Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:40:15 (776624): wrapper (7.7.26015): starting
17:40:15 (776624): wrapper: running run_atlas (--nthreads 8)
[2025-11-25 17:40:15] Arguments: --nthreads 8
[2025-11-25 17:40:15] Threads: 8
[2025-11-25 17:40:15] Checking for CVMFS
[2025-11-25 17:40:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 17:40:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 17:40:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 17:40:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 17:40:16] 2.13.3.0 9330 29176 311272 153300 0 358 23884612 32935937 23648 16776704 0 153687110 99.770 93228212 33332 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 17:40:16] CVMFS is ok
[2025-11-25 17:40:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:40:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:40:16] Further information can be found at the LHC@home message board.
[2025-11-25 17:40:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:40:16] Checking for apptainer binary...
[2025-11-25 17:40:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 17:40:16] Running /usr/bin/apptainer --version
[2025-11-25 17:40:16] apptainer version 1.4.4-1.el9
[2025-11-25 17:40:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:40:36] c-5-5.aglt2.org
[2025-11-25 17:40:36] apptainer works
[2025-11-25 17:40:36] Set ATHENA_PROC_NUMBER=8
[2025-11-25 17:40:36] Set ATHENA_CORE_NUMBER=8
[2025-11-25 17:40:36] Starting ATLAS job with PandaID=6895353317
[2025-11-25 17:40:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:35:02]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:35:02] 2025-11-26 16:34:20,169 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:35:02] 2025-11-26 16:34:20,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:35:02] 2025-11-26 16:34:20,217 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:35:02] 2025-11-26 16:34:20,218 | INFO     | sum of square deviations: 364131670585.31793
[2025-11-26 11:35:02] 2025-11-26 16:34:20,286 | INFO     | sum of deviations: 1402806671806.4324
[2025-11-26 11:35:02] 2025-11-26 16:34:20,286 | INFO     | mean x: 1764142648.8947868
[2025-11-26 11:35:02] 2025-11-26 16:34:20,286 | INFO     | mean y: 2980931.7696682466
[2025-11-26 11:35:02] 2025-11-26 16:34:20,286 | INFO     | intersect: -6793327320.983733
[2025-11-26 11:35:02] 2025-11-26 16:34:20,292 | INFO     | chi2: 10.893492849399335
[2025-11-26 11:35:02] 2025-11-26 16:34:20,293 | INFO     | sum of square deviations: 358979820864.7851
[2025-11-26 11:35:02] 2025-11-26 16:34:20,409 | INFO     | sum of deviations: 1769553926915.988
[2025-11-26 11:35:02] 2025-11-26 16:34:20,425 | INFO     | mean x: 1764142496.4038095
[2025-11-26 11:35:02] 2025-11-26 16:34:20,425 | INFO     | mean y: 2991786.2523809522
[2025-11-26 11:35:02] 2025-11-26 16:34:20,426 | INFO     | intersect: -8693166328.23558
[2025-11-26 11:35:02] 2025-11-26 16:34:20,427 | INFO     | chi2: 7.669086255095623
[2025-11-26 11:35:02] 2025-11-26 16:34:20,427 | INFO     | current chi2=7.669086255095623 (change=29.59938229987919 %)
[2025-11-26 11:35:02] 2025-11-26 16:34:20,429 | INFO     | sum of square deviations: 353876809269.07513
[2025-11-26 11:35:02] 2025-11-26 16:34:20,575 | INFO     | sum of deviations: 2191031543523.4238
[2025-11-26 11:35:02] 2025-11-26 16:34:20,575 | INFO     | mean x: 1764142343.9129186
[2025-11-26 11:35:02] 2025-11-26 16:34:20,575 | INFO     | mean y: 3004381.2354066987
[2025-11-26 11:35:02] 2025-11-26 16:34:20,575 | INFO     | intersect: -10919699287.20285
[2025-11-26 11:35:02] 2025-11-26 16:34:20,577 | INFO     | chi2: 3.624964639313605
[2025-11-26 11:35:02] 2025-11-26 16:34:20,577 | INFO     | current chi2=3.624964639313605 (change=52.73276999714216 %)
