Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:49 (2631693): wrapper (7.7.26015): starting
00:13:49 (2631693): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:13:49] Arguments: --nthreads 8
[2025-11-25 00:13:49] Threads: 8
[2025-11-25 00:13:49] Checking for CVMFS
[2025-11-25 00:13:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:13:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:13:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:13:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:13:50] 2.13.3.0 9828 28131 319292 153271 1 79 27953372 32935936 21699 16776704 0 145595929 99.779 86390230 33706 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:13:50] CVMFS is ok
[2025-11-25 00:13:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:13:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:13:50] Further information can be found at the LHC@home message board.
[2025-11-25 00:13:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:13:50] Checking for apptainer binary...
[2025-11-25 00:13:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:13:50] Running /usr/bin/apptainer --version
[2025-11-25 00:13:50] apptainer version 1.4.4-1.el9
[2025-11-25 00:13:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:13:51] c-4-39.aglt2.org
[2025-11-25 00:13:51] apptainer works
[2025-11-25 00:13:51] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:13:51] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:13:51] Starting ATLAS job with PandaID=6896044173
[2025-11-25 00:13:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:15:03]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:15:03] 2025-11-26 03:14:29,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:15:03] 2025-11-26 03:14:29,424 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:15:03] 2025-11-26 03:14:29,426 | INFO     | sum of square deviations: 676552377834.0549
[2025-11-25 22:15:03] 2025-11-26 03:14:29,454 | INFO     | sum of deviations: 4367788454189.251
[2025-11-25 22:15:03] 2025-11-26 03:14:29,454 | INFO     | mean x: 1764087288.9730146
[2025-11-25 22:15:03] 2025-11-26 03:14:29,454 | INFO     | mean y: 2950270.892829607
[2025-11-25 22:15:03] 2025-11-26 03:14:29,454 | INFO     | intersect: -11385909402.656755
[2025-11-25 22:15:03] 2025-11-26 03:14:29,455 | INFO     | chi2: 9.609405067275738
[2025-11-25 22:15:03] 2025-11-26 03:14:29,456 | INFO     | sum of square deviations: 668758514274.304
[2025-11-25 22:15:03] 2025-11-26 03:14:29,489 | INFO     | sum of deviations: 4850373056473.669
[2025-11-25 22:15:03] 2025-11-26 03:14:29,489 | INFO     | mean x: 1764087136.4767802
[2025-11-25 22:15:03] 2025-11-26 03:14:29,490 | INFO     | mean y: 2959713.9891640865
[2025-11-25 22:15:03] 2025-11-26 03:14:29,490 | INFO     | intersect: -12791614909.593363
[2025-11-25 22:15:03] 2025-11-26 03:14:29,491 | INFO     | chi2: 5.998630371753852
[2025-11-25 22:15:03] 2025-11-26 03:14:29,492 | INFO     | current chi2=5.998630371753852 (change=37.575423975186204 %)
[2025-11-25 22:15:03] 2025-11-26 03:14:29,493 | INFO     | sum of square deviations: 661024744864.5137
[2025-11-25 22:15:03] 2025-11-26 03:14:29,536 | INFO     | sum of deviations: 4930780126302.44
[2025-11-25 22:15:03] 2025-11-26 03:14:29,536 | INFO     | mean x: 1764086983.980575
[2025-11-25 22:15:03] 2025-11-26 03:14:29,536 | INFO     | mean y: 2961296.3776223776
[2025-11-25 22:15:03] 2025-11-26 03:14:29,537 | INFO     | intersect: -13155888064.795801
[2025-11-25 22:15:03] 2025-11-26 03:14:29,538 | INFO     | chi2: 5.710878578894983
[2025-11-25 22:15:03] 2025-11-26 03:14:29,538 | INFO     | current chi2=5.710878578894983 (change=4.796958222560691 %)
[2025-11-25 22:15:03] 2025-11-26 03:14:29,538 | INFO     | right removable region: 1286
