Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:14:05 (771180): wrapper (7.7.26015): starting
23:14:05 (771180): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 23:14:05] Arguments: --nthreads 8
[2025-11-25 23:14:05] Threads: 8
[2025-11-25 23:14:05] Checking for CVMFS
[2025-11-25 23:14:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 23:14:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 23:14:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 23:14:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 23:14:07] 2.13.2.0 9388 33351 171948 153308 3 258 29988253 39288833 8148 16776704 0 24446056 99.623 24560171 40418 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 23:14:07] CVMFS is ok
[2025-11-25 23:14:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 23:14:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 23:14:07] Further information can be found at the LHC@home message board.
[2025-11-25 23:14:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 23:14:07] Checking for apptainer binary...
[2025-11-25 23:14:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 23:14:07] Running /usr/bin/apptainer --version
[2025-11-25 23:14:07] apptainer version 1.4.4-1.el9
[2025-11-25 23:14:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 23:14:08] c-210-25.aglt2.org
[2025-11-25 23:14:08] apptainer works
[2025-11-25 23:14:08] Set ATHENA_PROC_NUMBER=8
[2025-11-25 23:14:08] Set ATHENA_CORE_NUMBER=8
[2025-11-25 23:14:08] Starting ATLAS job with PandaID=6896044236
[2025-11-25 23:14:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:27:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:27:12] 2025-11-28 01:26:26,561 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1690499999995
[2025-11-27 20:27:12] 2025-11-28 01:26:26,574 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896044236/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:27:12] 2025-11-28 01:26:26,576 | INFO     | extracted standard info from prmon json
[2025-11-27 20:27:12] 2025-11-28 01:26:26,577 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:27:12] 2025-11-28 01:26:26,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:27:12] 2025-11-28 01:26:26,628 | INFO     | time since job start (162675s) is within the limit (172800.0s)
[2025-11-27 20:27:12] 2025-11-28 01:26:26,814 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:27:12] 2025-11-28 01:26:26,822 | INFO     | sum of square deviations: 5862356685087.414
[2025-11-27 20:27:12] 2025-11-28 01:26:27,190 | INFO     | sum of deviations: 17128338963982.64
[2025-11-27 20:27:12] 2025-11-28 01:26:27,191 | INFO     | mean x: 1764211922.468844
[2025-11-27 20:27:12] 2025-11-28 01:26:27,191 | INFO     | mean y: 2961118.9234234234
[2025-11-27 20:27:12] 2025-11-28 01:26:27,191 | INFO     | intersect: -5151624559.77027
[2025-11-27 20:27:12] 2025-11-28 01:26:27,199 | INFO     | chi2: 15.376983468078782
[2025-11-27 20:27:12] 2025-11-28 01:26:27,207 | INFO     | sum of square deviations: 5829411577208.263
[2025-11-27 20:27:12] 2025-11-28 01:26:27,745 | INFO     | sum of deviations: 18059830378891.184
[2025-11-27 20:27:12] 2025-11-28 01:26:27,745 | INFO     | mean x: 1764211769.9744265
[2025-11-27 20:27:12] 2025-11-28 01:26:27,745 | INFO     | mean y: 2965430.193681835
[2025-11-27 20:27:12] 2025-11-28 01:26:27,746 | INFO     | intersect: -5462657454.07007
[2025-11-27 20:27:12] 2025-11-28 01:26:27,749 | INFO     | chi2: 12.202455536914522
[2025-11-27 20:27:12] 2025-11-28 01:26:27,750 | INFO     | current chi2=12.202455536914522 (change=20.64467284987521 %)
[2025-11-27 20:27:12] 2025-11-28 01:26:27,750 | INFO     | right removable region: 2658
[2025-11-27 20:27:12] 2025-11-28 01:26:27,754 | INFO     | sum of square deviations: 5829406752718.257
[2025-11-27 20:27:12] 2025-11-28 01:26:27,992 | INFO     | monitor loop #10057: job 0:6896044236 is in state 'finished'
