Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:22 (3339251): wrapper (7.7.26015): starting
00:05:22 (3339251): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 00:05:22] Arguments: --nthreads 12
[2025-11-25 00:05:22] Threads: 12
[2025-11-25 00:05:22] Checking for CVMFS
[2025-11-25 00:05:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:05:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:05:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:05:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:05:23] 2.13.2.0 6914 33957 295496 153270 2 447 26270280 40960000 27663 16776704 0 125633076 99.625 119875566 36580 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:05:23] CVMFS is ok
[2025-11-25 00:05:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:05:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:05:23] Further information can be found at the LHC@home message board.
[2025-11-25 00:05:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:05:23] Checking for apptainer binary...
[2025-11-25 00:05:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:05:23] Running /usr/bin/apptainer --version
[2025-11-25 00:05:23] apptainer version 1.4.4-1.el9
[2025-11-25 00:05:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:05:24] c-212-1.aglt2.org
[2025-11-25 00:05:24] apptainer works
[2025-11-25 00:05:24] Set ATHENA_PROC_NUMBER=12
[2025-11-25 00:05:24] Set ATHENA_CORE_NUMBER=12
[2025-11-25 00:05:24] Starting ATLAS job with PandaID=6895386876
[2025-11-25 00:05:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 18:32:04]  *** The last 200 lines of the pilot log: ***
[2025-11-25 18:32:04] 2025-11-25 23:31:10,494 | INFO     | sum of square deviations: 397014186774.61487
[2025-11-25 18:32:04] 2025-11-25 23:31:10,605 | INFO     | sum of deviations: 4279167257118.082
[2025-11-25 18:32:04] 2025-11-25 23:31:10,605 | INFO     | mean x: 1764080309.4714549
[2025-11-25 18:32:04] 2025-11-25 23:31:10,606 | INFO     | mean y: 3542066.599447514
[2025-11-25 18:32:04] 2025-11-25 23:31:10,606 | INFO     | intersect: -19010374691.751648
[2025-11-25 18:32:04] 2025-11-25 23:31:10,607 | INFO     | chi2: 12.783039987913703
[2025-11-25 18:32:04] 2025-11-25 23:31:10,608 | INFO     | sum of square deviations: 391556380272.92596
[2025-11-25 18:32:04] 2025-11-25 23:31:10,633 | INFO     | sum of deviations: 4752733189860.699
[2025-11-25 18:32:04] 2025-11-25 23:31:10,633 | INFO     | mean x: 1764080157.0083256
[2025-11-25 18:32:04] 2025-11-25 23:31:10,634 | INFO     | mean y: 3555291.3663274744
[2025-11-25 18:32:04] 2025-11-25 23:31:10,634 | INFO     | intersect: -21408948077.737537
[2025-11-25 18:32:04] 2025-11-25 23:31:10,635 | INFO     | chi2: 9.286050327407
[2025-11-25 18:32:04] 2025-11-25 23:31:10,635 | INFO     | current chi2=9.286050327407 (change=27.35647908332516 %)
[2025-11-25 18:32:04] 2025-11-25 23:31:10,636 | INFO     | sum of square deviations: 386147338472.37177
[2025-11-25 18:32:04] 2025-11-25 23:31:10,662 | INFO     | sum of deviations: 4835849602227.294
[2025-11-25 18:32:04] 2025-11-25 23:31:10,662 | INFO     | mean x: 1764080004.5241635
[2025-11-25 18:32:04] 2025-11-25 23:31:10,663 | INFO     | mean y: 3557628.334572491
[2025-11-25 18:32:04] 2025-11-25 23:31:10,663 | INFO     | intersect: -22088594092.622234
[2025-11-25 18:32:04] 2025-11-25 23:31:10,664 | INFO     | chi2: 8.953996409149317
