Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:13:36 (4054392): wrapper (7.7.26015): starting
20:13:36 (4054392): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 20:13:36] Arguments: --nthreads 9
[2025-11-25 20:13:36] Threads: 9
[2025-11-25 20:13:36] Checking for CVMFS
[2025-11-25 20:13:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 20:13:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 20:13:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 20:13:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 20:13:37] 2.13.3.0 11360 29240 375620 153303 2 394 27944984 32935937 31814 16776704 0 155125490 99.540 181749586 37530 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 20:13:37] CVMFS is ok
[2025-11-25 20:13:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:13:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:13:37] Further information can be found at the LHC@home message board.
[2025-11-25 20:13:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:13:37] Checking for apptainer binary...
[2025-11-25 20:13:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 20:13:37] Running /usr/bin/apptainer --version
[2025-11-25 20:13:37] apptainer version 1.4.4-1.el9
[2025-11-25 20:13:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:13:38] c6-8-25-3.aglt2.org
[2025-11-25 20:13:38] apptainer works
[2025-11-25 20:13:38] Set ATHENA_PROC_NUMBER=9
[2025-11-25 20:13:38] Set ATHENA_CORE_NUMBER=9
[2025-11-25 20:13:38] Starting ATLAS job with PandaID=6895350485
[2025-11-25 20:13:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:54:08]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:54:08] 2025-11-26 19:53:26,142 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 14:54:08] 2025-11-26 19:53:26,162 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2703.2475520833327
[2025-11-26 14:54:08] 2025-11-26 19:53:26,224 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895350485/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 14:54:08] 2025-11-26 19:53:26,225 | INFO     | extracted standard info from prmon json
[2025-11-26 14:54:08] 2025-11-26 19:53:26,225 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 14:54:08] 2025-11-26 19:53:26,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:54:08] 2025-11-26 19:53:26,256 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:54:08] 2025-11-26 19:53:26,258 | INFO     | sum of square deviations: 412693209487.1493
[2025-11-26 14:54:08] 2025-11-26 19:53:26,269 | INFO     | monitor loop #3728: job 0:6895350485 is in state 'finished'
[2025-11-26 14:54:08] 2025-11-26 19:53:26,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 14:54:08] 2025-11-26 19:53:26,279 | INFO     | sum of deviations: 2065661986416.375
[2025-11-26 14:54:08] 2025-11-26 19:53:26,280 | INFO     | mean x: 1764153205.1309092
[2025-11-26 14:54:08] 2025-11-26 19:53:26,280 | INFO     | mean y: 3119426.6154545452
[2025-11-26 14:54:08] 2025-11-26 19:53:26,280 | INFO     | intersect: -8827033651.459368
[2025-11-26 14:54:08] 2025-11-26 19:53:26,281 | INFO     | chi2: 10.97455508131528
[2025-11-26 14:54:08] 2025-11-26 19:53:26,282 | INFO     | sum of square deviations: 407093301529.6648
[2025-11-26 14:54:08] 2025-11-26 19:53:26,302 | INFO     | sum of deviations: 2446989388383.9717
[2025-11-26 14:54:08] 2025-11-26 19:53:26,302 | INFO     | mean x: 1764153052.6657534
[2025-11-26 14:54:08] 2025-11-26 19:53:26,303 | INFO     | mean y: 3129809.6365296803
[2025-11-26 14:54:08] 2025-11-26 19:53:26,303 | INFO     | intersect: -10600984242.68894
[2025-11-26 14:54:08] 2025-11-26 19:53:26,304 | INFO     | chi2: 8.036127805153034
[2025-11-26 14:54:08] 2025-11-26 19:53:26,304 | INFO     | current chi2=8.036127805153034 (change=26.774910275543313 %)
