Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:55:58 (3054582): wrapper (7.7.26015): starting
13:55:58 (3054582): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 13:55:58] Arguments: --nthreads 9
[2025-11-25 13:55:58] Threads: 9
[2025-11-25 13:55:58] Checking for CVMFS
[2025-11-25 13:55:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 13:55:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 13:55:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 13:55:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 13:55:58] 2.13.3.0 5308 7383 218196 153293 2 231 30542133 32935937 21038 16776704 0 19398973 99.386 34880305 40290 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 13:55:58] CVMFS is ok
[2025-11-25 13:55:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 13:55:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 13:55:58] Further information can be found at the LHC@home message board.
[2025-11-25 13:55:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 13:55:58] Checking for apptainer binary...
[2025-11-25 13:55:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 13:55:58] Running /usr/bin/apptainer --version
[2025-11-25 13:55:58] apptainer version 1.4.4-1.el9
[2025-11-25 13:55:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 13:55:59] c6-1-24-1.aglt2.org
[2025-11-25 13:55:59] apptainer works
[2025-11-25 13:55:59] Set ATHENA_PROC_NUMBER=9
[2025-11-25 13:55:59] Set ATHENA_CORE_NUMBER=9
[2025-11-25 13:55:59] Starting ATLAS job with PandaID=6895386984
[2025-11-25 13:55:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:56:34]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:56:34] 2025-11-26 11:36:40,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:56:34] 2025-11-26 11:36:41,313 | INFO     | time since job start (60030s) is within the limit (172800.0s)
[2025-11-26 08:56:34] 2025-11-26 11:36:41,683 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 08:56:34] 2025-11-26 11:36:41,687 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2894.7130357142855
[2025-11-26 08:56:34] 2025-11-26 11:36:41,696 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895386984/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:56:34] 2025-11-26 11:36:41,697 | INFO     | extracted standard info from prmon json
[2025-11-26 08:56:34] 2025-11-26 11:36:41,697 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:56:34] 2025-11-26 11:36:41,697 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:56:34] 2025-11-26 11:36:41,712 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:56:34] 2025-11-26 11:36:41,714 | INFO     | sum of square deviations: 294591499256.55164
[2025-11-26 08:56:34] 2025-11-26 11:36:41,983 | INFO     | sum of deviations: 2306257108051.538
[2025-11-26 08:56:34] 2025-11-26 11:36:41,984 | INFO     | mean x: 1764126953.9786367
[2025-11-26 08:56:34] 2025-11-26 11:36:41,984 | INFO     | mean y: 3071389.835198372
[2025-11-26 08:56:34] 2025-11-26 11:36:41,984 | INFO     | intersect: -13807681253.693624
[2025-11-26 08:56:34] 2025-11-26 11:36:42,001 | INFO     | chi2: 9.227873525587922
[2025-11-26 08:56:34] 2025-11-26 11:36:42,003 | INFO     | sum of square deviations: 290121663534.41724
[2025-11-26 08:56:34] 2025-11-26 11:36:42,173 | INFO     | sum of deviations: 2647049999297.189
[2025-11-26 08:56:34] 2025-11-26 11:36:42,174 | INFO     | mean x: 1764126801.5092025