[2025-11-25 22:15:03] 2025-11-26 03:14:29,540 | INFO     | sum of square deviations: 668757744454.304
[2025-11-25 22:15:03] 2025-11-26 03:14:29,583 | INFO     | sum of deviations: 3873552163148.0625
[2025-11-25 22:15:03] 2025-11-26 03:14:29,584 | INFO     | mean x: 1764087441.4767802
[2025-11-25 22:15:03] 2025-11-26 03:14:29,584 | INFO     | mean y: 2959939.16873065
[2025-11-25 22:15:03] 2025-11-26 03:14:29,584 | INFO     | intersect: -10214917583.11786
[2025-11-25 22:15:03] 2025-11-26 03:14:29,586 | INFO     | chi2: 6.058135906882583
[2025-11-25 22:15:03] 2025-11-26 03:14:29,586 | INFO     | current chi2=6.058135906882583 (change=36.95618131955736 %)
[2025-11-25 22:15:03] 2025-11-26 03:14:29,588 | INFO     | sum of square deviations: 661023205224.5145
[2025-11-25 22:15:03] 2025-11-26 03:14:29,630 | INFO     | sum of deviations: 3509658255383.9146
[2025-11-25 22:15:03] 2025-11-26 03:14:29,630 | INFO     | mean x: 1764087593.980575
[2025-11-25 22:15:03] 2025-11-26 03:14:29,631 | INFO     | mean y: 2967111.6363636362
[2025-11-25 22:15:03] 2025-11-26 03:14:29,631 | INFO     | intersect: -9363337336.528055
[2025-11-25 22:15:03] 2025-11-26 03:14:29,632 | INFO     | chi2: 4.2564618143182535
[2025-11-25 22:15:03] 2025-11-26 03:14:29,633 | INFO     | current chi2=4.2564618143182535 (change=29.739743714192134 %)
[2025-11-25 22:15:03] 2025-11-26 03:14:29,634 | INFO     | sum of square deviations: 653348998015.9739
[2025-11-25 22:15:03] 2025-11-26 03:14:29,679 | INFO     | sum of deviations: 3405832975743.5684
[2025-11-25 22:15:03] 2025-11-26 03:14:29,680 | INFO     | mean x: 1764087746.4797192
[2025-11-25 22:15:03] 2025-11-26 03:14:29,680 | INFO     | mean y: 2969174.464118565
[2025-11-25 22:15:03] 2025-11-26 03:14:29,680 | INFO     | intersect: -9193016795.225685
[2025-11-25 22:15:03] 2025-11-26 03:14:29,682 | INFO     | chi2: 4.194718730838318
[2025-11-25 22:15:03] 2025-11-26 03:14:29,682 | INFO     | current chi2=4.194718730838318 (change=1.4505729446987878 %)
[2025-11-25 22:15:03] 2025-11-26 03:14:29,682 | INFO     | left removable region: 30
[2025-11-25 22:15:03] 2025-11-26 03:14:29,683 | INFO     | sum of square deviations: 614399194215.8652
[2025-11-25 22:15:03] 2025-11-26 03:14:29,735 | INFO     | sum of deviations: 3772334137026.4673
[2025-11-25 22:15:03] 2025-11-26 03:14:29,736 | INFO     | mean x: 1764087868.4896498
[2025-11-25 22:15:03] 2025-11-26 03:14:29,736 | INFO     | mean y: 2984255.6512738853
[2025-11-25 22:15:03] 2025-11-26 03:14:29,736 | INFO     | intersect: -10828294414.092012
[2025-11-25 22:15:03] 2025-11-26 03:14:29,738 | INFO     | chi2: 0.223679736546756
[2025-11-25 22:15:03] 2025-11-26 03:14:29,738 | INFO     | current memory leak: 6.14 B/s (using 1256 data points, chi2=0.22)
[2025-11-25 22:15:03] 2025-11-26 03:14:29,739 | INFO     | could have reported an average CPU frequency of 2600 MHz (47 samples)
[2025-11-25 22:15:03] 2025-11-26 03:14:29,739 | INFO     | ..............................
[2025-11-25 22:15:03] 2025-11-26 03:14:29,740 | INFO     | . Timing measurements:
[2025-11-25 22:15:03] 2025-11-26 03:14:29,740 | INFO     | . get job = 0 s
[2025-11-25 22:15:03] 2025-11-26 03:14:29,740 | INFO     | . initial setup = 3 s
[2025-11-25 22:15:03] 2025-11-26 03:14:29,740 | INFO     | . payload setup = 23 s
[2025-11-25 22:15:03] 2025-11-26 03:14:29,740 | INFO     | . stage-in = 0 s
[2025-11-25 22:15:03] 2025-11-26 03:14:29,740 | INFO     | . payload execution = 79113 s
[2025-11-25 22:15:03] 2025-11-26 03:14:29,740 | INFO     | . stage-out = 3 s
[2025-11-25 22:15:03] 2025-11-26 03:14:29,740 | INFO     | . log creation = 0 s
[2025-11-25 22:15:03] 2025-11-26 03:14:29,740 | INFO     | ..............................
