 2025-11-27 04:58:53,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:59:03] 2025-11-27 04:58:54,257 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:59:03] 2025-11-27 04:58:56,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140604688746304)>', '<ExcThread(monitor, started 140604042360576)>']
[2025-11-26 23:59:03] 2025-11-27 04:58:56,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:59:03] 2025-11-27 04:58:56,310 | INFO     | [monitor] control thread has ended
[2025-11-26 23:59:03] 2025-11-27 04:59:01,327 | INFO     | all workflow threads have been joined
[2025-11-26 23:59:03] 2025-11-27 04:59:01,327 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:59:03] 2025-11-27 04:59:01,328 | INFO     | traces error code: 0
[2025-11-26 23:59:03] 2025-11-27 04:59:01,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:59:03] 2025-11-27 04:59:01,668 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:59:03] 2025-11-27 04:59:01,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:59:03] 2025-11-27 04:59:01,773 [wrapper] pilotpid: 1880440
[2025-11-26 23:59:03] 2025-11-27 04:59:01,852 [wrapper] Pilot exit status: 0
[2025-11-26 23:59:03] 2025-11-27 04:59:01,967 [wrapper] pandaids: 6895356036
[2025-11-26 23:59:03] 2025-11-27 04:59:02,284 [wrapper] cleanup supervisor_pilot 2700861 1880441
[2025-11-26 23:59:03] 2025-11-27 04:59:02,297 [wrapper] Test setup, not cleaning
[2025-11-26 23:59:03] 2025-11-27 04:59:02,332 [wrapper] apfmon messages muted
[2025-11-26 23:59:03] 2025-11-27 04:59:02,355 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:59:03] 2025-11-27 04:59:02,373 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:59:03]  *** Error codes and diagnostics ***
[2025-11-26 23:59:03]     "exeErrorCode": 0,
[2025-11-26 23:59:03]     "exeErrorDiag": "",
[2025-11-26 23:59:03]     "pilotErrorCode": 0,
[2025-11-26 23:59:03]     "pilotErrorDiag": "",
[2025-11-26 23:59:03]  *** Listing of results directory ***
[2025-11-26 23:59:03] total 1331648
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 04:19 pilot3.tar.gz
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:12 queuedata.json
[2025-11-26 23:59:03] -rwx------. 1 boincer umatlas     36292 Nov 23 05:13 runpilot2-wrapper.sh
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas       100 Nov 26 03:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:59:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 03:41 run_atlas
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas       105 Nov 26 03:41 job.xml
[2025-11-26 23:59:03] -rw-r--r--. 2 boincer umatlas 409993095 Nov 26 03:41 EVNT.47483658._000686.pool.root.1
[2025-11-26 23:59:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 03:41 shared
[2025-11-26 23:59:03] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 03:41 input.tar.gz
[2025-11-26 23:59:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 03:41 start_atlas.sh
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas         0 Nov 26 03:41 boinc_lockfile
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 03:41 pandaJob.out
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas        57 Nov 26 03:41 setup.sh.local
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas    991877 Nov 26 03:41 agis_schedconf.cvmfs.json
[2025-11-26 23:59:03] drwx------. 5 boincer umatlas      4096 Nov 26 03:41 pilot3
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas       533 Nov 26 23:28 boinc_task_state.xml
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas 926648952 Nov 26 23:56 HITS.47556137._006819.pool.root.1
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas      6660 Nov 26 23:57 init_data.xml
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas      1059 Nov 26 23:57 memory_monitor_summary.json
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas   1516240 Nov 26 23:57 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas   2398195 Nov 26 23:57 log.47556137._006819.job.log.tgz.1
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas      8615 Nov 26 23:58 heartbeat.json
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas        95 Nov 26 23:58 pilot_heartbeat.json
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas      4824 Nov 26 23:59 pilotlog.txt
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:59 boinc_mmap_file
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:59 wrapper_checkpoint.txt
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas   9122623 Nov 26 23:59 log.47556137._006819.job.log.1
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas       353 Nov 26 23:59 output.list
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:59 runtime_log
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas  11540480 Nov 26 23:59 result.tar.gz
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 23:59 runtime_log.err
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas       658 Nov 26 23:59 jpNODmzGMh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4mKKDmQKbx6m.diag
[2025-11-26 23:59:03] -rw-r--r--. 1 boincer umatlas     21843 Nov 26 23:59 stderr.txt
[2025-11-26 23:59:03] HITS file was successfully produced:
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas 926648952 Nov 26 23:56 shared/HITS.pool.root.1
[2025-11-26 23:59:03]  *** Contents of shared directory: ***
[2025-11-26 23:59:03] total 1317192
[2025-11-26 23:59:03] -rw-r--r--. 2 boincer umatlas 409993095 Nov 26 03:41 ATLAS.root_0
[2025-11-26 23:59:03] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 03:41 input.tar.gz
[2025-11-26 23:59:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 03:41 start_atlas.sh
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas 926648952 Nov 26 23:56 HITS.pool.root.1
[2025-11-26 23:59:03] -rw-------. 1 boincer umatlas  11540480 Nov 26 23:59 result.tar.gz
23:59:04 (1875452): run_atlas exited; CPU time 300852.884146
23:59:04 (1875452): called boinc_finish(0)

</stderr_txt>
]]>

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