[2025-11-26 08:56:34] 2025-11-26 11:36:42,174 | INFO     | mean y: 3083016.4233128834
[2025-11-26 08:56:34] 2025-11-26 11:36:42,174 | INFO     | intersect: -16092687950.163313
[2025-11-26 08:56:34] 2025-11-26 11:36:42,190 | INFO     | chi2: 6.154881891096928
[2025-11-26 08:56:34] 2025-11-26 11:36:42,191 | INFO     | current chi2=6.154881891096928 (change=33.30118933652387 %)
[2025-11-26 08:56:34] 2025-11-26 11:36:42,192 | INFO     | sum of square deviations: 285697257388.51636
[2025-11-26 08:56:34] 2025-11-26 11:36:42,265 | INFO     | sum of deviations: 3009508670213.5464
[2025-11-26 08:56:34] 2025-11-26 11:36:42,265 | INFO     | mean x: 1764126649.0390544
[2025-11-26 08:56:34] 2025-11-26 11:36:42,265 | INFO     | mean y: 3095502.1171634123
[2025-11-26 08:56:34] 2025-11-26 11:36:42,266 | INFO     | intersect: -18580052597.263947
[2025-11-26 08:56:34] 2025-11-26 11:36:42,267 | INFO     | chi2: 2.6768530355631253
[2025-11-26 08:56:34] 2025-11-26 11:36:42,275 | INFO     | current chi2=2.6768530355631253 (change=56.508458116227885 %)
[2025-11-26 08:56:34] 2025-11-26 11:36:42,276 | INFO     | sum of square deviations: 281316863675.8143
[2025-11-26 08:56:34] 2025-11-26 11:36:42,324 | INFO     | sum of deviations: 3083991387049.0674
[2025-11-26 08:56:34] 2025-11-26 11:36:42,325 | INFO     | mean x: 1764126496.5475206
[2025-11-26 08:56:34] 2025-11-26 11:36:42,325 | INFO     | mean y: 3098090.6508264462
[2025-11-26 08:56:34] 2025-11-26 11:36:42,325 | INFO     | intersect: -19336485217.39862
[2025-11-26 08:56:34] 2025-11-26 11:36:42,326 | INFO     | chi2: 2.3433248818963452
[2025-11-26 08:56:34] 2025-11-26 11:36:42,326 | INFO     | current chi2=2.3433248818963452 (change=12.459711057563391 %)
[2025-11-26 08:56:34] 2025-11-26 11:36:42,326 | INFO     | right removable region: 967
[2025-11-26 08:56:34] 2025-11-26 11:36:42,336 | INFO     | sum of square deviations: 290118138416.43445
[2025-11-26 08:56:34] 2025-11-26 11:36:42,384 | INFO     | sum of deviations: 2048064464039.1794
[2025-11-26 08:56:34] 2025-11-26 11:36:42,385 | INFO     | mean x: 1764127106.50818
[2025-11-26 08:56:34] 2025-11-26 11:36:42,385 | INFO     | mean y: 3080179.9775051125
[2025-11-26 08:56:34] 2025-11-26 11:36:42,385 | INFO     | intersect: -12450625943.358746
[2025-11-26 08:56:34] 2025-11-26 11:36:42,386 | INFO     | chi2: 7.357248787675216
[2025-11-26 08:56:34] 2025-11-26 11:36:42,386 | INFO     | current chi2=7.357248787675216 (change=20.27146051282195 %)
[2025-11-26 08:56:34] 2025-11-26 11:36:42,386 | INFO     | left removable region: 10
[2025-11-26 08:56:34] 2025-11-26 11:36:42,395 | INFO     | sum of square deviations: 271834101890.69797
[2025-11-26 08:56:34] 2025-11-26 11:36:42,443 | INFO     | sum of deviations: 2733775503031.964
[2025-11-26 08:56:34] 2025-11-26 11:36:42,444 | INFO     | mean x: 1764126771.1086729
[2025-11-26 08:56:34] 2025-11-26 11:36:42,444 | INFO     | mean y: 3109994.2215256006
[2025-11-26 08:56:34] 2025-11-26 11:36:42,444 | INFO     | intersect: -17738323172.390293
[2025-11-26 08:56:34] 2025-11-26 11:36:42,445 | INFO     | chi2: 0.38796135987534625
[2025-11-26 08:56:34] 2025-11-26 11:36:42,445 | INFO     | current memory leak: 10.06 B/s (using 957 data points, chi2=0.39)
[2025-11-26 08:56:34] 2025-11-26 11:36:42,446 | INFO     | could have reported an average CPU frequency of 2984 MHz (36 samples)
[2025-11-26 08:56:34] 2025-11-26 11:36:42,447 | INFO     | ..............................
