Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:12:00 (4191753): wrapper (7.7.26015): starting
00:12:00 (4191753): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 00:12:00] Arguments: --nthreads 8
[2025-11-25 00:12:00] Threads: 8
[2025-11-25 00:12:00] Checking for CVMFS
[2025-11-25 00:12:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:12:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:12:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:12:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:12:02] 2.13.3.0 9185 28129 301408 153271 3 61 23127454 32935936 27410 16776704 0 157307854 99.779 86411568 31871 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:12:02] CVMFS is ok
[2025-11-25 00:12:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:12:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:12:02] Further information can be found at the LHC@home message board.
[2025-11-25 00:12:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:12:02] Checking for apptainer binary...
[2025-11-25 00:12:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:12:02] Running /usr/bin/apptainer --version
[2025-11-25 00:12:02] apptainer version 1.4.4-1.el9
[2025-11-25 00:12:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:12:03] c-5-6.aglt2.org
[2025-11-25 00:12:03] apptainer works
[2025-11-25 00:12:03] Set ATHENA_PROC_NUMBER=8
[2025-11-25 00:12:03] Set ATHENA_CORE_NUMBER=8
[2025-11-25 00:12:03] Starting ATLAS job with PandaID=6895386713
[2025-11-25 00:12:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:08:54]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:08:54] 2025-11-26 01:07:57,451 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:08:54] 2025-11-26 01:07:57,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:08:54] 2025-11-26 01:07:57,473 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:08:54] 2025-11-26 01:07:57,475 | INFO     | sum of square deviations: 501734732201.2325
[2025-11-25 20:08:54] 2025-11-26 01:07:57,562 | INFO     | sum of deviations: 3372997473718.3594
[2025-11-25 20:08:54] 2025-11-26 01:07:57,562 | INFO     | mean x: 1764083424.2734241
[2025-11-25 20:08:54] 2025-11-26 01:07:57,562 | INFO     | mean y: 2875283.8960817717
[2025-11-25 20:08:54] 2025-11-26 01:07:57,562 | INFO     | intersect: -11856476982.584457
[2025-11-25 20:08:54] 2025-11-26 01:07:57,564 | INFO     | chi2: 12.078931209645576
[2025-11-25 20:08:54] 2025-11-26 01:07:57,574 | INFO     | sum of square deviations: 495351568520.7272
[2025-11-25 20:08:54] 2025-11-26 01:07:57,680 | INFO     | sum of deviations: 3762785821227.238
[2025-11-25 20:08:54] 2025-11-26 01:07:57,680 | INFO     | mean x: 1764083271.7767322
[2025-11-25 20:08:54] 2025-11-26 01:07:57,680 | INFO     | mean y: 2884597.2805816936
[2025-11-25 20:08:54] 2025-11-26 01:07:57,680 | INFO     | intersect: -13397431348.68153
[2025-11-25 20:08:54] 2025-11-26 01:07:57,691 | INFO     | chi2: 9.00625930138798
[2025-11-25 20:08:54] 2025-11-26 01:07:57,691 | INFO     | current chi2=9.00625930138798 (change=25.438276408130616 %)
[2025-11-25 20:08:54] 2025-11-26 01:07:57,693 | INFO     | sum of square deviations: 489022777952.69745
[2025-11-25 20:08:54] 2025-11-26 01:07:57,790 | INFO     | sum of deviations: 4064847107219.0117
[2025-11-25 20:08:54] 2025-11-26 01:07:57,790 | INFO     | mean x: 1764083119.2800686
