Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:50 (3663151): wrapper (7.7.26015): starting
00:13:50 (3663151): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:13:50] Arguments: --nthreads 9
[2025-11-25 00:13:50] Threads: 9
[2025-11-25 00:13:50] Checking for CVMFS
[2025-11-25 00:13:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:13:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:13:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:13:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:13:54] 2.13.2.0 6111 32563 269676 153271 2 74 31500516 40960000 14379 16776704 0 32530599 99.737 21235629 38549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:13:54] CVMFS is ok
[2025-11-25 00:13:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:13:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:13:54] Further information can be found at the LHC@home message board.
[2025-11-25 00:13:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:13:54] Checking for apptainer binary...
[2025-11-25 00:13:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:13:54] Running /usr/bin/apptainer --version
[2025-11-25 00:13:54] apptainer version 1.4.4-1.el9
[2025-11-25 00:13:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:13:56] c-210-35-3.aglt2.org
[2025-11-25 00:13:56] apptainer works
[2025-11-25 00:13:56] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:13:56] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:13:56] Starting ATLAS job with PandaID=6895386983
[2025-11-25 00:13:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:57:05]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:57:05] 2025-11-27 00:56:13,959 | INFO     | monitor loop #9150: job 0:6895386983 is in state 'finished'
[2025-11-26 19:57:05] 2025-11-27 00:56:13,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 19:57:05] 2025-11-27 00:56:16,495 | INFO     | monitor loop #9151: job 0:6895386983 is in state 'finished'
[2025-11-26 19:57:05] 2025-11-27 00:56:16,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 19:57:05] 2025-11-27 00:56:16,767 | INFO     | PID=3671084 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 19:57:05] 2025-11-27 00:56:16,767 | INFO     | .. there are 13 such processes running
[2025-11-26 19:57:05] 2025-11-27 00:56:17,770 | INFO     | time since job start (157235s) is within the limit (172800.0s)
[2025-11-26 19:57:05] 2025-11-27 00:56:19,006 | INFO     | monitor loop #9152: job 0:6895386983 is in state 'finished'
[2025-11-26 19:57:05] 2025-11-27 00:56:19,006 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 19:57:05] 2025-11-27 00:56:19,781 | INFO     | time since job start (157237s) is within the limit (172800.0s)
[2025-11-26 19:57:05] 2025-11-27 00:56:21,538 | INFO     | monitor loop #9153: job 0:6895386983 is in state 'finished'
[2025-11-26 19:57:05] 2025-11-27 00:56:21,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 19:57:05] 2025-11-27 00:56:21,790 | INFO     | time since job start (157239s) is within the limit (172800.0s)
[2025-11-26 19:57:05] 2025-11-27 00:56:23,423 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 19:57:05] 2025-11-27 00:56:23,430 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2678.186035714284
[2025-11-26 19:57:05] 2025-11-27 00:56:23,449 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895386983/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 19:57:05] 2025-11-27 00:56:23,450 | INFO     | extracted standard info from prmon json
[2025-11-26 19:57:05] 2025-11-27 00:56:23,450 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 19:57:05] 2025-11-27 00:56:23,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 19:57:05] 2025-11-27 00:56:23,544 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:57:05] 2025-11-27 00:56:23,548 | INFO     | sum of square deviations: 5288082779232.539
[2025-11-26 19:57:05] 2025-11-27 00:56:23,807 | INFO     | time since job start (157241s) is within the limit (172800.0s)
