Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:54:08 (2310237): wrapper (7.7.26015): starting
05:54:08 (2310237): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 05:54:08] Arguments: --nthreads 8
[2025-11-25 05:54:08] Threads: 8
[2025-11-25 05:54:08] Checking for CVMFS
[2025-11-25 05:54:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 05:54:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 05:54:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 05:54:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 05:54:11] 2.13.3.0 15513 28463 369152 153279 0 195 31629560 40960001 52485 16776704 0 283992615 99.866 95374830 31746 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 05:54:11] CVMFS is ok
[2025-11-25 05:54:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 05:54:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 05:54:11] Further information can be found at the LHC@home message board.
[2025-11-25 05:54:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 05:54:11] Checking for apptainer binary...
[2025-11-25 05:54:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 05:54:11] Running /usr/bin/apptainer --version
[2025-11-25 05:54:11] apptainer version 1.4.4-1.el9
[2025-11-25 05:54:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 05:54:11] c-1-1.aglt2.org
[2025-11-25 05:54:11] apptainer works
[2025-11-25 05:54:11] Set ATHENA_PROC_NUMBER=8
[2025-11-25 05:54:11] Set ATHENA_CORE_NUMBER=8
[2025-11-25 05:54:12] Starting ATLAS job with PandaID=6895386736
[2025-11-25 05:54:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:20:08 (2310237): BOINC client no longer exists - exiting
08:20:08 (2310237): timer handler: client dead, exiting
08:20:56 (3199179): wrapper (7.7.26015): starting
08:20:56 (3199179): wrapper: running run_atlas (--nthreads 10)
[2025-11-25 08:20:56] Arguments: --nthreads 10
[2025-11-25 08:20:56] Threads: 10
[2025-11-25 08:20:56] This job has been restarted, cleaning up previous attempt
[2025-11-25 08:20:57] Checking for CVMFS
[2025-11-25 08:20:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:20:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:20:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:20:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:20:57] 2.13.3.0 15513 28610 369116 153284 1 94 33495556 40960000 45455 16776704 0 285343628 99.866 95855677 31733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 08:20:57] CVMFS is ok
[2025-11-25 08:20:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:20:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:20:57] Further information can be found at the LHC@home message board.
[2025-11-25 08:20:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:20:57] Checking for apptainer binary...
[2025-11-25 08:20:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:20:57] Running /usr/bin/apptainer --version
[2025-11-25 08:20:57] apptainer version 1.4.4-1.el9
[2025-11-25 08:20:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:20:57] c-1-1.aglt2.org
[2025-11-25 08:20:57] apptainer works
[2025-11-25 08:20:57] Set ATHENA_PROC_NUMBER=10
[2025-11-25 08:20:57] Set ATHENA_CORE_NUMBER=10
[2025-11-25 08:20:57] Starting ATLAS job with PandaID=6895386736
[2025-11-25 08:20:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 23:56:56]  *** The last 200 lines of the pilot log: ***
[2025-11-25 23:56:56] 2025-11-26 04:56:19,167 | INFO     | monitor loop #3034: job 0:6895386736 is in state 'finished'
[2025-11-25 23:56:56] 2025-11-26 04:56:19,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 23:56:56] 2025-11-26 04:56:19,266 | INFO     | time since job start (56110s) is within the limit (172800.0s)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,051 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 23:56:56] 2025-11-26 04:56:20,063 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2867.3426625
[2025-11-25 23:56:56] 2025-11-26 04:56:20,077 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895386736/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,078 | INFO     | extracted standard info from prmon json
[2025-11-25 23:56:56] 2025-11-26 04:56:20,078 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 23:56:56] 2025-11-26 04:56:20,078 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 23:56:56] 2025-11-26 04:56:20,093 | INFO     | fitting pss+swap vs Time
