Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:10:22 (1054112): wrapper (7.7.26015): starting
02:10:22 (1054112): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 02:10:22] Arguments: --nthreads 9
[2025-11-25 02:10:22] Threads: 9
[2025-11-25 02:10:22] Checking for CVMFS
[2025-11-25 02:10:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:10:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:10:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:10:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:10:25] 2.13.3.0 13172 28293 381404 153274 0 78 29080916 32935937 39843 16776704 0 146740913 99.539 161422151 35276 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 02:10:25] CVMFS is ok
[2025-11-25 02:10:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 02:10:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 02:10:25] Further information can be found at the LHC@home message board.
[2025-11-25 02:10:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:10:25] Checking for apptainer binary...
[2025-11-25 02:10:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:10:25] Running /usr/bin/apptainer --version
[2025-11-25 02:10:25] apptainer version 1.4.4-1.el9
[2025-11-25 02:10:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:10:26] c6-6-8-3.aglt2.org
[2025-11-25 02:10:26] apptainer works
[2025-11-25 02:10:26] Set ATHENA_PROC_NUMBER=9
[2025-11-25 02:10:26] Set ATHENA_CORE_NUMBER=9
[2025-11-25 02:10:26] Starting ATLAS job with PandaID=6895366610
[2025-11-25 02:10:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 10:57:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 10:57:18] 2025-11-26 15:56:05,275 | INFO     | monitor loop #6959: job 0:6895366610 is in state 'finished'
[2025-11-26 10:57:18] 2025-11-26 15:56:05,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:57:18] 2025-11-26 15:56:07,001 | INFO     | time since job start (117866s) is within the limit (172800.0s)
[2025-11-26 10:57:18] 2025-11-26 15:56:07,780 | INFO     | monitor loop #6960: job 0:6895366610 is in state 'finished'
[2025-11-26 10:57:18] 2025-11-26 15:56:07,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:57:18] 2025-11-26 15:56:09,008 | INFO     | time since job start (117868s) is within the limit (172800.0s)
[2025-11-26 10:57:18] 2025-11-26 15:56:10,285 | INFO     | monitor loop #6961: job 0:6895366610 is in state 'finished'
[2025-11-26 10:57:18] 2025-11-26 15:56:10,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:57:18] 2025-11-26 15:56:11,023 | INFO     | time since job start (117870s) is within the limit (172800.0s)
[2025-11-26 10:57:18] 2025-11-26 15:56:12,837 | INFO     | monitor loop #6962: job 0:6895366610 is in state 'finished'
[2025-11-26 10:57:18] 2025-11-26 15:56:12,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:57:18] 2025-11-26 15:56:13,979 | INFO     | PID=1062077 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:57:18] 2025-11-26 15:56:13,979 | INFO     | .. there are 54 such processes running
[2025-11-26 10:57:18] 2025-11-26 15:56:14,983 | INFO     | time since job start (117873s) is within the limit (172800.0s)
[2025-11-26 10:57:18] 2025-11-26 15:56:15,367 | INFO     | monitor loop #6963: job 0:6895366610 is in state 'finished'
[2025-11-26 10:57:18] 2025-11-26 15:56:15,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 10:57:18] 2025-11-26 15:56:15,473 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 10:57:18] 2025-11-26 15:56:15,497 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2681.7314999999994
[2025-11-26 10:57:18] 2025-11-26 15:56:15,529 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895366610/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 10:57:18] 2025-11-26 15:56:15,530 | INFO     | extracted standard info from prmon json