[2025-11-26 08:56:34] 2025-11-26 11:36:42,455 | INFO     | . Timing measurements:
[2025-11-26 08:56:34] 2025-11-26 11:36:42,455 | INFO     | . get job = 0 s
[2025-11-26 08:56:34] 2025-11-26 11:36:42,455 | INFO     | . initial setup = 2 s
[2025-11-26 08:56:34] 2025-11-26 11:36:42,455 | INFO     | . payload setup = 5 s
[2025-11-26 08:56:34] 2025-11-26 11:36:42,455 | INFO     | . stage-in = 0 s
[2025-11-26 08:56:34] 2025-11-26 11:36:42,455 | INFO     | . payload execution = 59959 s
[2025-11-26 08:56:34] 2025-11-26 11:36:42,455 | INFO     | . stage-out = 9 s
[2025-11-26 08:56:34] 2025-11-26 11:36:42,455 | INFO     | . log creation = 2 s
[2025-11-26 08:56:34] 2025-11-26 11:36:42,456 | INFO     | ..............................
[2025-11-26 08:56:34] 2025-11-26 11:36:43,075 | INFO     | 
[2025-11-26 08:56:34] 2025-11-26 11:36:43,075 | INFO     | job summary report
[2025-11-26 08:56:34] 2025-11-26 11:36:43,075 | INFO     | --------------------------------------------------
[2025-11-26 08:56:34] 2025-11-26 11:36:43,075 | INFO     | PanDA job id: 6895386984
[2025-11-26 08:56:34] 2025-11-26 11:36:43,075 | INFO     | task id: 47556149
[2025-11-26 08:56:34] 2025-11-26 11:36:43,075 | INFO     | errors: (none)
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | pilot state: finished 
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | transexitcode: 0
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | exeerrorcode: 0
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | exeerrordiag: 
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | exitcode: 0
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | exitmsg: OK
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | cpuconsumptiontime: 237558 s
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | nevents: 1000
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | neventsw: 0
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | pid: 3069191
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | pgrp: 3069191
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | corecount: 9
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | event service: False
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | sizes: {0: 2284093, 1: 2284292, 5: 2284554, 11: 2284610, 59970: 2336301, 59971: 2336300, 59981: 2345478, 59983: 2345534, 60017: 2345780}
[2025-11-26 08:56:34] 2025-11-26 11:36:43,076 | INFO     | --------------------------------------------------
[2025-11-26 08:56:34] 2025-11-26 11:36:43,077 | INFO     | 
[2025-11-26 08:56:34] 2025-11-26 11:36:43,077 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 08:56:34] 2025-11-26 11:36:43,338 | INFO     | time since job start (60032s) is within the limit (172800.0s)
[2025-11-26 08:56:34] 2025-11-26 11:36:43,430 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,430 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,430 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,432 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:56:34] 2025-11-26 11:36:43,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,432 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:56:34] 2025-11-26 11:36:43,432 | INFO     | job 6895386984 has completed (purged errors)
[2025-11-26 08:56:34] 2025-11-26 11:36:43,432 | INFO     | overall cleanup function is called
[2025-11-26 08:56:34] 2025-11-26 11:36:44,582 | INFO     | --- collectZombieJob: --- 10, [3069191]
[2025-11-26 08:56:34] 2025-11-26 11:36:44,582 | INFO     | zombie collector waiting for pid 3069191
[2025-11-26 08:56:34] 2025-11-26 11:36:44,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:56:34] 2025-11-26 11:36:44,582 | INFO     | collected zombie processes
[2025-11-26 08:56:34] 2025-11-26 11:36:44,582 | INFO     | will attempt to kill all subprocesses of pid=3069191
[2025-11-26 08:56:34] 2025-11-26 11:36:48,386 | INFO     | process IDs to be killed: [3069191] (in reverse order)
[2025-11-26 08:56:34] 2025-11-26 11:36:48,771 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:56:34] 2025-11-26 11:36:48,772 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:56:34] 2025-11-26 11:36:48,787 | INFO     | did not find any defunct processes belonging to 3069191
[2025-11-26 08:56:34] 2025-11-26 11:36:48,802 | INFO     | did not find any defunct processes belonging to 3069191
[2025-11-26 08:56:34] 2025-11-26 11:36:48,804 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:56:34] 2025-11-26 11:36:48,804 | INFO     | ready for new job
[2025-11-26 08:56:34] 2025-11-26 11:36:48,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:56:34] 2025-11-26 11:36:48,849 | INFO     | ***************************************
[2025-11-26 08:56:34] 2025-11-26 11:36:48,849 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:56:34] 2025-11-26 11:36:48,849 | INFO     | ***************************************
[2025-11-26 08:56:34] 2025-11-26 11:36:48,849 | INFO     | 
