Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:26 (1423049): wrapper (7.7.26015): starting
00:05:26 (1423049): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:05:26] Arguments: --nthreads 9
[2025-11-25 00:05:26] Threads: 9
[2025-11-25 00:05:26] Checking for CVMFS
[2025-11-25 00:05:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:05:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:05:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:05:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:05:27] 2.13.2.0 7301 34673 247156 153270 1 718 36451081 40960001 33507 16776704 0 219028542 99.679 190422375 35367 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:05:27] CVMFS is ok
[2025-11-25 00:05:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:05:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:05:27] Further information can be found at the LHC@home message board.
[2025-11-25 00:05:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:05:27] Checking for apptainer binary...
[2025-11-25 00:05:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:05:27] Running /usr/bin/apptainer --version
[2025-11-25 00:05:27] apptainer version 1.4.4-1.el9
[2025-11-25 00:05:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:05:28] c-212-17.aglt2.org
[2025-11-25 00:05:28] apptainer works
[2025-11-25 00:05:28] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:05:28] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:05:28] Starting ATLAS job with PandaID=6896044175
[2025-11-25 00:05:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:05 (1423049): BOINC client no longer exists - exiting
00:20:05 (1423049): timer handler: client dead, exiting
00:21:04 (1544304): wrapper (7.7.26015): starting
00:21:04 (1544304): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:21:04] Arguments: --nthreads 9
[2025-11-25 00:21:04] Threads: 9
[2025-11-25 00:21:04] This job has been restarted, cleaning up previous attempt
[2025-11-25 00:21:04] Checking for CVMFS
[2025-11-25 00:21:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:21:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:21:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:21:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:21:05] 2.13.2.0 7301 34688 232288 153272 1 168 36519716 40960000 25881 16776704 0 219256921 99.679 190456788 35371 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:21:05] CVMFS is ok
[2025-11-25 00:21:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:21:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:21:05] Further information can be found at the LHC@home message board.
[2025-11-25 00:21:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:21:05] Checking for apptainer binary...
[2025-11-25 00:21:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:21:05] Running /usr/bin/apptainer --version
[2025-11-25 00:21:05] apptainer version 1.4.4-1.el9
[2025-11-25 00:21:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:21:05] c-212-17.aglt2.org
[2025-11-25 00:21:05] apptainer works
[2025-11-25 00:21:05] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:21:05] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:21:05] Starting ATLAS job with PandaID=6896044175
[2025-11-25 00:21:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:01:34]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:01:35] 2025-11-26 01:44:43,855 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3193.6676875
[2025-11-26 00:01:35] 2025-11-26 01:44:43,869 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6896044175/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 00:01:35] 2025-11-26 01:44:43,869 | INFO     | extracted standard info from prmon json
[2025-11-26 00:01:35] 2025-11-26 01:44:43,870 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 00:01:35] 2025-11-26 01:44:43,870 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 00:01:35] 2025-11-26 01:44:43,884 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:01:35] 2025-11-26 01:44:43,885 | INFO     | sum of square deviations: 539694394920.37537
[2025-11-26 00:01:35] 2025-11-26 01:44:43,914 | INFO     | sum of deviations: 3394931475783.8555
[2025-11-26 00:01:35] 2025-11-26 01:44:43,914 | INFO     | mean x: 1764084786.7240233