[2025-11-26 10:57:18] 2025-11-26 15:56:15,530 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 10:57:18] 2025-11-26 15:56:15,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 10:57:18] 2025-11-26 15:56:15,589 | INFO     | fitting pss+swap vs Time
[2025-11-26 10:57:18] 2025-11-26 15:56:15,596 | INFO     | sum of square deviations: 2229280379008.3833
[2025-11-26 10:57:18] 2025-11-26 15:56:15,743 | INFO     | sum of deviations: 7022581944333.733
[2025-11-26 10:57:18] 2025-11-26 15:56:15,743 | INFO     | mean x: 1764113677.3632123
[2025-11-26 10:57:18] 2025-11-26 15:56:15,747 | INFO     | mean y: 3064500.5880829017
[2025-11-26 10:57:18] 2025-11-26 15:56:15,747 | INFO     | intersect: -5554169562.501696
[2025-11-26 10:57:18] 2025-11-26 15:56:15,750 | INFO     | chi2: 16.693207384268838
[2025-11-26 10:57:18] 2025-11-26 15:56:15,756 | INFO     | sum of square deviations: 2212003001371.067
[2025-11-26 10:57:18] 2025-11-26 15:56:15,910 | INFO     | sum of deviations: 7701060489772.059
[2025-11-26 10:57:18] 2025-11-26 15:56:15,910 | INFO     | mean x: 1764113524.8774025
[2025-11-26 10:57:18] 2025-11-26 15:56:15,911 | INFO     | mean y: 3070487.9875324676
[2025-11-26 10:57:18] 2025-11-26 15:56:15,911 | INFO     | intersect: -6138668450.650953
[2025-11-26 10:57:18] 2025-11-26 15:56:15,913 | INFO     | chi2: 13.562824753583767
[2025-11-26 10:57:18] 2025-11-26 15:56:15,917 | INFO     | current chi2=13.562824753583767 (change=18.752433601436277 %)
[2025-11-26 10:57:18] 2025-11-26 15:56:15,917 | INFO     | right removable region: 1924
[2025-11-26 10:57:18] 2025-11-26 15:56:15,920 | INFO     | sum of square deviations: 2211996333683.551
[2025-11-26 10:57:18] 2025-11-26 15:56:16,077 | INFO     | sum of deviations: 6264208704216.178
[2025-11-26 10:57:18] 2025-11-26 15:56:16,077 | INFO     | mean x: 1764113829.8784416
[2025-11-26 10:57:18] 2025-11-26 15:56:16,077 | INFO     | mean y: 3071191.500779221
[2025-11-26 10:57:18] 2025-11-26 15:56:16,077 | INFO     | intersect: -4992767653.290724
[2025-11-26 10:57:18] 2025-11-26 15:56:16,080 | INFO     | chi2: 13.24880578349531
[2025-11-26 10:57:18] 2025-11-26 15:56:16,080 | INFO     | current chi2=13.24880578349531 (change=20.633551848277072 %)
[2025-11-26 10:57:18] 2025-11-26 15:56:16,084 | INFO     | left removable region: 10
[2025-11-26 10:57:18] 2025-11-26 15:56:16,087 | INFO     | sum of square deviations: 2174294441503.224
[2025-11-26 10:57:18] 2025-11-26 15:56:16,241 | INFO     | sum of deviations: 6726494845089.867
[2025-11-26 10:57:18] 2025-11-26 15:56:16,241 | INFO     | mean x: 1764113799.4106584
[2025-11-26 10:57:18] 2025-11-26 15:56:16,242 | INFO     | mean y: 3081587.4670846397
[2025-11-26 10:57:18] 2025-11-26 15:56:16,242 | INFO     | intersect: -5454460018.390025
[2025-11-26 10:57:18] 2025-11-26 15:56:16,244 | INFO     | chi2: 8.715999276530745
[2025-11-26 10:57:18] 2025-11-26 15:56:16,244 | INFO     | current memory leak: 3.09 B/s (using 1914 data points, chi2=8.72)
[2025-11-26 10:57:18] 2025-11-26 15:56:16,249 | INFO     | could have reported an average CPU frequency of 2691 MHz (68 samples)
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | ..............................
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | . Timing measurements:
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | . get job = 0 s
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | . initial setup = 7 s
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | . payload setup = 40 s
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | . stage-in = 0 s
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | . payload execution = 117719 s
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | . stage-out = 8 s
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | . log creation = 1 s
[2025-11-26 10:57:18] 2025-11-26 15:56:16,250 | INFO     | ..............................
