Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:08 (4067061): wrapper (7.7.26015): starting
00:10:08 (4067061): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:10:08] Arguments: --nthreads 8
[2025-11-25 00:10:08] Threads: 8
[2025-11-25 00:10:08] Checking for CVMFS
[2025-11-25 00:10:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:10:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:10:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:10:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:10:10] 2.13.3.0 10954 28170 380644 153270 2 178 31949268 32935936 27176 16776704 26 124219282 99.462 184149323 39944 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:10:10] CVMFS is ok
[2025-11-25 00:10:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:10:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:10:10] Further information can be found at the LHC@home message board.
[2025-11-25 00:10:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:10:10] Checking for apptainer binary...
[2025-11-25 00:10:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:10:10] Running /usr/bin/apptainer --version
[2025-11-25 00:10:10] apptainer version 1.4.4-1.el9
[2025-11-25 00:10:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:10:10] c7-11-13.aglt2.org
[2025-11-25 00:10:10] apptainer works
[2025-11-25 00:10:10] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:10:10] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:10:10] Starting ATLAS job with PandaID=6896044259
[2025-11-25 00:10:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 07:27:00]  *** The last 200 lines of the pilot log: ***
[2025-11-26 07:27:00] 2025-11-26 12:25:50,322 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 07:27:00] 2025-11-26 12:25:50,326 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3284.3535937499996
[2025-11-26 07:27:00] 2025-11-26 12:25:50,337 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6896044259/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,337 | INFO     | extracted standard info from prmon json
[2025-11-26 07:27:00] 2025-11-26 12:25:50,338 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 07:27:00] 2025-11-26 12:25:50,338 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 07:27:00] 2025-11-26 12:25:50,364 | INFO     | fitting pss+swap vs Time
[2025-11-26 07:27:00] 2025-11-26 12:25:50,366 | INFO     | sum of square deviations: 1944342045101.7432
[2025-11-26 07:27:00] 2025-11-26 12:25:50,427 | INFO     | sum of deviations: 7994752095799.793
[2025-11-26 07:27:00] 2025-11-26 12:25:50,427 | INFO     | mean x: 1764103683.2521691
[2025-11-26 07:27:00] 2025-11-26 12:25:50,427 | INFO     | mean y: 2898445.0542299347
[2025-11-26 07:27:00] 2025-11-26 12:25:50,427 | INFO     | intersect: -7250748954.290264
[2025-11-26 07:27:00] 2025-11-26 12:25:50,429 | INFO     | chi2: 9.796127998714661
[2025-11-26 07:27:00] 2025-11-26 12:25:50,430 | INFO     | sum of square deviations: 1928570065036.347
[2025-11-26 07:27:00] 2025-11-26 12:25:50,495 | INFO     | sum of deviations: 8636572142327.425
[2025-11-26 07:27:00] 2025-11-26 12:25:50,495 | INFO     | mean x: 1764103530.7569332
[2025-11-26 07:27:00] 2025-11-26 12:25:50,495 | INFO     | mean y: 2904650.515497553
[2025-11-26 07:27:00] 2025-11-26 12:25:50,495 | INFO     | intersect: -7897149221.589813
[2025-11-26 07:27:00] 2025-11-26 12:25:50,497 | INFO     | chi2: 6.419590477777567
[2025-11-26 07:27:00] 2025-11-26 12:25:50,497 | INFO     | current chi2=6.419590477777567 (change=34.468082913781096 %)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,499 | INFO     | sum of square deviations: 1912883621458.3748