[2025-11-26 00:01:35] 2025-11-26 01:44:43,915 | INFO     | mean y: 2991638.9393183705
[2025-11-26 00:01:35] 2025-11-26 01:44:43,915 | INFO     | intersect: -11093931035.761473
[2025-11-26 00:01:35] 2025-11-26 01:44:43,916 | INFO     | chi2: 6.547473234417031
[2025-11-26 00:01:35] 2025-11-26 01:44:43,917 | INFO     | sum of square deviations: 532993471035.86945
[2025-11-26 00:01:35] 2025-11-26 01:44:43,946 | INFO     | sum of deviations: 3843577213271.882
[2025-11-26 00:01:35] 2025-11-26 01:44:43,946 | INFO     | mean x: 1764084634.2520869
[2025-11-26 00:01:35] 2025-11-26 01:44:43,947 | INFO     | mean y: 3001847.6460767947
[2025-11-26 00:01:35] 2025-11-26 01:44:43,947 | INFO     | intersect: -12718346294.417892
[2025-11-26 00:01:35] 2025-11-26 01:44:43,948 | INFO     | chi2: 2.998073317898504
[2025-11-26 00:01:35] 2025-11-26 01:44:43,948 | INFO     | current chi2=2.998073317898504 (change=54.21022414969148 %)
[2025-11-26 00:01:35] 2025-11-26 01:44:43,949 | INFO     | sum of square deviations: 526347977466.6908
[2025-11-26 00:01:35] 2025-11-26 01:44:44,008 | INFO     | sum of deviations: 3924749577598.051
[2025-11-26 00:01:35] 2025-11-26 01:44:44,060 | INFO     | mean x: 1764084481.7770326
[2025-11-26 00:01:35] 2025-11-26 01:44:44,060 | INFO     | mean y: 3003704.4249790446
[2025-11-26 00:01:35] 2025-11-26 01:44:44,061 | INFO     | intersect: -13151012499.883196
[2025-11-26 00:01:35] 2025-11-26 01:44:44,062 | INFO     | chi2: 2.5953504534394387
[2025-11-26 00:01:35] 2025-11-26 01:44:44,062 | INFO     | current chi2=2.5953504534394387 (change=13.432722343873618 %)
[2025-11-26 00:01:35] 2025-11-26 01:44:44,062 | INFO     | right removable region: 1192
[2025-11-26 00:01:35] 2025-11-26 01:44:44,063 | INFO     | sum of square deviations: 532988536745.86945
[2025-11-26 00:01:35] 2025-11-26 01:44:44,429 | INFO     | sum of deviations: 3073342142515.951
[2025-11-26 00:01:35] 2025-11-26 01:44:44,430 | INFO     | mean x: 1764084939.2520869
[2025-11-26 00:01:35] 2025-11-26 01:44:44,430 | INFO     | mean y: 2998944.6193656093
[2025-11-26 00:01:35] 2025-11-26 01:44:44,430 | INFO     | intersect: -10169145882.13923
[2025-11-26 00:01:35] 2025-11-26 01:44:44,481 | INFO     | chi2: 4.44894333867234
[2025-11-26 00:01:35] 2025-11-26 01:44:44,481 | INFO     | current chi2=4.44894333867234 (change=32.050988535755934 %)
[2025-11-26 00:01:35] 2025-11-26 01:44:44,482 | INFO     | sum of square deviations: 526340228645.94324
[2025-11-26 00:01:35] 2025-11-26 01:44:44,638 | INFO     | sum of deviations: 2954200955124.6797
[2025-11-26 00:01:35] 2025-11-26 01:44:44,658 | INFO     | mean x: 1764085091.75943
[2025-11-26 00:01:35] 2025-11-26 01:44:44,658 | INFO     | mean y: 3001677.4727577535
[2025-11-26 00:01:35] 2025-11-26 01:44:44,658 | INFO     | intersect: -9898316100.20094
[2025-11-26 00:01:35] 2025-11-26 01:44:44,660 | INFO     | chi2: 4.33248411219164
[2025-11-26 00:01:35] 2025-11-26 01:44:44,660 | INFO     | current chi2=4.33248411219164 (change=2.617682843213143 %)
[2025-11-26 00:01:35] 2025-11-26 01:44:44,660 | INFO     | left removable region: 20
[2025-11-26 00:01:35] 2025-11-26 01:44:44,661 | INFO     | sum of square deviations: 499025045468.34174
[2025-11-26 00:01:35] 2025-11-26 01:44:44,957 | INFO     | monitor loop #3382: job 0:6896044175 is in state 'finished'
[2025-11-26 00:01:35] 2025-11-26 01:44:44,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 00:01:35] 2025-11-26 01:44:44,960 | INFO     | sum of deviations: 3276597932829.7734
[2025-11-26 00:01:35] 2025-11-26 01:44:44,960 | INFO     | mean x: 1764085061.3549488
[2025-11-26 00:01:35] 2025-11-26 01:44:44,960 | INFO     | mean y: 3018478.7192832762
[2025-11-26 00:01:35] 2025-11-26 01:44:44,960 | INFO     | intersect: -11579962211.050938
[2025-11-26 00:01:35] 2025-11-26 01:44:44,993 | INFO     | chi2: 0.23312702481072717
[2025-11-26 00:01:35] 2025-11-26 01:44:44,994 | INFO     | current memory leak: 6.57 B/s (using 1172 data points, chi2=0.23)
[2025-11-26 00:01:35] 2025-11-26 01:44:44,995 | INFO     | could have reported an average CPU frequency of 3215 MHz (44 samples)
[2025-11-26 00:01:35] 2025-11-26 01:44:44,995 | INFO     | ..............................