[2025-11-26 10:57:18] 2025-11-26 15:56:16,447 | INFO     | 
[2025-11-26 10:57:18] 2025-11-26 15:56:16,448 | INFO     | job summary report
[2025-11-26 10:57:18] 2025-11-26 15:56:16,448 | INFO     | --------------------------------------------------
[2025-11-26 10:57:18] 2025-11-26 15:56:16,448 | INFO     | PanDA job id: 6895366610
[2025-11-26 10:57:18] 2025-11-26 15:56:16,448 | INFO     | task id: 47556137
[2025-11-26 10:57:18] 2025-11-26 15:56:16,448 | INFO     | errors: (none)
[2025-11-26 10:57:18] 2025-11-26 15:56:16,448 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 10:57:18] 2025-11-26 15:56:16,448 | INFO     | pilot state: finished 
[2025-11-26 10:57:18] 2025-11-26 15:56:16,448 | INFO     | transexitcode: 0
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | exeerrorcode: 0
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | exeerrordiag: 
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | exitcode: 0
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | exitmsg: OK
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | cpuconsumptiontime: 276982 s
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | nevents: 1000
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | neventsw: 0
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | pid: 1077059
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | pgrp: 1077059
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | corecount: 9
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | event service: False
[2025-11-26 10:57:18] 2025-11-26 15:56:16,449 | INFO     | sizes: {0: 2284083, 1: 2284338, 2: 2284338, 13: 2284366, 24: 2284422, 31: 2284712, 35: 2284868, 117764: 2364003, 117765: 2364002, 117774: 2373057, 117777: 2373113,
[2025-11-26 10:57:18] 2025-11-26 15:56:16,450 | INFO     | --------------------------------------------------
[2025-11-26 10:57:18] 2025-11-26 15:56:16,450 | INFO     | 
[2025-11-26 10:57:18] 2025-11-26 15:56:16,450 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 10:57:18] 2025-11-26 15:56:16,521 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | job 6895366610 has completed (purged errors)
[2025-11-26 10:57:18] 2025-11-26 15:56:16,523 | INFO     | overall cleanup function is called
[2025-11-26 10:57:18] 2025-11-26 15:56:17,556 | INFO     | --- collectZombieJob: --- 10, [1077059]
[2025-11-26 10:57:18] 2025-11-26 15:56:17,556 | INFO     | zombie collector waiting for pid 1077059
[2025-11-26 10:57:18] 2025-11-26 15:56:17,557 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 10:57:18] 2025-11-26 15:56:17,557 | INFO     | collected zombie processes
[2025-11-26 10:57:18] 2025-11-26 15:56:17,557 | INFO     | will attempt to kill all subprocesses of pid=1077059
[2025-11-26 10:57:18] 2025-11-26 15:56:21,198 | INFO     | process IDs to be killed: [1077059] (in reverse order)
[2025-11-26 10:57:18] 2025-11-26 15:56:21,511 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 10:57:18] 2025-11-26 15:56:21,511 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 10:57:18] 2025-11-26 15:56:21,542 | INFO     | did not find any defunct processes belonging to 1077059
[2025-11-26 10:57:18] 2025-11-26 15:56:21,566 | INFO     | did not find any defunct processes belonging to 1077059
[2025-11-26 10:57:18] 2025-11-26 15:56:21,574 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 10:57:18] 2025-11-26 15:56:21,575 | INFO     | ready for new job
[2025-11-26 10:57:18] 2025-11-26 15:56:21,575 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 10:57:18] 2025-11-26 15:56:21,591 | INFO     | ***************************************
[2025-11-26 10:57:18] 2025-11-26 15:56:21,591 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 10:57:18] 2025-11-26 15:56:21,591 | INFO     | ***************************************
[2025-11-26 10:57:18] 2025-11-26 15:56:21,591 | INFO     | 
[2025-11-26 10:57:18] 2025-11-26 15:56:21,597 | INFO     | architecture information:
[2025-11-26 10:57:18] 2025-11-26 15:56:21,601 | INFO     | executing command: cat /etc/os-release
[2025-11-26 10:57:18] 2025-11-26 15:56:21,683 | INFO     | cat /etc/os-release:
[2025-11-26 10:57:18] NAME="CentOS Linux"
[2025-11-26 10:57:18] VERSION="7 (Core)"
[2025-11-26 10:57:18] ID="centos"
[2025-11-26 10:57:18] ID_LIKE="rhel fedora"
[2025-11-26 10:57:18] VERSION_ID="7"
[2025-11-26 10:57:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 10:57:18] ANSI_COLOR="0;31"
[2025-11-26 10:57:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 10:57:18] HOME_URL="https://www.centos.org/"
[2025-11-26 10:57:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 10:57:18] 
[2025-11-26 10:57:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 10:57:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 10:57:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 10:57:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 10:57:18] 