[2025-11-25 20:08:54] 2025-11-26 01:07:57,791 | INFO     | mean y: 2891869.8496563574
[2025-11-25 20:08:54] 2025-11-26 01:07:57,791 | INFO     | intersect: -14660490875.4692
[2025-11-25 20:08:54] 2025-11-26 01:07:57,801 | INFO     | chi2: 6.8401616371665765
[2025-11-25 20:08:54] 2025-11-26 01:07:57,802 | INFO     | current chi2=6.8401616371665765 (change=24.05102486764488 %)
[2025-11-25 20:08:54] 2025-11-26 01:07:57,802 | INFO     | right removable region: 1163
[2025-11-25 20:08:54] 2025-11-26 01:07:57,803 | INFO     | sum of square deviations: 495351014640.72723
[2025-11-25 20:08:54] 2025-11-26 01:07:57,920 | INFO     | sum of deviations: 2917016073155.6533
[2025-11-25 20:08:54] 2025-11-26 01:07:57,920 | INFO     | mean x: 1764083576.7767322
[2025-11-25 20:08:54] 2025-11-26 01:07:57,920 | INFO     | mean y: 2886174.8990590246
[2025-11-25 20:08:54] 2025-11-26 01:07:57,921 | INFO     | intersect: -10385424327.664219
[2025-11-25 20:08:54] 2025-11-26 01:07:57,922 | INFO     | chi2: 8.175924797557691
[2025-11-25 20:08:54] 2025-11-26 01:07:57,922 | INFO     | current chi2=8.175924797557691 (change=32.31251461198121 %)
[2025-11-25 20:08:54] 2025-11-26 01:07:57,947 | INFO     | sum of square deviations: 489021670192.6973
[2025-11-25 20:08:54] 2025-11-26 01:07:58,081 | INFO     | sum of deviations: 2574941243154.7803
[2025-11-25 20:08:54] 2025-11-26 01:07:58,081 | INFO     | mean x: 1764083729.2800686
[2025-11-25 20:08:54] 2025-11-26 01:07:58,081 | INFO     | mean y: 2894414.72766323
[2025-11-25 20:08:54] 2025-11-26 01:07:58,081 | INFO     | intersect: -9285879943.904785
[2025-11-25 20:08:54] 2025-11-26 01:07:58,083 | INFO     | chi2: 6.090882687088036
[2025-11-25 20:08:54] 2025-11-26 01:07:58,083 | INFO     | current chi2=6.090882687088036 (change=25.502217328277016 %)
[2025-11-25 20:08:54] 2025-11-26 01:07:58,095 | INFO     | sum of square deviations: 482747032715.12177
[2025-11-25 20:08:54] 2025-11-26 01:07:58,219 | INFO     | sum of deviations: 2415695126636.96
[2025-11-25 20:08:54] 2025-11-26 01:07:58,219 | INFO     | mean x: 1764083881.7765315
[2025-11-25 20:08:54] 2025-11-26 01:07:58,227 | INFO     | mean y: 2898280.5867126836
[2025-11-25 20:08:54] 2025-11-26 01:07:58,228 | INFO     | intersect: -8824683345.795162
[2025-11-25 20:08:54] 2025-11-26 01:07:58,229 | INFO     | chi2: 5.62176278854647
[2025-11-25 20:08:54] 2025-11-26 01:07:58,229 | INFO     | current chi2=5.62176278854647 (change=7.7020018713551215 %)
[2025-11-25 20:08:54] 2025-11-26 01:07:58,230 | INFO     | left removable region: 30
[2025-11-25 20:08:54] 2025-11-26 01:07:58,231 | INFO     | sum of square deviations: 450982551362.1573
[2025-11-25 20:08:54] 2025-11-26 01:07:58,336 | INFO     | sum of deviations: 2929178536603.4385
[2025-11-25 20:08:54] 2025-11-26 01:07:58,346 | INFO     | mean x: 1764084003.7740512
[2025-11-25 20:08:54] 2025-11-26 01:07:58,346 | INFO     | mean y: 2921108.314210062
[2025-11-25 20:08:54] 2025-11-26 01:07:58,346 | INFO     | intersect: -11454987817.458939
[2025-11-25 20:08:54] 2025-11-26 01:07:58,347 | INFO     | chi2: 0.13183449078359383
[2025-11-25 20:08:54] 2025-11-26 01:07:58,348 | INFO     | current memory leak: 6.50 B/s (using 1133 data points, chi2=0.13)
[2025-11-25 20:08:54] 2025-11-26 01:07:58,357 | INFO     | could have reported an average CPU frequency of 2600 MHz (43 samples)
[2025-11-25 20:08:54] 2025-11-26 01:07:58,357 | INFO     | ..............................