[2025-11-27 20:27:12] 2025-11-28 01:26:27,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:27:12] 2025-11-28 01:26:28,042 | INFO     | sum of deviations: 16018411757663.744
[2025-11-27 20:27:12] 2025-11-28 01:26:28,042 | INFO     | mean x: 1764212074.9744265
[2025-11-27 20:27:12] 2025-11-28 01:26:28,042 | INFO     | mean y: 2966255.7608123356
[2025-11-27 20:27:12] 2025-11-28 01:26:28,042 | INFO     | intersect: -4844847019.8534
[2025-11-27 20:27:12] 2025-11-28 01:26:28,051 | INFO     | chi2: 11.116078682842982
[2025-11-27 20:27:12] 2025-11-28 01:26:28,051 | INFO     | current chi2=11.116078682842982 (change=27.709627145538985 %)
[2025-11-27 20:27:12] 2025-11-28 01:26:28,064 | INFO     | sum of square deviations: 5796580497086.443
[2025-11-27 20:27:12] 2025-11-28 01:26:28,500 | INFO     | sum of deviations: 15073654911447.67
[2025-11-27 20:27:12] 2025-11-28 01:26:28,501 | INFO     | mean x: 1764212227.48003
[2025-11-27 20:27:12] 2025-11-28 01:26:28,501 | INFO     | mean y: 2970645.135267521
[2025-11-27 20:27:12] 2025-11-28 01:26:28,501 | INFO     | intersect: -4584755915.542531
[2025-11-27 20:27:12] 2025-11-28 01:26:28,509 | INFO     | chi2: 8.134161151284799
[2025-11-27 20:27:12] 2025-11-28 01:26:28,514 | INFO     | current chi2=8.134161151284799 (change=26.825264705625006 %)
[2025-11-27 20:27:12] 2025-11-28 01:26:28,527 | INFO     | sum of square deviations: 5763878009305.39
[2025-11-27 20:27:12] 2025-11-28 01:26:28,680 | INFO     | time since job start (162677s) is within the limit (172800.0s)
[2025-11-27 20:27:12] 2025-11-28 01:26:28,807 | INFO     | sum of deviations: 14316493971762.768
[2025-11-27 20:27:12] 2025-11-28 01:26:28,807 | INFO     | mean x: 1764212379.9849
[2025-11-27 20:27:12] 2025-11-28 01:26:28,807 | INFO     | mean y: 2974175.5673839184
[2025-11-27 20:27:12] 2025-11-28 01:26:28,807 | INFO     | intersect: -4379029722.188053
[2025-11-27 20:27:12] 2025-11-28 01:26:28,811 | INFO     | chi2: 6.293659501853032
[2025-11-27 20:27:12] 2025-11-28 01:26:28,812 | INFO     | current chi2=6.293659501853032 (change=22.626815662990126 %)
[2025-11-27 20:27:12] 2025-11-28 01:26:28,812 | INFO     | left removable region: 30
[2025-11-27 20:27:12] 2025-11-28 01:26:28,816 | INFO     | sum of square deviations: 5627881684846.869
[2025-11-27 20:27:12] 2025-11-28 01:26:29,637 | INFO     | sum of deviations: 14702755039239.09
[2025-11-27 20:27:12] 2025-11-28 01:26:29,642 | INFO     | mean x: 1764212654.4923897
[2025-11-27 20:27:12] 2025-11-28 01:26:29,642 | INFO     | mean y: 2983147.4790715375
[2025-11-27 20:27:12] 2025-11-28 01:26:29,642 | INFO     | intersect: -4605995496.469292
[2025-11-27 20:27:12] 2025-11-28 01:26:29,651 | INFO     | chi2: 1.6969082209331696
[2025-11-27 20:27:12] 2025-11-28 01:26:29,651 | INFO     | current memory leak: 2.61 B/s (using 2628 data points, chi2=1.70)
[2025-11-27 20:27:12] 2025-11-28 01:26:29,660 | INFO     | could have reported an average CPU frequency of 2600 MHz (92 samples)
[2025-11-27 20:27:12] 2025-11-28 01:26:29,665 | INFO     | ..............................
[2025-11-27 20:27:12] 2025-11-28 01:26:29,665 | INFO     | . Timing measurements:
[2025-11-27 20:27:12] 2025-11-28 01:26:29,665 | INFO     | . get job = 0 s
[2025-11-27 20:27:12] 2025-11-28 01:26:29,665 | INFO     | . initial setup = 5 s
[2025-11-27 20:27:12] 2025-11-28 01:26:29,665 | INFO     | . payload setup = 66 s
[2025-11-27 20:27:12] 2025-11-28 01:26:29,665 | INFO     | . stage-in = 0 s
[2025-11-27 20:27:12] 2025-11-28 01:26:29,666 | INFO     | . payload execution = 162487 s
[2025-11-27 20:27:12] 2025-11-28 01:26:29,666 | INFO     | . stage-out = 7 s
[2025-11-27 20:27:12] 2025-11-28 01:26:29,666 | INFO     | . log creation = 2 s
[2025-11-27 20:27:12] 2025-11-28 01:26:29,666 | INFO     | ..............................
