Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:35 (1103836): wrapper (7.7.26015): starting
00:01:35 (1103836): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:01:35] Arguments: --nthreads 9
[2025-11-26 00:01:35] Threads: 9
[2025-11-26 00:01:35] Checking for CVMFS
[2025-11-26 00:01:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:01:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:01:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:01:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:01:37] 2.13.2.0 7301 36109 240548 153309 0 263 26696656 40960000 27972 16776704 0 229680368 99.676 201037616 35317 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:01:37] CVMFS is ok
[2025-11-26 00:01:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:01:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:01:37] Further information can be found at the LHC@home message board.
[2025-11-26 00:01:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:01:37] Checking for apptainer binary...
[2025-11-26 00:01:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:01:37] Running /usr/bin/apptainer --version
[2025-11-26 00:01:37] apptainer version 1.4.4-1.el9
[2025-11-26 00:01:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:01:38] c-212-17.aglt2.org
[2025-11-26 00:01:38] apptainer works
[2025-11-26 00:01:38] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:01:38] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:01:38] Starting ATLAS job with PandaID=6896044247
[2025-11-26 00:01:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:57:24]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:57:25] 2025-11-27 08:56:48,851 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:57:25] 2025-11-27 08:56:48,896 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:57:25] 2025-11-27 08:56:48,897 | INFO     | sum of square deviations: 1382797580129.4949
[2025-11-27 03:57:25] 2025-11-27 08:56:48,931 | INFO     | time since job start (100482s) is within the limit (172800.0s)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,006 | INFO     | sum of deviations: 9307174036329.06
[2025-11-27 03:57:25] 2025-11-27 08:56:49,010 | INFO     | mean x: 1764183553.5018227
[2025-11-27 03:57:25] 2025-11-27 08:56:49,010 | INFO     | mean y: 2993839.6537059536
[2025-11-27 03:57:25] 2025-11-27 08:56:49,010 | INFO     | intersect: -11871168800.2124
[2025-11-27 03:57:25] 2025-11-27 08:56:49,012 | INFO     | chi2: 11.104068802441251
[2025-11-27 03:57:25] 2025-11-27 08:56:49,013 | INFO     | sum of square deviations: 1370234619601.9602
[2025-11-27 03:57:25] 2025-11-27 08:56:49,068 | INFO     | sum of deviations: 9916122185546.309
[2025-11-27 03:57:25] 2025-11-27 08:56:49,068 | INFO     | mean x: 1764183401.0048752
[2025-11-27 03:57:25] 2025-11-27 08:56:49,068 | INFO     | mean y: 3001232.2120658136
[2025-11-27 03:57:25] 2025-11-27 08:56:49,068 | INFO     | intersect: -12764051878.122263
[2025-11-27 03:57:25] 2025-11-27 08:56:49,070 | INFO     | chi2: 7.622713281975906
[2025-11-27 03:57:25] 2025-11-27 08:56:49,070 | INFO     | current chi2=7.622713281975906 (change=31.352070870634037 %)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,071 | INFO     | sum of square deviations: 1357747686152.9382
[2025-11-27 03:57:25] 2025-11-27 08:56:49,121 | INFO     | sum of deviations: 10028321741866.8
[2025-11-27 03:57:25] 2025-11-27 08:56:49,121 | INFO     | mean x: 1764183248.5061126