[2025-11-26 11:35:02] 2025-11-26 16:34:20,582 | INFO     | sum of square deviations: 348822275993.37616
[2025-11-26 11:35:02] 2025-11-26 16:34:20,636 | INFO     | sum of deviations: 2376012150709.8716
[2025-11-26 11:35:02] 2025-11-26 16:34:20,636 | INFO     | mean x: 1764142191.4201922
[2025-11-26 11:35:02] 2025-11-26 16:34:20,637 | INFO     | mean y: 3009960.968269231
[2025-11-26 11:35:02] 2025-11-26 16:34:20,637 | INFO     | intersect: -12013491194.118261
[2025-11-26 11:35:02] 2025-11-26 16:34:20,638 | INFO     | chi2: 2.708824677274827
[2025-11-26 11:35:02] 2025-11-26 16:34:20,638 | INFO     | current chi2=2.708824677274827 (change=25.273073069541756 %)
[2025-11-26 11:35:02] 2025-11-26 16:34:20,640 | INFO     | sum of square deviations: 343815355651.6869
[2025-11-26 11:35:02] 2025-11-26 16:34:20,714 | INFO     | sum of deviations: 2409892314820.9624
[2025-11-26 11:35:02] 2025-11-26 16:34:20,714 | INFO     | mean x: 1764142038.915942
[2025-11-26 11:35:02] 2025-11-26 16:34:20,714 | INFO     | mean y: 3010989.723671498
[2025-11-26 11:35:02] 2025-11-26 16:34:20,714 | INFO     | intersect: -12362324856.83206
[2025-11-26 11:35:02] 2025-11-26 16:34:20,716 | INFO     | chi2: 2.58892052592861
[2025-11-26 11:35:02] 2025-11-26 16:34:20,716 | INFO     | current chi2=2.58892052592861 (change=4.426427164228462 %)
[2025-11-26 11:35:02] 2025-11-26 16:34:20,716 | INFO     | right removable region: 1034
[2025-11-26 11:35:02] 2025-11-26 16:34:20,728 | INFO     | sum of square deviations: 358978793810.1986
[2025-11-26 11:35:02] 2025-11-26 16:34:20,766 | INFO     | sum of deviations: 1104113193875.7927
[2025-11-26 11:35:02] 2025-11-26 16:34:20,766 | INFO     | mean x: 1764142801.4009523
[2025-11-26 11:35:02] 2025-11-26 16:34:20,766 | INFO     | mean y: 2989762.4066666667
[2025-11-26 11:35:02] 2025-11-26 16:34:20,767 | INFO     | intersect: -5422994659.21812
[2025-11-26 11:35:02] 2025-11-26 16:34:20,768 | INFO     | chi2: 8.745935045720849
[2025-11-26 11:35:02] 2025-11-26 16:34:20,768 | INFO     | current chi2=8.745935045720849 (change=19.71413423929408 %)
[2025-11-26 11:35:02] 2025-11-26 16:34:20,768 | INFO     | left removable region: 10
[2025-11-26 11:35:02] 2025-11-26 16:34:20,769 | INFO     | sum of square deviations: 332969095322.6507
[2025-11-26 11:35:02] 2025-11-26 16:34:20,794 | INFO     | sum of deviations: 2030202663904.675
[2025-11-26 11:35:02] 2025-11-26 16:34:20,795 | INFO     | mean x: 1764142313.4277344
[2025-11-26 11:35:02] 2025-11-26 16:34:20,795 | INFO     | mean y: 3022444.49609375
[2025-11-26 11:35:02] 2025-11-26 16:34:20,795 | INFO     | intersect: -10753430555.315691
[2025-11-26 11:35:02] 2025-11-26 16:34:20,796 | INFO     | chi2: 0.3396274192100639
[2025-11-26 11:35:02] 2025-11-26 16:34:20,796 | INFO     | current memory leak: 6.10 B/s (using 1024 data points, chi2=0.34)
[2025-11-26 11:35:02] 2025-11-26 16:34:20,798 | INFO     | could have reported an average CPU frequency of 2600 MHz (39 samples)
[2025-11-26 11:35:02] 2025-11-26 16:34:20,798 | INFO     | ..............................
[2025-11-26 11:35:02] 2025-11-26 16:34:20,798 | INFO     | . Timing measurements:
[2025-11-26 11:35:02] 2025-11-26 16:34:20,798 | INFO     | . get job = 0 s
[2025-11-26 11:35:02] 2025-11-26 16:34:20,798 | INFO     | . initial setup = 3 s
[2025-11-26 11:35:02] 2025-11-26 16:34:20,798 | INFO     | . payload setup = 10 s
[2025-11-26 11:35:02] 2025-11-26 16:34:20,798 | INFO     | . stage-in = 0 s
[2025-11-26 11:35:02] 2025-11-26 16:34:20,798 | INFO     | . payload execution = 64336 s
[2025-11-26 11:35:02] 2025-11-26 16:34:20,799 | INFO     | . stage-out = 7 s
[2025-11-26 11:35:02] 2025-11-26 16:34:20,799 | INFO     | . log creation = 1 s
[2025-11-26 11:35:02] 2025-11-26 16:34:20,799 | INFO     | ..............................
