Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:58 (2899987): wrapper (7.7.26015): starting
00:10:58 (2899987): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:10:59] Arguments: --nthreads 8
[2025-11-25 00:10:59] Threads: 8
[2025-11-25 00:10:59] Checking for CVMFS
[2025-11-25 00:10:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:10:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:10:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:11:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:11:01] 2.13.2.0 6529 31889 483460 153270 0 738 32711194 40960000 18288 16776704 0 66762812 99.572 77766024 40115 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:11:01] CVMFS is ok
[2025-11-25 00:11:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:11:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:11:01] Further information can be found at the LHC@home message board.
[2025-11-25 00:11:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:11:01] Checking for apptainer binary...
[2025-11-25 00:11:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:11:01] Running /usr/bin/apptainer --version
[2025-11-25 00:11:01] apptainer version 1.4.4-1.el9
[2025-11-25 00:11:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:11:02] c-206-36.aglt2.org
[2025-11-25 00:11:02] apptainer works
[2025-11-25 00:11:02] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:11:02] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:11:02] Starting ATLAS job with PandaID=6895386735
[2025-11-25 00:11:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:20:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:20:02] 2025-11-27 04:18:48,979 | INFO     | monitor loop #9833: job 0:6895386735 is in state 'finished'
[2025-11-26 23:20:02] 2025-11-27 04:18:48,980 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:20:02] 2025-11-27 04:18:49,910 | INFO     | time since job start (169599s) is within the limit (172800.0s)
[2025-11-26 23:20:02] 2025-11-27 04:18:51,499 | INFO     | monitor loop #9834: job 0:6895386735 is in state 'finished'
[2025-11-26 23:20:02] 2025-11-27 04:18:51,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:20:02] 2025-11-27 04:18:51,916 | INFO     | time since job start (169601s) is within the limit (172800.0s)
[2025-11-26 23:20:02] 2025-11-27 04:18:53,467 | INFO     | PID=2914036 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:20:02] 2025-11-27 04:18:53,467 | INFO     | .. there are 20 such processes running
[2025-11-26 23:20:02] 2025-11-27 04:18:54,022 | INFO     | monitor loop #9835: job 0:6895386735 is in state 'finished'
[2025-11-26 23:20:02] 2025-11-27 04:18:54,022 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:20:02] 2025-11-27 04:18:54,468 | INFO     | time since job start (169604s) is within the limit (172800.0s)
[2025-11-26 23:20:02] 2025-11-27 04:18:56,473 | INFO     | time since job start (169606s) is within the limit (172800.0s)
[2025-11-26 23:20:02] 2025-11-27 04:18:56,526 | INFO     | monitor loop #9836: job 0:6895386735 is in state 'finished'
[2025-11-26 23:20:02] 2025-11-27 04:18:56,526 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:20:02] 2025-11-27 04:18:57,094 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 23:20:02] 2025-11-27 04:18:57,100 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3169.6695937500012
[2025-11-26 23:20:02] 2025-11-27 04:18:57,111 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6895386735/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:20:02] 2025-11-27 04:18:57,112 | INFO     | extracted standard info from prmon json