[2025-11-25 18:32:04] 2025-11-25 23:31:10,664 | INFO     | current chi2=8.953996409149317 (change=3.5758358672432995 %)
[2025-11-25 18:32:04] 2025-11-25 23:31:10,664 | INFO     | right removable region: 1075
[2025-11-25 18:32:04] 2025-11-25 23:31:10,665 | INFO     | sum of square deviations: 391551099502.9258
[2025-11-25 18:32:04] 2025-11-25 23:31:10,674 | INFO     | monitor loop #3542: job 0:6895386876 is in state 'finished'
[2025-11-25 18:32:04] 2025-11-25 23:31:10,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 18:32:04] 2025-11-25 23:31:10,692 | INFO     | sum of deviations: 3758321013727.9297
[2025-11-25 18:32:04] 2025-11-25 23:31:10,692 | INFO     | mean x: 1764080462.0083256
[2025-11-25 18:32:04] 2025-11-25 23:31:10,692 | INFO     | mean y: 3556608.11933395
[2025-11-25 18:32:04] 2025-11-25 23:31:10,693 | INFO     | intersect: -16929049835.048689
[2025-11-25 18:32:04] 2025-11-25 23:31:10,694 | INFO     | chi2: 8.821384185911826
[2025-11-25 18:32:04] 2025-11-25 23:31:10,694 | INFO     | current chi2=8.821384185911826 (change=30.991499719531518 %)
[2025-11-25 18:32:04] 2025-11-25 23:31:10,695 | INFO     | sum of square deviations: 386138292240.76855
[2025-11-25 18:32:04] 2025-11-25 23:31:10,733 | INFO     | sum of deviations: 3268079255101.8906
[2025-11-25 18:32:04] 2025-11-25 23:31:10,733 | INFO     | mean x: 1764080614.5455391
[2025-11-25 18:32:04] 2025-11-25 23:31:10,734 | INFO     | mean y: 3570420.165427509
[2025-11-25 18:32:04] 2025-11-25 23:31:10,734 | INFO     | intersect: -14926715895.828655
[2025-11-25 18:32:04] 2025-11-25 23:31:10,735 | INFO     | chi2: 5.409453736580392
[2025-11-25 18:32:04] 2025-11-25 23:31:10,735 | INFO     | current chi2=5.409453736580392 (change=38.67794869177618 %)
[2025-11-25 18:32:04] 2025-11-25 23:31:10,737 | INFO     | sum of square deviations: 380776645707.1603
[2025-11-25 18:32:04] 2025-11-25 23:31:10,768 | INFO     | sum of deviations: 3068732715628.8975
[2025-11-25 18:32:04] 2025-11-25 23:31:10,768 | INFO     | mean x: 1764080767.067227
[2025-11-25 18:32:04] 2025-11-25 23:31:10,768 | INFO     | mean y: 3576086.0569561156
[2025-11-25 18:32:04] 2025-11-25 23:31:10,768 | INFO     | intersect: -14213399728.878437
[2025-11-25 18:32:04] 2025-11-25 23:31:10,769 | INFO     | chi2: 4.892241025486888
[2025-11-25 18:32:04] 2025-11-25 23:31:10,769 | INFO     | current chi2=4.892241025486888 (change=9.561274322321166 %)
[2025-11-25 18:32:04] 2025-11-25 23:31:10,769 | INFO     | left removable region: 30
[2025-11-25 18:32:04] 2025-11-25 23:31:10,770 | INFO     | sum of square deviations: 353706031100.3234
[2025-11-25 18:32:04] 2025-11-25 23:31:10,791 | INFO     | sum of deviations: 3255492272145.592
[2025-11-25 18:32:04] 2025-11-25 23:31:10,792 | INFO     | mean x: 1764080889.122488
[2025-11-25 18:32:04] 2025-11-25 23:31:10,792 | INFO     | mean y: 3602679.5110047846
[2025-11-25 18:32:04] 2025-11-25 23:31:10,792 | INFO     | intersect: -16232907860.36464
[2025-11-25 18:32:04] 2025-11-25 23:31:10,793 | INFO     | chi2: 0.7024826401225222
[2025-11-25 18:32:04] 2025-11-25 23:31:10,793 | INFO     | current memory leak: 9.20 B/s (using 1045 data points, chi2=0.70)
[2025-11-25 18:32:04] 2025-11-25 23:31:10,794 | INFO     | could have reported an average CPU frequency of 3037 MHz (40 samples)
[2025-11-25 18:32:04] 2025-11-25 23:31:10,794 | INFO     | ..............................