[2025-11-26 11:35:02] 2025-11-26 16:34:21,154 | INFO     | 
[2025-11-26 11:35:02] 2025-11-26 16:34:21,155 | INFO     | job summary report
[2025-11-26 11:35:02] 2025-11-26 16:34:21,155 | INFO     | --------------------------------------------------
[2025-11-26 11:35:02] 2025-11-26 16:34:21,155 | INFO     | PanDA job id: 6895353317
[2025-11-26 11:35:02] 2025-11-26 16:34:21,155 | INFO     | task id: 47556137
[2025-11-26 11:35:02] 2025-11-26 16:34:21,155 | INFO     | errors: (none)
[2025-11-26 11:35:02] 2025-11-26 16:34:21,155 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:35:02] 2025-11-26 16:34:21,155 | INFO     | pilot state: finished 
[2025-11-26 11:35:02] 2025-11-26 16:34:21,156 | INFO     | transexitcode: 0
[2025-11-26 11:35:02] 2025-11-26 16:34:21,156 | INFO     | exeerrorcode: 0
[2025-11-26 11:35:02] 2025-11-26 16:34:21,156 | INFO     | exeerrordiag: 
[2025-11-26 11:35:02] 2025-11-26 16:34:21,156 | INFO     | exitcode: 0
[2025-11-26 11:35:02] 2025-11-26 16:34:21,156 | INFO     | exitmsg: OK
[2025-11-26 11:35:02] 2025-11-26 16:34:21,156 | INFO     | cpuconsumptiontime: 291527 s
[2025-11-26 11:35:02] 2025-11-26 16:34:21,156 | INFO     | nevents: 1000
[2025-11-26 11:35:02] 2025-11-26 16:34:21,156 | INFO     | neventsw: 0
[2025-11-26 11:35:02] 2025-11-26 16:34:21,157 | INFO     | pid: 788195
[2025-11-26 11:35:02] 2025-11-26 16:34:21,157 | INFO     | pgrp: 788195
[2025-11-26 11:35:02] 2025-11-26 16:34:21,157 | INFO     | corecount: 8
[2025-11-26 11:35:02] 2025-11-26 16:34:21,157 | INFO     | event service: False
[2025-11-26 11:35:02] 2025-11-26 16:34:21,157 | INFO     | sizes: {0: 2283487, 1: 2284343, 10: 2284605, 12: 2284633, 64349: 2339432, 64350: 2339431, 64358: 2348665, 64383: 2348855}
[2025-11-26 11:35:02] 2025-11-26 16:34:21,157 | INFO     | --------------------------------------------------
[2025-11-26 11:35:02] 2025-11-26 16:34:21,157 | INFO     | 
[2025-11-26 11:35:02] 2025-11-26 16:34:21,157 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 11:35:02] 2025-11-26 16:34:21,238 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,239 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,239 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,239 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,239 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,239 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,239 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,239 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,239 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,239 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,240 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:35:02] 2025-11-26 16:34:21,241 | INFO     | job 6895353317 has completed (purged errors)
[2025-11-26 11:35:02] 2025-11-26 16:34:21,241 | INFO     | overall cleanup function is called
[2025-11-26 11:35:02] 2025-11-26 16:34:22,347 | INFO     | --- collectZombieJob: --- 10, [788195]
[2025-11-26 11:35:02] 2025-11-26 16:34:22,347 | INFO     | zombie collector waiting for pid 788195
[2025-11-26 11:35:02] 2025-11-26 16:34:22,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:35:02] 2025-11-26 16:34:22,348 | INFO     | collected zombie processes
[2025-11-26 11:35:02] 2025-11-26 16:34:22,348 | INFO     | will attempt to kill all subprocesses of pid=788195
[2025-11-26 11:35:02] 2025-11-26 16:34:24,432 | INFO     | process IDs to be killed: [788195] (in reverse order)
[2025-11-26 11:35:02] 2025-11-26 16:34:24,787 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:35:02] 2025-11-26 16:34:24,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:35:02] 2025-11-26 16:34:24,830 | INFO     | did not find any defunct processes belonging to 788195
[2025-11-26 11:35:02] 2025-11-26 16:34:24,889 | INFO     | did not find any defunct processes belonging to 788195
[2025-11-26 11:35:02] 2025-11-26 16:34:24,898 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:35:02] 2025-11-26 16:34:24,899 | INFO     | ready for new job
[2025-11-26 11:35:02] 2025-11-26 16:34:24,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:35:02] 2025-11-26 16:34:24,910 | INFO     | ***************************************
[2025-11-26 11:35:02] 2025-11-26 16:34:24,911 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:35:02] 2025-11-26 16:34:24,911 | INFO     | ***************************************
[2025-11-26 11:35:02] 2025-11-26 16:34:24,911 | INFO     | 
[2025-11-26 11:35:02] 2025-11-26 16:34:24,912 | INFO     | architecture information:
[2025-11-26 11:35:02] 2025-11-26 16:34:24,931 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:35:02] 2025-11-26 16:34:24,986 | INFO     | cat /etc/os-release:
[2025-11-26 11:35:02] NAME="CentOS Linux"
[2025-11-26 11:35:02] VERSION="7 (Core)"
[2025-11-26 11:35:02] ID="centos"