[2025-11-27 20:27:12] 2025-11-28 01:26:30,144 | INFO     | 
[2025-11-27 20:27:12] 2025-11-28 01:26:30,145 | INFO     | job summary report
[2025-11-27 20:27:12] 2025-11-28 01:26:30,145 | INFO     | --------------------------------------------------
[2025-11-27 20:27:12] 2025-11-28 01:26:30,145 | INFO     | PanDA job id: 6896044236
[2025-11-27 20:27:12] 2025-11-28 01:26:30,145 | INFO     | task id: 47556173
[2025-11-27 20:27:12] 2025-11-28 01:26:30,145 | INFO     | errors: (none)
[2025-11-27 20:27:12] 2025-11-28 01:26:30,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:27:12] 2025-11-28 01:26:30,146 | INFO     | pilot state: finished 
[2025-11-27 20:27:12] 2025-11-28 01:26:30,146 | INFO     | transexitcode: 0
[2025-11-27 20:27:12] 2025-11-28 01:26:30,146 | INFO     | exeerrorcode: 0
[2025-11-27 20:27:12] 2025-11-28 01:26:30,146 | INFO     | exeerrordiag: 
[2025-11-27 20:27:12] 2025-11-28 01:26:30,146 | INFO     | exitcode: 0
[2025-11-27 20:27:12] 2025-11-28 01:26:30,146 | INFO     | exitmsg: OK
[2025-11-27 20:27:12] 2025-11-28 01:26:30,146 | INFO     | cpuconsumptiontime: 323735 s
[2025-11-27 20:27:12] 2025-11-28 01:26:30,146 | INFO     | nevents: 1000
[2025-11-27 20:27:12] 2025-11-28 01:26:30,146 | INFO     | neventsw: 0
[2025-11-27 20:27:12] 2025-11-28 01:26:30,147 | INFO     | pid: 783355
[2025-11-27 20:27:12] 2025-11-28 01:26:30,147 | INFO     | pgrp: 783355
[2025-11-27 20:27:12] 2025-11-28 01:26:30,147 | INFO     | corecount: 8
[2025-11-27 20:27:12] 2025-11-28 01:26:30,147 | INFO     | event service: False
[2025-11-27 20:27:12] 2025-11-28 01:26:30,147 | INFO     | sizes: {0: 2283432, 1: 2284117, 2: 2284316, 3: 2284316, 14: 2284344, 25: 2284372, 36: 2284372, 37: 2284790, 47: 2284818, 162558: 2384797, 162566: 2393791, 162569: 
[2025-11-27 20:27:12] 2025-11-28 01:26:30,147 | INFO     | --------------------------------------------------
[2025-11-27 20:27:12] 2025-11-28 01:26:30,147 | INFO     | 
[2025-11-27 20:27:12] 2025-11-28 01:26:30,148 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 20:27:12] 2025-11-28 01:26:30,305 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,305 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,305 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,305 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,306 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,306 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,306 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,306 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,306 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,306 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,306 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,307 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,307 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,307 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,307 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,307 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,307 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:27:12] 2025-11-28 01:26:30,373 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,373 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:27:12] 2025-11-28 01:26:30,374 | INFO     | job 6896044236 has completed (purged errors)
[2025-11-27 20:27:12] 2025-11-28 01:26:30,374 | INFO     | overall cleanup function is called
[2025-11-27 20:27:12] 2025-11-28 01:26:31,508 | INFO     | --- collectZombieJob: --- 10, [783355]
[2025-11-27 20:27:12] 2025-11-28 01:26:31,508 | INFO     | zombie collector waiting for pid 783355
[2025-11-27 20:27:12] 2025-11-28 01:26:31,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:27:12] 2025-11-28 01:26:31,508 | INFO     | collected zombie processes
[2025-11-27 20:27:12] 2025-11-28 01:26:31,508 | INFO     | will attempt to kill all subprocesses of pid=783355
[2025-11-27 20:27:12] 2025-11-28 01:26:32,378 | INFO     | process IDs to be killed: [783355] (in reverse order)
[2025-11-27 20:27:12] 2025-11-28 01:26:32,581 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:27:12] 2025-11-28 01:26:32,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:27:12] 2025-11-28 01:26:32,600 | INFO     | did not find any defunct processes belonging to 783355
[2025-11-27 20:27:12] 2025-11-28 01:26:32,622 | INFO     | did not find any defunct processes belonging to 783355
[2025-11-27 20:27:12] 2025-11-28 01:26:32,628 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:27:12] 2025-11-28 01:26:32,628 | INFO     | ready for new job
[2025-11-27 20:27:12] 2025-11-28 01:26:32,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:27:12] 2025-11-28 01:26:32,655 | INFO     | ***************************************
[2025-11-27 20:27:12] 2025-11-28 01:26:32,656 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:27:12] 2025-11-28 01:26:32,656 | INFO     | ***************************************