[2025-11-27 03:57:25] 2025-11-27 08:56:49,121 | INFO     | mean y: 3002599.369804401
[2025-11-27 03:57:25] 2025-11-27 08:56:49,121 | INFO     | intersect: -13027251407.366339
[2025-11-27 03:57:25] 2025-11-27 08:56:49,122 | INFO     | chi2: 7.176211501861865
[2025-11-27 03:57:25] 2025-11-27 08:56:49,123 | INFO     | current chi2=7.176211501861865 (change=5.857517705274381 %)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,123 | INFO     | right removable region: 1635
[2025-11-27 03:57:25] 2025-11-27 08:56:49,124 | INFO     | sum of square deviations: 1370233613711.961
[2025-11-27 03:57:25] 2025-11-27 08:56:49,174 | INFO     | sum of deviations: 8671007465091.276
[2025-11-27 03:57:25] 2025-11-27 08:56:49,174 | INFO     | mean x: 1764183706.0048752
[2025-11-27 03:57:25] 2025-11-27 08:56:49,174 | INFO     | mean y: 3001560.8415600243
[2025-11-27 03:57:25] 2025-11-27 08:56:49,174 | INFO     | intersect: -11160970722.045616
[2025-11-27 03:57:25] 2025-11-27 08:56:49,176 | INFO     | chi2: 7.594084418718971
[2025-11-27 03:57:25] 2025-11-27 08:56:49,176 | INFO     | current chi2=7.594084418718971 (change=31.60989405028365 %)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,177 | INFO     | sum of square deviations: 1357745974306.896
[2025-11-27 03:57:25] 2025-11-27 08:56:49,228 | INFO     | sum of deviations: 8140464208767.373
[2025-11-27 03:57:25] 2025-11-27 08:56:49,228 | INFO     | mean x: 1764183858.5079463
[2025-11-27 03:57:25] 2025-11-27 08:56:49,228 | INFO     | mean y: 3008038.58801956
[2025-11-27 03:57:25] 2025-11-27 08:56:49,228 | INFO     | intersect: -10574283906.762968
[2025-11-27 03:57:25] 2025-11-27 08:56:49,230 | INFO     | chi2: 5.292696420069154
[2025-11-27 03:57:25] 2025-11-27 08:56:49,230 | INFO     | current chi2=5.292696420069154 (change=30.305009422558314 %)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,231 | INFO     | sum of square deviations: 1345334927226.8958
[2025-11-27 03:57:25] 2025-11-27 08:56:49,281 | INFO     | sum of deviations: 7818098714082.314
[2025-11-27 03:57:25] 2025-11-27 08:56:49,281 | INFO     | mean x: 1764184011.0079706
[2025-11-27 03:57:25] 2025-11-27 08:56:49,281 | INFO     | mean y: 3011997.2838749234
[2025-11-27 03:57:25] 2025-11-27 08:56:49,282 | INFO     | intersect: -10249130029.75489
[2025-11-27 03:57:25] 2025-11-27 08:56:49,283 | INFO     | chi2: 4.476595589700758
[2025-11-27 03:57:25] 2025-11-27 08:56:49,283 | INFO     | current chi2=4.476595589700758 (change=15.419377300270941 %)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,283 | INFO     | left removable region: 30
[2025-11-27 03:57:25] 2025-11-27 08:56:49,284 | INFO     | sum of square deviations: 1282018803477.9414
[2025-11-27 03:57:25] 2025-11-27 08:56:49,333 | INFO     | sum of deviations: 8046141817538.025
[2025-11-27 03:57:25] 2025-11-27 08:56:49,333 | INFO     | mean x: 1764184132.9937694
[2025-11-27 03:57:25] 2025-11-27 08:56:49,333 | INFO     | mean y: 3026892.4018691587
[2025-11-27 03:57:25] 2025-11-27 08:56:49,333 | INFO     | intersect: -11069256671.4659
[2025-11-27 03:57:25] 2025-11-27 08:56:49,335 | INFO     | chi2: 0.2711914082886749
[2025-11-27 03:57:25] 2025-11-27 08:56:49,335 | INFO     | current memory leak: 6.28 B/s (using 1605 data points, chi2=0.27)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,336 | INFO     | could have reported an average CPU frequency of 3196 MHz (59 samples)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,336 | INFO     | ..............................