[2025-11-25 18:32:04] 2025-11-25 23:31:10,794 | INFO     | . Timing measurements:
[2025-11-25 18:32:04] 2025-11-25 23:31:10,794 | INFO     | . get job = 0 s
[2025-11-25 18:32:04] 2025-11-25 23:31:10,794 | INFO     | . initial setup = 3 s
[2025-11-25 18:32:04] 2025-11-25 23:31:10,794 | INFO     | . payload setup = 18 s
[2025-11-25 18:32:04] 2025-11-25 23:31:10,795 | INFO     | . stage-in = 0 s
[2025-11-25 18:32:04] 2025-11-25 23:31:10,795 | INFO     | . payload execution = 66253 s
[2025-11-25 18:32:04] 2025-11-25 23:31:10,795 | INFO     | . stage-out = 4 s
[2025-11-25 18:32:04] 2025-11-25 23:31:10,795 | INFO     | . log creation = 1 s
[2025-11-25 18:32:04] 2025-11-25 23:31:10,795 | INFO     | ..............................
[2025-11-25 18:32:04] 2025-11-25 23:31:11,019 | INFO     | time since job start (66317s) is within the limit (172800.0s)
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | 
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | job summary report
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | --------------------------------------------------
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | PanDA job id: 6895386876
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | task id: 47556161
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | errors: (none)
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | pilot state: finished 
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | transexitcode: 0
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | exeerrorcode: 0
[2025-11-25 18:32:04] 2025-11-25 23:31:11,282 | INFO     | exeerrordiag: 
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | exitcode: 0
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | exitmsg: OK
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | cpuconsumptiontime: 213715 s
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | nevents: 1000
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | neventsw: 0
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | pid: 3369629
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | pgrp: 3369629
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | corecount: 12
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | event service: False
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | sizes: {0: 2284135, 1: 2284334, 10: 2284596, 12: 2284624, 66276: 2339664, 66277: 2339663, 66282: 2348874, 66284: 2348930, 66294: 2349176}
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | --------------------------------------------------
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | 
[2025-11-25 18:32:04] 2025-11-25 23:31:11,283 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 18:32:04] 2025-11-25 23:31:11,309 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,310 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,310 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,310 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,310 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,311 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 18:32:04] 2025-11-25 23:31:11,312 | INFO     | job 6895386876 has completed (purged errors)
[2025-11-25 18:32:04] 2025-11-25 23:31:11,312 | INFO     | overall cleanup function is called
[2025-11-25 18:32:04] 2025-11-25 23:31:12,352 | INFO     | --- collectZombieJob: --- 10, [3369629]
[2025-11-25 18:32:04] 2025-11-25 23:31:12,353 | INFO     | zombie collector waiting for pid 3369629
[2025-11-25 18:32:04] 2025-11-25 23:31:12,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 18:32:04] 2025-11-25 23:31:12,353 | INFO     | collected zombie processes
[2025-11-25 18:32:04] 2025-11-25 23:31:12,353 | INFO     | will attempt to kill all subprocesses of pid=3369629
[2025-11-25 18:32:04] 2025-11-25 23:31:13,120 | INFO     | process IDs to be killed: [3369629] (in reverse order)
[2025-11-25 18:32:04] 2025-11-25 23:31:13,440 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 18:32:04] 2025-11-25 23:31:13,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 18:32:04] 2025-11-25 23:31:13,501 | INFO     | did not find any defunct processes belonging to 3369629
[2025-11-25 18:32:04] 2025-11-25 23:31:13,573 | INFO     | did not find any defunct processes belonging to 3369629
[2025-11-25 18:32:04] 2025-11-25 23:31:13,582 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 18:32:04] 2025-11-25 23:31:13,582 | INFO     | ready for new job
[2025-11-25 18:32:04] 2025-11-25 23:31:13,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 18:32:04] 2025-11-25 23:31:13,592 | INFO     | ***************************************
[2025-11-25 18:32:04] 2025-11-25 23:31:13,592 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 18:32:04] 2025-11-25 23:31:13,592 | INFO     | ***************************************
[2025-11-25 18:32:04] 2025-11-25 23:31:13,592 | INFO     | 
[2025-11-25 18:32:04] 2025-11-25 23:31:13,606 | INFO     | architecture information:
[2025-11-25 18:32:04] 2025-11-25 23:31:13,618 | INFO     | executing command: cat /etc/os-release