[2025-11-25 20:08:54] 2025-11-26 01:07:58,357 | INFO     | . Timing measurements:
[2025-11-25 20:08:54] 2025-11-26 01:07:58,357 | INFO     | . get job = 0 s
[2025-11-25 20:08:54] 2025-11-26 01:07:58,357 | INFO     | . initial setup = 4 s
[2025-11-25 20:08:54] 2025-11-26 01:07:58,358 | INFO     | . payload setup = 24 s
[2025-11-25 20:08:54] 2025-11-26 01:07:58,358 | INFO     | . stage-in = 0 s
[2025-11-25 20:08:54] 2025-11-26 01:07:58,358 | INFO     | . payload execution = 71620 s
[2025-11-25 20:08:54] 2025-11-26 01:07:58,358 | INFO     | . stage-out = 8 s
[2025-11-25 20:08:54] 2025-11-26 01:07:58,358 | INFO     | . log creation = 2 s
[2025-11-25 20:08:54] 2025-11-26 01:07:58,358 | INFO     | ..............................
[2025-11-25 20:08:54] 2025-11-26 01:07:58,537 | INFO     | 
[2025-11-25 20:08:54] 2025-11-26 01:07:58,537 | INFO     | job summary report
[2025-11-25 20:08:54] 2025-11-26 01:07:58,537 | INFO     | --------------------------------------------------
[2025-11-25 20:08:54] 2025-11-26 01:07:58,537 | INFO     | PanDA job id: 6895386713
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | task id: 47556149
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | errors: (none)
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | pilot state: finished 
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | transexitcode: 0
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | exeerrorcode: 0
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | exeerrordiag: 
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | exitcode: 0
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | exitmsg: OK
[2025-11-25 20:08:54] 2025-11-26 01:07:58,538 | INFO     | cpuconsumptiontime: 303685 s
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | nevents: 1000
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | neventsw: 0
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | pid: 9363
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | pgrp: 9363
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | corecount: 8
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | event service: False
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284338, 22: 2284628, 23: 2284656, 71649: 2345232, 71659: 2354231, 71660: 2354287, 71678: 2354533}
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | --------------------------------------------------
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | 
[2025-11-25 20:08:54] 2025-11-26 01:07:58,539 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 20:08:54] 2025-11-26 01:07:58,580 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,580 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,580 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,580 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,581 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,582 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:08:54] 2025-11-26 01:07:58,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,582 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:08:54] 2025-11-26 01:07:58,582 | INFO     | job 6895386713 has completed (purged errors)
[2025-11-25 20:08:54] 2025-11-26 01:07:58,582 | INFO     | overall cleanup function is called
[2025-11-25 20:08:54] 2025-11-26 01:07:59,614 | INFO     | --- collectZombieJob: --- 10, [9363]
[2025-11-25 20:08:54] 2025-11-26 01:07:59,615 | INFO     | zombie collector waiting for pid 9363
[2025-11-25 20:08:54] 2025-11-26 01:07:59,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:08:54] 2025-11-26 01:07:59,615 | INFO     | collected zombie processes
[2025-11-25 20:08:54] 2025-11-26 01:07:59,615 | INFO     | will attempt to kill all subprocesses of pid=9363
[2025-11-25 20:08:54] 2025-11-26 01:08:00,438 | INFO     | process IDs to be killed: [9363] (in reverse order)
[2025-11-25 20:08:54] 2025-11-26 01:08:00,688 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:08:54] 2025-11-26 01:08:00,688 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:08:54] 2025-11-26 01:08:00,715 | INFO     | did not find any defunct processes belonging to 9363
[2025-11-25 20:08:54] 2025-11-26 01:08:00,744 | INFO     | did not find any defunct processes belonging to 9363
[2025-11-25 20:08:54] 2025-11-26 01:08:00,746 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:08:54] 2025-11-26 01:08:00,748 | INFO     | ready for new job
[2025-11-25 20:08:54] 2025-11-26 01:08:00,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:08:54] 2025-11-26 01:08:00,753 | INFO     | ***************************************
[2025-11-25 20:08:54] 2025-11-26 01:08:00,753 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:08:54] 2025-11-26 01:08:00,753 | INFO     | ***************************************
[2025-11-25 20:08:54] 2025-11-26 01:08:00,753 | INFO     | 
[2025-11-25 20:08:54] 2025-11-26 01:08:00,755 | INFO     | architecture information:
[2025-11-25 20:08:54] 2025-11-26 01:08:00,759 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:08:54] 2025-11-26 01:08:00,806 | INFO     | cat /etc/os-release:
[2025-11-25 20:08:54] NAME="CentOS Linux"
[2025-11-25 20:08:54] VERSION="7 (Core)"
[2025-11-25 20:08:54] ID="centos"
[2025-11-25 20:08:54] ID_LIKE="rhel fedora"
[2025-11-25 20:08:54] VERSION_ID="7"
[2025-11-25 20:08:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:08:54] ANSI_COLOR="0;31"
[2025-11-25 20:08:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:08:54] HOME_URL="https://www.centos.org/"
[2025-11-25 20:08:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:08:54] 
[2025-11-25 20:08:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:08:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:08:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:08:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:08:54] 
[2025-11-25 20:08:54] 2025-11-26 01:08:00,806 | INFO     | ***************************************
[2025-11-25 20:08:54] 2025-11-26 01:08:01,311 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 20:08:54] 2025-11-26 01:08:01,441 | INFO     | sufficient remaining disk space (71946993664 B)
[2025-11-25 20:08:54] 2025-11-26 01:08:01,441 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:08:54] 2025-11-26 01:08:01,441 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:08:54] 2025-11-26 01:08:01,441 | INFO     | update_server=False
[2025-11-25 20:08:54] 2025-11-26 01:08:01,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:08:54] 2025-11-26 01:08:01,588 | INFO     | all data control threads have been joined
[2025-11-25 20:08:54] 2025-11-26 01:08:01,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:08:54] 2025-11-26 01:08:01,885 | INFO     | aborting loop
[2025-11-25 20:08:54] 2025-11-26 01:08:02,323 | INFO     | all payload control threads have been joined
[2025-11-25 20:08:54] 2025-11-26 01:08:02,425 | INFO     | all job control threads have been joined
[2025-11-25 20:08:54] 2025-11-26 01:08:02,456 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:02,547 | INFO     | [job] validate thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:02,594 | INFO     | [data] control thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:02,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:08:54] 2025-11-26 01:08:02,890 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:03,044 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:03,212 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:03,266 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:03,329 | INFO     | [payload] control thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:03,362 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:03,431 | INFO     | [job] control thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:03,499 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:03,524 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:03,568 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:08:54] 2025-11-26 01:08:03,686 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:04,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:08:54] 2025-11-26 01:08:04,574 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:04,625 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:08,023 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:08:54] 2025-11-26 01:08:31,620 | INFO     | PID=1714 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 20:08:54] 2025-11-26 01:08:31,621 | INFO     | .. there are 44 such processes running
[2025-11-25 20:08:54] 2025-11-26 01:08:31,621 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:08:54] 2025-11-26 01:08:31,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:08:54] 2025-11-26 01:08:31,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:08:54] 2025-11-26 01:08:46,032 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:08:54] 2025-11-26 01:08:47,578 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064989222720)>', '<ExcThread(monitor, started 140064344483584)>']
[2025-11-25 20:08:54] 2025-11-26 01:08:47,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:08:54] 2025-11-26 01:08:47,801 | INFO     | [monitor] control thread has ended
[2025-11-25 20:08:54] 2025-11-26 01:08:52,638 | INFO     | all workflow threads have been joined
[2025-11-25 20:08:54] 2025-11-26 01:08:52,638 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:08:54] 2025-11-26 01:08:52,638 | INFO     | traces error code: 0
[2025-11-25 20:08:54] 2025-11-26 01:08:52,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:08:54] 2025-11-26 01:08:53,037 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:08:54] 2025-11-26 01:08:53,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:08:54] 2025-11-26 01:08:53,059 [wrapper] pilotpid: 1714