[2025-11-25 23:56:56] 2025-11-26 04:56:20,094 | INFO     | sum of square deviations: 241458021987.19995
[2025-11-25 23:56:56] 2025-11-26 04:56:20,111 | INFO     | sum of deviations: 1398992216457.0999
[2025-11-25 23:56:56] 2025-11-26 04:56:20,111 | INFO     | mean x: 1764104929.7
[2025-11-25 23:56:56] 2025-11-26 04:56:20,111 | INFO     | mean y: 3175064.1489130436
[2025-11-25 23:56:56] 2025-11-26 04:56:20,111 | INFO     | intersect: -10217935194.903612
[2025-11-25 23:56:56] 2025-11-26 04:56:20,113 | INFO     | chi2: 9.794241474834411
[2025-11-25 23:56:56] 2025-11-26 04:56:20,114 | INFO     | sum of square deviations: 237543179822.86798
[2025-11-25 23:56:56] 2025-11-26 04:56:20,130 | INFO     | sum of deviations: 1751883150598.9023
[2025-11-25 23:56:56] 2025-11-26 04:56:20,130 | INFO     | mean x: 1764104777.2120218
[2025-11-25 23:56:56] 2025-11-26 04:56:20,130 | INFO     | mean y: 3188808.5726775955
[2025-11-25 23:56:56] 2025-11-26 04:56:20,130 | INFO     | intersect: -13007100257.159752
[2025-11-25 23:56:56] 2025-11-26 04:56:20,131 | INFO     | chi2: 6.33969079132731
[2025-11-25 23:56:56] 2025-11-26 04:56:20,132 | INFO     | current chi2=6.33969079132731 (change=35.27124272342393 %)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,133 | INFO     | sum of square deviations: 233670896595.76807
[2025-11-25 23:56:56] 2025-11-26 04:56:20,148 | INFO     | sum of deviations: 2104849320199.2195
[2025-11-25 23:56:56] 2025-11-26 04:56:20,149 | INFO     | mean x: 1764104624.724176
[2025-11-25 23:56:56] 2025-11-26 04:56:20,149 | INFO     | mean y: 3202702.658241758
[2025-11-25 23:56:56] 2025-11-26 04:56:20,149 | INFO     | intersect: -15887413006.042852
[2025-11-25 23:56:56] 2025-11-26 04:56:20,150 | INFO     | chi2: 2.8768712623572115
[2025-11-25 23:56:56] 2025-11-26 04:56:20,150 | INFO     | current chi2=2.8768712623572115 (change=54.62126849636314 %)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,151 | INFO     | sum of square deviations: 229840717961.2707
[2025-11-25 23:56:56] 2025-11-26 04:56:20,167 | INFO     | sum of deviations: 2209913459170.9897
[2025-11-25 23:56:56] 2025-11-26 04:56:20,167 | INFO     | mean x: 1764104472.2320442
[2025-11-25 23:56:56] 2025-11-26 04:56:20,167 | INFO     | mean y: 3206879.0762430937
[2025-11-25 23:56:56] 2025-11-26 04:56:20,167 | INFO     | intersect: -16958618906.841509
[2025-11-25 23:56:56] 2025-11-26 04:56:20,168 | INFO     | chi2: 2.380108330675888
[2025-11-25 23:56:56] 2025-11-26 04:56:20,168 | INFO     | current chi2=2.380108330675888 (change=17.26747172114656 %)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,168 | INFO     | right removable region: 904
[2025-11-25 23:56:56] 2025-11-26 04:56:20,170 | INFO     | sum of square deviations: 237542112941.13092
[2025-11-25 23:56:56] 2025-11-26 04:56:20,186 | INFO     | sum of deviations: 1142265164863.8257
[2025-11-25 23:56:56] 2025-11-26 04:56:20,187 | INFO     | mean x: 1764105082.208743
[2025-11-25 23:56:56] 2025-11-26 04:56:20,187 | INFO     | mean y: 3185047.0218579234
[2025-11-25 23:56:56] 2025-11-26 04:56:20,187 | INFO     | intersect: -8479840373.677631
[2025-11-25 23:56:56] 2025-11-26 04:56:20,188 | INFO     | chi2: 7.825242966485197
[2025-11-25 23:56:56] 2025-11-26 04:56:20,188 | INFO     | current chi2=7.825242966485197 (change=20.103634502053193 %)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,188 | INFO     | left removable region: 10
[2025-11-25 23:56:56] 2025-11-26 04:56:20,189 | INFO     | sum of square deviations: 221560793421.8527
[2025-11-25 23:56:56] 2025-11-26 04:56:20,205 | INFO     | sum of deviations: 1854002874518.5286
[2025-11-25 23:56:56] 2025-11-26 04:56:20,205 | INFO     | mean x: 1764104746.7449665
[2025-11-25 23:56:56] 2025-11-26 04:56:20,206 | INFO     | mean y: 3220873.0067114094
[2025-11-25 23:56:56] 2025-11-26 04:56:20,206 | INFO     | intersect: -14758665564.137459
[2025-11-25 23:56:56] 2025-11-26 04:56:20,207 | INFO     | chi2: 0.2518153362517444
[2025-11-25 23:56:56] 2025-11-26 04:56:20,207 | INFO     | current memory leak: 8.37 B/s (using 894 data points, chi2=0.25)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,208 | INFO     | could have reported an average CPU frequency of 2910 MHz (34 samples)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,208 | INFO     | ..............................