[2025-11-26 23:20:02] 2025-11-27 04:18:57,112 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:20:02] 2025-11-27 04:18:57,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:20:02] 2025-11-27 04:18:57,147 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:20:02] 2025-11-27 04:18:57,150 | INFO     | sum of square deviations: 6654977984459.263
[2025-11-26 23:20:02] 2025-11-27 04:18:57,507 | INFO     | sum of deviations: 15583657242015.258
[2025-11-26 23:20:02] 2025-11-27 04:18:57,507 | INFO     | mean x: 1764132318.5354445
[2025-11-26 23:20:02] 2025-11-27 04:18:57,507 | INFO     | mean y: 2947836.0079165166
[2025-11-26 23:20:02] 2025-11-27 04:18:57,507 | INFO     | intersect: -4128040041.9109354
[2025-11-26 23:20:02] 2025-11-27 04:18:57,514 | INFO     | chi2: 16.28869820772018
[2025-11-26 23:20:02] 2025-11-27 04:18:57,516 | INFO     | sum of square deviations: 6619123013589.946
[2025-11-26 23:20:02] 2025-11-27 04:18:58,138 | INFO     | sum of deviations: 16528246291433.1
[2025-11-26 23:20:02] 2025-11-27 04:18:58,138 | INFO     | mean x: 1764132166.038212
[2025-11-26 23:20:02] 2025-11-27 04:18:58,138 | INFO     | mean y: 2951853.1031002165
[2025-11-26 23:20:02] 2025-11-27 04:18:58,138 | INFO     | intersect: -4402165089.285434
[2025-11-26 23:20:02] 2025-11-27 04:18:58,161 | INFO     | chi2: 13.134737411536694
[2025-11-26 23:20:02] 2025-11-27 04:18:58,161 | INFO     | current chi2=13.134737411536694 (change=19.36287821140082 %)
[2025-11-26 23:20:02] 2025-11-27 04:18:58,161 | INFO     | right removable region: 2773
[2025-11-26 23:20:02] 2025-11-27 04:18:58,184 | INFO     | sum of square deviations: 6619120749396.101
[2025-11-26 23:20:02] 2025-11-27 04:18:58,704 | INFO     | time since job start (169608s) is within the limit (172800.0s)
[2025-11-26 23:20:02] 2025-11-27 04:18:59,067 | INFO     | sum of deviations: 14918070224379.072
[2025-11-26 23:20:02] 2025-11-27 04:18:59,067 | INFO     | mean x: 1764132471.037491
[2025-11-26 23:20:02] 2025-11-27 04:18:59,067 | INFO     | mean y: 2950665.2779379957
[2025-11-26 23:20:02] 2025-11-27 04:18:59,067 | INFO     | intersect: -3973023347.652066
[2025-11-26 23:20:02] 2025-11-27 04:18:59,069 | INFO     | chi2: 14.61100602939654
[2025-11-26 23:20:02] 2025-11-27 04:18:59,074 | INFO     | current chi2=14.61100602939654 (change=10.299731488232023 %)
[2025-11-26 23:20:02] 2025-11-27 04:18:59,074 | INFO     | left removable region: 10
[2025-11-26 23:20:02] 2025-11-27 04:18:59,076 | INFO     | sum of square deviations: 6540691897669.929
[2025-11-26 23:20:02] 2025-11-27 04:18:59,093 | INFO     | monitor loop #9837: job 0:6895386735 is in state 'finished'
[2025-11-26 23:20:02] 2025-11-27 04:18:59,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:20:02] 2025-11-27 04:18:59,591 | INFO     | sum of deviations: 15752644745889.615
[2025-11-26 23:20:02] 2025-11-27 04:18:59,592 | INFO     | mean x: 1764132440.5418024
[2025-11-26 23:20:02] 2025-11-27 04:18:59,592 | INFO     | mean y: 2956654.3195801666
[2025-11-26 23:20:02] 2025-11-27 04:18:59,592 | INFO     | intersect: -4245791345.9423084
[2025-11-26 23:20:02] 2025-11-27 04:18:59,594 | INFO     | chi2: 10.78302813035209
[2025-11-26 23:20:02] 2025-11-27 04:18:59,594 | INFO     | current memory leak: 2.41 B/s (using 2763 data points, chi2=10.78)
[2025-11-26 23:20:02] 2025-11-27 04:18:59,602 | INFO     | could have reported an average CPU frequency of 3214 MHz (96 samples)
[2025-11-26 23:20:02] 2025-11-27 04:18:59,603 | INFO     | ..............................