[2025-11-26 11:35:02] ID_LIKE="rhel fedora"
[2025-11-26 11:35:02] VERSION_ID="7"
[2025-11-26 11:35:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:35:02] ANSI_COLOR="0;31"
[2025-11-26 11:35:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:35:02] HOME_URL="https://www.centos.org/"
[2025-11-26 11:35:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:35:02] 
[2025-11-26 11:35:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:35:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:35:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:35:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:35:02] 
[2025-11-26 11:35:02] 2025-11-26 16:34:24,987 | INFO     | ***************************************
[2025-11-26 11:35:02] 2025-11-26 16:34:25,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 11:35:02] 2025-11-26 16:34:25,543 | INFO     | sufficient remaining disk space (69988253696 B)
[2025-11-26 11:35:02] 2025-11-26 16:34:25,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:35:02] 2025-11-26 16:34:25,543 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:35:02] 2025-11-26 16:34:25,543 | INFO     | update_server=False
[2025-11-26 11:35:02] 2025-11-26 16:34:25,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:35:02] 2025-11-26 16:34:25,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:35:02] 2025-11-26 16:34:25,544 | INFO     | aborting loop
[2025-11-26 11:35:02] 2025-11-26 16:34:25,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:35:02] 2025-11-26 16:34:25,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:35:02] 2025-11-26 16:34:26,496 | INFO     | all data control threads have been joined
[2025-11-26 11:35:02] 2025-11-26 16:34:26,542 | INFO     | all payload control threads have been joined
[2025-11-26 11:35:02] 2025-11-26 16:34:26,551 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:26,552 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:26,764 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:35:02] 2025-11-26 16:34:26,781 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:26,916 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:27,051 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:27,107 | INFO     | all job control threads have been joined
[2025-11-26 11:35:02] 2025-11-26 16:34:27,502 | INFO     | [data] control thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:27,547 | INFO     | [payload] control thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:27,577 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:27,689 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:27,715 | INFO     | [job] validate thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:27,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:27,756 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:27,790 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:28,114 | INFO     | [job] control thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:28,771 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:29,554 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:35:02] 2025-11-26 16:34:53,816 | INFO     | PID=781469 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 11:35:02] 2025-11-26 16:34:53,816 | INFO     | .. there are 45 such processes running
[2025-11-26 11:35:02] 2025-11-26 16:34:53,824 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:35:02] 2025-11-26 16:34:53,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:35:02] 2025-11-26 16:34:53,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:35:02] 2025-11-26 16:34:55,328 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:35:02] 2025-11-26 16:34:56,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884323305280)>', '<ExcThread(monitor, started 139883838424832)>']
[2025-11-26 11:35:02] 2025-11-26 16:34:56,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:35:02] 2025-11-26 16:34:56,841 | INFO     | [monitor] control thread has ended
[2025-11-26 11:35:02] 2025-11-26 16:35:01,597 | INFO     | all workflow threads have been joined
[2025-11-26 11:35:02] 2025-11-26 16:35:01,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:35:02] 2025-11-26 16:35:01,598 | INFO     | traces error code: 0
[2025-11-26 11:35:02] 2025-11-26 16:35:01,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:35:02] 2025-11-26 16:35:01,798 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:35:02] 2025-11-26 16:35:01,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:35:02] 2025-11-26 16:35:01,807 [wrapper] pilotpid: 781469
[2025-11-26 11:35:02] 2025-11-26 16:35:01,895 [wrapper] Pilot exit status: 0
[2025-11-26 11:35:02] 2025-11-26 16:35:01,979 [wrapper] pandaids: 6895353317
[2025-11-26 11:35:02] 2025-11-26 16:35:02,082 [wrapper] cleanup supervisor_pilot  644259 781470