[2025-11-25 23:56:56] 2025-11-26 04:56:20,208 | INFO     | . Timing measurements:
[2025-11-25 23:56:56] 2025-11-26 04:56:20,208 | INFO     | . get job = 0 s
[2025-11-25 23:56:56] 2025-11-26 04:56:20,209 | INFO     | . initial setup = 1 s
[2025-11-25 23:56:56] 2025-11-26 04:56:20,209 | INFO     | . payload setup = 6 s
[2025-11-25 23:56:56] 2025-11-26 04:56:20,209 | INFO     | . stage-in = 0 s
[2025-11-25 23:56:56] 2025-11-26 04:56:20,209 | INFO     | . payload execution = 56066 s
[2025-11-25 23:56:56] 2025-11-26 04:56:20,209 | INFO     | . stage-out = 4 s
[2025-11-25 23:56:56] 2025-11-26 04:56:20,209 | INFO     | . log creation = 1 s
[2025-11-25 23:56:56] 2025-11-26 04:56:20,209 | INFO     | ..............................
[2025-11-25 23:56:56] 2025-11-26 04:56:20,303 | INFO     | 
[2025-11-25 23:56:56] 2025-11-26 04:56:20,303 | INFO     | job summary report
[2025-11-25 23:56:56] 2025-11-26 04:56:20,303 | INFO     | --------------------------------------------------
[2025-11-25 23:56:56] 2025-11-26 04:56:20,303 | INFO     | PanDA job id: 6895386736
[2025-11-25 23:56:56] 2025-11-26 04:56:20,303 | INFO     | task id: 47556149
[2025-11-25 23:56:56] 2025-11-26 04:56:20,303 | INFO     | errors: (none)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 23:56:56] 2025-11-26 04:56:20,303 | INFO     | pilot state: finished 
[2025-11-25 23:56:56] 2025-11-26 04:56:20,303 | INFO     | transexitcode: 0
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | exeerrorcode: 0
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | exeerrordiag: 
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | exitcode: 0
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | exitmsg: OK
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | cpuconsumptiontime: 261145 s
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | nevents: 1000
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | neventsw: 0
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | pid: 3249487
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | pgrp: 3249487
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | corecount: 10
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | event service: False
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | sizes: {0: 2284200, 1: 2284342, 5: 2284604, 11: 2284660, 56074: 2334224, 56079: 2343218, 56081: 2343402, 56095: 2343648}
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | --------------------------------------------------
[2025-11-25 23:56:56] 2025-11-26 04:56:20,304 | INFO     | 
[2025-11-25 23:56:56] 2025-11-26 04:56:20,305 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 23:56:56] 2025-11-26 04:56:20,411 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,412 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | job 6895386736 has completed (purged errors)
[2025-11-25 23:56:56] 2025-11-26 04:56:20,413 | INFO     | overall cleanup function is called
[2025-11-25 23:56:56] 2025-11-26 04:56:21,446 | INFO     | --- collectZombieJob: --- 10, [3249487]
[2025-11-25 23:56:56] 2025-11-26 04:56:21,447 | INFO     | zombie collector waiting for pid 3249487
[2025-11-25 23:56:56] 2025-11-26 04:56:21,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 23:56:56] 2025-11-26 04:56:21,448 | INFO     | collected zombie processes
[2025-11-25 23:56:56] 2025-11-26 04:56:21,448 | INFO     | will attempt to kill all subprocesses of pid=3249487
[2025-11-25 23:56:56] 2025-11-26 04:56:22,342 | INFO     | process IDs to be killed: [3249487] (in reverse order)
[2025-11-25 23:56:56] 2025-11-26 04:56:22,601 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 23:56:56] 2025-11-26 04:56:22,601 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 23:56:56] 2025-11-26 04:56:22,629 | INFO     | did not find any defunct processes belonging to 3249487
[2025-11-25 23:56:56] 2025-11-26 04:56:22,675 | INFO     | did not find any defunct processes belonging to 3249487
[2025-11-25 23:56:56] 2025-11-26 04:56:22,683 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 23:56:56] 2025-11-26 04:56:22,683 | INFO     | ready for new job
[2025-11-25 23:56:56] 2025-11-26 04:56:22,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 23:56:56] 2025-11-26 04:56:22,687 | INFO     | ***************************************
[2025-11-25 23:56:56] 2025-11-26 04:56:22,688 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 23:56:56] 2025-11-26 04:56:22,688 | INFO     | ***************************************
[2025-11-25 23:56:56] 2025-11-26 04:56:22,688 | INFO     | 
[2025-11-25 23:56:56] 2025-11-26 04:56:22,692 | INFO     | architecture information:
[2025-11-25 23:56:56] 2025-11-26 04:56:22,693 | INFO     | executing command: cat /etc/os-release
[2025-11-25 23:56:56] 2025-11-26 04:56:22,727 | INFO     | cat /etc/os-release:
[2025-11-25 23:56:56] NAME="CentOS Linux"
[2025-11-25 23:56:56] VERSION="7 (Core)"
[2025-11-25 23:56:56] ID="centos"
[2025-11-25 23:56:56] ID_LIKE="rhel fedora"