[2025-11-26 10:57:18] 2025-11-26 15:56:21,683 | INFO     | ***************************************
[2025-11-26 10:57:18] 2025-11-26 15:56:22,186 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 10:57:18] 2025-11-26 15:56:22,277 | INFO     | sufficient remaining disk space (85369815040 B)
[2025-11-26 10:57:18] 2025-11-26 15:56:22,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 10:57:18] 2025-11-26 15:56:22,278 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 10:57:18] 2025-11-26 15:56:22,278 | INFO     | update_server=False
[2025-11-26 10:57:18] 2025-11-26 15:56:22,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 10:57:18] 2025-11-26 15:56:22,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:57:18] 2025-11-26 15:56:22,278 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 10:57:18] 2025-11-26 15:56:22,279 | INFO     | aborting loop
[2025-11-26 10:57:18] 2025-11-26 15:56:22,714 | INFO     | all payload control threads have been joined
[2025-11-26 10:57:18] 2025-11-26 15:56:23,086 | INFO     | all data control threads have been joined
[2025-11-26 10:57:18] 2025-11-26 15:56:23,284 | INFO     | [job] retrieve thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:23,284 | INFO     | [job] queue monitor thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:23,285 | INFO     | [job] job monitor thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:23,376 | INFO     | all job control threads have been joined
[2025-11-26 10:57:18] 2025-11-26 15:56:23,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 10:57:18] 2025-11-26 15:56:23,721 | INFO     | [payload] control thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:23,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:23,947 | INFO     | [job] validate thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:24,091 | INFO     | [data] control thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:24,209 | INFO     | [data] copytool_in thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:24,276 | INFO     | [payload] validate_post thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:24,384 | INFO     | [job] control thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:24,483 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:24,529 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:24,649 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:24,783 | INFO     | [payload] failed_post thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:25,481 | INFO     | [data] copytool_out thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:25,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 10:57:18] 2025-11-26 15:56:29,810 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 10:57:18] 2025-11-26 15:56:42,714 [wrapper] supervise_pilot (15 min periods counter: 132)
[2025-11-26 10:57:18] 2025-11-26 15:56:49,643 | INFO     | PID=1062077 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 10:57:18] 2025-11-26 15:56:49,643 | INFO     | .. there are 54 such processes running
[2025-11-26 10:57:18] 2025-11-26 15:56:49,644 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 10:57:18] 2025-11-26 15:56:49,644 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 10:57:18] 2025-11-26 15:56:49,644 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 10:57:18] 2025-11-26 15:57:11,145 | INFO     | [monitor] cgroup control has ended
[2025-11-26 10:57:18] 2025-11-26 15:57:11,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067531970368)>', '<ExcThread(monitor, started 140067045623552)>']
[2025-11-26 10:57:18] 2025-11-26 15:57:12,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 10:57:18] 2025-11-26 15:57:12,800 | INFO     | [monitor] control thread has ended
[2025-11-26 10:57:18] 2025-11-26 15:57:17,019 | INFO     | all workflow threads have been joined
[2025-11-26 10:57:18] 2025-11-26 15:57:17,019 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 10:57:18] 2025-11-26 15:57:17,020 | INFO     | traces error code: 0
[2025-11-26 10:57:18] 2025-11-26 15:57:17,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 10:57:18] 2025-11-26 15:57:17,584 [wrapper] ==== pilot stdout END ====
[2025-11-26 10:57:18] 2025-11-26 15:57:17,603 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 10:57:18] 2025-11-26 15:57:17,649 [wrapper] pilotpid: 1062077
[2025-11-26 10:57:18] 2025-11-26 15:57:17,669 [wrapper] Pilot exit status: 0
[2025-11-26 10:57:18] 2025-11-26 15:57:17,803 [wrapper] pandaids: 6895366610
[2025-11-26 10:57:18] 2025-11-26 15:57:18,088 [wrapper] cleanup supervisor_pilot  810320 1062078