[2025-11-25 22:15:03] 2025-11-26 03:14:30,218 | INFO     | 
[2025-11-25 22:15:03] 2025-11-26 03:14:30,219 | INFO     | job summary report
[2025-11-25 22:15:03] 2025-11-26 03:14:30,219 | INFO     | --------------------------------------------------
[2025-11-25 22:15:03] 2025-11-26 03:14:30,219 | INFO     | PanDA job id: 6896044173
[2025-11-25 22:15:03] 2025-11-26 03:14:30,219 | INFO     | task id: 47556185
[2025-11-25 22:15:03] 2025-11-26 03:14:30,219 | INFO     | errors: (none)
[2025-11-25 22:15:03] 2025-11-26 03:14:30,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:15:03] 2025-11-26 03:14:30,220 | INFO     | pilot state: finished 
[2025-11-25 22:15:03] 2025-11-26 03:14:30,220 | INFO     | transexitcode: 0
[2025-11-25 22:15:03] 2025-11-26 03:14:30,220 | INFO     | exeerrorcode: 0
[2025-11-25 22:15:03] 2025-11-26 03:14:30,220 | INFO     | exeerrordiag: 
[2025-11-25 22:15:03] 2025-11-26 03:14:30,220 | INFO     | exitcode: 0
[2025-11-25 22:15:03] 2025-11-26 03:14:30,220 | INFO     | exitmsg: OK
[2025-11-25 22:15:03] 2025-11-26 03:14:30,220 | INFO     | cpuconsumptiontime: 304904 s
[2025-11-25 22:15:03] 2025-11-26 03:14:30,220 | INFO     | nevents: 1000
[2025-11-25 22:15:03] 2025-11-26 03:14:30,221 | INFO     | neventsw: 0
[2025-11-25 22:15:03] 2025-11-26 03:14:30,221 | INFO     | pid: 2644261
[2025-11-25 22:15:03] 2025-11-26 03:14:30,221 | INFO     | pgrp: 2644261
[2025-11-25 22:15:03] 2025-11-26 03:14:30,221 | INFO     | corecount: 8
[2025-11-25 22:15:03] 2025-11-26 03:14:30,221 | INFO     | event service: False
[2025-11-25 22:15:03] 2025-11-26 03:14:30,221 | INFO     | sizes: {0: 2284134, 1: 2284333, 12: 2284333, 21: 2284623, 23: 2284651, 79141: 2348197, 79145: 2357196, 79147: 2357252, 79156: 2357498}
[2025-11-25 22:15:03] 2025-11-26 03:14:30,221 | INFO     | --------------------------------------------------
[2025-11-25 22:15:03] 2025-11-26 03:14:30,221 | INFO     | 
[2025-11-25 22:15:03] 2025-11-26 03:14:30,222 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 22:15:03] 2025-11-26 03:14:30,261 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,261 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,261 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,261 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,263 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,263 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:15:03] 2025-11-26 03:14:30,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,264 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:15:03] 2025-11-26 03:14:30,264 | INFO     | job 6896044173 has completed (purged errors)
[2025-11-25 22:15:03] 2025-11-26 03:14:30,264 | INFO     | overall cleanup function is called
[2025-11-25 22:15:03] 2025-11-26 03:14:31,282 | INFO     | --- collectZombieJob: --- 10, [2644261]
[2025-11-25 22:15:03] 2025-11-26 03:14:31,283 | INFO     | zombie collector waiting for pid 2644261
[2025-11-25 22:15:03] 2025-11-26 03:14:31,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:15:03] 2025-11-26 03:14:31,283 | INFO     | collected zombie processes
[2025-11-25 22:15:03] 2025-11-26 03:14:31,283 | INFO     | will attempt to kill all subprocesses of pid=2644261
[2025-11-25 22:15:03] 2025-11-26 03:14:31,771 | INFO     | process IDs to be killed: [2644261] (in reverse order)
[2025-11-25 22:15:03] 2025-11-26 03:14:31,912 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:15:03] 2025-11-26 03:14:31,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:15:03] 2025-11-26 03:14:31,933 | INFO     | did not find any defunct processes belonging to 2644261
[2025-11-25 22:15:03] 2025-11-26 03:14:31,953 | INFO     | did not find any defunct processes belonging to 2644261
[2025-11-25 22:15:03] 2025-11-26 03:14:31,954 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:15:03] 2025-11-26 03:14:31,954 | INFO     | ready for new job
[2025-11-25 22:15:03] 2025-11-26 03:14:31,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:15:03] 2025-11-26 03:14:31,961 | INFO     | ***************************************
[2025-11-25 22:15:03] 2025-11-26 03:14:31,962 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:15:03] 2025-11-26 03:14:31,962 | INFO     | ***************************************
[2025-11-25 22:15:03] 2025-11-26 03:14:31,962 | INFO     | 
[2025-11-25 22:15:03] 2025-11-26 03:14:31,964 | INFO     | architecture information:
[2025-11-25 22:15:03] 2025-11-26 03:14:31,964 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:15:03] 2025-11-26 03:14:31,978 | INFO     | cat /etc/os-release:
[2025-11-25 22:15:03] NAME="CentOS Linux"
[2025-11-25 22:15:03] VERSION="7 (Core)"
[2025-11-25 22:15:03] ID="centos"
[2025-11-25 22:15:03] ID_LIKE="rhel fedora"