[2025-11-26 07:27:00] 2025-11-26 12:25:50,565 | INFO     | sum of deviations: 9272191912691.465
[2025-11-26 07:27:00] 2025-11-26 12:25:50,568 | INFO     | mean x: 1764103378.261723
[2025-11-26 07:27:00] 2025-11-26 12:25:50,568 | INFO     | mean y: 2910828.026172301
[2025-11-26 07:27:00] 2025-11-26 12:25:50,568 | INFO     | intersect: -8548108634.7258
[2025-11-26 07:27:00] 2025-11-26 12:25:50,570 | INFO     | chi2: 3.0223363552660523
[2025-11-26 07:27:00] 2025-11-26 12:25:50,570 | INFO     | current chi2=3.0223363552660523 (change=52.920106574892124 %)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,572 | INFO     | sum of square deviations: 1897282146916.9072
[2025-11-26 07:27:00] 2025-11-26 12:25:50,634 | INFO     | sum of deviations: 9492461956507.75
[2025-11-26 07:27:00] 2025-11-26 12:25:50,635 | INFO     | mean x: 1764103225.7648988
[2025-11-26 07:27:00] 2025-11-26 12:25:50,635 | INFO     | mean y: 2912980.3668671404
[2025-11-26 07:27:00] 2025-11-26 12:25:50,635 | INFO     | intersect: -8823229607.406765
[2025-11-26 07:27:00] 2025-11-26 12:25:50,636 | INFO     | chi2: 2.441659675558608
[2025-11-26 07:27:00] 2025-11-26 12:25:50,636 | INFO     | current chi2=2.441659675558608 (change=19.212841042516192 %)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,636 | INFO     | right removable region: 1828
[2025-11-26 07:27:00] 2025-11-26 12:25:50,638 | INFO     | sum of square deviations: 1928568318733.3735
[2025-11-26 07:27:00] 2025-11-26 12:25:50,699 | INFO     | sum of deviations: 7533780596971.689
[2025-11-26 07:27:00] 2025-11-26 12:25:50,699 | INFO     | mean x: 1764103835.7558455
[2025-11-26 07:27:00] 2025-11-26 12:25:50,699 | INFO     | mean y: 2902898.0995106036
[2025-11-26 07:27:00] 2025-11-26 12:25:50,699 | INFO     | intersect: -6888411824.7252655
[2025-11-26 07:27:00] 2025-11-26 12:25:50,701 | INFO     | chi2: 7.857315011195242
[2025-11-26 07:27:00] 2025-11-26 12:25:50,701 | INFO     | current chi2=7.857315011195242 (change=19.791625709400783 %)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,701 | INFO     | left removable region: 10
[2025-11-26 07:27:00] 2025-11-26 12:25:50,703 | INFO     | sum of square deviations: 1863255602669.932
[2025-11-26 07:27:00] 2025-11-26 12:25:50,780 | INFO     | sum of deviations: 8891038524617.693
[2025-11-26 07:27:00] 2025-11-26 12:25:50,780 | INFO     | mean x: 1764103500.269527
[2025-11-26 07:27:00] 2025-11-26 12:25:50,780 | INFO     | mean y: 2918871.0863586357
[2025-11-26 07:27:00] 2025-11-26 12:25:50,780 | INFO     | intersect: -8414988022.543289
[2025-11-26 07:27:00] 2025-11-26 12:25:50,782 | INFO     | chi2: 0.43520425793374135
[2025-11-26 07:27:00] 2025-11-26 12:25:50,782 | INFO     | current memory leak: 4.77 B/s (using 1818 data points, chi2=0.44)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | could have reported an average CPU frequency of 3283 MHz (65 samples)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | ..............................
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | . Timing measurements:
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | . get job = 0 s
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | . initial setup = 3 s
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | . payload setup = 11 s
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | . stage-in = 0 s
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | . payload execution = 112467 s
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | . stage-out = 3 s
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | . log creation = 1 s
[2025-11-26 07:27:00] 2025-11-26 12:25:50,784 | INFO     | ..............................