[2025-11-26 10:57:18] 2025-11-26 15:57:18,131 [wrapper] Test setup, not cleaning
[2025-11-26 10:57:18] 2025-11-26 15:57:18,170 [wrapper] apfmon messages muted
[2025-11-26 10:57:18] 2025-11-26 15:57:18,180 [wrapper] ==== wrapper stdout END ====
[2025-11-26 10:57:18] 2025-11-26 15:57:18,207 [wrapper] ==== wrapper stderr END ====
[2025-11-26 10:57:18]  *** Error codes and diagnostics ***
[2025-11-26 10:57:18]     "exeErrorCode": 0,
[2025-11-26 10:57:18]     "exeErrorDiag": "",
[2025-11-26 10:57:18]     "pilotErrorCode": 0,
[2025-11-26 10:57:18]     "pilotErrorDiag": "",
[2025-11-26 10:57:18]  *** Listing of results directory ***
[2025-11-26 10:57:18] total 1326696
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 13:33 pilot3.tar.gz
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 13:43 queuedata.json
[2025-11-26 10:57:18] -rwx------. 1 boincer umatlas     36292 Nov 23 13:44 runpilot2-wrapper.sh
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas       100 Nov 25 02:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 10:57:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 02:10 run_atlas
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas       105 Nov 25 02:10 job.xml
[2025-11-26 10:57:18] -rw-r--r--. 2 boincer umatlas 412329127 Nov 25 02:10 EVNT.47483658._000846.pool.root.1
[2025-11-26 10:57:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 02:10 start_atlas.sh
[2025-11-26 10:57:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 02:10 shared
[2025-11-26 10:57:18] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 02:10 input.tar.gz
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas         0 Nov 25 02:10 boinc_lockfile
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 02:10 pandaJob.out
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas        57 Nov 25 02:10 setup.sh.local
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas    991801 Nov 25 02:11 agis_schedconf.cvmfs.json
[2025-11-26 10:57:18] drwx------. 5 boincer umatlas      4096 Nov 25 02:11 pilot3
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas       533 Nov 26 10:20 boinc_task_state.xml
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas      6880 Nov 26 10:54 init_data.xml
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas 907112477 Nov 26 10:54 HITS.47556137._008326.pool.root.1
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas      1064 Nov 26 10:55 memory_monitor_summary.json
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas   1516240 Nov 26 10:55 agis_ddmendpoints.agis.ALL.json
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas   2913651 Nov 26 10:55 log.47556137._008326.job.log.tgz.1
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas      8624 Nov 26 10:56 heartbeat.json
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas        95 Nov 26 10:56 pilot_heartbeat.json
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 10:57 boinc_mmap_file
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas      4824 Nov 26 10:57 pilotlog.txt
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas        29 Nov 26 10:57 wrapper_checkpoint.txt
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas  14671248 Nov 26 10:57 log.47556137._008326.job.log.1
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas       353 Nov 26 10:57 output.list
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas       620 Nov 26 10:57 runtime_log
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas  17602560 Nov 26 10:57 result.tar.gz
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas      9344 Nov 26 10:57 runtime_log.err
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas       663 Nov 26 10:57 MpWNDmsFUh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmr6KKDmy3d7Jm.diag
[2025-11-26 10:57:18] -rw-r--r--. 1 boincer umatlas     21882 Nov 26 10:57 stderr.txt
[2025-11-26 10:57:18] HITS file was successfully produced:
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas 907112477 Nov 26 10:54 shared/HITS.pool.root.1
[2025-11-26 10:57:18]  *** Contents of shared directory: ***
[2025-11-26 10:57:18] total 1306320
[2025-11-26 10:57:18] -rw-r--r--. 2 boincer umatlas 412329127 Nov 25 02:10 ATLAS.root_0
[2025-11-26 10:57:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 02:10 start_atlas.sh
[2025-11-26 10:57:18] -rw-r--r--. 2 boincer umatlas    590110 Nov 25 02:10 input.tar.gz
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas 907112477 Nov 26 10:54 HITS.pool.root.1
[2025-11-26 10:57:18] -rw-------. 1 boincer umatlas  17602560 Nov 26 10:57 result.tar.gz
10:57:20 (1054112): run_atlas exited; CPU time 282227.696225
10:57:20 (1054112): called boinc_finish(0)

</stderr_txt>
]]>

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