[2025-11-25 22:15:03] VERSION_ID="7"
[2025-11-25 22:15:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:15:03] ANSI_COLOR="0;31"
[2025-11-25 22:15:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:15:03] HOME_URL="https://www.centos.org/"
[2025-11-25 22:15:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:15:03] 
[2025-11-25 22:15:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:15:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:15:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:15:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:15:03] 
[2025-11-25 22:15:03] 2025-11-26 03:14:31,979 | INFO     | ***************************************
[2025-11-25 22:15:03] 2025-11-26 03:14:32,483 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 22:15:03] 2025-11-26 03:14:32,503 | INFO     | sufficient remaining disk space (72299315200 B)
[2025-11-25 22:15:03] 2025-11-26 03:14:32,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:15:03] 2025-11-26 03:14:32,503 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:15:03] 2025-11-26 03:14:32,504 | INFO     | update_server=False
[2025-11-25 22:15:03] 2025-11-26 03:14:32,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:15:03] 2025-11-26 03:14:32,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:15:03] 2025-11-26 03:14:32,505 | INFO     | aborting loop
[2025-11-25 22:15:03] 2025-11-26 03:14:32,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:15:03] 2025-11-26 03:14:32,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:15:03] 2025-11-26 03:14:32,696 | INFO     | all data control threads have been joined
[2025-11-25 22:15:03] 2025-11-26 03:14:32,900 | INFO     | all job control threads have been joined
[2025-11-25 22:15:03] 2025-11-26 03:14:32,970 | INFO     | all payload control threads have been joined
[2025-11-25 22:15:03] 2025-11-26 03:14:33,509 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:33,510 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:33,714 | INFO     | [data] control thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:33,906 | INFO     | [job] control thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:33,982 | INFO     | [payload] control thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:33,984 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:34,247 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:34,251 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:34,378 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:34,511 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:34,548 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:34,552 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:34,642 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:34,662 | INFO     | [job] validate thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:34,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:15:03] 2025-11-26 03:14:35,878 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:36,515 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:15:03] 2025-11-26 03:14:38,518 [wrapper] supervise_pilot (15 min periods counter: 89)
[2025-11-25 22:15:03] 2025-11-26 03:14:50,555 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:15:03] 2025-11-26 03:14:52,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139881258657600)>', '<ExcThread(monitor, started 139880751417088)>']
[2025-11-25 22:15:03] 2025-11-26 03:14:57,459 | INFO     | all workflow threads have been joined
[2025-11-25 22:15:03] 2025-11-26 03:14:57,460 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:15:03] 2025-11-26 03:14:57,461 | INFO     | traces error code: 0
[2025-11-25 22:15:03] 2025-11-26 03:14:57,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:15:03] 2025-11-26 03:15:02,912 | INFO     | PID=2636817 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 22:15:03] 2025-11-26 03:15:02,913 | INFO     | .. there are 38 such processes running
[2025-11-25 22:15:03] 2025-11-26 03:15:02,913 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:15:03] 2025-11-26 03:15:02,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:15:03] 2025-11-26 03:15:02,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:15:03] 2025-11-26 03:15:02,914 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:15:03] 2025-11-26 03:15:02,914 | INFO     | [monitor] control thread has ended
[2025-11-25 22:15:03] 2025-11-26 03:15:03,156 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:15:03] 2025-11-26 03:15:03,170 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:15:03] 2025-11-26 03:15:03,212 [wrapper] pilotpid: 2636817
[2025-11-25 22:15:03] 2025-11-26 03:15:03,233 [wrapper] Pilot exit status: 0
[2025-11-25 22:15:03] 2025-11-26 03:15:03,248 [wrapper] pandaids: 6896044173