[2025-11-26 23:20:02] 2025-11-27 04:18:59,603 | INFO     | . Timing measurements:
[2025-11-26 23:20:02] 2025-11-27 04:18:59,603 | INFO     | . get job = 0 s
[2025-11-26 23:20:02] 2025-11-27 04:18:59,603 | INFO     | . initial setup = 5 s
[2025-11-26 23:20:02] 2025-11-27 04:18:59,603 | INFO     | . payload setup = 10 s
[2025-11-26 23:20:02] 2025-11-27 04:18:59,603 | INFO     | . stage-in = 0 s
[2025-11-26 23:20:02] 2025-11-27 04:18:59,603 | INFO     | . payload execution = 169514 s
[2025-11-26 23:20:02] 2025-11-27 04:18:59,603 | INFO     | . stage-out = 10 s
[2025-11-26 23:20:02] 2025-11-27 04:18:59,603 | INFO     | . log creation = 4 s
[2025-11-26 23:20:02] 2025-11-27 04:18:59,604 | INFO     | ..............................
[2025-11-26 23:20:02] 2025-11-27 04:18:59,964 | INFO     | 
[2025-11-26 23:20:02] 2025-11-27 04:18:59,964 | INFO     | job summary report
[2025-11-26 23:20:02] 2025-11-27 04:18:59,964 | INFO     | --------------------------------------------------
[2025-11-26 23:20:02] 2025-11-27 04:18:59,964 | INFO     | PanDA job id: 6895386735
[2025-11-26 23:20:02] 2025-11-27 04:18:59,964 | INFO     | task id: 47556149
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | errors: (none)
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | pilot state: finished 
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | transexitcode: 0
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | exeerrorcode: 0
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | exeerrordiag: 
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | exitcode: 0
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | exitmsg: OK
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | cpuconsumptiontime: 208954 s
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | nevents: 1000
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | neventsw: 0
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | pid: 2952384
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | pgrp: 2952384
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | corecount: 8
[2025-11-26 23:20:02] 2025-11-27 04:18:59,965 | INFO     | event service: False
[2025-11-26 23:20:02] 2025-11-27 04:18:59,966 | INFO     | sizes: {0: 2283481, 1: 2284337, 12: 2284337, 23: 2284655, 33: 2284655, 169529: 2388530, 169541: 2397529, 169542: 2397585, 169568: 2397831}
[2025-11-26 23:20:02] 2025-11-27 04:18:59,966 | INFO     | --------------------------------------------------
[2025-11-26 23:20:02] 2025-11-27 04:18:59,966 | INFO     | 
[2025-11-26 23:20:02] 2025-11-27 04:18:59,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,001 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:20:02] 2025-11-27 04:19:00,002 | INFO     | job 6895386735 has completed (purged errors)
[2025-11-26 23:20:02] 2025-11-27 04:19:00,003 | INFO     | overall cleanup function is called
[2025-11-26 23:20:02] 2025-11-27 04:19:01,022 | INFO     | --- collectZombieJob: --- 10, [2952384]
[2025-11-26 23:20:02] 2025-11-27 04:19:01,022 | INFO     | zombie collector waiting for pid 2952384
[2025-11-26 23:20:02] 2025-11-27 04:19:01,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:20:02] 2025-11-27 04:19:01,022 | INFO     | collected zombie processes
[2025-11-26 23:20:02] 2025-11-27 04:19:01,022 | INFO     | will attempt to kill all subprocesses of pid=2952384
[2025-11-26 23:20:02] 2025-11-27 04:19:02,059 | INFO     | process IDs to be killed: [2952384] (in reverse order)
[2025-11-26 23:20:02] 2025-11-27 04:19:02,293 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:20:02] 2025-11-27 04:19:02,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:20:02] 2025-11-27 04:19:02,310 | INFO     | did not find any defunct processes belonging to 2952384
[2025-11-26 23:20:02] 2025-11-27 04:19:02,326 | INFO     | did not find any defunct processes belonging to 2952384
[2025-11-26 23:20:02] 2025-11-27 04:19:02,345 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:20:02] 2025-11-27 04:19:02,345 | INFO     | ready for new job
[2025-11-26 23:20:02] 2025-11-27 04:19:02,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:20:02] 2025-11-27 04:19:02,359 | INFO     | ***************************************
[2025-11-26 23:20:02] 2025-11-27 04:19:02,359 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:20:02] 2025-11-27 04:19:02,359 | INFO     | ***************************************
[2025-11-26 23:20:02] 2025-11-27 04:19:02,359 | INFO     | 
[2025-11-26 23:20:02] 2025-11-27 04:19:02,367 | INFO     | architecture information:
[2025-11-26 23:20:02] 2025-11-27 04:19:02,386 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:20:02] 2025-11-27 04:19:02,433 | INFO     | cat /etc/os-release:
[2025-11-26 23:20:02] NAME="CentOS Linux"
[2025-11-26 23:20:02] VERSION="7 (Core)"
[2025-11-26 23:20:02] ID="centos"
[2025-11-26 23:20:02] ID_LIKE="rhel fedora"
[2025-11-26 23:20:02] VERSION_ID="7"
[2025-11-26 23:20:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:20:02] ANSI_COLOR="0;31"
[2025-11-26 23:20:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:20:02] HOME_URL="https://www.centos.org/"
[2025-11-26 23:20:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:20:02] 
[2025-11-26 23:20:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:20:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:20:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:20:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:20:02] 
[2025-11-26 23:20:02] 2025-11-27 04:19:02,433 | INFO     | ***************************************
[2025-11-26 23:20:02] 2025-11-27 04:19:02,937 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-26 23:20:02] 2025-11-27 04:19:02,964 | INFO     | sufficient remaining disk space (78009860096 B)
[2025-11-26 23:20:02] 2025-11-27 04:19:02,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:20:02] 2025-11-27 04:19:02,965 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:20:02] 2025-11-27 04:19:02,965 | INFO     | update_server=False
[2025-11-26 23:20:02] 2025-11-27 04:19:02,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:20:02] 2025-11-27 04:19:02,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:20:02] 2025-11-27 04:19:02,966 | INFO     | aborting loop
[2025-11-26 23:20:02] 2025-11-27 04:19:03,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:20:02] 2025-11-27 04:19:03,435 | INFO     | all payload control threads have been joined
[2025-11-26 23:20:02] 2025-11-27 04:19:03,733 | INFO     | all data control threads have been joined
[2025-11-26 23:20:02] 2025-11-27 04:19:03,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:20:02] 2025-11-27 04:19:03,971 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:03,979 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:04,030 | INFO     | all job control threads have been joined
[2025-11-26 23:20:02] 2025-11-27 04:19:04,444 | INFO     | [payload] control thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:04,559 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:04,585 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:04,648 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:04,672 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:04,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:20:02] 2025-11-27 04:19:04,758 | INFO     | [data] control thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:05,026 | INFO     | [job] validate thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:05,026 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:05,050 | INFO     | [job] control thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:05,188 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:05,244 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:05,727 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:05,751 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:07,226 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:20:02] 2025-11-27 04:19:33,254 | INFO     | PID=2914036 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:20:02] 2025-11-27 04:19:33,255 | INFO     | .. there are 20 such processes running
[2025-11-26 23:20:02] 2025-11-27 04:19:33,255 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:20:02] 2025-11-27 04:19:33,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:20:02] 2025-11-27 04:19:33,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:20:02] 2025-11-27 04:19:34,603 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:20:02] 2025-11-27 04:19:36,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140696895375168)>', '<ExcThread(monitor, started 140696367372032)>']
[2025-11-26 23:20:02] 2025-11-27 04:19:37,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:20:02] 2025-11-27 04:19:37,281 | INFO     | [monitor] control thread has ended
[2025-11-26 23:20:02] 2025-11-27 04:19:41,465 | INFO     | all workflow threads have been joined
[2025-11-26 23:20:02] 2025-11-27 04:19:41,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:20:02] 2025-11-27 04:19:41,465 | INFO     | traces error code: 0
[2025-11-26 23:20:02] 2025-11-27 04:19:41,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:20:02] 2025-11-27 04:19:42,074 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:20:02] 2025-11-27 04:19:42,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:20:02] 2025-11-27 04:19:42,150 [wrapper] pilotpid: 2914036
[2025-11-26 23:20:02] 2025-11-27 04:19:42,268 [wrapper] Pilot exit status: 0