[2025-11-26 08:56:34] 2025-11-26 11:36:48,875 | INFO     | architecture information:
[2025-11-26 08:56:34] 2025-11-26 11:36:48,890 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:56:34] 2025-11-26 11:36:49,102 | INFO     | cat /etc/os-release:
[2025-11-26 08:56:34] NAME="CentOS Linux"
[2025-11-26 08:56:34] VERSION="7 (Core)"
[2025-11-26 08:56:34] ID="centos"
[2025-11-26 08:56:34] ID_LIKE="rhel fedora"
[2025-11-26 08:56:34] VERSION_ID="7"
[2025-11-26 08:56:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:56:34] ANSI_COLOR="0;31"
[2025-11-26 08:56:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:56:34] HOME_URL="https://www.centos.org/"
[2025-11-26 08:56:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:56:34] 
[2025-11-26 08:56:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:56:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:56:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:56:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:56:34] 
[2025-11-26 08:56:34] 2025-11-26 11:36:49,102 | INFO     | ***************************************
[2025-11-26 08:56:34] 2025-11-26 11:36:49,605 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 08:56:34] 2025-11-26 11:36:49,831 | INFO     | sufficient remaining disk space (67799875584 B)
[2025-11-26 08:56:34] 2025-11-26 11:36:49,832 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:56:34] 2025-11-26 11:36:49,832 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:56:34] 2025-11-26 11:36:49,832 | INFO     | update_server=False
[2025-11-26 08:56:34] 2025-11-26 11:36:49,832 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:56:34] 2025-11-26 11:36:49,851 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:56:34] 2025-11-26 11:36:49,851 | INFO     | aborting loop
[2025-11-26 08:56:34] 2025-11-26 11:36:49,892 | INFO     | all data control threads have been joined
[2025-11-26 08:56:34] 2025-11-26 11:36:50,352 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:56:34] 2025-11-26 11:36:50,399 | INFO     | all payload control threads have been joined
[2025-11-26 08:56:34] 2025-11-26 11:36:50,838 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:50,857 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:50,898 | INFO     | [data] control thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,093 | INFO     | all job control threads have been joined
[2025-11-26 08:56:34] 2025-11-26 11:36:51,110 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,188 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,199 | INFO     | [job] validate thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,321 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,358 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,405 | INFO     | [payload] control thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,512 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,569 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,589 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:51,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:56:34] 2025-11-26 11:36:52,099 | INFO     | [job] control thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:52,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:56:34] 2025-11-26 11:36:52,376 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:52,862 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:36:56,228 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:56:34] 2025-11-26 11:37:09,179 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:56:34] 2025-11-26 11:37:09,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140530867873600)>', '<ExcThread(monitor, started 140530239395584)>']
[2025-11-26 08:56:34] 2025-11-26 11:37:14,900 | INFO     | all workflow threads have been joined
[2025-11-26 08:56:34] 2025-11-26 11:37:14,900 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:56:34] 2025-11-26 11:37:14,900 | INFO     | traces error code: 0
[2025-11-26 08:56:34] 2025-11-26 11:37:14,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:56:34] 2025-11-26 11:37:23,139 | INFO     | PID=3059991 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 08:56:34] 2025-11-26 11:37:23,192 | INFO     | .. there are 34 such processes running
[2025-11-26 08:56:34] 2025-11-26 11:37:23,209 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:56:34] 2025-11-26 11:37:23,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:56:34] 2025-11-26 11:37:23,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:56:34] 2025-11-26 11:37:23,209 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:56:34] 2025-11-26 11:37:23,209 | INFO     | [monitor] control thread has ended
[2025-11-26 08:56:34] 2025-11-26 11:37:24,085 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:56:34] 2025-11-26 11:37:24,115 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:56:34] 2025-11-26 11:37:24,136 [wrapper] pilotpid: 3059991