[2025-11-25 18:32:04] 2025-11-25 23:31:13,688 | INFO     | cat /etc/os-release:
[2025-11-25 18:32:04] NAME="CentOS Linux"
[2025-11-25 18:32:04] VERSION="7 (Core)"
[2025-11-25 18:32:04] ID="centos"
[2025-11-25 18:32:04] ID_LIKE="rhel fedora"
[2025-11-25 18:32:04] VERSION_ID="7"
[2025-11-25 18:32:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 18:32:04] ANSI_COLOR="0;31"
[2025-11-25 18:32:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 18:32:04] HOME_URL="https://www.centos.org/"
[2025-11-25 18:32:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 18:32:04] 
[2025-11-25 18:32:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 18:32:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 18:32:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 18:32:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 18:32:04] 
[2025-11-25 18:32:04] 2025-11-25 23:31:13,688 | INFO     | ***************************************
[2025-11-25 18:32:04] 2025-11-25 23:31:14,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 18:32:04] 2025-11-25 23:31:14,323 | INFO     | sufficient remaining disk space (123012644864 B)
[2025-11-25 18:32:04] 2025-11-25 23:31:14,323 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 18:32:04] 2025-11-25 23:31:14,323 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 18:32:04] 2025-11-25 23:31:14,323 | INFO     | update_server=False
[2025-11-25 18:32:04] 2025-11-25 23:31:14,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 18:32:04] 2025-11-25 23:31:14,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:32:04] 2025-11-25 23:31:14,325 | INFO     | aborting loop
[2025-11-25 18:32:04] 2025-11-25 23:31:14,611 | INFO     | all payload control threads have been joined
[2025-11-25 18:32:04] 2025-11-25 23:31:14,717 | INFO     | all data control threads have been joined
[2025-11-25 18:32:04] 2025-11-25 23:31:14,842 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 18:32:04] 2025-11-25 23:31:15,330 | INFO     | [job] retrieve thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:15,331 | INFO     | [job] job monitor thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:15,567 | INFO     | all job control threads have been joined
[2025-11-25 18:32:04] 2025-11-25 23:31:15,618 | INFO     | [payload] control thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:15,635 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:15,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 18:32:04] 2025-11-25 23:31:15,724 | INFO     | [data] control thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:15,922 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 18:32:04] 2025-11-25 23:31:16,124 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:16,124 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:16,303 | INFO     | [job] validate thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:16,323 | INFO     | [payload] validate_post thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:16,374 | INFO     | [data] copytool_in thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:16,574 | INFO     | [job] control thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:16,624 | INFO     | [payload] failed_post thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:16,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:16,858 | INFO     | [data] copytool_out thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:16,929 | INFO     | [job] queue monitor thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:19,722 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 18:32:04] 2025-11-25 23:31:44,902 | INFO     | PID=3345549 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 18:32:04] 2025-11-25 23:31:44,903 | INFO     | .. there are 31 such processes running
[2025-11-25 18:32:04] 2025-11-25 23:31:44,906 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 18:32:04] 2025-11-25 23:31:44,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 18:32:04] 2025-11-25 23:31:44,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 18:32:04] 2025-11-25 23:31:57,856 | INFO     | [monitor] cgroup control has ended
[2025-11-25 18:32:04] 2025-11-25 23:31:59,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595950454592)>', '<ExcThread(monitor, started 140594907162368)>']
[2025-11-25 18:32:04] 2025-11-25 23:32:00,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 18:32:04] 2025-11-25 23:32:00,023 | INFO     | [monitor] control thread has ended
[2025-11-25 18:32:04] 2025-11-25 23:32:04,281 | INFO     | all workflow threads have been joined
[2025-11-25 18:32:04] 2025-11-25 23:32:04,282 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 18:32:04] 2025-11-25 23:32:04,282 | INFO     | traces error code: 0
[2025-11-25 18:32:04] 2025-11-25 23:32:04,282 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 18:32:04] 2025-11-25 23:32:04,468 [wrapper] ==== pilot stdout END ====