[2025-11-27 03:57:25] 2025-11-27 08:56:49,336 | INFO     | . Timing measurements:
[2025-11-27 03:57:25] 2025-11-27 08:56:49,336 | INFO     | . get job = 0 s
[2025-11-27 03:57:25] 2025-11-27 08:56:49,336 | INFO     | . initial setup = 4 s
[2025-11-27 03:57:25] 2025-11-27 08:56:49,337 | INFO     | . payload setup = 14 s
[2025-11-27 03:57:25] 2025-11-27 08:56:49,337 | INFO     | . stage-in = 0 s
[2025-11-27 03:57:25] 2025-11-27 08:56:49,337 | INFO     | . payload execution = 100413 s
[2025-11-27 03:57:25] 2025-11-27 08:56:49,337 | INFO     | . stage-out = 3 s
[2025-11-27 03:57:25] 2025-11-27 08:56:49,337 | INFO     | . log creation = 0 s
[2025-11-27 03:57:25] 2025-11-27 08:56:49,337 | INFO     | ..............................
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | 
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | job summary report
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | --------------------------------------------------
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | PanDA job id: 6896044247
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | task id: 47556173
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | errors: (none)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | pilot state: finished 
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | transexitcode: 0
[2025-11-27 03:57:25] 2025-11-27 08:56:49,417 | INFO     | exeerrorcode: 0
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | exeerrordiag: 
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | exitcode: 0
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | exitmsg: OK
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | cpuconsumptiontime: 199237 s
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | nevents: 1000
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | neventsw: 0
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | pid: 1131766
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | pgrp: 1131766
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | corecount: 9
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | event service: False
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | sizes: {0: 2284139, 1: 2284338, 9: 2284600, 12: 2284628, 100431: 2355818, 100437: 2364996, 100457: 2365186}
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | --------------------------------------------------
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | 
[2025-11-27 03:57:25] 2025-11-27 08:56:49,418 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 03:57:25] 2025-11-27 08:56:49,494 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,494 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,494 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,494 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,495 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,496 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:57:25] 2025-11-27 08:56:49,496 | INFO     | job 6896044247 has completed (purged errors)
[2025-11-27 03:57:25] 2025-11-27 08:56:49,496 | INFO     | overall cleanup function is called
[2025-11-27 03:57:25] 2025-11-27 08:56:50,514 | INFO     | --- collectZombieJob: --- 10, [1131766]
[2025-11-27 03:57:25] 2025-11-27 08:56:50,516 | INFO     | zombie collector waiting for pid 1131766
[2025-11-27 03:57:25] 2025-11-27 08:56:50,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:57:25] 2025-11-27 08:56:50,517 | INFO     | collected zombie processes
[2025-11-27 03:57:25] 2025-11-27 08:56:50,517 | INFO     | will attempt to kill all subprocesses of pid=1131766
[2025-11-27 03:57:25] 2025-11-27 08:56:51,372 | INFO     | process IDs to be killed: [1131766] (in reverse order)
[2025-11-27 03:57:25] 2025-11-27 08:56:51,772 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:57:25] 2025-11-27 08:56:51,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:57:25] 2025-11-27 08:56:51,796 | INFO     | did not find any defunct processes belonging to 1131766
[2025-11-27 03:57:25] 2025-11-27 08:56:51,817 | INFO     | did not find any defunct processes belonging to 1131766
[2025-11-27 03:57:25] 2025-11-27 08:56:51,818 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:57:25] 2025-11-27 08:56:51,819 | INFO     | ready for new job
[2025-11-27 03:57:25] 2025-11-27 08:56:51,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:57:25] 2025-11-27 08:56:51,828 | INFO     | ***************************************
[2025-11-27 03:57:25] 2025-11-27 08:56:51,828 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:57:25] 2025-11-27 08:56:51,828 | INFO     | ***************************************
[2025-11-27 03:57:25] 2025-11-27 08:56:51,828 | INFO     | 
[2025-11-27 03:57:25] 2025-11-27 08:56:51,834 | INFO     | architecture information:
[2025-11-27 03:57:25] 2025-11-27 08:56:51,835 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:57:25] 2025-11-27 08:56:51,874 | INFO     | cat /etc/os-release:
[2025-11-27 03:57:25] NAME="CentOS Linux"
[2025-11-27 03:57:25] VERSION="7 (Core)"
[2025-11-27 03:57:25] ID="centos"
[2025-11-27 03:57:25] ID_LIKE="rhel fedora"
[2025-11-27 03:57:25] VERSION_ID="7"
[2025-11-27 03:57:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:57:25] ANSI_COLOR="0;31"
[2025-11-27 03:57:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:57:25] HOME_URL="https://www.centos.org/"
[2025-11-27 03:57:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:57:25] 
[2025-11-27 03:57:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:57:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:57:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:57:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:57:25] 
[2025-11-27 03:57:25] 2025-11-27 08:56:51,875 | INFO     | ***************************************
[2025-11-27 03:57:25] 2025-11-27 08:56:52,378 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 03:57:25] 2025-11-27 08:56:52,428 | INFO     | sufficient remaining disk space (121072779264 B)
[2025-11-27 03:57:25] 2025-11-27 08:56:52,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:57:25] 2025-11-27 08:56:52,429 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:57:25] 2025-11-27 08:56:52,429 | INFO     | update_server=False
[2025-11-27 03:57:25] 2025-11-27 08:56:52,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:57:25] 2025-11-27 08:56:52,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:57:25] 2025-11-27 08:56:52,593 | INFO     | all payload control threads have been joined
[2025-11-27 03:57:25] 2025-11-27 08:56:52,593 | INFO     | all job control threads have been joined
[2025-11-27 03:57:25] 2025-11-27 08:56:52,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:57:25] 2025-11-27 08:56:52,991 | INFO     | all data control threads have been joined
[2025-11-27 03:57:25] 2025-11-27 08:56:53,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:57:25] 2025-11-27 08:56:53,291 | INFO     | aborting loop
[2025-11-27 03:57:25] 2025-11-27 08:56:53,437 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:53,599 | INFO     | [payload] control thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:53,600 | INFO     | [job] control thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:53,607 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:53,642 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:53,997 | INFO     | [data] control thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:54,199 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:54,205 | INFO     | [job] validate thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:54,209 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:54,296 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:54,342 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:54,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:57:25] 2025-11-27 08:56:54,436 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:54,439 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:54,468 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:55,441 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:56:56,969 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:57:25] 2025-11-27 08:57:00,022 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:57:25] 2025-11-27 08:57:00,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979119380288)>', '<ExcThread(monitor, started 139978487101184)>']
[2025-11-27 03:57:25] 2025-11-27 08:57:05,543 | INFO     | all workflow threads have been joined
[2025-11-27 03:57:25] 2025-11-27 08:57:05,543 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:57:25] 2025-11-27 08:57:05,543 | INFO     | traces error code: 0
[2025-11-27 03:57:25] 2025-11-27 08:57:05,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:57:25] 2025-11-27 08:57:22,776 | INFO     | PID=1111663 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:57:25] 2025-11-27 08:57:22,777 | INFO     | .. there are 39 such processes running
[2025-11-27 03:57:25] 2025-11-27 08:57:22,777 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:57:25] 2025-11-27 08:57:22,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:57:25] 2025-11-27 08:57:22,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:57:25] 2025-11-27 08:57:22,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:57:25] 2025-11-27 08:57:22,778 | INFO     | [monitor] control thread has ended
[2025-11-27 03:57:25] 2025-11-27 08:57:23,116 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:57:25] 2025-11-27 08:57:23,168 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:57:25] 2025-11-27 08:57:23,193 [wrapper] pilotpid: 1111663