[2025-11-26 00:01:35] 2025-11-26 01:44:44,995 | INFO     | . Timing measurements:
[2025-11-26 00:01:35] 2025-11-26 01:44:44,995 | INFO     | . get job = 0 s
[2025-11-26 00:01:35] 2025-11-26 01:44:44,995 | INFO     | . initial setup = 1 s
[2025-11-26 00:01:35] 2025-11-26 01:44:44,995 | INFO     | . payload setup = 10 s
[2025-11-26 00:01:35] 2025-11-26 01:44:44,995 | INFO     | . stage-in = 0 s
[2025-11-26 00:01:35] 2025-11-26 01:44:44,995 | INFO     | . payload execution = 73348 s
[2025-11-26 00:01:35] 2025-11-26 01:44:44,995 | INFO     | . stage-out = 8 s
[2025-11-26 00:01:35] 2025-11-26 01:44:44,996 | INFO     | . log creation = 0 s
[2025-11-26 00:01:35] 2025-11-26 01:44:44,996 | INFO     | ..............................
[2025-11-26 00:01:35] 2025-11-26 01:44:46,002 | INFO     | 
[2025-11-26 00:01:35] 2025-11-26 01:44:46,002 | INFO     | job summary report
[2025-11-26 00:01:35] 2025-11-26 01:44:46,002 | INFO     | --------------------------------------------------
[2025-11-26 00:01:35] 2025-11-26 01:44:46,002 | INFO     | PanDA job id: 6896044175
[2025-11-26 00:01:35] 2025-11-26 01:44:46,002 | INFO     | task id: 47556185
[2025-11-26 00:01:35] 2025-11-26 01:44:46,002 | INFO     | errors: (none)
[2025-11-26 00:01:35] 2025-11-26 01:44:46,002 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:01:35] 2025-11-26 01:44:46,002 | INFO     | pilot state: finished 
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | transexitcode: 0
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | exeerrorcode: 0
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | exeerrordiag: 
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | exitcode: 0
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | exitmsg: OK
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | cpuconsumptiontime: 201823 s
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | nevents: 1000
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | neventsw: 0
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | pid: 1660178
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | pgrp: 1660178
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | corecount: 9
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | event service: False
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | sizes: {0: 2284134, 1: 2284333, 7: 2284595, 11: 2284623, 73362: 2341502, 73364: 2341501, 73373: 2350740, 73387: 2350930}
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | --------------------------------------------------
[2025-11-26 00:01:35] 2025-11-26 01:44:46,003 | INFO     | 
[2025-11-26 00:01:35] 2025-11-26 01:44:46,004 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-26 00:01:35] 2025-11-26 01:44:46,063 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,097 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:01:35] 2025-11-26 01:44:46,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,097 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:01:35] 2025-11-26 01:44:46,097 | INFO     | job 6896044175 has completed (purged errors)
[2025-11-26 00:01:35] 2025-11-26 01:44:46,097 | INFO     | overall cleanup function is called
[2025-11-26 00:01:35] 2025-11-26 01:44:47,220 | INFO     | --- collectZombieJob: --- 10, [1660178]
[2025-11-26 00:01:35] 2025-11-26 01:44:47,220 | INFO     | zombie collector waiting for pid 1660178
[2025-11-26 00:01:35] 2025-11-26 01:44:47,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:01:35] 2025-11-26 01:44:47,220 | INFO     | collected zombie processes
[2025-11-26 00:01:35] 2025-11-26 01:44:47,220 | INFO     | will attempt to kill all subprocesses of pid=1660178
[2025-11-26 00:01:35] 2025-11-26 01:44:47,260 | INFO     | PID=1585510 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 00:01:35] 2025-11-26 01:44:47,261 | INFO     | .. there are 36 such processes running
[2025-11-26 00:01:35] 2025-11-26 01:44:48,396 | INFO     | process IDs to be killed: [1660178] (in reverse order)
[2025-11-26 00:01:35] 2025-11-26 01:44:48,577 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:01:35] 2025-11-26 01:44:48,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:01:35] 2025-11-26 01:44:48,610 | INFO     | did not find any defunct processes belonging to 1660178
[2025-11-26 00:01:35] 2025-11-26 01:44:48,629 | INFO     | did not find any defunct processes belonging to 1660178
[2025-11-26 00:01:35] 2025-11-26 01:44:48,630 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:01:35] 2025-11-26 01:44:48,631 | INFO     | ready for new job
[2025-11-26 00:01:35] 2025-11-26 01:44:48,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:01:35] 2025-11-26 01:44:48,635 | INFO     | ***************************************
[2025-11-26 00:01:35] 2025-11-26 01:44:48,635 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:01:35] 2025-11-26 01:44:48,635 | INFO     | ***************************************