[2025-11-25 22:15:03] 2025-11-26 03:15:03,335 [wrapper] cleanup supervisor_pilot 2966355 2636818
[2025-11-25 22:15:03] 2025-11-26 03:15:03,348 [wrapper] Test setup, not cleaning
[2025-11-25 22:15:03] 2025-11-26 03:15:03,363 [wrapper] apfmon messages muted
[2025-11-25 22:15:03] 2025-11-26 03:15:03,383 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:15:03] 2025-11-26 03:15:03,395 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:15:03]  *** Error codes and diagnostics ***
[2025-11-25 22:15:03]     "exeErrorCode": 0,
[2025-11-25 22:15:03]     "exeErrorDiag": "",
[2025-11-25 22:15:03]     "pilotErrorCode": 0,
[2025-11-25 22:15:03]     "pilotErrorDiag": "",
[2025-11-25 22:15:03]  *** Listing of results directory ***
[2025-11-25 22:15:03] total 1337552
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 12:01 pilot3.tar.gz
[2025-11-25 22:15:03] -rwx------. 1 boincer umatlas     36292 Nov 24 12:57 runpilot2-wrapper.sh
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 12:57 queuedata.json
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:15:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:13 run_atlas
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:13 job.xml
[2025-11-25 22:15:03] -rw-r--r--. 2 boincer umatlas 410937758 Nov 25 00:13 EVNT.47483658._004238.pool.root.1
[2025-11-25 22:15:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:13 start_atlas.sh
[2025-11-25 22:15:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:13 shared
[2025-11-25 22:15:03] -rw-r--r--. 2 boincer umatlas    590095 Nov 25 00:13 input.tar.gz
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:13 boinc_lockfile
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas      2783 Nov 25 00:13 pandaJob.out
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas        57 Nov 25 00:13 setup.sh.local
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas    991801 Nov 25 00:14 agis_schedconf.cvmfs.json
[2025-11-25 22:15:03] drwx------. 5 boincer umatlas      4096 Nov 25 00:14 pilot3
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas       533 Nov 25 22:05 boinc_task_state.xml
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas      6659 Nov 25 22:09 init_data.xml
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas 929015908 Nov 25 22:13 HITS.47556185._000017.pool.root.1
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas      1062 Nov 25 22:14 memory_monitor_summary.json
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas   1516240 Nov 25 22:14 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas   2391259 Nov 25 22:14 log.47556185._000017.job.log.tgz.1
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas        95 Nov 25 22:14 pilot_heartbeat.json
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas      8615 Nov 25 22:14 heartbeat.json
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 22:14 boinc_mmap_file
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas        29 Nov 25 22:14 wrapper_checkpoint.txt
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas       823 Nov 25 22:15 pilotlog.txt
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas  10501272 Nov 25 22:15 log.47556185._000017.job.log.1
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas       353 Nov 25 22:15 output.list
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas       620 Nov 25 22:15 runtime_log
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas  12912640 Nov 25 22:15 result.tar.gz
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas       659 Nov 25 22:15 13zKDm6zph8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcpLKDmDltgGo.diag
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 22:15 runtime_log.err
[2025-11-25 22:15:03] -rw-r--r--. 1 boincer umatlas     21130 Nov 25 22:15 stderr.txt
[2025-11-25 22:15:03] HITS file was successfully produced:
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas 929015908 Nov 25 22:13 shared/HITS.pool.root.1
[2025-11-25 22:15:03]  *** Contents of shared directory: ***
[2025-11-25 22:15:03] total 1321764
[2025-11-25 22:15:03] -rw-r--r--. 2 boincer umatlas 410937758 Nov 25 00:13 ATLAS.root_0
[2025-11-25 22:15:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:13 start_atlas.sh
[2025-11-25 22:15:03] -rw-r--r--. 2 boincer umatlas    590095 Nov 25 00:13 input.tar.gz
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas 929015908 Nov 25 22:13 HITS.pool.root.1
[2025-11-25 22:15:03] -rw-------. 1 boincer umatlas  12912640 Nov 25 22:15 result.tar.gz
22:15:05 (2631693): run_atlas exited; CPU time 307901.088024
22:15:05 (2631693): called boinc_finish(0)

</stderr_txt>
]]>

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