[2025-11-26 14:54:08] 2025-11-26 19:53:26,305 | INFO     | sum of square deviations: 401544191193.7988
[2025-11-26 14:54:08] 2025-11-26 19:53:26,334 | INFO     | sum of deviations: 2895689327936.3804
[2025-11-26 14:54:08] 2025-11-26 19:53:26,334 | INFO     | mean x: 1764152900.1990826
[2025-11-26 14:54:08] 2025-11-26 19:53:26,334 | INFO     | mean y: 3142137.9798165136
[2025-11-26 14:54:08] 2025-11-26 19:53:26,334 | INFO     | intersect: -12718841738.233181
[2025-11-26 14:54:08] 2025-11-26 19:53:26,336 | INFO     | chi2: 4.166067044394528
[2025-11-26 14:54:08] 2025-11-26 19:53:26,336 | INFO     | current chi2=4.166067044394528 (change=48.15827789942432 %)
[2025-11-26 14:54:08] 2025-11-26 19:53:26,341 | INFO     | sum of square deviations: 396045514902.3362
[2025-11-26 14:54:08] 2025-11-26 19:53:26,452 | INFO     | sum of deviations: 3097512282007.4727
[2025-11-26 14:54:08] 2025-11-26 19:53:26,462 | INFO     | mean x: 1764152747.7290323
[2025-11-26 14:54:08] 2025-11-26 19:53:26,462 | INFO     | mean y: 3147732.273732719
[2025-11-26 14:54:08] 2025-11-26 19:53:26,462 | INFO     | intersect: -13794470465.158539
[2025-11-26 14:54:08] 2025-11-26 19:53:26,463 | INFO     | chi2: 3.211363282542939
[2025-11-26 14:54:08] 2025-11-26 19:53:26,464 | INFO     | current chi2=3.211363282542939 (change=22.91618813807017 %)
[2025-11-26 14:54:08] 2025-11-26 19:53:26,464 | INFO     | right removable region: 1084
[2025-11-26 14:54:08] 2025-11-26 19:53:26,465 | INFO     | sum of square deviations: 407088248059.9961
[2025-11-26 14:54:08] 2025-11-26 19:53:26,509 | INFO     | sum of deviations: 1711434877907.9897
[2025-11-26 14:54:08] 2025-11-26 19:53:26,509 | INFO     | mean x: 1764153357.6648402
[2025-11-26 14:54:08] 2025-11-26 19:53:26,509 | INFO     | mean y: 3129056.994520548
[2025-11-26 14:54:08] 2025-11-26 19:53:26,509 | INFO     | intersect: -7413527161.096859
[2025-11-26 14:54:08] 2025-11-26 19:53:26,510 | INFO     | chi2: 8.46378660301696
[2025-11-26 14:54:08] 2025-11-26 19:53:26,511 | INFO     | current chi2=8.46378660301696 (change=22.878088994906292 %)
[2025-11-26 14:54:08] 2025-11-26 19:53:26,511 | INFO     | left removable region: 10
[2025-11-26 14:54:08] 2025-11-26 19:53:26,516 | INFO     | sum of square deviations: 384116578447.4594
[2025-11-26 14:54:08] 2025-11-26 19:53:26,557 | INFO     | sum of deviations: 2670388534897.3237
[2025-11-26 14:54:08] 2025-11-26 19:53:26,558 | INFO     | mean x: 1764153022.2998137
[2025-11-26 14:54:08] 2025-11-26 19:53:26,558 | INFO     | mean y: 3161174.101489758
[2025-11-26 14:54:08] 2025-11-26 19:53:26,558 | INFO     | intersect: -12261276938.918581
[2025-11-26 14:54:08] 2025-11-26 19:53:26,559 | INFO     | chi2: 0.47627378645472895
[2025-11-26 14:54:08] 2025-11-26 19:53:26,559 | INFO     | current memory leak: 6.95 B/s (using 1074 data points, chi2=0.48)
[2025-11-26 14:54:08] 2025-11-26 19:53:26,560 | INFO     | could have reported an average CPU frequency of 2700 MHz (40 samples)
[2025-11-26 14:54:08] 2025-11-26 19:53:26,560 | INFO     | ..............................
[2025-11-26 14:54:08] 2025-11-26 19:53:26,561 | INFO     | . Timing measurements:
[2025-11-26 14:54:08] 2025-11-26 19:53:26,561 | INFO     | . get job = 0 s
[2025-11-26 14:54:08] 2025-11-26 19:53:26,561 | INFO     | . initial setup = 2 s
[2025-11-26 14:54:08] 2025-11-26 19:53:26,565 | INFO     | . payload setup = 12 s
[2025-11-26 14:54:08] 2025-11-26 19:53:26,565 | INFO     | . stage-in = 0 s
[2025-11-26 14:54:08] 2025-11-26 19:53:26,565 | INFO     | . payload execution = 67099 s
[2025-11-26 14:54:08] 2025-11-26 19:53:26,565 | INFO     | . stage-out = 6 s
[2025-11-26 14:54:08] 2025-11-26 19:53:26,565 | INFO     | . log creation = 1 s
[2025-11-26 14:54:08] 2025-11-26 19:53:26,565 | INFO     | ..............................