[2025-11-26 08:56:34] 2025-11-26 11:37:24,160 [wrapper] Pilot exit status: 0
[2025-11-26 08:56:34] 2025-11-26 11:37:24,274 [wrapper] pandaids: 6895386984
[2025-11-26 08:56:34] 2025-11-26 11:37:24,461 [wrapper] cleanup supervisor_pilot 2025679 3059992
[2025-11-26 08:56:34] 2025-11-26 11:37:24,509 [wrapper] Test setup, not cleaning
[2025-11-26 08:56:34] 2025-11-26 11:37:24,535 [wrapper] apfmon messages muted
[2025-11-26 08:56:34] 2025-11-26 11:37:24,538 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:56:34] 2025-11-26 11:37:24,541 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:56:34]  *** Error codes and diagnostics ***
[2025-11-26 08:56:34]     "exeErrorCode": 0,
[2025-11-26 08:56:34]     "exeErrorDiag": "",
[2025-11-26 08:56:34]     "pilotErrorCode": 0,
[2025-11-26 08:56:34]     "pilotErrorDiag": "",
[2025-11-26 08:56:34]  *** Listing of results directory ***
[2025-11-26 08:56:34] total 1307356
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 01:20 pilot3.tar.gz
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 01:23 queuedata.json
[2025-11-26 08:56:34] -rwx------. 1 boincer umatlas     36292 Nov 24 01:25 runpilot2-wrapper.sh
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas       100 Nov 25 13:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:56:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 13:55 run_atlas
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas       105 Nov 25 13:55 job.xml
[2025-11-26 08:56:34] -rw-r--r--. 2 boincer umatlas 411992958 Nov 25 13:55 EVNT.47483658._001257.pool.root.1
[2025-11-26 08:56:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 13:55 start_atlas.sh
[2025-11-26 08:56:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 13:55 shared
[2025-11-26 08:56:34] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 13:55 input.tar.gz
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas         0 Nov 25 13:55 boinc_lockfile
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 13:55 pandaJob.out
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas        57 Nov 25 13:55 setup.sh.local
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas    991543 Nov 25 13:56 agis_schedconf.cvmfs.json
[2025-11-26 08:56:34] drwx------. 5 boincer umatlas      4096 Nov 25 13:56 pilot3
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas       533 Nov 26 06:20 boinc_task_state.xml
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas 904356332 Nov 26 06:35 HITS.47556149._002435.pool.root.1
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas      1058 Nov 26 06:35 memory_monitor_summary.json
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas   1516240 Nov 26 06:36 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas   2194513 Nov 26 06:36 log.47556149._002435.job.log.tgz.1
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas      8618 Nov 26 06:36 heartbeat.json
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas        95 Nov 26 06:37 pilot_heartbeat.json
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas       823 Nov 26 06:37 pilotlog.txt
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas   7037375 Nov 26 06:37 log.47556149._002435.job.log.1
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas       353 Nov 26 06:37 output.list
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas       620 Nov 26 06:37 runtime_log
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas   9246720 Nov 26 06:37 result.tar.gz
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 06:37 runtime_log.err
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas       661 Nov 26 06:37 dIWMDm4Bfh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsVLKDmNx2LFo.diag
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas      6842 Nov 26 08:56 init_data.xml
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:56 boinc_mmap_file
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:56 wrapper_checkpoint.txt
[2025-11-26 08:56:34] -rw-r--r--. 1 boincer umatlas     21367 Nov 26 08:56 stderr.txt
[2025-11-26 08:56:34] HITS file was successfully produced:
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas 904356332 Nov 26 06:35 shared/HITS.pool.root.1
[2025-11-26 08:56:34]  *** Contents of shared directory: ***
[2025-11-26 08:56:34] total 1295140
[2025-11-26 08:56:34] -rw-r--r--. 2 boincer umatlas 411992958 Nov 25 13:55 ATLAS.root_0
[2025-11-26 08:56:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 13:55 start_atlas.sh
[2025-11-26 08:56:34] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 13:55 input.tar.gz
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas 904356332 Nov 26 06:35 HITS.pool.root.1
[2025-11-26 08:56:34] -rw-------. 1 boincer umatlas   9246720 Nov 26 06:37 result.tar.gz
08:56:36 (3054582): run_atlas exited; CPU time 238797.518688
08:56:36 (3054582): called boinc_finish(0)

</stderr_txt>
]]>

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