[2025-11-25 23:56:56] VERSION_ID="7"
[2025-11-25 23:56:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 23:56:56] ANSI_COLOR="0;31"
[2025-11-25 23:56:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 23:56:56] HOME_URL="https://www.centos.org/"
[2025-11-25 23:56:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 23:56:56] 
[2025-11-25 23:56:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 23:56:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 23:56:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 23:56:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 23:56:56] 
[2025-11-25 23:56:56] 2025-11-26 04:56:22,728 | INFO     | ***************************************
[2025-11-25 23:56:56] 2025-11-26 04:56:23,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 23:56:56] 2025-11-26 04:56:23,257 | INFO     | sufficient remaining disk space (97493450752 B)
[2025-11-25 23:56:56] 2025-11-26 04:56:23,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 23:56:56] 2025-11-26 04:56:23,257 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 23:56:56] 2025-11-26 04:56:23,258 | INFO     | update_server=False
[2025-11-25 23:56:56] 2025-11-26 04:56:23,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 23:56:56] 2025-11-26 04:56:23,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:56:56] 2025-11-26 04:56:23,258 | INFO     | aborting loop
[2025-11-25 23:56:56] 2025-11-26 04:56:23,420 | INFO     | all data control threads have been joined
[2025-11-25 23:56:56] 2025-11-26 04:56:23,720 | INFO     | all payload control threads have been joined
[2025-11-25 23:56:56] 2025-11-26 04:56:24,264 | INFO     | [job] retrieve thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:24,271 | INFO     | [job] job monitor thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:24,356 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:24,394 | INFO     | [payload] validate_post thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:24,426 | INFO     | [data] control thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:24,452 | INFO     | all job control threads have been joined
[2025-11-25 23:56:56] 2025-11-26 04:56:24,623 | INFO     | [payload] failed_post thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:24,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 23:56:56] 2025-11-26 04:56:24,725 | INFO     | [payload] control thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:24,732 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:25,136 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:25,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 23:56:56] 2025-11-26 04:56:25,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 23:56:56] 2025-11-26 04:56:25,419 | INFO     | [job] validate thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:25,459 | INFO     | [job] control thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:25,562 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:25,614 | INFO     | [data] copytool_in thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:26,325 | INFO     | [job] queue monitor thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:26,733 | INFO     | [data] copytool_out thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:29,268 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 23:56:56] 2025-11-26 04:56:49,728 | INFO     | [monitor] cgroup control has ended
[2025-11-25 23:56:56] 2025-11-26 04:56:50,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081567926080)>', '<ExcThread(monitor, started 140080937158400)>']
[2025-11-25 23:56:56] 2025-11-26 04:56:53,166 | INFO     | PID=3217915 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 23:56:56] 2025-11-26 04:56:53,166 | INFO     | .. there are 75 such processes running
[2025-11-25 23:56:56] 2025-11-26 04:56:53,167 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 23:56:56] 2025-11-26 04:56:53,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 23:56:56] 2025-11-26 04:56:53,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 23:56:56] 2025-11-26 04:56:53,167 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 23:56:56] 2025-11-26 04:56:53,168 | INFO     | [monitor] control thread has ended
[2025-11-25 23:56:56] 2025-11-26 04:56:55,659 | INFO     | all workflow threads have been joined
[2025-11-25 23:56:56] 2025-11-26 04:56:55,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 23:56:56] 2025-11-26 04:56:55,659 | INFO     | traces error code: 0
[2025-11-25 23:56:56] 2025-11-26 04:56:55,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 23:56:56] 2025-11-26 04:56:55,857 [wrapper] ==== pilot stdout END ====
[2025-11-25 23:56:56] 2025-11-26 04:56:55,863 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 23:56:56] 2025-11-26 04:56:55,878 [wrapper] pilotpid: 3217915
[2025-11-25 23:56:56] 2025-11-26 04:56:55,923 [wrapper] Pilot exit status: 0