[2025-11-26 00:01:35] 2025-11-26 01:44:48,635 | INFO     | 
[2025-11-26 00:01:35] 2025-11-26 01:44:48,640 | INFO     | architecture information:
[2025-11-26 00:01:35] 2025-11-26 01:44:48,640 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:01:35] 2025-11-26 01:44:48,656 | INFO     | cat /etc/os-release:
[2025-11-26 00:01:35] NAME="CentOS Linux"
[2025-11-26 00:01:35] VERSION="7 (Core)"
[2025-11-26 00:01:35] ID="centos"
[2025-11-26 00:01:35] ID_LIKE="rhel fedora"
[2025-11-26 00:01:35] VERSION_ID="7"
[2025-11-26 00:01:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:01:35] ANSI_COLOR="0;31"
[2025-11-26 00:01:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:01:35] HOME_URL="https://www.centos.org/"
[2025-11-26 00:01:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:01:35] 
[2025-11-26 00:01:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:01:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:01:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:01:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:01:35] 
[2025-11-26 00:01:35] 2025-11-26 01:44:48,656 | INFO     | ***************************************
[2025-11-26 00:01:35] 2025-11-26 01:44:49,160 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-26 00:01:35] 2025-11-26 01:44:49,185 | INFO     | sufficient remaining disk space (119291248640 B)
[2025-11-26 00:01:35] 2025-11-26 01:44:49,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:01:35] 2025-11-26 01:44:49,185 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:01:35] 2025-11-26 01:44:49,185 | INFO     | update_server=False
[2025-11-26 00:01:35] 2025-11-26 01:44:49,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:01:35] 2025-11-26 01:44:49,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:01:35] 2025-11-26 01:44:49,189 | INFO     | aborting loop
[2025-11-26 00:01:35] 2025-11-26 01:44:49,203 | INFO     | all payload control threads have been joined
[2025-11-26 00:01:35] 2025-11-26 01:44:49,787 | INFO     | all data control threads have been joined
[2025-11-26 00:01:35] 2025-11-26 01:44:49,819 | INFO     | all job control threads have been joined
[2025-11-26 00:01:35] 2025-11-26 01:44:50,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:01:35] 2025-11-26 01:44:50,191 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:50,200 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:50,209 | INFO     | [payload] control thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:50,768 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:50,769 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:50,769 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:50,769 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:50,791 | INFO     | [job] validate thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:50,808 | INFO     | [data] control thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:50,839 | INFO     | [job] control thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:51,022 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:01:35] 2025-11-26 01:44:51,023 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:51,188 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:51,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:52,020 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:52,043 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:44:52,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:01:35] 2025-11-26 01:44:56,142 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:01:35] 2025-11-26 01:45:20,637 | INFO     | PID=1585510 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 00:01:35] 2025-11-26 01:45:20,637 | INFO     | .. there are 36 such processes running
[2025-11-26 00:01:35] 2025-11-26 01:45:20,638 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:01:35] 2025-11-26 01:45:20,638 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:01:35] 2025-11-26 01:45:20,638 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:01:35] 2025-11-26 01:45:46,947 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:01:35] 2025-11-26 01:45:47,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664209418048)>', '<ExcThread(monitor, started 139663603918592)>']
[2025-11-26 00:01:35] 2025-11-26 01:45:47,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:01:35] 2025-11-26 01:45:47,838 | INFO     | [monitor] control thread has ended
[2025-11-26 00:01:35] 2025-11-26 01:45:52,333 | INFO     | all workflow threads have been joined
[2025-11-26 00:01:35] 2025-11-26 01:45:52,333 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:01:35] 2025-11-26 01:45:52,333 | INFO     | traces error code: 0
[2025-11-26 00:01:35] 2025-11-26 01:45:52,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:01:35] 2025-11-26 01:45:54,660 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:01:35] 2025-11-26 01:45:54,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:01:35] 2025-11-26 01:45:54,695 [wrapper] pilotpid: 1585510