[2025-11-26 19:57:05] 2025-11-27 00:56:24,095 | INFO     | monitor loop #9154: job 0:6895386983 is in state 'finished'
[2025-11-26 19:57:05] 2025-11-27 00:56:24,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 19:57:05] 2025-11-27 00:56:24,097 | INFO     | sum of deviations: 12315603755598.117
[2025-11-26 19:57:05] 2025-11-27 00:56:24,097 | INFO     | mean x: 1764126429.565268
[2025-11-26 19:57:05] 2025-11-27 00:56:24,097 | INFO     | mean y: 3043974.2226107228
[2025-11-26 19:57:05] 2025-11-27 00:56:24,097 | INFO     | intersect: -4105492708.793734
[2025-11-26 19:57:05] 2025-11-27 00:56:24,100 | INFO     | chi2: 35.13349550548418
[2025-11-26 19:57:05] 2025-11-27 00:56:24,139 | INFO     | sum of square deviations: 5257330619840.744
[2025-11-26 19:57:05] 2025-11-27 00:56:24,982 | INFO     | sum of deviations: 13312656024890.627
[2025-11-26 19:57:05] 2025-11-27 00:56:24,982 | INFO     | mean x: 1764126277.0770729
[2025-11-26 19:57:05] 2025-11-27 00:56:24,982 | INFO     | mean y: 3048917.6481121057
[2025-11-26 19:57:05] 2025-11-27 00:56:24,982 | INFO     | intersect: -4464086214.117556
[2025-11-26 19:57:05] 2025-11-27 00:56:24,991 | INFO     | chi2: 31.286857604592974
[2025-11-26 19:57:05] 2025-11-27 00:56:24,991 | INFO     | current chi2=31.286857604592974 (change=10.948634189532209 %)
[2025-11-26 19:57:05] 2025-11-27 00:56:24,991 | INFO     | right removable region: 2568
[2025-11-26 19:57:05] 2025-11-27 00:56:25,000 | INFO     | sum of square deviations: 5257321253301.894
[2025-11-26 19:57:05] 2025-11-27 00:56:25,394 | INFO     | sum of deviations: 11238218808852.734
[2025-11-26 19:57:05] 2025-11-27 00:56:25,395 | INFO     | mean x: 1764126582.0766835
[2025-11-26 19:57:05] 2025-11-27 00:56:25,395 | INFO     | mean y: 3049315.2958349553
[2025-11-26 19:57:05] 2025-11-27 00:56:25,395 | INFO     | intersect: -3768004341.248295
[2025-11-26 19:57:05] 2025-11-27 00:56:25,408 | INFO     | chi2: 31.1347572538969
[2025-11-26 19:57:05] 2025-11-27 00:56:25,409 | INFO     | current chi2=31.1347572538969 (change=11.381555390533492 %)
[2025-11-26 19:57:05] 2025-11-27 00:56:25,409 | INFO     | left removable region: 10
[2025-11-26 19:57:05] 2025-11-27 00:56:25,422 | INFO     | sum of square deviations: 5190077102941.08
[2025-11-26 19:57:05] 2025-11-27 00:56:25,869 | INFO     | time since job start (157243s) is within the limit (172800.0s)
[2025-11-26 19:57:05] 2025-11-27 00:56:26,083 | INFO     | sum of deviations: 11429536844287.785
[2025-11-26 19:57:05] 2025-11-27 00:56:26,083 | INFO     | mean x: 1764126551.601642
[2025-11-26 19:57:05] 2025-11-27 00:56:26,083 | INFO     | mean y: 3059993.67005473
[2025-11-26 19:57:05] 2025-11-27 00:56:26,083 | INFO     | intersect: -3881882179.5572753
[2025-11-26 19:57:05] 2025-11-27 00:56:26,086 | INFO     | chi2: 23.504762280461737
[2025-11-26 19:57:05] 2025-11-27 00:56:26,086 | INFO     | current memory leak: 2.20 B/s (using 2558 data points, chi2=23.50)
[2025-11-26 19:57:05] 2025-11-27 00:56:26,089 | INFO     | could have reported an average CPU frequency of 2696 MHz (89 samples)
[2025-11-26 19:57:05] 2025-11-27 00:56:26,089 | INFO     | ..............................
[2025-11-26 19:57:05] 2025-11-27 00:56:26,089 | INFO     | . Timing measurements:
[2025-11-26 19:57:05] 2025-11-27 00:56:26,090 | INFO     | . get job = 0 s
[2025-11-26 19:57:05] 2025-11-27 00:56:26,090 | INFO     | . initial setup = 6 s
[2025-11-26 19:57:05] 2025-11-27 00:56:26,090 | INFO     | . payload setup = 59 s
[2025-11-26 19:57:05] 2025-11-27 00:56:26,090 | INFO     | . stage-in = 0 s
[2025-11-26 19:57:05] 2025-11-27 00:56:26,090 | INFO     | . payload execution = 157013 s
[2025-11-26 19:57:05] 2025-11-27 00:56:26,090 | INFO     | . stage-out = 18 s
[2025-11-26 19:57:05] 2025-11-27 00:56:26,090 | INFO     | . log creation = 4 s
[2025-11-26 19:57:05] 2025-11-27 00:56:26,090 | INFO     | ..............................