[2025-11-26 07:27:00] 2025-11-26 12:25:50,873 | INFO     | 
[2025-11-26 07:27:00] 2025-11-26 12:25:50,873 | INFO     | job summary report
[2025-11-26 07:27:00] 2025-11-26 12:25:50,874 | INFO     | --------------------------------------------------
[2025-11-26 07:27:00] 2025-11-26 12:25:50,874 | INFO     | PanDA job id: 6896044259
[2025-11-26 07:27:00] 2025-11-26 12:25:50,874 | INFO     | task id: 47556173
[2025-11-26 07:27:00] 2025-11-26 12:25:50,874 | INFO     | errors: (none)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,874 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 07:27:00] 2025-11-26 12:25:50,874 | INFO     | pilot state: finished 
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | transexitcode: 0
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | exeerrorcode: 0
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | exeerrordiag: 
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | exitcode: 0
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | exitmsg: OK
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | cpuconsumptiontime: 201309 s
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | nevents: 1000
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | neventsw: 0
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | pid: 4102180
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | pgrp: 4102180
[2025-11-26 07:27:00] 2025-11-26 12:25:50,885 | INFO     | corecount: 8
[2025-11-26 07:27:00] 2025-11-26 12:25:50,886 | INFO     | event service: False
[2025-11-26 07:27:00] 2025-11-26 12:25:50,886 | INFO     | sizes: {0: 2284078, 1: 2284277, 11: 2284567, 112483: 2361821, 112488: 2370820, 112490: 2370876, 112501: 2371346}
[2025-11-26 07:27:00] 2025-11-26 12:25:50,886 | INFO     | --------------------------------------------------
[2025-11-26 07:27:00] 2025-11-26 12:25:50,886 | INFO     | 
[2025-11-26 07:27:00] 2025-11-26 12:25:50,886 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-26 07:27:00] 2025-11-26 12:25:50,926 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 07:27:00] 2025-11-26 12:25:50,928 | INFO     | job 6896044259 has completed (purged errors)
[2025-11-26 07:27:00] 2025-11-26 12:25:50,928 | INFO     | overall cleanup function is called
[2025-11-26 07:27:00] 2025-11-26 12:25:51,643 | INFO     | PID=4077183 has CPU usage=18.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 07:27:00] 2025-11-26 12:25:51,643 | INFO     | .. there are 34 such processes running
[2025-11-26 07:27:00] 2025-11-26 12:25:51,971 | INFO     | --- collectZombieJob: --- 10, [4102180]
[2025-11-26 07:27:00] 2025-11-26 12:25:51,971 | INFO     | zombie collector waiting for pid 4102180
[2025-11-26 07:27:00] 2025-11-26 12:25:51,971 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 07:27:00] 2025-11-26 12:25:51,971 | INFO     | collected zombie processes
[2025-11-26 07:27:00] 2025-11-26 12:25:51,971 | INFO     | will attempt to kill all subprocesses of pid=4102180
[2025-11-26 07:27:00] 2025-11-26 12:25:52,391 | INFO     | process IDs to be killed: [4102180] (in reverse order)
[2025-11-26 07:27:00] 2025-11-26 12:25:52,554 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 07:27:00] 2025-11-26 12:25:52,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 07:27:00] 2025-11-26 12:25:52,576 | INFO     | did not find any defunct processes belonging to 4102180
[2025-11-26 07:27:00] 2025-11-26 12:25:52,598 | INFO     | did not find any defunct processes belonging to 4102180
[2025-11-26 07:27:00] 2025-11-26 12:25:52,599 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 07:27:00] 2025-11-26 12:25:52,599 | INFO     | ready for new job
[2025-11-26 07:27:00] 2025-11-26 12:25:52,599 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 07:27:00] 2025-11-26 12:25:52,609 | INFO     | ***************************************
[2025-11-26 07:27:00] 2025-11-26 12:25:52,609 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 07:27:00] 2025-11-26 12:25:52,609 | INFO     | ***************************************
[2025-11-26 07:27:00] 2025-11-26 12:25:52,609 | INFO     | 
[2025-11-26 07:27:00] 2025-11-26 12:25:52,613 | INFO     | architecture information:
[2025-11-26 07:27:00] 2025-11-26 12:25:52,620 | INFO     | executing command: cat /etc/os-release
[2025-11-26 07:27:00] 2025-11-26 12:25:52,641 | INFO     | cat /etc/os-release:
[2025-11-26 07:27:00] NAME="CentOS Linux"
[2025-11-26 07:27:00] VERSION="7 (Core)"
[2025-11-26 07:27:00] ID="centos"
[2025-11-26 07:27:00] ID_LIKE="rhel fedora"
[2025-11-26 07:27:00] VERSION_ID="7"
[2025-11-26 07:27:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 07:27:00] ANSI_COLOR="0;31"
[2025-11-26 07:27:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 07:27:00] HOME_URL="https://www.centos.org/"