[2025-11-26 14:54:08] 2025-11-26 19:53:26,956 | INFO     | time since job start (67169s) is within the limit (172800.0s)
[2025-11-26 14:54:08] 2025-11-26 19:53:27,002 | INFO     | 
[2025-11-26 14:54:08] 2025-11-26 19:53:27,002 | INFO     | job summary report
[2025-11-26 14:54:08] 2025-11-26 19:53:27,002 | INFO     | --------------------------------------------------
[2025-11-26 14:54:08] 2025-11-26 19:53:27,002 | INFO     | PanDA job id: 6895350485
[2025-11-26 14:54:08] 2025-11-26 19:53:27,002 | INFO     | task id: 47556137
[2025-11-26 14:54:08] 2025-11-26 19:53:27,002 | INFO     | errors: (none)
[2025-11-26 14:54:08] 2025-11-26 19:53:27,002 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:54:08] 2025-11-26 19:53:27,002 | INFO     | pilot state: finished 
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | transexitcode: 0
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | exeerrorcode: 0
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | exeerrordiag: 
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | exitcode: 0
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | exitmsg: OK
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | cpuconsumptiontime: 249717 s
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | nevents: 1000
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | neventsw: 0
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | pid: 4064676
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | pgrp: 4064676
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | corecount: 9
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | event service: False
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | sizes: {0: 2284086, 1: 2284285, 10: 2284547, 12: 2284575, 67116: 2339652, 67117: 2339651, 67124: 2348885, 67151: 2349075}
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | --------------------------------------------------
[2025-11-26 14:54:08] 2025-11-26 19:53:27,003 | INFO     | 
[2025-11-26 14:54:08] 2025-11-26 19:53:27,004 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 14:54:08] 2025-11-26 19:53:27,240 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,240 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,240 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,242 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:54:08] 2025-11-26 19:53:27,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,242 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:54:08] 2025-11-26 19:53:27,242 | INFO     | job 6895350485 has completed (purged errors)
[2025-11-26 14:54:08] 2025-11-26 19:53:27,242 | INFO     | overall cleanup function is called
[2025-11-26 14:54:08] 2025-11-26 19:53:28,270 | INFO     | --- collectZombieJob: --- 10, [4064676]
[2025-11-26 14:54:08] 2025-11-26 19:53:28,270 | INFO     | zombie collector waiting for pid 4064676
[2025-11-26 14:54:08] 2025-11-26 19:53:28,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:54:08] 2025-11-26 19:53:28,270 | INFO     | collected zombie processes
[2025-11-26 14:54:08] 2025-11-26 19:53:28,270 | INFO     | will attempt to kill all subprocesses of pid=4064676
[2025-11-26 14:54:08] 2025-11-26 19:53:29,403 | INFO     | process IDs to be killed: [4064676] (in reverse order)
[2025-11-26 14:54:08] 2025-11-26 19:53:29,612 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:54:08] 2025-11-26 19:53:29,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:54:08] 2025-11-26 19:53:29,684 | INFO     | did not find any defunct processes belonging to 4064676
[2025-11-26 14:54:08] 2025-11-26 19:53:29,772 | INFO     | did not find any defunct processes belonging to 4064676
[2025-11-26 14:54:08] 2025-11-26 19:53:29,788 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:54:08] 2025-11-26 19:53:29,792 | INFO     | ready for new job
[2025-11-26 14:54:08] 2025-11-26 19:53:29,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:54:08] 2025-11-26 19:53:29,804 | INFO     | ***************************************
[2025-11-26 14:54:08] 2025-11-26 19:53:29,805 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:54:08] 2025-11-26 19:53:29,805 | INFO     | ***************************************
[2025-11-26 14:54:08] 2025-11-26 19:53:29,805 | INFO     | 
[2025-11-26 14:54:08] 2025-11-26 19:53:29,832 | INFO     | architecture information:
[2025-11-26 14:54:08] 2025-11-26 19:53:29,839 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:54:08] 2025-11-26 19:53:29,894 | INFO     | cat /etc/os-release:
[2025-11-26 14:54:08] NAME="CentOS Linux"
[2025-11-26 14:54:08] VERSION="7 (Core)"
[2025-11-26 14:54:08] ID="centos"
[2025-11-26 14:54:08] ID_LIKE="rhel fedora"
[2025-11-26 14:54:08] VERSION_ID="7"