[2025-11-26 19:57:05] 2025-11-27 00:56:26,426 | INFO     | 
[2025-11-26 19:57:05] 2025-11-27 00:56:26,446 | INFO     | job summary report
[2025-11-26 19:57:05] 2025-11-27 00:56:26,446 | INFO     | --------------------------------------------------
[2025-11-26 19:57:05] 2025-11-27 00:56:26,447 | INFO     | PanDA job id: 6895386983
[2025-11-26 19:57:05] 2025-11-27 00:56:26,447 | INFO     | task id: 47556149
[2025-11-26 19:57:05] 2025-11-27 00:56:26,447 | INFO     | errors: (none)
[2025-11-26 19:57:05] 2025-11-27 00:56:26,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:57:05] 2025-11-27 00:56:26,447 | INFO     | pilot state: finished 
[2025-11-26 19:57:05] 2025-11-27 00:56:26,447 | INFO     | transexitcode: 0
[2025-11-26 19:57:05] 2025-11-27 00:56:26,447 | INFO     | exeerrorcode: 0
[2025-11-26 19:57:05] 2025-11-27 00:56:26,447 | INFO     | exeerrordiag: 
[2025-11-26 19:57:05] 2025-11-27 00:56:26,448 | INFO     | exitcode: 0
[2025-11-26 19:57:05] 2025-11-27 00:56:26,448 | INFO     | exitmsg: OK
[2025-11-26 19:57:05] 2025-11-27 00:56:26,448 | INFO     | cpuconsumptiontime: 270051 s
[2025-11-26 19:57:05] 2025-11-27 00:56:26,448 | INFO     | nevents: 1000
[2025-11-26 19:57:05] 2025-11-27 00:56:26,448 | INFO     | neventsw: 0
[2025-11-26 19:57:05] 2025-11-27 00:56:26,448 | INFO     | pid: 3678605
[2025-11-26 19:57:05] 2025-11-27 00:56:26,448 | INFO     | pgrp: 3678605
[2025-11-26 19:57:05] 2025-11-27 00:56:26,448 | INFO     | corecount: 9
[2025-11-26 19:57:05] 2025-11-27 00:56:26,449 | INFO     | event service: False
[2025-11-26 19:57:05] 2025-11-27 00:56:26,449 | INFO     | sizes: {0: 2283431, 1: 2284032, 2: 2284144, 3: 2284144, 4: 2284343, 15: 2284343, 26: 2284499, 38: 2284527, 49: 2284555, 53: 2284845, 60: 2284873, 157079: 2382040, 
[2025-11-26 19:57:05] 2025-11-27 00:56:26,449 | INFO     | --------------------------------------------------
[2025-11-26 19:57:05] 2025-11-27 00:56:26,449 | INFO     | 
[2025-11-26 19:57:05] 2025-11-27 00:56:26,449 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 19:57:05] 2025-11-27 00:56:26,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,722 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:57:05] 2025-11-27 00:56:26,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,722 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:57:05] 2025-11-27 00:56:26,723 | INFO     | job 6895386983 has completed (purged errors)
[2025-11-26 19:57:05] 2025-11-27 00:56:26,723 | INFO     | overall cleanup function is called
[2025-11-26 19:57:05] 2025-11-27 00:56:27,776 | INFO     | --- collectZombieJob: --- 10, [3678605]
[2025-11-26 19:57:05] 2025-11-27 00:56:27,776 | INFO     | zombie collector waiting for pid 3678605
[2025-11-26 19:57:05] 2025-11-27 00:56:27,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:57:05] 2025-11-27 00:56:27,776 | INFO     | collected zombie processes
[2025-11-26 19:57:05] 2025-11-27 00:56:27,776 | INFO     | will attempt to kill all subprocesses of pid=3678605
[2025-11-26 19:57:05] 2025-11-27 00:56:29,270 | INFO     | process IDs to be killed: [3678605] (in reverse order)
[2025-11-26 19:57:05] 2025-11-27 00:56:29,510 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:57:05] 2025-11-27 00:56:29,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:57:05] 2025-11-27 00:56:29,557 | INFO     | did not find any defunct processes belonging to 3678605
[2025-11-26 19:57:05] 2025-11-27 00:56:29,606 | INFO     | did not find any defunct processes belonging to 3678605
[2025-11-26 19:57:05] 2025-11-27 00:56:29,626 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:57:05] 2025-11-27 00:56:29,627 | INFO     | ready for new job
[2025-11-26 19:57:05] 2025-11-27 00:56:29,627 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:57:05] 2025-11-27 00:56:29,693 | INFO     | ***************************************
[2025-11-26 19:57:05] 2025-11-27 00:56:29,693 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:57:05] 2025-11-27 00:56:29,693 | INFO     | ***************************************
[2025-11-26 19:57:05] 2025-11-27 00:56:29,693 | INFO     | 
[2025-11-26 19:57:05] 2025-11-27 00:56:29,732 | INFO     | architecture information:
[2025-11-26 19:57:05] 2025-11-27 00:56:29,763 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:57:05] 2025-11-27 00:56:29,833 | INFO     | cat /etc/os-release:
[2025-11-26 19:57:05] NAME="CentOS Linux"
[2025-11-26 19:57:05] VERSION="7 (Core)"
[2025-11-26 19:57:05] ID="centos"
[2025-11-26 19:57:05] ID_LIKE="rhel fedora"
[2025-11-26 19:57:05] VERSION_ID="7"
[2025-11-26 19:57:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:57:05] ANSI_COLOR="0;31"