[2025-11-27 20:27:12] 2025-11-28 01:26:32,656 | INFO     | 
[2025-11-27 20:27:12] 2025-11-28 01:26:32,658 | INFO     | architecture information:
[2025-11-27 20:27:12] 2025-11-28 01:26:32,670 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:27:12] 2025-11-28 01:26:32,889 | INFO     | cat /etc/os-release:
[2025-11-27 20:27:12] NAME="CentOS Linux"
[2025-11-27 20:27:12] VERSION="7 (Core)"
[2025-11-27 20:27:12] ID="centos"
[2025-11-27 20:27:12] ID_LIKE="rhel fedora"
[2025-11-27 20:27:12] VERSION_ID="7"
[2025-11-27 20:27:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:27:12] ANSI_COLOR="0;31"
[2025-11-27 20:27:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:27:12] HOME_URL="https://www.centos.org/"
[2025-11-27 20:27:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:27:12] 
[2025-11-27 20:27:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:27:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:27:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:27:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:27:12] 
[2025-11-27 20:27:12] 2025-11-28 01:26:32,889 | INFO     | ***************************************
[2025-11-27 20:27:12] 2025-11-28 01:26:33,393 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 20:27:12] 2025-11-28 01:26:33,494 | INFO     | sufficient remaining disk space (51456770048 B)
[2025-11-27 20:27:12] 2025-11-28 01:26:33,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:27:12] 2025-11-28 01:26:33,495 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:27:12] 2025-11-28 01:26:33,495 | INFO     | update_server=False
[2025-11-27 20:27:12] 2025-11-28 01:26:33,495 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:27:12] 2025-11-28 01:26:33,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:27:12] 2025-11-28 01:26:33,548 | INFO     | all job control threads have been joined
[2025-11-27 20:27:12] 2025-11-28 01:26:33,732 | INFO     | all payload control threads have been joined
[2025-11-27 20:27:12] 2025-11-28 01:26:33,982 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:27:12] 2025-11-28 01:26:34,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:27:12] 2025-11-28 01:26:34,147 | INFO     | aborting loop
[2025-11-27 20:27:12] 2025-11-28 01:26:34,262 | INFO     | all data control threads have been joined
[2025-11-27 20:27:12] 2025-11-28 01:26:34,501 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:34,556 | INFO     | [job] control thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:34,740 | INFO     | [payload] control thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:34,873 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,014 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,153 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:27:12] 2025-11-28 01:26:35,227 | INFO     | [job] validate thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,268 | INFO     | [data] control thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,321 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,503 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,599 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,653 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,672 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:35,803 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:36,170 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:26:37,993 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:27:12] 2025-11-28 01:27:02,367 | INFO     | PID=775368 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 20:27:12] 2025-11-28 01:27:02,367 | INFO     | .. there are 7 such processes running
[2025-11-27 20:27:12] 2025-11-28 01:27:02,369 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:27:12] 2025-11-28 01:27:02,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:27:12] 2025-11-28 01:27:02,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:27:12] 2025-11-28 01:27:05,054 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:27:12] 2025-11-28 01:27:05,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794521085760)>', '<ExcThread(monitor, started 139793711220480)>']
[2025-11-27 20:27:12] 2025-11-28 01:27:06,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:27:12] 2025-11-28 01:27:06,393 | INFO     | [monitor] control thread has ended
[2025-11-27 20:27:12] 2025-11-28 01:27:10,597 | INFO     | all workflow threads have been joined
[2025-11-27 20:27:12] 2025-11-28 01:27:10,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:27:12] 2025-11-28 01:27:10,597 | INFO     | traces error code: 0
[2025-11-27 20:27:12] 2025-11-28 01:27:10,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:27:12] 2025-11-28 01:27:11,425 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:27:12] 2025-11-28 01:27:11,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:27:12] 2025-11-28 01:27:11,445 [wrapper] pilotpid: 775368