[2025-11-26 14:54:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:54:08] ANSI_COLOR="0;31"
[2025-11-26 14:54:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:54:08] HOME_URL="https://www.centos.org/"
[2025-11-26 14:54:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:54:08] 
[2025-11-26 14:54:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:54:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:54:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:54:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:54:08] 
[2025-11-26 14:54:08] 2025-11-26 19:53:29,895 | INFO     | ***************************************
[2025-11-26 14:54:08] 2025-11-26 19:53:30,397 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 14:54:08] 2025-11-26 19:53:30,438 | INFO     | sufficient remaining disk space (63831015424 B)
[2025-11-26 14:54:08] 2025-11-26 19:53:30,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:54:08] 2025-11-26 19:53:30,438 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:54:08] 2025-11-26 19:53:30,439 | INFO     | update_server=False
[2025-11-26 14:54:08] 2025-11-26 19:53:30,439 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:54:08] 2025-11-26 19:53:30,440 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:54:08] 2025-11-26 19:53:30,440 | INFO     | aborting loop
[2025-11-26 14:54:08] 2025-11-26 19:53:30,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:54:08] 2025-11-26 19:53:30,646 | INFO     | all job control threads have been joined
[2025-11-26 14:54:08] 2025-11-26 19:53:30,698 | INFO     | all payload control threads have been joined
[2025-11-26 14:54:08] 2025-11-26 19:53:31,445 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:31,445 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:31,500 | INFO     | all data control threads have been joined
[2025-11-26 14:54:08] 2025-11-26 19:53:31,652 | INFO     | [job] control thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:31,655 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:31,716 | INFO     | [payload] control thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:31,993 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:54:08] 2025-11-26 19:53:32,210 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:32,243 | INFO     | [job] validate thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:32,326 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:32,352 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:32,449 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:32,470 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:32,506 | INFO     | [data] control thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:32,730 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:32,837 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:33,000 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:53:33,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:54:08] 2025-11-26 19:53:37,351 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:54:08] 2025-11-26 19:54:00,910 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:54:08] 2025-11-26 19:54:01,281 | INFO     | PID=4058106 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 14:54:08] 2025-11-26 19:54:01,281 | INFO     | .. there are 48 such processes running
[2025-11-26 14:54:08] 2025-11-26 19:54:01,282 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:54:08] 2025-11-26 19:54:01,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:54:08] 2025-11-26 19:54:01,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:54:08] 2025-11-26 19:54:02,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562639599424)>', '<ExcThread(monitor, started 140561797347072)>']
[2025-11-26 14:54:08] 2025-11-26 19:54:03,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:54:08] 2025-11-26 19:54:03,318 | INFO     | [monitor] control thread has ended
[2025-11-26 14:54:08] 2025-11-26 19:54:07,758 | INFO     | all workflow threads have been joined
[2025-11-26 14:54:08] 2025-11-26 19:54:07,758 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:54:08] 2025-11-26 19:54:07,758 | INFO     | traces error code: 0
[2025-11-26 14:54:08] 2025-11-26 19:54:07,759 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:54:08] 2025-11-26 19:54:07,978 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:54:08] 2025-11-26 19:54:07,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:54:08] 2025-11-26 19:54:08,034 [wrapper] pilotpid: 4058106
[2025-11-26 14:54:08] 2025-11-26 19:54:08,056 [wrapper] Pilot exit status: 0
[2025-11-26 14:54:08] 2025-11-26 19:54:08,105 [wrapper] pandaids: 6895350485
[2025-11-26 14:54:08] 2025-11-26 19:54:08,274 [wrapper] cleanup supervisor_pilot  420189 4058107