[2025-11-26 19:57:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:57:05] HOME_URL="https://www.centos.org/"
[2025-11-26 19:57:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:57:05] 
[2025-11-26 19:57:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:57:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:57:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:57:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:57:05] 
[2025-11-26 19:57:05] 2025-11-27 00:56:29,834 | INFO     | ***************************************
[2025-11-26 19:57:05] 2025-11-27 00:56:30,337 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 19:57:05] 2025-11-27 00:56:30,481 | INFO     | sufficient remaining disk space (67117252608 B)
[2025-11-26 19:57:05] 2025-11-27 00:56:30,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:57:05] 2025-11-27 00:56:30,482 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:57:05] 2025-11-27 00:56:30,482 | INFO     | update_server=False
[2025-11-26 19:57:05] 2025-11-27 00:56:30,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:57:05] 2025-11-27 00:56:30,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:57:05] 2025-11-27 00:56:30,482 | INFO     | aborting loop
[2025-11-26 19:57:05] 2025-11-27 00:56:30,778 | INFO     | all data control threads have been joined
[2025-11-26 19:57:05] 2025-11-27 00:56:30,847 | INFO     | all payload control threads have been joined
[2025-11-26 19:57:05] 2025-11-27 00:56:30,984 | INFO     | all job control threads have been joined
[2025-11-26 19:57:05] 2025-11-27 00:56:31,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:57:05] 2025-11-27 00:56:31,448 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:57:05] 2025-11-27 00:56:31,489 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:31,490 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:31,500 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:31,508 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:31,513 | INFO     | [job] validate thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:31,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:57:05] 2025-11-27 00:56:31,784 | INFO     | [data] control thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:31,853 | INFO     | [payload] control thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:31,866 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:31,990 | INFO     | [job] control thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:32,454 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:32,731 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:32,939 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:32,947 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:33,041 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:33,774 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:35,022 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:57:05] 2025-11-27 00:56:39,623 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:57:05] 2025-11-27 00:56:40,532 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140450334213952)>', '<ExcThread(monitor, started 140449842976512)>']
[2025-11-26 19:57:05] 2025-11-27 00:56:45,557 | INFO     | all workflow threads have been joined
[2025-11-26 19:57:05] 2025-11-27 00:56:45,557 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:57:05] 2025-11-27 00:56:45,558 | INFO     | traces error code: 0
[2025-11-26 19:57:05] 2025-11-27 00:56:45,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:57:05] 2025-11-27 00:57:02,811 | INFO     | PID=3671084 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 19:57:05] 2025-11-27 00:57:02,818 | INFO     | .. there are 13 such processes running
[2025-11-26 19:57:05] 2025-11-27 00:57:02,818 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:57:05] 2025-11-27 00:57:02,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:57:05] 2025-11-27 00:57:02,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:57:05] 2025-11-27 00:57:02,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:57:05] 2025-11-27 00:57:02,819 | INFO     | [monitor] control thread has ended
[2025-11-26 19:57:05] 2025-11-27 00:57:03,883 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:57:05] 2025-11-27 00:57:03,937 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:57:05] 2025-11-27 00:57:04,095 [wrapper] pilotpid: 3671084
[2025-11-26 19:57:05] 2025-11-27 00:57:04,141 [wrapper] Pilot exit status: 0
[2025-11-26 19:57:05] 2025-11-27 00:57:04,297 [wrapper] pandaids: 6895386983
[2025-11-26 19:57:05] 2025-11-27 00:57:04,922 [wrapper] cleanup supervisor_pilot 4030914 3671085