[2025-11-27 03:57:25] 2025-11-27 08:57:23,224 [wrapper] Pilot exit status: 0
[2025-11-27 03:57:25] 2025-11-27 08:57:23,370 [wrapper] pandaids: 6896044247
[2025-11-27 03:57:25] 2025-11-27 08:57:23,831 [wrapper] cleanup supervisor_pilot 2742110 1111664
[2025-11-27 03:57:25] 2025-11-27 08:57:23,870 [wrapper] Test setup, not cleaning
[2025-11-27 03:57:25] 2025-11-27 08:57:23,887 [wrapper] apfmon messages muted
[2025-11-27 03:57:25] 2025-11-27 08:57:23,917 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:57:25] 2025-11-27 08:57:23,943 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:57:25]  *** Error codes and diagnostics ***
[2025-11-27 03:57:25]     "exeErrorCode": 0,
[2025-11-27 03:57:25]     "exeErrorDiag": "",
[2025-11-27 03:57:25]     "pilotErrorCode": 0,
[2025-11-27 03:57:25]     "pilotErrorDiag": "",
[2025-11-27 03:57:25]  *** Listing of results directory ***
[2025-11-27 03:57:25] total 1329204
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:57 queuedata.json
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 13:01 pilot3.tar.gz
[2025-11-27 03:57:25] -rwx------. 1 boincer umatlas     36292 Nov 24 13:02 runpilot2-wrapper.sh
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:57:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:01 run_atlas
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:01 job.xml
[2025-11-27 03:57:25] -rw-r--r--. 2 boincer umatlas 409292794 Nov 26 00:01 EVNT.47483658._003025.pool.root.1
[2025-11-27 03:57:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:01 start_atlas.sh
[2025-11-27 03:57:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:01 shared
[2025-11-27 03:57:25] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 00:01 input.tar.gz
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:01 boinc_lockfile
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 00:01 pandaJob.out
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas        57 Nov 26 00:01 setup.sh.local
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas    991877 Nov 26 00:02 agis_schedconf.cvmfs.json
[2025-11-27 03:57:25] drwx------. 5 boincer umatlas      4096 Nov 26 00:02 pilot3
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas       533 Nov 27 03:47 boinc_task_state.xml
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 03:54 init_data.xml
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas 915960868 Nov 27 03:55 HITS.47556173._000079.pool.root.1
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas      1074 Nov 27 03:56 memory_monitor_summary.json
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas   2770546 Nov 27 03:56 log.47556173._000079.job.log.tgz.1
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas      8639 Nov 27 03:56 heartbeat.json
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:57 boinc_mmap_file
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:57 wrapper_checkpoint.txt
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas       823 Nov 27 03:57 pilotlog.txt
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas        95 Nov 27 03:57 pilot_heartbeat.json
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas  13195480 Nov 27 03:57 log.47556173._000079.job.log.1
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas       353 Nov 27 03:57 output.list
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:57 runtime_log
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas  15984640 Nov 27 03:57 result.tar.gz
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas      9344 Nov 27 03:57 runtime_log.err
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas       668 Nov 27 03:57 PL0NDmD4ph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmupLKDmHcRIem.diag
[2025-11-27 03:57:25] -rw-r--r--. 1 boincer umatlas     21133 Nov 27 03:57 stderr.txt
[2025-11-27 03:57:25] HITS file was successfully produced:
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas 915960868 Nov 27 03:55 shared/HITS.pool.root.1
[2025-11-27 03:57:25]  *** Contents of shared directory: ***
[2025-11-27 03:57:25] total 1310412
[2025-11-27 03:57:25] -rw-r--r--. 2 boincer umatlas 409292794 Nov 26 00:01 ATLAS.root_0
[2025-11-27 03:57:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:01 start_atlas.sh
[2025-11-27 03:57:25] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 00:01 input.tar.gz
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas 915960868 Nov 27 03:55 HITS.pool.root.1
[2025-11-27 03:57:25] -rw-------. 1 boincer umatlas  15984640 Nov 27 03:57 result.tar.gz
03:57:26 (1103836): run_atlas exited; CPU time 201348.715339
03:57:26 (1103836): called boinc_finish(0)

</stderr_txt>
]]>

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