[2025-11-26 00:01:35] 2025-11-26 01:45:54,705 [wrapper] Pilot exit status: 0
[2025-11-26 00:01:35] 2025-11-26 01:45:54,730 [wrapper] pandaids: 6896044175 6896044175
[2025-11-26 00:01:35] 2025-11-26 01:45:55,168 [wrapper] cleanup supervisor_pilot 3824468 1585513
[2025-11-26 00:01:35] 2025-11-26 01:45:55,173 [wrapper] Test setup, not cleaning
[2025-11-26 00:01:35] 2025-11-26 01:45:55,177 [wrapper] apfmon messages muted
[2025-11-26 00:01:35] 2025-11-26 01:45:55,180 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:01:35] 2025-11-26 01:45:55,183 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:01:35]  *** Error codes and diagnostics ***
[2025-11-26 00:01:35]     "exeErrorCode": 0,
[2025-11-26 00:01:35]     "exeErrorDiag": "",
[2025-11-26 00:01:35]     "pilotErrorCode": 0,
[2025-11-26 00:01:35]     "pilotErrorDiag": "",
[2025-11-26 00:01:35]  *** Listing of results directory ***
[2025-11-26 00:01:35] total 1731832
[2025-11-26 00:01:35] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-26 00:01:35] -rwx------. 1 boincer umatlas     36292 Nov 24 12:57 runpilot2-wrapper.sh
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:57 queuedata.json
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:01:35] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:05 run_atlas
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:05 job.xml
[2025-11-26 00:01:35] -rw-r--r--. 3 boincer umatlas 410937758 Nov 25 00:05 EVNT.47483658._004238.pool.root.1
[2025-11-26 00:01:35] -rw-r--r--. 3 boincer umatlas 410937758 Nov 25 00:05 ATLAS.root_0
[2025-11-26 00:01:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:05 start_atlas.sh
[2025-11-26 00:01:35] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:05 shared
[2025-11-26 00:01:35] -rw-r--r--. 2 boincer umatlas    590093 Nov 25 00:05 input.tar.gz
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:05 boinc_lockfile
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 00:21 pandaJob.out
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas        57 Nov 25 00:21 setup.sh.local
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas    991801 Nov 25 00:21 agis_schedconf.cvmfs.json
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas       530 Nov 25 20:35 boinc_task_state.xml
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas 927084582 Nov 25 20:43 HITS.47556185._000019.pool.root.1
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas      1069 Nov 25 20:44 memory_monitor_summary.json
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas   1516240 Nov 25 20:44 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas   2301128 Nov 25 20:44 log.47556185._000019.job.log.tgz.1
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas      8625 Nov 25 20:44 heartbeat.json
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas        96 Nov 25 20:45 pilot_heartbeat.json
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas      4825 Nov 25 20:45 pilotlog.txt
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas   7953780 Nov 25 20:45 log.47556185._000019.job.log.1
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas       353 Nov 25 20:45 output.list
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas       620 Nov 25 20:45 runtime_log
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas  10270720 Nov 25 20:45 result.tar.gz
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas      9428 Nov 25 20:45 runtime_log.err
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas       791 Nov 25 20:45 kf3KDm6zph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmepLKDmLWrkTn.diag
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas      6949 Nov 26 00:01 init_data.xml
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 00:01 boinc_mmap_file
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas        27 Nov 26 00:01 wrapper_checkpoint.txt
[2025-11-26 00:01:35] -rw-r--r--. 1 boincer umatlas     23728 Nov 26 00:01 stderr.txt
[2025-11-26 00:01:35] HITS file was successfully produced:
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas 927084582 Nov 25 20:43 shared/HITS.pool.root.1
[2025-11-26 00:01:35]  *** Contents of shared directory: ***
[2025-11-26 00:01:35] total 1317304
[2025-11-26 00:01:35] -rw-r--r--. 3 boincer umatlas 410937758 Nov 25 00:05 ATLAS.root_0
[2025-11-26 00:01:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:05 start_atlas.sh
[2025-11-26 00:01:35] -rw-r--r--. 2 boincer umatlas    590093 Nov 25 00:05 input.tar.gz
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas 927084582 Nov 25 20:43 HITS.pool.root.1
[2025-11-26 00:01:35] -rw-------. 1 boincer umatlas  10270720 Nov 25 20:45 result.tar.gz
00:01:37 (1544304): run_atlas exited; CPU time 202507.326211
00:01:37 (1544304): called boinc_finish(0)

</stderr_txt>
]]>

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