[2025-11-26 07:27:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 07:27:00] 
[2025-11-26 07:27:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 07:27:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 07:27:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 07:27:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 07:27:00] 
[2025-11-26 07:27:00] 2025-11-26 12:25:52,641 | INFO     | ***************************************
[2025-11-26 07:27:00] 2025-11-26 12:25:53,144 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-26 07:27:00] 2025-11-26 12:25:53,167 | INFO     | sufficient remaining disk space (89945800704 B)
[2025-11-26 07:27:00] 2025-11-26 12:25:53,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 07:27:00] 2025-11-26 12:25:53,168 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 07:27:00] 2025-11-26 12:25:53,168 | INFO     | update_server=False
[2025-11-26 07:27:00] 2025-11-26 12:25:53,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 07:27:00] 2025-11-26 12:25:53,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 07:27:00] 2025-11-26 12:25:53,169 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:27:00] 2025-11-26 12:25:53,169 | INFO     | aborting loop
[2025-11-26 07:27:00] 2025-11-26 12:25:53,290 | INFO     | all payload control threads have been joined
[2025-11-26 07:27:00] 2025-11-26 12:25:53,359 | INFO     | all data control threads have been joined
[2025-11-26 07:27:00] 2025-11-26 12:25:54,175 | INFO     | [job] job monitor thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:54,181 | INFO     | [job] retrieve thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:54,273 | INFO     | [job] validate thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:54,295 | INFO     | [payload] control thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:54,367 | INFO     | [data] control thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:54,571 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:54,572 | INFO     | all job control threads have been joined
[2025-11-26 07:27:00] 2025-11-26 12:25:54,915 [wrapper] supervise_pilot (15 min periods counter: 126)
[2025-11-26 07:27:00] 2025-11-26 12:25:54,956 | INFO     | [data] copytool_in thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:55,099 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:55,183 | INFO     | [data] copytool_out thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:55,430 | INFO     | [payload] validate_post thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:55,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 07:27:00] 2025-11-26 12:25:55,578 | INFO     | [job] control thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:55,614 | INFO     | [payload] failed_post thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:55,620 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:55,632 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:55,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 07:27:00] 2025-11-26 12:25:56,944 | INFO     | [job] queue monitor thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:25:59,498 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 07:27:00] 2025-11-26 12:26:24,714 | INFO     | PID=4077183 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 07:27:00] 2025-11-26 12:26:24,714 | INFO     | .. there are 34 such processes running
[2025-11-26 07:27:00] 2025-11-26 12:26:24,715 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 07:27:00] 2025-11-26 12:26:24,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 07:27:00] 2025-11-26 12:26:24,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 07:27:00] 2025-11-26 12:26:52,776 | INFO     | [monitor] cgroup control has ended
[2025-11-26 07:27:00] 2025-11-26 12:26:54,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140175492081472)>', '<ExcThread(monitor, started 140174730172160)>']
[2025-11-26 07:27:00] 2025-11-26 12:26:54,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 07:27:00] 2025-11-26 12:26:54,931 | INFO     | [monitor] control thread has ended
[2025-11-26 07:27:00] 2025-11-26 12:26:59,422 | INFO     | all workflow threads have been joined
[2025-11-26 07:27:00] 2025-11-26 12:26:59,422 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 07:27:00] 2025-11-26 12:26:59,422 | INFO     | traces error code: 0
[2025-11-26 07:27:00] 2025-11-26 12:26:59,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 07:27:00] 2025-11-26 12:26:59,922 [wrapper] ==== pilot stdout END ====
[2025-11-26 07:27:00] 2025-11-26 12:26:59,952 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 07:27:00] 2025-11-26 12:27:00,005 [wrapper] pilotpid: 4077183
[2025-11-26 07:27:00] 2025-11-26 12:27:00,093 [wrapper] Pilot exit status: 0