[2025-11-26 23:20:02] 2025-11-27 04:19:42,458 [wrapper] pandaids: 6895386735
[2025-11-26 23:20:02] 2025-11-27 04:19:42,926 [wrapper] cleanup supervisor_pilot 2046261 2914037
[2025-11-26 23:20:02] 2025-11-27 04:19:42,982 [wrapper] Test setup, not cleaning
[2025-11-26 23:20:02] 2025-11-27 04:19:43,013 [wrapper] apfmon messages muted
[2025-11-26 23:20:02] 2025-11-27 04:19:43,018 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:20:02] 2025-11-27 04:19:43,021 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:20:02]  *** Error codes and diagnostics ***
[2025-11-26 23:20:02]     "exeErrorCode": 0,
[2025-11-26 23:20:02]     "exeErrorDiag": "",
[2025-11-26 23:20:02]     "pilotErrorCode": 0,
[2025-11-26 23:20:02]     "pilotErrorDiag": "",
[2025-11-26 23:20:02]  *** Listing of results directory ***
[2025-11-26 23:20:02] total 1346056
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-26 23:20:02] -rwx------. 1 boincer umatlas     36292 Nov 24 01:01 runpilot2-wrapper.sh
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 01:01 queuedata.json
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:20:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:10 run_atlas
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:10 job.xml
[2025-11-26 23:20:02] -rw-r--r--. 2 boincer umatlas 408572014 Nov 25 00:10 EVNT.47483658._001253.pool.root.1
[2025-11-26 23:20:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:10 start_atlas.sh
[2025-11-26 23:20:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:10 shared
[2025-11-26 23:20:02] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:10 input.tar.gz
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:10 boinc_lockfile
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:11 pandaJob.out
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas        57 Nov 25 00:11 setup.sh.local
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas    991801 Nov 25 00:12 agis_schedconf.cvmfs.json
[2025-11-26 23:20:02] drwx------. 5 boincer umatlas      4096 Nov 25 00:12 pilot3
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:54 boinc_task_state.xml
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas 917383626 Nov 26 23:16 HITS.47556149._002395.pool.root.1
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas      1072 Nov 26 23:18 memory_monitor_summary.json
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas   1516240 Nov 26 23:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas   3380438 Nov 26 23:18 log.47556149._002395.job.log.tgz.1
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas      6902 Nov 26 23:18 init_data.xml
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas      8638 Nov 26 23:18 heartbeat.json
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas        95 Nov 26 23:19 pilot_heartbeat.json
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas      4824 Nov 26 23:19 pilotlog.txt
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas  20873483 Nov 26 23:19 log.47556149._002395.job.log.1
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas       353 Nov 26 23:19 output.list
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:19 runtime_log
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas  24268800 Nov 26 23:19 result.tar.gz
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas      9344 Nov 26 23:19 runtime_log.err
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas       669 Nov 26 23:19 JlxNDm4oeh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3wIKDmv7LVyn.diag
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:20 boinc_mmap_file
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas      2141 Nov 26 23:20 stderr.txt
[2025-11-26 23:20:02] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:20 wrapper_checkpoint.txt
[2025-11-26 23:20:02] HITS file was successfully produced:
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas 917383626 Nov 26 23:16 shared/HITS.pool.root.1
[2025-11-26 23:20:02]  *** Contents of shared directory: ***
[2025-11-26 23:20:02] total 1319184
[2025-11-26 23:20:02] -rw-r--r--. 2 boincer umatlas 408572014 Nov 25 00:10 ATLAS.root_0
[2025-11-26 23:20:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:10 start_atlas.sh
[2025-11-26 23:20:02] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:10 input.tar.gz
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas 917383626 Nov 26 23:16 HITS.pool.root.1
[2025-11-26 23:20:02] -rw-------. 1 boincer umatlas  24268800 Nov 26 23:19 result.tar.gz
23:20:04 (2899987): run_atlas exited; CPU time 209304.927733
23:20:04 (2899987): called boinc_finish(0)

</stderr_txt>
]]>

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