[2025-11-26 19:57:05] 2025-11-27 00:57:04,958 [wrapper] Test setup, not cleaning
[2025-11-26 19:57:05] 2025-11-27 00:57:04,982 [wrapper] apfmon messages muted
[2025-11-26 19:57:05] 2025-11-27 00:57:05,023 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:57:05] 2025-11-27 00:57:05,037 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:57:05]  *** Error codes and diagnostics ***
[2025-11-26 19:57:05]     "exeErrorCode": 0,
[2025-11-26 19:57:05]     "exeErrorDiag": "",
[2025-11-26 19:57:05]     "pilotErrorCode": 0,
[2025-11-26 19:57:05]     "pilotErrorDiag": "",
[2025-11-26 19:57:05]  *** Listing of results directory ***
[2025-11-26 19:57:05] total 1349632
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 01:20 pilot3.tar.gz
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 01:23 queuedata.json
[2025-11-26 19:57:05] -rwx------. 1 boincer umatlas     36292 Nov 24 01:25 runpilot2-wrapper.sh
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:57:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:13 run_atlas
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:13 job.xml
[2025-11-26 19:57:05] -rw-r--r--. 2 boincer umatlas 411992958 Nov 25 00:13 EVNT.47483658._001257.pool.root.1
[2025-11-26 19:57:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:13 start_atlas.sh
[2025-11-26 19:57:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:13 shared
[2025-11-26 19:57:05] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 00:13 input.tar.gz
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:13 boinc_lockfile
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:13 pandaJob.out
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas        57 Nov 25 00:13 setup.sh.local
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas    991801 Nov 25 00:15 agis_schedconf.cvmfs.json
[2025-11-26 19:57:05] drwx------. 5 boincer umatlas      4096 Nov 25 00:15 pilot3
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas       533 Nov 26 18:48 boinc_task_state.xml
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas      6843 Nov 26 19:48 init_data.xml
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas 920191137 Nov 26 19:52 HITS.47556149._002434.pool.root.1
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas      1059 Nov 26 19:55 memory_monitor_summary.json
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas   1516240 Nov 26 19:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas   3408581 Nov 26 19:55 log.47556149._002434.job.log.tgz.1
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas        95 Nov 26 19:56 pilot_heartbeat.json
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas      8634 Nov 26 19:56 heartbeat.json
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 19:57 boinc_mmap_file
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas        29 Nov 26 19:57 wrapper_checkpoint.txt
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas       823 Nov 26 19:57 pilotlog.txt
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas  19552875 Nov 26 19:57 log.47556149._002434.job.log.1
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas       353 Nov 26 19:57 output.list
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas       620 Nov 26 19:57 runtime_log
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas  22978560 Nov 26 19:57 result.tar.gz
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas       665 Nov 26 19:57 8fSMDm4Bfh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrVLKDmEuCBan.diag
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas      9354 Nov 26 19:57 runtime_log.err
[2025-11-26 19:57:05] -rw-r--r--. 1 boincer umatlas     21900 Nov 26 19:57 stderr.txt
[2025-11-26 19:57:05] HITS file was successfully produced:
[2025-11-26 19:57:05] -rw-------. 1 boincer umatlas 920191137 Nov 26 19:52 shared/HITS.pool.root.1
[2025-11-26 19:57:05]  *** Contents of shared directory: ***
[2025-11-26 19:57:06] total 1324008
[2025-11-26 19:57:06] -rw-r--r--. 2 boincer umatlas 411992958 Nov 25 00:13 ATLAS.root_0
[2025-11-26 19:57:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:13 start_atlas.sh
[2025-11-26 19:57:06] -rw-r--r--. 2 boincer umatlas    590108 Nov 25 00:13 input.tar.gz
[2025-11-26 19:57:06] -rw-------. 1 boincer umatlas 920191137 Nov 26 19:52 HITS.pool.root.1
[2025-11-26 19:57:06] -rw-------. 1 boincer umatlas  22978560 Nov 26 19:57 result.tar.gz
19:57:07 (3663151): run_atlas exited; CPU time 272216.434662
19:57:07 (3663151): called boinc_finish(0)

</stderr_txt>
]]>

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