[2025-11-25 23:56:56] 2025-11-26 04:56:56,015 [wrapper] pandaids: 6895386736 6895386736
[2025-11-25 23:56:56] 2025-11-26 04:56:56,186 [wrapper] cleanup supervisor_pilot   59551 3217916
[2025-11-25 23:56:56] 2025-11-26 04:56:56,189 [wrapper] Test setup, not cleaning
[2025-11-25 23:56:56] 2025-11-26 04:56:56,192 [wrapper] apfmon messages muted
[2025-11-25 23:56:56] 2025-11-26 04:56:56,194 [wrapper] ==== wrapper stdout END ====
[2025-11-25 23:56:56] 2025-11-26 04:56:56,197 [wrapper] ==== wrapper stderr END ====
[2025-11-25 23:56:56]  *** Error codes and diagnostics ***
[2025-11-25 23:56:56]     "exeErrorCode": 0,
[2025-11-25 23:56:56]     "exeErrorDiag": "",
[2025-11-25 23:56:56]     "pilotErrorCode": 0,
[2025-11-25 23:56:56]     "pilotErrorDiag": "",
[2025-11-25 23:56:56]  *** Listing of results directory ***
[2025-11-25 23:56:56] total 1710744
[2025-11-25 23:56:56] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-25 23:56:56] -rwx------. 1 boincer umatlas     36292 Nov 24 01:01 runpilot2-wrapper.sh
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 01:01 queuedata.json
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas       100 Nov 25 05:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 23:56:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 05:54 run_atlas
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas       105 Nov 25 05:54 job.xml
[2025-11-25 23:56:56] -rw-r--r--. 3 boincer umatlas 408572014 Nov 25 05:54 EVNT.47483658._001253.pool.root.1
[2025-11-25 23:56:56] -rw-r--r--. 3 boincer umatlas 408572014 Nov 25 05:54 ATLAS.root_0
[2025-11-25 23:56:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 05:54 start_atlas.sh
[2025-11-25 23:56:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 05:54 shared
[2025-11-25 23:56:56] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 05:54 input.tar.gz
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas         0 Nov 25 05:54 boinc_lockfile
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 08:20 pandaJob.out
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas        57 Nov 25 08:20 setup.sh.local
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas    991909 Nov 25 08:21 agis_schedconf.cvmfs.json
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas       533 Nov 25 23:41 boinc_task_state.xml
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas      6841 Nov 25 23:54 init_data.xml
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas 912827987 Nov 25 23:55 HITS.47556149._002396.pool.root.1
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas      1058 Nov 25 23:55 memory_monitor_summary.json
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas   1516240 Nov 25 23:56 agis_ddmendpoints.agis.ALL.json
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas   2269103 Nov 25 23:56 log.47556149._002396.job.log.tgz.1
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas      8610 Nov 25 23:56 heartbeat.json
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 23:56 boinc_mmap_file
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas        29 Nov 25 23:56 wrapper_checkpoint.txt
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas        95 Nov 25 23:56 pilot_heartbeat.json
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas      4824 Nov 25 23:56 pilotlog.txt
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas   6678591 Nov 25 23:56 log.47556149._002396.job.log.1
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas       353 Nov 25 23:56 output.list
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas       620 Nov 25 23:56 runtime_log
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas   8970240 Nov 25 23:56 result.tar.gz
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas      9415 Nov 25 23:56 runtime_log.err
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas       782 Nov 25 23:56 fDzNDm4oeh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4wIKDmFE9Ljm.diag
[2025-11-25 23:56:56] -rw-r--r--. 1 boincer umatlas     23615 Nov 25 23:56 stderr.txt
[2025-11-25 23:56:56] HITS file was successfully produced:
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas 912827987 Nov 25 23:55 shared/HITS.pool.root.1
[2025-11-25 23:56:56]  *** Contents of shared directory: ***
[2025-11-25 23:56:56] total 1299800
[2025-11-25 23:56:56] -rw-r--r--. 3 boincer umatlas 408572014 Nov 25 05:54 ATLAS.root_0
[2025-11-25 23:56:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 05:54 start_atlas.sh
[2025-11-25 23:56:56] -rw-r--r--. 2 boincer umatlas    590101 Nov 25 05:54 input.tar.gz
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas 912827987 Nov 25 23:55 HITS.pool.root.1
[2025-11-25 23:56:56] -rw-------. 1 boincer umatlas   8970240 Nov 25 23:56 result.tar.gz
23:56:57 (3199179): run_atlas exited; CPU time 263934.506600
23:56:57 (3199179): called boinc_finish(0)

</stderr_txt>
]]>

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