[2025-11-25 18:32:04] 2025-11-25 23:32:04,478 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 18:32:04] 2025-11-25 23:32:04,489 [wrapper] pilotpid: 3345549
[2025-11-25 18:32:04] 2025-11-25 23:32:04,498 [wrapper] Pilot exit status: 0
[2025-11-25 18:32:04] 2025-11-25 23:32:04,613 [wrapper] pandaids: 6895386876
[2025-11-25 18:32:04] 2025-11-25 23:32:04,728 [wrapper] cleanup supervisor_pilot 3210703 3345550
[2025-11-25 18:32:04] 2025-11-25 23:32:04,736 [wrapper] Test setup, not cleaning
[2025-11-25 18:32:04] 2025-11-25 23:32:04,738 [wrapper] apfmon messages muted
[2025-11-25 18:32:04] 2025-11-25 23:32:04,741 [wrapper] ==== wrapper stdout END ====
[2025-11-25 18:32:04] 2025-11-25 23:32:04,743 [wrapper] ==== wrapper stderr END ====
[2025-11-25 18:32:04]  *** Error codes and diagnostics ***
[2025-11-25 18:32:04]     "exeErrorCode": 0,
[2025-11-25 18:32:04]     "exeErrorDiag": "",
[2025-11-25 18:32:04]     "pilotErrorCode": 0,
[2025-11-25 18:32:04]     "pilotErrorDiag": "",
[2025-11-25 18:32:04]  *** Listing of results directory ***
[2025-11-25 18:32:05] total 1319848
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 01:19 queuedata.json
[2025-11-25 18:32:05] -rwx------. 1 boincer umatlas     36292 Nov 24 01:20 runpilot2-wrapper.sh
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 01:20 pilot3.tar.gz
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 18:32:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:05 run_atlas
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:05 job.xml
[2025-11-25 18:32:05] -rw-r--r--. 2 boincer umatlas 410699709 Nov 25 00:05 EVNT.47483658._002024.pool.root.1
[2025-11-25 18:32:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:05 start_atlas.sh
[2025-11-25 18:32:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:05 shared
[2025-11-25 18:32:05] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:05 input.tar.gz
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:05 boinc_lockfile
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas      2784 Nov 25 00:05 pandaJob.out
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas        57 Nov 25 00:05 setup.sh.local
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas    991801 Nov 25 00:05 agis_schedconf.cvmfs.json
[2025-11-25 18:32:05] drwx------. 5 boincer umatlas      4096 Nov 25 00:05 pilot3
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas       533 Nov 25 18:21 boinc_task_state.xml
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas 916071551 Nov 25 18:29 HITS.47556161._000074.pool.root.1
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas      1073 Nov 25 18:30 memory_monitor_summary.json
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas   1516240 Nov 25 18:30 agis_ddmendpoints.agis.ALL.json
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas   2600211 Nov 25 18:30 log.47556161._000074.job.log.tgz.1
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas      8639 Nov 25 18:31 heartbeat.json
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas      6948 Nov 25 18:31 init_data.xml
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas        95 Nov 25 18:31 pilot_heartbeat.json
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 18:32 boinc_mmap_file
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas        29 Nov 25 18:32 wrapper_checkpoint.txt
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas      4825 Nov 25 18:32 pilotlog.txt
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas   7812642 Nov 25 18:32 log.47556161._000074.job.log.1
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas       353 Nov 25 18:32 output.list
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas       620 Nov 25 18:32 runtime_log
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas  10434560 Nov 25 18:32 result.tar.gz
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas       665 Nov 25 18:32 sWFKDmn6eh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYVLKDmOqwoUn.diag
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas      9340 Nov 25 18:32 runtime_log.err
[2025-11-25 18:32:05] -rw-r--r--. 1 boincer umatlas     21238 Nov 25 18:32 stderr.txt
[2025-11-25 18:32:05] HITS file was successfully produced:
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas 916071551 Nov 25 18:29 shared/HITS.pool.root.1
[2025-11-25 18:32:05]  *** Contents of shared directory: ***
[2025-11-25 18:32:05] total 1306476
[2025-11-25 18:32:05] -rw-r--r--. 2 boincer umatlas 410699709 Nov 25 00:05 ATLAS.root_0
[2025-11-25 18:32:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:05 start_atlas.sh
[2025-11-25 18:32:05] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:05 input.tar.gz
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas 916071551 Nov 25 18:29 HITS.pool.root.1
[2025-11-25 18:32:05] -rw-------. 1 boincer umatlas  10434560 Nov 25 18:32 result.tar.gz
18:32:06 (3339251): run_atlas exited; CPU time 214181.292957
18:32:06 (3339251): called boinc_finish(0)

</stderr_txt>
]]>

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