[2025-11-26 14:54:08] 2025-11-26 19:54:08,297 [wrapper] Test setup, not cleaning
[2025-11-26 14:54:08] 2025-11-26 19:54:08,313 [wrapper] apfmon messages muted
[2025-11-26 14:54:08] 2025-11-26 19:54:08,342 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:54:08] 2025-11-26 19:54:08,362 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:54:08]  *** Error codes and diagnostics ***
[2025-11-26 14:54:08]     "exeErrorCode": 0,
[2025-11-26 14:54:08]     "exeErrorDiag": "",
[2025-11-26 14:54:08]     "pilotErrorCode": 0,
[2025-11-26 14:54:08]     "pilotErrorDiag": "",
[2025-11-26 14:54:08]  *** Listing of results directory ***
[2025-11-26 14:54:08] total 1316972
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 16:11 pilot3.tar.gz
[2025-11-26 14:54:08] -rwx------. 1 boincer umatlas     36292 Nov 22 16:25 runpilot2-wrapper.sh
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 16:25 queuedata.json
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas       100 Nov 25 20:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:54:08] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 20:13 run_atlas
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas       105 Nov 25 20:13 job.xml
[2025-11-26 14:54:08] -rw-r--r--. 2 boincer umatlas 409701484 Nov 25 20:13 EVNT.47483658._000514.pool.root.1
[2025-11-26 14:54:08] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 20:13 shared
[2025-11-26 14:54:08] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 20:13 input.tar.gz
[2025-11-26 14:54:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:13 start_atlas.sh
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas         0 Nov 25 20:13 boinc_lockfile
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas      2781 Nov 25 20:13 pandaJob.out
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas        57 Nov 25 20:13 setup.sh.local
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas    991877 Nov 25 20:13 agis_schedconf.cvmfs.json
[2025-11-26 14:54:08] drwx------. 5 boincer umatlas      4096 Nov 25 20:13 pilot3
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas       533 Nov 26 14:30 boinc_task_state.xml
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas      6879 Nov 26 14:49 init_data.xml
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas 914165867 Nov 26 14:52 HITS.47556137._005091.pool.root.1
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas      1059 Nov 26 14:52 memory_monitor_summary.json
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas   1516240 Nov 26 14:52 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas   2295186 Nov 26 14:52 log.47556137._005091.job.log.tgz.1
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas      8615 Nov 26 14:53 heartbeat.json
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas        95 Nov 26 14:54 pilot_heartbeat.json
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas      4824 Nov 26 14:54 pilotlog.txt
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas        29 Nov 26 14:54 wrapper_checkpoint.txt
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 14:54 boinc_mmap_file
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas   8096106 Nov 26 14:54 log.47556137._005091.job.log.1
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas       353 Nov 26 14:54 output.list
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas       620 Nov 26 14:54 runtime_log
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas  10414080 Nov 26 14:54 result.tar.gz
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas       661 Nov 26 14:54 XfQODmjHAh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6PKKDmeGydPm.diag
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas      9348 Nov 26 14:54 runtime_log.err
[2025-11-26 14:54:08] -rw-r--r--. 1 boincer umatlas     21345 Nov 26 14:54 stderr.txt
[2025-11-26 14:54:08] HITS file was successfully produced:
[2025-11-26 14:54:08] -rw-------. 1 boincer umatlas 914165867 Nov 26 14:52 shared/HITS.pool.root.1
[2025-11-26 14:54:08]  *** Contents of shared directory: ***
[2025-11-26 14:54:09] total 1303620
[2025-11-26 14:54:09] -rw-r--r--. 2 boincer umatlas 409701484 Nov 25 20:13 ATLAS.root_0
[2025-11-26 14:54:09] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 20:13 input.tar.gz
[2025-11-26 14:54:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 20:13 start_atlas.sh
[2025-11-26 14:54:09] -rw-------. 1 boincer umatlas 914165867 Nov 26 14:52 HITS.pool.root.1
[2025-11-26 14:54:09] -rw-------. 1 boincer umatlas  10414080 Nov 26 14:54 result.tar.gz
14:54:10 (4054392): run_atlas exited; CPU time 252324.782481
14:54:10 (4054392): called boinc_finish(0)

</stderr_txt>
]]>

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