[2025-11-26 11:35:02] 2025-11-26 16:35:02,087 [wrapper] Test setup, not cleaning
[2025-11-26 11:35:02] 2025-11-26 16:35:02,092 [wrapper] apfmon messages muted
[2025-11-26 11:35:02] 2025-11-26 16:35:02,116 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:35:02] 2025-11-26 16:35:02,127 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:35:02]  *** Error codes and diagnostics ***
[2025-11-26 11:35:02]     "exeErrorCode": 0,
[2025-11-26 11:35:02]     "exeErrorDiag": "",
[2025-11-26 11:35:02]     "pilotErrorCode": 0,
[2025-11-26 11:35:02]     "pilotErrorDiag": "",
[2025-11-26 11:35:02]  *** Listing of results directory ***
[2025-11-26 11:35:02] total 1328616
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 23:55 pilot3.tar.gz
[2025-11-26 11:35:02] -rwx------. 1 boincer umatlas     36292 Nov 23 00:02 runpilot2-wrapper.sh
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 00:02 queuedata.json
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas       100 Nov 25 17:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:35:02] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 17:40 run_atlas
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas       105 Nov 25 17:40 job.xml
[2025-11-26 11:35:02] -rw-r--r--. 2 boincer umatlas 410014020 Nov 25 17:40 EVNT.47483658._000614.pool.root.1
[2025-11-26 11:35:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:40 start_atlas.sh
[2025-11-26 11:35:02] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 17:40 shared
[2025-11-26 11:35:02] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 17:40 input.tar.gz
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas         0 Nov 25 17:40 boinc_lockfile
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas      2786 Nov 25 17:40 pandaJob.out
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas        57 Nov 25 17:40 setup.sh.local
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas    991877 Nov 25 17:40 agis_schedconf.cvmfs.json
[2025-11-26 11:35:02] drwx------. 5 boincer umatlas      4096 Nov 25 17:40 pilot3
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas       533 Nov 26 11:14 boinc_task_state.xml
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas      6660 Nov 26 11:31 init_data.xml
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas 925918662 Nov 26 11:32 HITS.47556137._006098.pool.root.1
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas      1057 Nov 26 11:33 memory_monitor_summary.json
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas   1516240 Nov 26 11:33 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas   2177004 Nov 26 11:33 log.47556137._006098.job.log.tgz.1
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas      8613 Nov 26 11:34 heartbeat.json
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas        95 Nov 26 11:34 pilot_heartbeat.json
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 11:35 boinc_mmap_file
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas        29 Nov 26 11:35 wrapper_checkpoint.txt
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas      4823 Nov 26 11:35 pilotlog.txt
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas   8148029 Nov 26 11:35 log.47556137._006098.job.log.1
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas       353 Nov 26 11:35 output.list
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas       620 Nov 26 11:35 runtime_log
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas  10342400 Nov 26 11:35 result.tar.gz
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas       657 Nov 26 11:35 ZumNDmWQHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYcKKDmcBo9Cn.diag
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas      9328 Nov 26 11:35 runtime_log.err
[2025-11-26 11:35:02] -rw-r--r--. 1 boincer umatlas     21112 Nov 26 11:35 stderr.txt
[2025-11-26 11:35:02] HITS file was successfully produced:
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas 925918662 Nov 26 11:32 shared/HITS.pool.root.1
[2025-11-26 11:35:02]  *** Contents of shared directory: ***
[2025-11-26 11:35:02] total 1315328
[2025-11-26 11:35:02] -rw-r--r--. 2 boincer umatlas 410014020 Nov 25 17:40 ATLAS.root_0
[2025-11-26 11:35:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 17:40 start_atlas.sh
[2025-11-26 11:35:02] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 17:40 input.tar.gz
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas 925918662 Nov 26 11:32 HITS.pool.root.1
[2025-11-26 11:35:02] -rw-------. 1 boincer umatlas  10342400 Nov 26 11:35 result.tar.gz
11:35:04 (776624): run_atlas exited; CPU time 293621.586119
11:35:04 (776624): called boinc_finish(0)

</stderr_txt>
]]>

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