[2025-11-26 07:27:00] 2025-11-26 12:27:00,150 [wrapper] pandaids: 6896044259
[2025-11-26 07:27:00] 2025-11-26 12:27:00,258 [wrapper] cleanup supervisor_pilot 2549155 4077184
[2025-11-26 07:27:00] 2025-11-26 12:27:00,262 [wrapper] Test setup, not cleaning
[2025-11-26 07:27:00] 2025-11-26 12:27:00,266 [wrapper] apfmon messages muted
[2025-11-26 07:27:00] 2025-11-26 12:27:00,270 [wrapper] ==== wrapper stdout END ====
[2025-11-26 07:27:00] 2025-11-26 12:27:00,273 [wrapper] ==== wrapper stderr END ====
[2025-11-26 07:27:00]  *** Error codes and diagnostics ***
[2025-11-26 07:27:00]     "exeErrorCode": 0,
[2025-11-26 07:27:00]     "exeErrorDiag": "",
[2025-11-26 07:27:00]     "pilotErrorCode": 0,
[2025-11-26 07:27:00]     "pilotErrorDiag": "",
[2025-11-26 07:27:00]  *** Listing of results directory ***
[2025-11-26 07:27:00] total 1315040
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 13:03 queuedata.json
[2025-11-26 07:27:00] -rwx------. 1 boincer umatlas     36292 Nov 24 13:06 runpilot2-wrapper.sh
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 07:27:00] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:10 run_atlas
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:10 job.xml
[2025-11-26 07:27:00] -rw-r--r--. 2 boincer umatlas 407152057 Nov 25 00:10 EVNT.47483658._003027.pool.root.1
[2025-11-26 07:27:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:10 start_atlas.sh
[2025-11-26 07:27:00] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:10 shared
[2025-11-26 07:27:00] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:10 input.tar.gz
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:10 boinc_lockfile
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas      2780 Nov 25 00:10 pandaJob.out
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas        57 Nov 25 00:10 setup.sh.local
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas    991801 Nov 25 00:10 agis_schedconf.cvmfs.json
[2025-11-26 07:27:00] drwx------. 5 boincer umatlas      4096 Nov 25 00:10 pilot3
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas       532 Nov 26 07:09 boinc_task_state.xml
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas      6906 Nov 26 07:22 init_data.xml
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas 901461843 Nov 26 07:24 HITS.47556173._000091.pool.root.1
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas      1059 Nov 26 07:25 memory_monitor_summary.json
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas   1516240 Nov 26 07:25 agis_ddmendpoints.agis.ALL.json
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas   2740871 Nov 26 07:25 log.47556173._000091.job.log.tgz.1
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas      8592 Nov 26 07:25 heartbeat.json
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas        95 Nov 26 07:26 pilot_heartbeat.json
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 07:26 boinc_mmap_file
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas        29 Nov 26 07:26 wrapper_checkpoint.txt
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas      4824 Nov 26 07:26 pilotlog.txt
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas  14288399 Nov 26 07:27 log.47556173._000091.job.log.1
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas       353 Nov 26 07:27 output.list
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas       620 Nov 26 07:27 runtime_log
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas  17049600 Nov 26 07:27 result.tar.gz
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas       666 Nov 26 07:27 SwxLDm87ph8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmT9IKDmrSLdQm.diag
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas      9344 Nov 26 07:27 runtime_log.err
[2025-11-26 07:27:00] -rw-r--r--. 1 boincer umatlas     21075 Nov 26 07:27 stderr.txt
[2025-11-26 07:27:00] HITS file was successfully produced:
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas 901461843 Nov 26 07:24 shared/HITS.pool.root.1
[2025-11-26 07:27:00]  *** Contents of shared directory: ***
[2025-11-26 07:27:00] total 1295204
[2025-11-26 07:27:00] -rw-r--r--. 2 boincer umatlas 407152057 Nov 25 00:10 ATLAS.root_0
[2025-11-26 07:27:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:10 start_atlas.sh
[2025-11-26 07:27:00] -rw-r--r--. 2 boincer umatlas    590102 Nov 25 00:10 input.tar.gz
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas 901461843 Nov 26 07:24 HITS.pool.root.1
[2025-11-26 07:27:00] -rw-------. 1 boincer umatlas  17049600 Nov 26 07:27 result.tar.gz
07:27:02 (4067061): run_atlas exited; CPU time 202281.744795
07:27:02 (4067061): called boinc_finish(0)

</stderr_txt>
]]>

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