[2025-11-25 20:08:54] 2025-11-26 01:08:53,084 [wrapper] Pilot exit status: 0
[2025-11-25 20:08:54] 2025-11-26 01:08:53,180 [wrapper] pandaids: 6895386713
[2025-11-25 20:08:54] 2025-11-26 01:08:53,487 [wrapper] cleanup supervisor_pilot 3823055 1715
[2025-11-25 20:08:54] 2025-11-26 01:08:53,543 [wrapper] Test setup, not cleaning
[2025-11-25 20:08:54] 2025-11-26 01:08:53,582 [wrapper] apfmon messages muted
[2025-11-25 20:08:54] 2025-11-26 01:08:53,599 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:08:54] 2025-11-26 01:08:53,624 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:08:54]  *** Error codes and diagnostics ***
[2025-11-25 20:08:54]     "exeErrorCode": 0,
[2025-11-25 20:08:54]     "exeErrorDiag": "",
[2025-11-25 20:08:54]     "pilotErrorCode": 0,
[2025-11-25 20:08:54]     "pilotErrorDiag": "",
[2025-11-25 20:08:54]  *** Listing of results directory ***
[2025-11-25 20:08:54] total 1324584
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 00:37 pilot3.tar.gz
[2025-11-25 20:08:54] -rwx------. 1 boincer umatlas     36292 Nov 24 00:52 runpilot2-wrapper.sh
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 00:52 queuedata.json
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:08:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:11 run_atlas
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:11 job.xml
[2025-11-25 20:08:54] -rw-r--r--. 2 boincer umatlas 408424763 Nov 25 00:12 EVNT.47483658._001251.pool.root.1
[2025-11-25 20:08:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:12 start_atlas.sh
[2025-11-25 20:08:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:12 shared
[2025-11-25 20:08:54] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 00:12 input.tar.gz
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:12 boinc_lockfile
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 00:12 pandaJob.out
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas        57 Nov 25 00:12 setup.sh.local
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas    991801 Nov 25 00:12 agis_schedconf.cvmfs.json
[2025-11-25 20:08:54] drwx------. 5 boincer umatlas      4096 Nov 25 00:12 pilot3
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas       533 Nov 25 19:53 boinc_task_state.xml
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas      6660 Nov 25 20:04 init_data.xml
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas 919882830 Nov 25 20:06 HITS.47556149._002373.pool.root.1
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas      1066 Nov 25 20:07 memory_monitor_summary.json
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas   1516240 Nov 25 20:07 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas   2326118 Nov 25 20:07 log.47556149._002373.job.log.tgz.1
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas      8641 Nov 25 20:07 heartbeat.json
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas        95 Nov 25 20:08 pilot_heartbeat.json
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 20:08 boinc_mmap_file
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas      4821 Nov 25 20:08 pilotlog.txt
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas        29 Nov 25 20:08 wrapper_checkpoint.txt
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas   9747763 Nov 25 20:08 log.47556149._002373.job.log.1
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas       353 Nov 25 20:08 output.list
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas       620 Nov 25 20:08 runtime_log
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas  12093440 Nov 25 20:08 result.tar.gz
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas      9328 Nov 25 20:08 runtime_log.err
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas       659 Nov 25 20:08 ceZNDmofeh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrULKDm26PBYo.diag
[2025-11-25 20:08:54] -rw-r--r--. 1 boincer umatlas     21112 Nov 25 20:08 stderr.txt
[2025-11-25 20:08:54] HITS file was successfully produced:
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas 919882830 Nov 25 20:06 shared/HITS.pool.root.1
[2025-11-25 20:08:54]  *** Contents of shared directory: ***
[2025-11-25 20:08:54] total 1309592
[2025-11-25 20:08:54] -rw-r--r--. 2 boincer umatlas 408424763 Nov 25 00:12 ATLAS.root_0
[2025-11-25 20:08:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:12 start_atlas.sh
[2025-11-25 20:08:54] -rw-r--r--. 2 boincer umatlas    590104 Nov 25 00:12 input.tar.gz
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas 919882830 Nov 25 20:06 HITS.pool.root.1
[2025-11-25 20:08:54] -rw-------. 1 boincer umatlas  12093440 Nov 25 20:08 result.tar.gz
20:08:55 (4191753): run_atlas exited; CPU time 306127.940500
20:08:55 (4191753): called boinc_finish(0)

</stderr_txt>
]]>

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