[2025-11-27 20:27:12] 2025-11-28 01:27:11,448 [wrapper] Pilot exit status: 0
[2025-11-27 20:27:12] 2025-11-28 01:27:11,470 [wrapper] pandaids: 6896044236
[2025-11-27 20:27:12] 2025-11-28 01:27:11,562 [wrapper] cleanup supervisor_pilot  413870 775369
[2025-11-27 20:27:12] 2025-11-28 01:27:11,570 [wrapper] Test setup, not cleaning
[2025-11-27 20:27:12] 2025-11-28 01:27:11,574 [wrapper] apfmon messages muted
[2025-11-27 20:27:12] 2025-11-28 01:27:11,577 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:27:12] 2025-11-28 01:27:11,581 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:27:12]  *** Error codes and diagnostics ***
[2025-11-27 20:27:12]     "exeErrorCode": 0,
[2025-11-27 20:27:12]     "exeErrorDiag": "",
[2025-11-27 20:27:12]     "pilotErrorCode": 0,
[2025-11-27 20:27:12]     "pilotErrorDiag": "",
[2025-11-27 20:27:12]  *** Listing of results directory ***
[2025-11-27 20:27:12] total 1350784
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:57 queuedata.json
[2025-11-27 20:27:12] -rwx------. 1 boincer umatlas     36292 Nov 24 13:01 runpilot2-wrapper.sh
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas       100 Nov 25 23:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:27:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 23:14 run_atlas
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas       105 Nov 25 23:14 job.xml
[2025-11-27 20:27:12] -rw-r--r--. 2 boincer umatlas 409913594 Nov 25 23:14 EVNT.47483658._003024.pool.root.1
[2025-11-27 20:27:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:14 start_atlas.sh
[2025-11-27 20:27:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 23:14 shared
[2025-11-27 20:27:12] -rw-r--r--. 2 boincer umatlas    590093 Nov 25 23:14 input.tar.gz
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas         0 Nov 25 23:14 boinc_lockfile
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 23:14 pandaJob.out
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas        57 Nov 25 23:14 setup.sh.local
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas    991877 Nov 25 23:15 agis_schedconf.cvmfs.json
[2025-11-27 20:27:12] drwx------. 5 boincer umatlas      4096 Nov 25 23:15 pilot3
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas       534 Nov 27 20:11 boinc_task_state.xml
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas      6662 Nov 27 20:19 init_data.xml
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas 920763766 Nov 27 20:24 HITS.47556173._000068.pool.root.1
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas      1066 Nov 27 20:25 memory_monitor_summary.json
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas   1516240 Nov 27 20:25 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas   3388078 Nov 27 20:25 log.47556173._000068.job.log.tgz.1
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas      8628 Nov 27 20:26 heartbeat.json
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas        95 Nov 27 20:27 pilot_heartbeat.json
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas      4822 Nov 27 20:27 pilotlog.txt
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas        30 Nov 27 20:27 wrapper_checkpoint.txt
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 20:27 boinc_mmap_file
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas  20912406 Nov 27 20:27 log.47556173._000068.job.log.1
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas       353 Nov 27 20:27 output.list
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas       620 Nov 27 20:27 runtime_log
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas  24320000 Nov 27 20:27 result.tar.gz
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas       665 Nov 27 20:27 Z3xNDm63ph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmppLKDmChmytm.diag
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas      9344 Nov 27 20:27 runtime_log.err
[2025-11-27 20:27:12] -rw-r--r--. 1 boincer umatlas     21391 Nov 27 20:27 stderr.txt
[2025-11-27 20:27:12] HITS file was successfully produced:
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas 920763766 Nov 27 20:24 shared/HITS.pool.root.1
[2025-11-27 20:27:12]  *** Contents of shared directory: ***
[2025-11-27 20:27:12] total 1323848
[2025-11-27 20:27:12] -rw-r--r--. 2 boincer umatlas 409913594 Nov 25 23:14 ATLAS.root_0
[2025-11-27 20:27:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 23:14 start_atlas.sh
[2025-11-27 20:27:12] -rw-r--r--. 2 boincer umatlas    590093 Nov 25 23:14 input.tar.gz
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas 920763766 Nov 27 20:24 HITS.pool.root.1
[2025-11-27 20:27:12] -rw-------. 1 boincer umatlas  24320000 Nov 27 20:27 result.tar.gz
20:27:13 (771180): run_atlas exited; CPU time 327114.319213
20:27:13 (771180): called boinc_finish(0)

</stderr_txt>
]]>

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